Pregenerated sensors for TNPO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012535Ensembl transcript IDs: ENSMUST00000012679.15, ENSMUST00000115251.8, ENSMUST00000170350.8, ENSMUST00000170647.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTaGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: AVSPSHPKQGLLRMP*RVKSLPVWRDGLVV Trigger: TACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 ENSMUST00000170647.2 |
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| 3UTR CCA 90 bp | TCAATGCTAGTGTACCGCACAGCTGTATGCACGGTCTCTGGGAGATaGACAACTCCCTCTAGTACCTCCACAAGTGTAGGGTTGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SMLVYRTAVCTVSGR*TTPSSTSTSVGLFS Trigger: GGAGAACAACCCTACACTTGTGGAGGTACTAGAGGGAGTTGTCCATCTCCCAGAGACCGTGCATACAGCTGTGCGGTACACTAGCATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR GCA 90 bp | CCCAAGCGTGAACACTTCAAGGACTTTCTAGGCACAGATGCCAGGTaGTACCCACTGAAATCCAGGCTTGGACTAAGCTCCACATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PKREHFKDFLGTDAR*YPLKSRLGLSSTFS Trigger: TGAGAATGTGGAGCTTAGTCCAAGCCTGGATTTCAGTGGGTAGCACCTGGCATCTGTGCCTAGAAAGTCCTTGAAGTGTTCACGCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CCA 90 bp | CTTTCTAGGCACAGATGCCAGGTGCTACCCACTGAAATCCAGGCTTaGACTAAGCTCCACATTCTCAAAGGGCCATCTCAACTGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LSRHRCQVLPTEIQA*TKLHILKGPSQLKP Trigger: AGGCTTCAGTTGAGATGGCCCTTTGAGAATGTGGAGCTTAGTCCAAGCCTGGATTTCAGTGGGTAGCACCTGGCATCTGTGCCTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CCA 90 bp | AGTGCTGAGCCATATGATCGCGACAAACGGAACAAATGTTATGAATaGCTTTGGCTGCAGCAGAAGCCAGAGGCTTTTCACACAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SAEPYDRDKRNKCYE*LWLQQKPEAFHTGL Trigger: AAGGCCTGTGTGAAAAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATGGCTCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR TCA 90 bp | ACACTCCATAGATCCAATCAGGAAGATCAAGTCCTTCACCAGGTCTaGCACTCTCATTCGAAACTCCCCAAAGTCATCGGTCTCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: TLHRSNQEDQVLHQV*HSHSKLPKVIGLFR Trigger: CCTGAAGAGACCGATGACTTTGGGGAGTTTCGAATGAGAGTGTCAGACCTGGTGAAGGACTTGATCTTCCTGATTGGATCTATGGAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR GCA 90 bp | GTCTCAGTGTGTGCACTGCATGCTGGTGTGTGTCTATCATGTGTGTaGATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: VSVCALHAGVCLSCV*IICYQVHISVLVSS Trigger: AGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACACACATGATAGACACACACCAGCATGCAGTGCACACACTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR CCA 90 bp | TATAGCAGCCATGATAAAGAGAACCGCTTCTGTCACCTCCCAGGGTaGGTTGCCTTCCTTCAGAGTAGAATACAACTGAGCAAAACACTC | + |
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Preference number: 1 (lower is better) Translates to: YSSHDKENRFCHLPG*VAFLQSRIQLSKTL Trigger: GAGTGTTTTGCTCAGTTGTATTCTACTCTGAAGGAAGGCAACCCACCCTGGGAGGTGACAGAAGCGGTTCTCTTTATCATGGCTGCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CCA 90 bp | GAGCCATATGATCGCGACAAACGGAACAAATGTTATGAATGGCTTTaGCTGCAGCAGAAGCCAGAGGCTTTTCACACAGGCCTTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: EPYDRDKRNKCYEWL*LQQKPEAFHTGLSS Trigger: TGATGAAAGGCCTGTGTGAAAAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR GCA 90 bp | ATTCAGAACTTTGTCCAAATCTTCCCGTGCCACAGCCATATGATATaGAGTCTCCAATGTCAGGACTCCCTGAAAAAGCTGCATGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: IQNFVQIFPCHSHMI*SLQCQDSLKKLHGQ Trigger: TTGGCCATGCAGCTTTTTCAGGGAGTCCTGACATTGGAGACTGCATATCATATGGCTGTGGCACGGGAAGATTTGGACAAAGTTCTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR GCA 90 bp | CGCAGGCATCTACAACAACGCTCTACAATTCGATTGTCGGCTCGGTaGTTATTTAGAGTCTCAGACAAAACTGGCCATATTTCCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: RRHLQQRSTIRLSAR*LFRVSDKTGHISWM Trigger: CATCCAGGAAATATGGCCAGTTTTGTCTGAGACTCTAAATAAGCACCGAGCCGACAATCGAATTGTAGAGCGTTGTTGTAGATGCCTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR GCA 90 bp | CATATGATCGCGACAAACGGAACAAATGTTATGAATGGCTTTGGCTaGAGCAGAAGCCAGAGGCTTTTCACACAGGCCTTTCATCAAATA | + |
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Preference number: 1 (lower is better) Translates to: HMIATNGTNVMNGFG*SRSQRLFTQAFHQI Trigger: TATTTGATGAAAGGCCTGTGTGAAAAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGCCCTGTGTGGCGGGATaGTCTGGTGGTAGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRPCVAG*SGGSEG Trigger: GCCTTCACTACCACCAGACCATCCCGCCACACAGGG...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTCCAACTGGCAGTGTCGAGCCAAGGCATGAAGCAGCCTCTGAATGTACGGGCACAGATGCCAGGTaGTACCCACTGAAATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LVPTGSVEPRHEAASECTGTDAR*YPLKSR Trigger: CCTGGATTTCAGTGGGTAGCACCTGGCATCTGTGCC...CGTACATTCAGAGGCTGCTTCATGCCTTGGCTCGACACTGCCAGTTGGAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTCCAACTGGCAGTGTCGAGCCAAGGCATGAAGCAGCCTCTGAATGTACGCTTTCTAGGCACAGATaGCAGGTGCTACCCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LVPTGSVEPRHEAASECTLSRHR*QVLPTE Trigger: TTCAGTGGGTAGCACCTGGCATCTGTGCCTAGAAAG...CGTACATTCAGAGGCTGCTTCATGCCTTGGCTCGACACTGCCAGTTGGAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTCCAACTGGCAGTGTCGAGCCAAGGCATGAAGCAGCCTCTGAATGTACGCCAGCTGTGTTACAATaGCAGGCGACAAGTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVPTGSVEPRHEAASECTPAVLQ*QATSLS Trigger: TGAAAGACTTGTCGCCTGTCATTGTAACACAGCTGG...CGTACATTCAGAGGCTGCTTCATGCCTTGGCTCGACACTGCCAGTTGGAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCCCCTGTGTGGCGGGATaGTCTGGTGGTAGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RERARFNPYLSSPPTSFGPCVAG*SGGSEG Trigger: GCCTTCACTACCACCAGACCATCCCGCCACACAGGG...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATTCCAAAGTTCGAAGATCTCCCAGACCTTGGCCTGGAGTACAGACAATTTCCCTGTGTGGCGGGATaGTCTGGTGGTAGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: AIPKFEDLPDLGLEYRQFPCVAG*SGGSEG Trigger: GCCTTCACTACCACCAGACCATCCCGCCACACAGGG...AAATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTTCGAACTTTGGAATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTAAGTCTCTCCCTGTGTaGCGGGATGGTCTGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPKSLPV*RDGLVV Trigger: TACCACCAGACCATCCCGCCACACAGGGAGAGACTT...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCATTCGAAACTCCCCAAAGTCATCGGTCTCTTCAGGAACTCCCTCATGGTCCCTTAAAGAAGCATaGGAGTCTGTGGGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TLIRNSPKSSVSSGTPSWSLKEA*ESVGSS Trigger: TGAGCTCCCCACAGACTCTCATGCTTCTTTAAGGGA...CCATGAGGGAGTTCCTGAAGAGACCGATGACTTTGGGGAGTTTCGAATGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGCCAGAGGCTTTTCACACAGGCCTTTCATCAAATAGCCCAATACAGGGTATCTCAACTGAAGCCTaGGGCTCAGAGTCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QKPEAFHTGLSSNSPIQGISTEA*GSESAG Trigger: TCCTGCTGACTCTGAGCCCCAGGCTTCAGTTGAGAT...ACCCTGTATTGGGCTATTTGATGAAAGGCCTGTGTGAAAAGCCTCTGGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CAA 90 bp | AGGCCCATGAACTGGATTGGACTTAGCAACTCAATAGGATCAGGGTaGGGCTCTACATTAAAAGCAACTTTGACCCTGGCTAGTCCGGAC | + |
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Preference number: 2 (lower is better) Translates to: RPMNWIGLSNSIGSG*GSTLKATLTLASPD Trigger: GTCCGGACTAGCCAGGGTCAAAGTTGCTTTTAATGTAGAGCCCAACCCTGATCCTATTGAGTTGCTAAGTCCAATCCAGTTCATGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR CCA 90 bp | CCATATGATCGCGACAAACGGAACAAATGTTATGAATGGCTTTGGCTGCAGCAGAACTCCCTCATGGTCTaGTTCCAACTGGCAGTGTCG | + |
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Preference number: 2 (lower is better) Translates to: PYDRDKRNKCYEWLWLQQNSLMV*FQLAVS Trigger: CGACACTGCCAGTTGGAACCAGACCATGAGGGAGTT...CTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCTTTCAAGGAATTCTCTAGCCACCGACAGAAAGTCGGTCTGTCAACCTGCAGTTGCTGGCCAAGCTaGCTCATCACCTGTCCAATT | + |
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Preference number: 2 (lower is better) Translates to: KPFKEFSSHRQKVGLSTCSCWPS*LITCPI Trigger: AATTGGACAGGTGATGAGCCAGCTTGGCCAGCAACT...GCAGGTTGACAGACCGACTTTCTGTCGGTGGCTAGAGAATTCCTTGAAAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGGAGAGCAGAGGAGGTaGCCCTACCTCTTTAATTCC | + |
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Preference number: 2 (lower is better) Translates to: REREQGLIHICPLHPPVLGEQRR*PYLFNS Trigger: GGAATTAAAGAGGTAGGGTCACCTCCTCTGCTCTCC...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR TCA 90 bp | CCATATGATCGCGACAAACGGAACAAATGTTATGAATGGCTTTGGCTGCAGCAGTCTACTACCTCATACTaGGGGTGGCCTGCACAGATA | + |
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Preference number: 2 (lower is better) Translates to: PYDRDKRNKCYEWLWLQQSTTSY*GWPAQI Trigger: TATCTGTGCAGGCCACCCTCAGTATGAGGTAGTAGA...CTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTTTCAAGGAATTCTCTAGCCACCGACAGAAAGTCGGTCTGTCAACCTGCCATCCACAAGGATACTaGCAAGGTAGAGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: KPFKEFSSHRQKVGLSTCHPQGY*QGRGNR Trigger: CCTGTTTCCTCTACCTTGGCAGTATCCTTGTGGATG...GCAGGTTGACAGACCGACTTTCTGTCGGTGGCTAGAGAATTCCTTGAAAGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTGTGTGCACTGCATGCTaGTGTGTGTCTATCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPVCTAC*CVSIMC Trigger: ACACATGATAGACACACACCAGCATGCAGTGCACAC...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTTGTCTATCATGTGTGTaGATCATCTGCTACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPCLSCV*IICYQV Trigger: CACCTGGTAGCAGATGATGCACACACATGATAGACA...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTAAAGTCTCTCCCTGTGTaGCGGGATGGTCTGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ICYQVHISVLVSSQLSFLKSLPV*RDGLVV Trigger: TACCACCAGACCATCCCGCCACACAGGGAGAGACTT...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTATAATTTCTGTCCGCCTGTTGGCCCCAATCCGCAAGGAACGACTATGGAATCTTCATTTTCATaGTCTGGGCAGCGAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: VFYNFCPPVGPNPQGTTMESSFS*SGQRNS Trigger: GCTATTTCGCTGCCCAGACCATGAAAATGAAGATTC...CATAGTCGTTCCTTGCGGATTGGGGCCAACAGGCGGACAGAAATTATAGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAACACTCCATAGATCCAATCAGGAAGATCAAGTCCTTCACCAGGTCTGACAGATCTCCCAGACCTTaGCCTGGAGTACAGACAATT | + |
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Preference number: 2 (lower is better) Translates to: AKHSIDPIRKIKSFTRSDRSPRP*PGVQTI Trigger: AATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCT...GTCAGACCTGGTGAAGGACTTGATCTTCCTGATTGGATCTATGGAGTGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATTCCAAAGTTCGAAGATCTCCCAGACCTTGGCCTGGAGTACAGACAATTTCACAGCCATATGATATaGAGTCTCCAATGTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: AIPKFEDLPDLGLEYRQFHSHMI*SLQCQD Trigger: GTCCTGACATTGGAGACTGCATATCATATGGCTGTG...AAATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTTCGAACTTTGGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGTGTCTATCATGTGTGTaGATCATCTGCTACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: REREQGLIHICPLHPPVLCLSCV*IICYQV Trigger: CACCTGGTAGCAGATGATGCACACACATGATAGACA...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTTCTCAGTGTGTGCACTaGATGCTGGTGTGTGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: RARFNPYLSSPPTSFGFSSQCVH*MLVCVY Trigger: ATAGACACACACCAGCATGCAGTGCACACACTGAGA...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCTTTCAAGGAATTCTCTAGCCACCGACAGAAAGTCGGTCTGTCAACCTGCGCTTTGAAGATGCTGTaGATAACTTCATCATTGGTT | + |
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Preference number: 2 (lower is better) Translates to: KPFKEFSSHRQKVGLSTCALKML*ITSSLV Trigger: AACCAATGATGAAGTTATTCACAGCATCTTCAAAGC...GCAGGTTGACAGACCGACTTTCTGTCGGTGGCTAGAGAATTCCTTGAAAGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTTGTCTATCATGTGTGTaGATCATCTGCTACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RARFNPYLSSPPTSFGFSCLSCV*IICYQV Trigger: CACCTGGTAGCAGATGATGCACACACATGATAGACA...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATTCCAAAGTTCGAAGATCTCCCAGACCTTGGCCTGGAGTACAGACAATTTGAGGTCTTATCTTGTTaGAAGACCTCAAAAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AIPKFEDLPDLGLEYRQFEVLSC*KTSKRS Trigger: ACTCCTTTTTGAGGTCTTGCAACAAGATAAGACCTC...AAATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTTCGAACTTTGGAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAACACTCCATAGATCCAATCAGGAAGATCAAGTCCTTCACCAGGTCTGACTTTCACATAGTTCGGTaGAAATTCGGCAGTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: AKHSIDPIRKIKSFTRSDFHIVR*KFGSNS Trigger: TGAATTACTGCCGAATTTTCACCGAACTATGTGAAA...GTCAGACCTGGTGAAGGACTTGATCTTCCTGATTGGATCTATGGAGTGTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCCTCTGAATGTACGCTTTGAAGATGCTGTGAATAACTTCATCATTGGTATACTGAGGGTGGCCTaGACAGATAAGAAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: KQPLNVRFEDAVNNFIIGILRVA*TDKKQF Trigger: GAATTGCTTCTTATCTGTGCAGGCCACCCTCAGTAT...ACCAATGATGAAGTTATTCACAGCATCTTCAAAGCGTACATTCAGAGGCTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR TCA 72 bp | ATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTaGAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: IPNRDSLGCLGG*SLSLCGGMVWW Trigger: CCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 ENSMUST00000170647.2 |
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| 3UTR CCA 72 bp | CCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTaGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGT | + |
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Preference number: 3 (lower is better) Translates to: PSHPKQGLLRMP*RVKSLPVWRDG Trigger: ACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 ENSMUST00000170647.2 |
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| 3UTR CCA 72 bp | GCTCCACATTCTCAAAGGGCCATCTCAACTGAAGCCTaGGGCTCAGAGTCAGCAGGAGGAAGCTGCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: APHSQRAISTEA*GSESAGGSCSS Trigger: GGAGCTGCAGCTTCCTCCTGCTGACTCTGAGCCCCAGGCTTCAGTTGAGATGGCCCTTTGAGAATGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CCA 72 bp | GTGTACCGCACAGCTGTATGCACGGTCTCTGGGAGATaGACAACTCCCTCTAGTACCTCCACAAGTGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: VYRTAVCTVSGR*TTPSSTSTSVG Trigger: CCCTACACTTGTGGAGGTACTAGAGGGAGTTGTCCATCTCCCAGAGACCGTGCATACAGCTGTGCGGTACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
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| 3UTR CCA 72 bp | AAAGTCATCGGTCTCTTCAGGAACTCCCTCATGGTCTaGTTCCAACTGGCAGTGTCGAGCCAAGGCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KVIGLFRNSLMV*FQLAVSSQGMK Trigger: CTTCATGCCTTGGCTCGACACTGCCAGTTGGAACCAGACCATGAGGGAGTTCCTGAAGAGACCGATGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | GAACACTTCAAGGACTTTCTAGGCACAGATGCCAGGTaGTACCCACTGAAATCCAGGCTTGGACTAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EHFKDFLGTDAR*YPLKSRLGLSS Trigger: GGAGCTTAGTCCAAGCCTGGATTTCAGTGGGTAGCACCTGGCATCTGTGCCTAGAAAGTCCTTGAAGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR CCA 72 bp | CACAGATGCCAGGTGCTACCCACTGAAATCCAGGCTTaGACTAAGCTCCACATTCTCAAAGGGCCATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HRCQVLPTEIQA*TKLHILKGPSQ Trigger: TTGAGATGGCCCTTTGAGAATGTGGAGCTTAGTCCAAGCCTGGATTTCAGTGGGTAGCACCTGGCATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGCCATATGATCGCGACAAACGGAACAAATGTTATGAATGGCTTTGGCTGGGGCGAGGTCTGCTATaGCTAAAGCCAGCTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: AEPYDRDKRNKCYEWLWLGRGLL*LKPAVL Trigger: TAACACAGCTGGCTTTAGCAATAGCAGACCTCGCCC...CAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGCGATCATATGGCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | GCGACAAACGGAACAAATGTTATGAATGGCTTTGGCTaGAGCAGAAGCCAGAGGCTTTTCACACAGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATNGTNVMNGFG*SRSQRLFTQAF Trigger: AAAGGCCTGTGTGAAAAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGTTTGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR TCA 72 bp | AGATCCAATCAGGAAGATCAAGTCCTTCACCAGGTCTaGCACTCTCATTCGAAACTCCCCAAAGTCATCGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSNQEDQVLHQV*HSHSKLPKVIG Trigger: ACCGATGACTTTGGGGAGTTTCGAATGAGAGTGTCAGACCTGGTGAAGGACTTGATCTTCCTGATTGGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR TCA 72 bp | CTTTTAGCAAACCCACAGCAGCTTCGGGAGACAACATaGAAGAATCAAGGGAGTGGGCAATTTCTAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLANPQQLRETT*KNQGSGQFLGV Trigger: GACTCCTAGAAATTGCCCACTCCCTTGATTCTTTCATGTTGTCTCCCGAAGCTGCTGTGGGTTTGCTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | TGTGCACTGCATGCTGGTGTGTGTCTATCATGTGTGTaGATCATCTGCTACCAGGTGCATATTTCAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CALHAGVCLSCV*IICYQVHISVL Trigger: CAGAACTGAAATATGCACCTGGTAGCAGATGATGCACACACATGATAGACACACACCAGCATGCAGTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| 3UTR GCA 72 bp | TTTGTCCAAATCTTCCCGTGCCACAGCCATATGATATaGAGTCTCCAATGTCAGGACTCCCTGAAAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FVQIFPCHSHMI*SLQCQDSLKKL Trigger: CAGCTTTTTCAGGGAGTCCTGACATTGGAGACTGCATATCATATGGCTGTGGCACGGGAAGATTTGGACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | CACAAGTGTAGGGTTGTTCTCCGGATCCACACTCTTTaGTATAGCAGCCATGATAAAGAGAACCGCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HKCRVVLRIHTL*YSSHDKENRFC Trigger: ACAGAAGCGGTTCTCTTTATCATGGCTGCTATAGCAAAGAGTGTGGATCCGGAGAACAACCCTACACTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | TCGGCAGTAATTCAGAACTTTGTCCAAATCTTCCCGTaGCACAGCCATATGATATGCAGTCTCCAATGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SAVIQNFVQIFP*HSHMICSLQCQ Trigger: CTGACATTGGAGACTGCATATCATATGGCTGTGGCACGGGAAGATTTGGACAAAGTTCTGAATTACTGCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR GCA 72 bp | TGTGTCTATCATGTGTGTGCATCATCTGCTACCAGGTaGATATTTCAGTTCTGGTGTCATCTCAGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVYHVCASSATR*IFQFWCHLSFP Trigger: AGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACACACATGATAGACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| 3UTR CCA 72 bp | CAATGTCAGGACTCCCTGAAAAAGCTGCATGGCCAATaGCAAGTTAGTCTCTACATTTTCAATAGCATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QCQDSLKKLHGQ*QVSLYIFNSIE Trigger: CTCTATGCTATTGAAAATGTAGAGACTAACTTGCCATTGGCCATGCAGCTTTTTCAGGGAGTCCTGACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTTCAATAGGATCAGGGTaGGGCTCTACATTAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RARFNPYLSSPPTSFGFSSIGSG*GSTLKA Trigger: TGCTTTTAATGTAGAGCCCAACCCTGATCCTATTGA...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| 3UTR TCA 72 bp | ATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTaGCCCTACCTCTTTAATTCCAACTGTAACTATGTT | + |
|
Preference number: 3 (lower is better) Translates to: IHLCLKEGEQRR*PYLFNSNCNYV Trigger: AACATAGTTACAGTTGGAATTAAAGAGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| 3UTR CCA 72 bp | TTAGCAATGAGTCCCTTAAAGAAGCATGAGAGTCTGTaGGGAGCTCATAAAATGAGGTCTGAATCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LAMSPLKKHESL*GAHKMRSESSF Trigger: AAATGAAGATTCAGACCTCATTTTATGAGCTCCCCACAGACTCTCATGCTTCTTTAAGGGACTCATTGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGGCCTGGTACACGAGCTaGAAGGTTGGCTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKAWYTS*KVGLAP Trigger: GGGAGCCAAGCCAACCTTGCAGCTCGTGTACCAGGC...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGCCTGGTACACGAGCTaGAAGGTTGGCTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVAWYTS*KVGLAP Trigger: GGGAGCCAAGCCAACCTTGCAGCTCGTGTACCAGGC...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGTGTGGAGCAGCTGGCTaGCAAGTTGCTGGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVCGAAG*QVAGQA Trigger: AGCTTGGCCAGCAACTTGTCAGCCAGCTGCTCCACA...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGACAGGGTCCAGGAACTaGGGATTCCGGTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKTGSRN*GFRSTT Trigger: AGTGGTGGACCGGAATCCCCAGTTCCTGGACCCTGT...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGTGTGGAGCAGCTGGCTaGCAAGTTGCTGGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRCGAAG*QVAGQA Trigger: AGCTTGGCCAGCAACTTGTCAGCCAGCTGCTCCACA...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGACGGTCTCTGGGAGATaGACAACTCCCTCTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVTVSGR*TTPSST Trigger: GGTACTAGAGGGAGTTGTCCATCTCCCAGAGACCGT...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGCGTGCCACAGCCATATaGTATGCAGTCTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVRATAI*YAVSNV Trigger: GACATTGGAGACTGCATATCATATGGCTGTGGCACG...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGCGTGCCACAGCCATATaGTATGCAGTCTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKRATAI*YAVSNV Trigger: GACATTGGAGACTGCATATCATATGGCTGTGGCACG...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGACAGGGCTTCGCTaGATAAATCGGGTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRVTGLR*INRVAN Trigger: GTTAGCCACCCGATTTATTCAGCGAAGCCCTGTCAC...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGTGGGATCTGAAGAAATaGCATTGCTGGGCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKWDLKK*HCWAPE Trigger: CTCAGGAGCCCAGCAATGGCATTTCTTCAGATCCCA...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGAACTCCCTCATGGTCTaGTTCCAACTGGCAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRNSLMV*FQLAVS Trigger: CGACACTGCCAGTTGGAACCAGACCATGAGGGAGTT...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGCTTCGGGAGACAACATaGAAGAATCAAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRLRETT*KNQGSG Trigger: CCCACTCCCTTGATTCTTTCATGTTGTCTCCCGAAG...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGCATCCACAAGGATACTaGCAAGGTAGAGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVHPQGY*QGRGNR Trigger: CCTGTTTCCTCTACCTTGGCAGTATCCTTGTGGATG...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGATGTCTAATAACCCCTaGCGACAGCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKMSNNP*RQPSSM Trigger: CATGGAAGAAGGCTGTCGGCAGGGGTTATTAGACAT...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGATGTCTAATAACCCCTaGCGACAGCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVMSNNP*RQPSSM Trigger: CATGGAAGAAGGCTGTCGGCAGGGGTTATTAGACAT...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGGAATTGGCATCTCGGTaGTCCAAAGTGGTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKELASR*SKVVDA Trigger: TGCATCAACCACTTTGGACCACCGAGATGCCAATTC...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGCATGTGTGGAGCAGCTaGCTGACAAGTTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKHVWSS*LTSCWP Trigger: TGGCCAGCAACTTGTCAGCCAGCTGCTCCACACATG...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGGTGACAGGGCTTCGCTaGATAAATCGGGTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKVTGLR*INRVAN Trigger: GTTAGCCACCCGATTTATTCAGCGAAGCCCTGTCAC...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCAGAGGCTTTTCACACAGGCCTTTCATCAAATAGCCCAATACAGGGTGCCTGGTACACGAGCTaGAAGGTTGGCTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKPEAFHTGLSSNSPIQGAWYTS*KVGLAP Trigger: GGGAGCCAAGCCAACCTTGCAGCTCGTGTACCAGGC...ACCCTGTATTGGGCTATTTGATGAAAGGCCTGTGTGAAAAGCCTCTGGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGCACAGCCATATGATATaGAGTCTCCAATGTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVHSHMI*SLQCQD Trigger: GTCCTGACATTGGAGACTGCATATCATATGGCTGTG...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGGCTGAAAGGTGGGAATaGATAGCGCCTGGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKAERWE*IAPGAC Trigger: ACATGCTCCAGGCGCTATGCATTCCCACCTTTCAGC...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCGCGCTCCTTTCCGCTaGGATCCGGGTCGTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPRAPFR*DPGRGK Trigger: TTTACCACGACCCGGATCCCAGCGGAAAGGAGCGCG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGCGGATCTGTAACAATTaGTCAGAAATCTCCCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRRICNN*SEISQA Trigger: CGCTTGGGAGATTTCTGATCAATTGTTACAGATCCG...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGAGGAAACAGGAATGCTaGTGTACATGGTACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKRKQEC*CTWYTF Trigger: GAATGTGTACCATGTACATCAGCATTCCTGTTTCCT...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGACTGGCCATATTTCCTaGATGACTTTTTGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKTGHIS*MTFWHG Trigger: TCCATGCCAAAAAGTCATCCAGGAAATATGGCCAGT...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGAGGAAACAGGAATGCTaGTGTACATGGTACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRRKQEC*CTWYTF Trigger: GAATGTGTACCATGTACATCAGCATTCCTGTTTCCT...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTGTGGAGCAGCTGGCTaGCAAGTTGCTGGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGCGAAG*QVAGQA Trigger: AGCTTGGCCAGCAACTTGTCAGCCAGCTGCTCCACA...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGGAGGTCTTATCTTGTTaGAAGACCTCAAAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKEVLSC*KTSKRS Trigger: ACTCCTTTTTGAGGTCTTGCAACAAGATAAGACCTC...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGATGTCTAATAACCCCTaGCGACAGCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKMSNNP*RQPSSM Trigger: CATGGAAGAAGGCTGTCGGCAGGGGTTATTAGACAT...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGCGCGCTCCTTTCCGCTaGGATCCGGGTCGTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLRAPFR*DPGRGK Trigger: TTTACCACGACCCGGATCCCAGCGGAAAGGAGCGCG...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGAATCTTCATTTTCATaGTCTGGGCAGCGAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRESSFS*SGQRNS Trigger: GCTATTTCGCTGCCCAGACCATGAAAATGAAGATTC...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCACAGGGTCCAGGAACTaGGGATTCCGGTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGTGSRN*GFRSTT Trigger: AGTGGTGGACCGGAATCCCCAGTTCCTGGACCCTGT...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGATCTAAGAAGACAGTaGGATCTGAAGAAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVDLRRQ*DLKKCH Trigger: ATGGCATTTCTTCAGATCCCACTGTCTTCTTAGATC...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGCACTGTGGTCTCTTTTaGCAAACCTTTCAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVHCGLF*QTFQGI Trigger: AATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTG...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGCTTTGAAGATGCTGTaGATAACTTCATCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVALKML*ITSSLV Trigger: AACCAATGATGAAGTTATTCACAGCATCTTCAAAGC...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGGCTTTGAAGATGCTGTaGATAACTTCATCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKALKML*ITSSLV Trigger: AACCAATGATGAAGTTATTCACAGCATCTTCAAAGC...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGGTAGTGAAGAGAGTAGAATACAACTaGGCAAAACACTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PWRVKSLPVWRDGLVVVKRVEYN*AKHSID Trigger: ATCTATGGAGTGTTTTGCTCAGTTGTATTCTACTCT...CTTCACTACCACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGAGCGCTTGCACCGCCTaGTACACGAGCTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLSACTA*YTSCKV Trigger: AACCTTGCAGCTCGTGTACCAGGCGGTGCAAGCGCT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | CGCAAGGAACGACTATGTACTTCTTCGGGTAACACTGTAAGGATTTCCAGCAAAAGCGCTTGCACCGCCTaGTACACGAGCTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKERLCTSSGNTVRISSKSACTA*YTSCKV Trigger: AACCTTGCAGCTCGTGTACCAGGCGGTGCAAGCGCT...TTTGCTGGAAATCCTTACAGTGTTACCCGAAGAAGTACATAGTCGTTCCTTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| CDS-3UTR CCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCCATGTGTGGAGCAGCTaGCTGACAAGTTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSHVWSS*LTSCWP Trigger: TGGCCAGCAACTTGTCAGCCAGCTGCTCCACACATG...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGCACTGTGGTCTCTTTTaGCAAACCTTTCAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRHCGLF*QTFQGI Trigger: AATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTG...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCGCTGAAAGGTGGGAATaGATAGCGCCTGGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGAERWE*IAPGAC Trigger: ACATGCTCCAGGCGCTATGCATTCCCACCTTTCAGC...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | GCAATTCCAAAGTTCGAAGATCTCCCAGACCTTGGCCTGGAGTACAGACAATTTCAAAGAGACGAACGCTaGAGCTCCCCAAGCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AIPKFEDLPDLGLEYRQFQRDER*SSPSQN Trigger: GTTTTGGCTTGGGGAGCTGCAGCGTTCGTCTCTTTG...AAATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTTCGAACTTTGGAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTAGCGCTTGCACCGCCTaGTACACGAGCTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFSACTA*YTSCKV Trigger: AACCTTGCAGCTCGTGTACCAGGCGGTGCAAGCGCT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCACGGTCTCTGGGAGATaGACAACTCCCTCTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGTVSGR*TTPSST Trigger: GGTACTAGAGGGAGTTGTCCATCTCCCAGAGACCGT...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| 3UTR CAA 72 bp | GGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTaGGCTTTTCTCCCCAAGGCTGATGACAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIHICPLHPPV*AFLPKADDKGP Trigger: TGGGCCTTTGTCATCAGCCTTGGGGAGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCGGCAGCGAAATAGCATaGTTCCACATCCTGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGGSEIA*FHILSD Trigger: ATCCGACAGGATGTGGAATCATGCTATTTCGCTGCC...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCCAGCTGTGTTACAATaGCAGGCGACAAGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPPAVLQ*QATSLS Trigger: TGAAAGACTTGTCGCCTGTCATTGTAACACAGCTGG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTATCGGGTGGCTAACCTaGATAGGTCATCTACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPIGWLT*IGHLQC Trigger: ACACTGTAGATGACCTATTCAGGTTAGCCACCCGAT...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTGTGACAGGGCTTCGCTaGATAAATCGGGTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFVTGLR*INRVAN Trigger: GTTAGCCACCCGATTTATTCAGCGAAGCCCTGTCAC...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTGTCCAAATCTTCCCGTaGCACAGCCATATGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPVQIFP*HSHMIC Trigger: GCATATCATATGGCTGTGGCACGGGAAGATTTGGAC...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCATGAATGGCTTTGGCTaGAGCAGAAGCCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGMNGFG*SRSQRL Trigger: AAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCAT...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTGAAAGGTGGGAATaGATAGCGCCTGGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLAERWE*IAPGAC Trigger: ACATGCTCCAGGCGCTATGCATTCCCACCTTTCAGC...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTTTGGCTACTCCTGTGTaGATGAGGTCTCGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPLATPV*MRSRRN Trigger: ATTTCTGCGAGACCTCATCCACACAGGAGTAGCCAA...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCAGTTGCTGGCCAAGCTaGCTCATCACCTGTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSSCWPS*LITCPI Trigger: AATTGGACAGGTGATGAGCCAGCTTGGCCAGCAACT...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTCATGTGTGGAGCAGCTaGCTGACAAGTTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFHVWSS*LTSCWP Trigger: TGGCCAGCAACTTGTCAGCCAGCTGCTCCACACATG...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGTTTCACATAGTTCGGTaGAAATTCGGCAGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKFHIVR*KFGSNS Trigger: TGAATTACTGCCGAATTTTCACCGAACTATGTGAAA...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCTTCGGGAGACAACATaGAAGAATCAAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFLRETT*KNQGSG Trigger: CCCACTCCCTTGATTCTTTCATGTTGTCTCCCGAAG...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCCCATTGCTGGGCTCCTaGGACAACAGCTTTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGPLLGS*DNSFFN Trigger: ATTGAAAAAGCTGTTGTCTCAGGAGCCCAGCAATGG...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTATACTGAGGGTGGCCTaGACAGATAAGAAGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPILRVA*TDKKQF Trigger: GAATTGCTTCTTATCTGTGCAGGCCACCCTCAGTAT...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTTGGGATCTGAAGAAATaGCATTGCTGGGCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFWDLKK*HCWAPE Trigger: CTCAGGAGCCCAGCAATGGCATTTCTTCAGATCCCA...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCCGATTGTCGGCTCGGTaGTTATTTAGAGTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGRLSAR*LFRVSD Trigger: GTCTGAGACTCTAAATAAGCACCGAGCCGACAATCG...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCCATCCACAAGGATACTaGCAAGGTAGAGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGHPQGY*QGRGNR Trigger: CCTGTTTCCTCTACCTTGGCAGTATCCTTGTGGATG...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTAACTCCCTCATGGTCTaGTTCCAACTGGCAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSNSLMV*FQLAVS Trigger: CGACACTGCCAGTTGGAACCAGACCATGAGGGAGTT...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCGAATTGGCATCTCGGTaGTCCAAAGTGGTTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSELASR*SKVVDA Trigger: TGCATCAACCACTTTGGACCACCGAGATGCCAATTC...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTGGCTACTCCTGTGTaGATGAGGTCTCGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGLATPV*MRSRRN Trigger: ATTTCTGCGAGACCTCATCCACACAGGAGTAGCCAA...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTGGCAGCGAAATAGCATaGTTCCACATCCTGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSGSEIA*FHILSD Trigger: ATCCGACAGGATGTGGAATCATGCTATTTCGCTGCC...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCACGGAACAAATGTTATaGATGGCTTTGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGTEQML*MALAAA Trigger: TGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGT...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTATGAATGGCTTTGGCTaGAGCAGAAGCCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFMNGFG*SRSQRL Trigger: AAGCCTCTGGCTTCTGCTGCAGCCAAAGCCATTCAT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCATCCACAAGGATACTaGCAAGGTAGAGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFHPQGY*QGRGNR Trigger: CCTGTTTCCTCTACCTTGGCAGTATCCTTGTGGATG...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGAGATCTCCCAGACCTTaGCCTGGAGTACAGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLRSPRP*PGVQTI Trigger: AATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTAGTTGCTGGCCAAGCTaGCTCATCACCTGTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFSCWPS*LITCPI Trigger: AATTGGACAGGTGATGAGCCAGCTTGGCCAGCAACT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTAGTTGCTGGCCAAGCTaGCTCATCACCTGTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSSCWPS*LITCPI Trigger: AATTGGACAGGTGATGAGCCAGCTTGGCCAGCAACT...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTATCCCTTAAAGAAGCATaGGAGTCTGTGGGGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLSLKEA*ESVGSS Trigger: TGAGCTCCCCACAGACTCTCATGCTTCTTTAAGGGA...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTATCTACTACCTCATACTaGGGGTGGCCTGCACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLSTTSY*GWPAQI Trigger: TATCTGTGCAGGCCACCCTCAGTATGAGGTAGTAGA...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTCCATTGCTGGGCTCCTaGGACAACAGCTTTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFPLLGS*DNSFFN Trigger: ATTGAAAAAGCTGTTGTCTCAGGAGCCCAGCAATGG...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTATCGGGTGGCTAACCTaGATAGGTCATCTACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSIGWLT*IGHLQC Trigger: ACACTGTAGATGACCTATTCAGGTTAGCCACCCGAT...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCACAGCCATATGATATaGAGTCTCCAATGTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFHSHMI*SLQCQD Trigger: GTCCTGACATTGGAGACTGCATATCATATGGCTGTG...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTGTCCAAATCTTCCCGTaGCACAGCCATATGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSVQIFP*HSHMIC Trigger: GCATATCATATGGCTGTGGCACGGGAAGATTTGGAC...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTATACTGAGGGTGGCCTaGACAGATAAGAAGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFILRVA*TDKKQF Trigger: GAATTGCTTCTTATCTGTGCAGGCCACCCTCAGTAT...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTCGGCACTAGTGACTTaGTTGTGGAAATCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RERARFNPYLSSPPTSFGSALVT*LWKSVS Trigger: ACTTACAGATTTCCACAAGCAAGTCACTAGTGCCGA...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTAAGCATGAGAGTCTGTaGGGAGCTCATAAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFKHESL*GAHKMR Trigger: CCTCATTTTATGAGCTCCCCACAGACTCTCATGCTT...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTAGATCTCCCAGACCTTaGCCTGGAGTACAGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFRSPRP*PGVQTI Trigger: AATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTTGGCTACTCCTGTGTaGATGAGGTCTCGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFLATPV*MRSRRN Trigger: ATTTCTGCGAGACCTCATCCACACAGGAGTAGCCAA...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCACTGTGGTCTCTTTTaGCAAACCTTTCAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPHCGLF*QTFQGI Trigger: AATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| 3UTR CAA 72 bp | AACTGGATTGGACTTAGCAACTCAATAGGATCAGGGTaGGGCTCTACATTAAAAGCAACTTTGACCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NWIGLSNSIGSG*GSTLKATLTLA Trigger: AGCCAGGGTCAAAGTTGCTTTTAATGTAGAGCCCAACCCTGATCCTATTGAGTTGCTAAGTCCAATCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTCGGATCTGTAACAATTaGTCAGAAATCTCCCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFRICNN*SEISQA Trigger: CGCTTGGGAGATTTCTGATCAATTGTTACAGATCCG...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTACCAGCTGTGTTACAATaGCAGGCGACAAGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLPAVLQ*QATSLS Trigger: TGAAAGACTTGTCGCCTGTCATTGTAACACAGCTGG...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTACGGAACAAATGTTATaGATGGCTTTGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RARFNPYLSSPPTSFGFSTEQML*MALAAA Trigger: TGCTGCAGCCAAAGCCATTCATAACATTTGTTCCGT...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCACTTTTTGGCATGGATaGGTCTGTCCATTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSTFWHG*VCPFST Trigger: TGTAGAAAATGGACAGACTCATCCATGCCAAAAAGT...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGAGGAAACAGGAATGCTaGTGTACATGGTACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLRKQEC*CTWYTF Trigger: GAATGTGTACCATGTACATCAGCATTCCTGTTTCCT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTAATCGGGTGGCTAACCTaGATAGGTCATCTACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLIGWLT*IGHLQC Trigger: ACACTGTAGATGACCTATTCAGGTTAGCCACCCGAT...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR TCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTCAAAATCTTCTTCATaGTCATTGGCTACTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSSKSSS*SLATPV Trigger: CACAGGAGTAGCCAATGATCATGAAGAAGATTTTGA...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012679.15 |
||
| CDS-3UTR GCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTACGATTGTCGGCTCGGTaGTTATTTAGAGTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLRLSAR*LFRVSD Trigger: GTCTGAGACTCTAAATAAGCACCGAGCCGACAATCG...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGTCGGCACTAGTGACTTaGTTGTGGAAATCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLSALVT*LWKSVS Trigger: ACTTACAGATTTCCACAAGCAAGTCACTAGTGCCGA...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CCA 90 bp | TGTGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTGAATCTTCATTTTCATaGTCTGGGCAGCGAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: CASSATRCIFQFWCHLSFESSFS*SGQRNS Trigger: GCTATTTCGCTGCCCAGACCATGAAAATGAAGATTC...AAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGAAGCTGCATGGCCAATaGCAAGTTAGTCTCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLKLHGQ*QVSLYI Trigger: AATGTAGAGACTAACTTGCCATTGGCCATGCAGCTT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CCA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCGATCTAAGAAGACAGTaGGATCTGAAGAAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CIICYQVHISVLVSSQLSDLRRQ*DLKKCH Trigger: ATGGCATTTCTTCAGATCCCACTGTCTTCTTAGATC...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGACTGGCCATATTTCCTaGATGACTTTTTGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLTGHIS*MTFWHG Trigger: TCCATGCCAAAAAGTCATCCAGGAAATATGGCCAGT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGACTTTTTGGCATGGATaGGTCTGTCCATTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLTFWHG*VCPFST Trigger: TGTAGAAAATGGACAGACTCATCCATGCCAAAAAGT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGAGGTCTTATCTTGTTaGAAGACCTCAAAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLEVLSC*KTSKRS Trigger: ACTCCTTTTTGAGGTCTTGCAACAAGATAAGACCTC...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTAAAGCATGAGAGTCTGTaGGGAGCTCATAAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLKHESL*GAHKMR Trigger: CCTCATTTTATGAGCTCCCCACAGACTCTCATGCTT...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTAAGCTGCATGGCCAATaGCAAGTTAGTCTCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFKLHGQ*QVSLYI Trigger: AATGTAGAGACTAACTTGCCATTGGCCATGCAGCTT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGTTTCACATAGTTCGGTaGAAATTCGGCAGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: REREQGLIHICPLHPPVLFHIVR*KFGSNS Trigger: TGAATTACTGCCGAATTTTCACCGAACTATGTGAAA...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTATCGGCACTAGTGACTTaGTTGTGGAAATCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICYQVHISVLVSSQLSFLSALVT*LWKSVS Trigger: ACTTACAGATTTCCACAAGCAAGTCACTAGTGCCGA...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTAGAGTAGAATACAACTaGGCAAAACACTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSATRCIFQFWCHLSFPFRVEYN*AKHSID Trigger: ATCTATGGAGTGTTTTGCTCAGTTGTATTCTACTCT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS CCA 90 bp | AACGCTGCAGCTCCCCAAGCCAAAACGAGGCGCGCTCCTTTCCGCTaGGATCCGGGTCGTGGTAAAGCGCTTGCACCGCCTGGTACACGA | + |
|
Preference number: 5 (lower is better) Translates to: NAAAPQAKTRRAPFR*DPGRGKALAPPGTR Trigger: TCGTGTACCAGGCGGTGCAAGCGCTTTACCACGACCCGGATCCCAGCGGAAAGGAGCGCGCCTCGTTTTGGCTTGGGGAGCTGCAGCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGCCATCTCAACTGAAGCCTGGGGCTCAGAGTCAGCAGGAGGAAGCTGCGTCGTGGTAAAGCGCTaGCACCGCCTGGTACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRAISTEAWGSESAGGSCVVVKR*HRLVHE Trigger: CTCGTGTACCAGGCGGTGCAAGCGCTTTACCACGAC...GCAGCTTCCTCCTGCTGACTCTGAGCCCCAGGCTTCAGTTGAGATGGCCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170350.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGATGCCTTGGAGGGTGAAGTCTCTCCCTGTGTGGCGGGATGGTCTGGTGAAGATCTCCCAGACCTaGGCCTGGAGTACAGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRMPWRVKSLPVWRDGLVKISQT*AWSTDN Trigger: ATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTT...CACCAGACCATCCCGCCACACAGGGAGAGACTTCACCCTCCAAGGCATCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCGTCGTGGTAAAGCGCTaGCACCGCCTGGTACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: RERARFNPYLSSPPTSFGVVVKR*HRLVHE Trigger: CTCGTGTACCAGGCGGTGCAAGCGCTTTACCACGAC...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGTCGTGGTAAAGCGCTaGCACCGCCTGGTACACGAG | + |
|
Preference number: 5 (lower is better) Translates to: REREQGLIHICPLHPPVLVVVKR*HRLVHE Trigger: CTCGTGTACCAGGCGGTGCAAGCGCTTTACCACGAC...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGCTCGGCACTAGTGACTaGCTTGTGGAAATCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKLGTSD*LVEICK Trigger: CTTACAGATTTCCACAAGCAAGTCACTAGTGCCGAG...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGGTGAAGTATCCAAAGGTAGTCTaGCTAGGACAAGAGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSPSHPKQGLLRMPWRVKYPKVV*LGQELF Trigger: GAACAGCTCTTGTCCTAGCAAGACTACCTTTGGATA...CTTCACCCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
||
| CDS-3UTR CAA 90 bp | CGCGCTGTTTCTCCCTCACATCCCAAACAGGGACTCCTTAGGATGCCTTGGAGGAAAACAGATAAATCATaGGCTACTCCTGTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAVSPSHPKQGLLRMPWRKTDKS*ATPVWM Trigger: CATCCACACAGGAGTAGCCAATGATTTATCTGTTTT...CCTCCAAGGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115251.8 ENSMUST00000170647.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGACCTCCCAGGGTGGGTaGCCTTCCTTCAGAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: REREQGLIHICPLHPPVLTSQGG*PSFRVE Trigger: TTCTACTCTGAAGGAAGGCAACCCACCCTGGGAGGT...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTCCACAAGTGTAGGGTaGTTCTCCGGATCCACACTC | + |
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Preference number: 5 (lower is better) Translates to: CIICYQVHISVLVSSQLSSTSVG*FSGSTL Trigger: GAGTGTGGATCCGGAGAACAACCCTACACTTGTGGA...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TGCATCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCAGTGCTGCAGATCCTTaGCCTACACAACGAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: CIICYQVHISVLVSSQLSSAADP*PTQRTA Trigger: TGCGGTTCGTTGTGTAGGCAAAGGATCTGCAGCACT...GGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCAGTGCTGCAGATCCTTaGCCTACACAACGAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: RERARFNPYLSSPPTSFGSAADP*PTQRTA Trigger: TGCGGTTCGTTGTGTAGGCAAAGGATCTGCAGCACT...GCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGGGCGAGGTCTGCTATaGCTAAAGCCAGCTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: REREQGLIHICPLHPPVLGRGLL*LKPAVL Trigger: TAACACAGCTGGCTTTAGCAATAGCAGACCTCGCCC...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTACCTCCCAGGGTGGGTaGCCTTCCTTCAGAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSATRCIFQFWCHLSFPFTSQGG*PSFRVE Trigger: TTCTACTCTGAAGGAAGGCAACCCACCCTGGGAGGT...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCGCTCTACAATTCGATaGTCGGCTCGGTGCTTATTT | + |
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Preference number: 5 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPRSTIR*SARCLF Trigger: AAATAAGCACCGAGCCGACAATCGAATTGTAGAGCG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCTCGGCACTAGTGACTaGCTTGTGGAAATCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPLGTSD*LVEICK Trigger: CTTACAGATTTCCACAAGCAAGTCACTAGTGCCGAG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTGGGCGAGGTCTGCTATaGCTAAAGCCAGCTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RARFNPYLSSPPTSFGFSGRGLL*LKPAVL Trigger: TAACACAGCTGGCTTTAGCAATAGCAGACCTCGCCC...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTCCACAAGTGTAGGGTaGTTCTCCGGATCCACACTC | + |
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Preference number: 5 (lower is better) Translates to: SSATRCIFQFWCHLSFPFSTSVG*FSGSTL Trigger: GAGTGTGGATCCGGAGAACAACCCTACACTTGTGGA...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTCCACTGTGGTCTCTTTaGGCAAACCTTTCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPPLWSL*ANLSRN Trigger: ATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTGG...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTAAGATCTCCCAGACCTaGGCCTGGAGTACAGACAAT | + |
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Preference number: 5 (lower is better) Translates to: RARFNPYLSSPPTSFGFSKISQT*AWSTDN Trigger: ATTGTCTGTACTCCAGGCCAAGGTCTGGGAGATCTT...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGCCACTGTGGTCTCTTTaGGCAAACCTTTCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: REREQGLIHICPLHPPVLPLWSL*ANLSRN Trigger: ATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTGG...CAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGGTTTAATCCATATTTGTCCTCTCCACCCACCAGTTTTGGCTTTTCTCTCGGCACTAGTGACTaGCTTGTGGAAATCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: RARFNPYLSSPPTSFGFSLGTSD*LVEICK Trigger: CTTACAGATTTCCACAAGCAAGTCACTAGTGCCGAG...AGAAAAGCCAAAACTGGTGGGTGGAGAGGACAAATATGGATTAAACCTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCTATTCACCTGTGTTTAAAGGAAGGAGAGCAGAGGAGGTGACCCTACCTAAAACAGATAAATCATaGGCTACTCCTGTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: FLYSPVFKGRRAEEVTLPKTDKS*ATPVWM Trigger: CATCCACACAGGAGTAGCCAATGATTTATCTGTTTT...AGGTAGGGTCACCTCCTCTGCTCTCCTTCCTTTAAACACAGGTGAATAGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTACGCTCTACAATTCGATaGTCGGCTCGGTGCTTATTT | + |
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Preference number: 5 (lower is better) Translates to: ICYQVHISVLVSSQLSFLRSTIR*SARCLF Trigger: AAATAAGCACCGAGCCGACAATCGAATTGTAGAGCG...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS-3UTR CAA 90 bp | TCATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTCCACTGTGGTCTCTTTaGGCAAACCTTTCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SSATRCIFQFWCHLSFPFPLWSL*ANLSRN Trigger: ATTCCTTGAAAGGTTTGCCAAAAGAGACCACAGTGG...AAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170647.2 |
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| CDS-3UTR CAA 90 bp | ATCTGCTACCAGGTGCATATTTCAGTTCTGGTGTCATCTCAGCTTTCCTTTTTATATCCAAAGGTAGTCTaGCTAGGACAAGAGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: ICYQVHISVLVSSQLSFLYPKVV*LGQELF Trigger: GAACAGCTCTTGTCCTAGCAAGACTACCTTTGGATA...TAAAAAGGAAAGCTGAGATGACACCAGAACTGAAATATGCACCTGGTAGCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 |
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| CDS CAA 90 bp | CGAGGCGCGCTCCTTTCCGCTGGGATCCGGGTCGTGGTAAAGCGCTaGCACCGCCTGGTACACGAGCTGCAAGGTTGGCTTGGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGALLSAGIRVVVKR*HRLVHELQGWLGSL Trigger: GAGGGAGCCAAGCCAACCTTGCAGCTCGTGTACCAGGCGGTGCAAGCGCTTTACCACGACCCGGATCCCAGCGGAAAGGAGCGCGCCTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
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| CDS CCA 72 bp | GCTCCCCAAGCCAAAACGAGGCGCGCTCCTTTCCGCTaGGATCCGGGTCGTGGTAAAGCGCTTGCACCGCCT | + |
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Preference number: 6 (lower is better) Translates to: APQAKTRRAPFR*DPGRGKALAPP Trigger: AGGCGGTGCAAGCGCTTTACCACGACCCGGATCCCAGCGGAAAGGAGCGCGCCTCGTTTTGGCTTGGGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
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| CDS CAA 72 bp | CTCCTTTCCGCTGGGATCCGGGTCGTGGTAAAGCGCTaGCACCGCCTGGTACACGAGCTGCAAGGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLSAGIRVVVKR*HRLVHELQGWL Trigger: AAGCCAACCTTGCAGCTCGTGTACCAGGCGGTGCAAGCGCTTTACCACGACCCGGATCCCAGCGGAAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012679.15 ENSMUST00000115251.8 ENSMUST00000170350.8 |
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