Pregenerated sensors for TNPO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009470Ensembl transcript IDs: ENSMUST00000109399.9, ENSMUST00000109401.8, ENSMUST00000179301.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCACCTTTCGTTTGATCCCCGACCCCAGTTATTCCTCCCTCCCTaGCCAGCCCGCAAAGATAAAGGAGTGGCGCGTCGGCATGTCACA | + |
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Preference number: 1 (lower is better) Translates to: CHLSFDPRPQLFLPP*PARKDKGVARRHVT Trigger: TGTGACATGCCGACGCGCCACTCCTTTATCTTTGCGGGCTGGGCAGGGAGGGAGGAATAACTGGGGTCGGGGATCAAACGAAAGGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR CCA 90 bp | GCCACCTTACTGCTGCAGCCTCCCACTCTTAGGTGTCCTTTGCTGTaGACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTT | + |
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Preference number: 1 (lower is better) Translates to: ATLLLQPPTLRCPLL*TWDFPPPYHSLGIV Trigger: AACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTCCACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAGTAAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR CCA 90 bp | ATATATCCACATAGGGAAGCCGTGACAAGAGGTGAGGAGACAGTGTaGAACCTCGTCACTGAGGTGGACATTAGGAGGAGACAACATTGC | + |
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Preference number: 1 (lower is better) Translates to: IYPHREAVTRGEETV*NLVTEVDIRRRQHC Trigger: GCAATGTTGTCTCCTCCTAATGTCCACCTCAGTGACGAGGTTCCACACTGTCTCCTCACCTCTTGTCACGGCTTCCCTATGTGGATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR GCA 90 bp | ACGTGGGAAATTTATATAAAAACCTTTGATAAAAAGCCACCTTACTaGTGCAGCCTCCCACTCTTAGGTGTCCTTTGCTGTGGACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: TWEIYIKTFDKKPPY*CSLPLLGVLCCGPG Trigger: CCCAGGTCCACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAGTAAGGTGGCTTTTTATCAAAGGTTTTTATATAAATTTCCCACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR GCA 90 bp | CATGGCATTGAACTAGATAATATTGTTACCAACACAGGCCATTACTaGGCATCTGCCCATCACAATTATCCCAGGGTGTTAACCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: HGIELDNIVTNTGHY*ASAHHNYPRVLTTD Trigger: GTCTGTGGTTAACACCCTGGGATAATTGTGATGGGCAGATGCGCAGTAATGGCCTGTGTTGGTAACAATATTATCTAGTTCAATGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR GCA 90 bp | TGGGAAATTTATATAAAAACCTTTGATAAAAAGCCACCTTACTGCTaGAGCCTCCCACTCTTAGGTGTCCTTTGCTGTGGACCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: WEIYIKTFDKKPPYC*SLPLLGVLCCGPGI Trigger: AATCCCAGGTCCACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAGTAAGGTGGCTTTTTATCAAAGGTTTTTATATAAATTTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR TCA 90 bp | TTAACTGGAACGAGGCTTAGAAGCAGTGCCATATTTAATACAGTATaGAATGCACTAGTTGCTATACAATGCTACTGCATGGCATTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LTGTRLRSSAIFNTV*NALVAIQCYCMALN Trigger: GTTCAATGCCATGCAGTAGCATTGTATAGCAACTAGTGCATTTCATACTGTATTAAATATGGCACTGCTTCTAAGCCTCGTTCCAGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR GCA 90 bp | ACCAGTCTTAACTTCCCTCAAAGTCATGCATGCATTCAGCTGCTATaGATCTTCTTATTTCAACACAGTATACTCTGGGATACAAACTAT | + |
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Preference number: 1 (lower is better) Translates to: TSLNFPQSHACIQLL*IFLFQHSILWDTNY Trigger: ATAGTTTGTATCCCAGAGTATACTGTGTTGAAATAAGAAGATGCATAGCAGCTGAATGCATGCATGACTTTGAGGGAAGTTAAGACTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR GCA 90 bp | AGAAAACCAGTCTTAACTTCCCTCAAAGTCATGCATGCATTCAGCTaGTATGCATCTTCTTATTTCAACACAGTATACTCTGGGATACAA | + |
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Preference number: 1 (lower is better) Translates to: RKPVLTSLKVMHAFS*YASSYFNTVYSGIQ Trigger: TTGTATCCCAGAGTATACTGTGTTGAAATAAGAAGATGCATAGCAGCTGAATGCATGCATGACTTTGAGGGAAGTTAAGACTGGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR CCA 90 bp | TGCATTCAGCTGCTATGCATCTTCTTATTTCAACACAGTATACTCTaGGATACAAACTATAAAAACAGTTGCTGTAATTATGCGCATACC | + |
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Preference number: 1 (lower is better) Translates to: CIQLLCIFLFQHSIL*DTNYKNSCCNYAHT Trigger: GGTATGCGCATAATTACAGCAACTGTTTTTATAGTTTGTATCCCAGAGTATACTGTGTTGAAATAAGAAGATGCATAGCAGCTGAATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGACTCAGGAAGGGCCTaGGGTGCAGACGTGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQDSGRA*GADVHG Trigger: ACCATGCACGTCTGCACCCCAGGCCCTTCCTGAGTC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAGAAAGCACACCACACTaGCAGCACGGAGGCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTESTPH*QHGGTG Trigger: ACCTGTGCCTCCGTGCTGTCAGTGTGGTGTGCTTTC...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACACCAACTGCACTCTATaGGAGGCAAGCATGCTACGG | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNTNCTL*EASMLR Trigger: CCGTAGCATGCTTGCCTCGCATAGAGTGCAGTTGGT...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGCCAGAGCGCATGCCTaGACCTTAAAACTGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQARAHA*TLKLHL Trigger: AAGGTGCAGTTTTAAGGTTCAGGCATGCGCTCTGGC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAACCAACTGCACTCTATaGGAGGCAAGCATGCTACGG | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTTNCTL*EASMLR Trigger: CCGTAGCATGCTTGCCTCGCATAGAGTGCAGTTGGT...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR CAA 90 bp | CTCAGGAAGGGCCTGGGGTGCAGACGTGCATGGTACACTCTTCTCTaGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACATTCAATA | + |
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Preference number: 2 (lower is better) Translates to: LRKGLGCRRAWYTLL*GRMLLHCYLLIHSI Trigger: TATTGAATGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCATGCACGTCTGCACCCCAGGCCCTTCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACAATGCAGGGCTATATTaGACTGGTAACGGCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNNAGLY*TGNGNP Trigger: TGGGTTGCCGTTACCAGTTCAATATAGCCCTGCATT...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACTCAGGCCCCACAGACTaGAATTTGCAAAGCCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNSGPTD*NLQSQN Trigger: GTTTTGGCTTTGCAAATTTCAGTCTGTGGGGCCTGA...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATTATTCCTCCCTCCCTaGCCAGCCCGCAAAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLFLPP*PARKDK Trigger: TTTATCTTTGCGGGCTGGGCAGGGAGGGAGGAATAA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAATGAGCCAGAGCGCATaGCTGAACCTTAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQMSQSA*LNLKTA Trigger: TGCAGTTTTAAGGTTCAGGCATGCGCTCTGGCTCAT...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACCAGCTATTCCACTCTTaGTCTAAAGGCCAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNQLFHS*SKGQLR Trigger: TCTCAGTTGGCCTTTAGAGCAAGAGTGGAATAGCTG...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACGCGCACATAGGTAAATaGATACCAACTGCACTCTAT | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNAHIGK*IPTALY Trigger: ATAGAGTGCAGTTGGTATTCATTTACCTATGTGCGC...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATGAAAGCACACCACACTaGCAGCACGGAGGCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANESTPH*QHGGTG Trigger: ACCTGTGCCTCCGTGCTGTCAGTGTGGTGTGCTTTC...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATGTGTAAGGAGCAGATaGAGTAAGCCGTGCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQCVRSR*SKPCFK Trigger: CTTAAAGCACGGCTTACTTCATCTGCTCCTTACACA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAACATTTCCCGAGTAAATaGACACCTGTGGCACTAAGT | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQHFPSK*TPVALS Trigger: ACTTAGTGCCACAGGTGTTCATTTACTCGGGAAATG...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATAAGGCTGTGTGCACCTaGAGACTCAGGAAGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANKAVCT*RLRKGL Trigger: CAGGCCCTTCCTGAGTCTTCAGGTGCACACAGCCTT...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGAGCTAACTGTCATGTaGAACTTAACTGGAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQELTVM*NLTGTR Trigger: CCTCGTTCCAGTTAAGTTTCACATGACAGTTAGCTC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAACAAAACCCTCTGCGTaGTACCATGCATGTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQTKPSA*YHACEM Trigger: CATTTCACATGCATGGTAGCACGCAGAGGGTTTTGT...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACACAGCTATTCCACTCTTaGTCTAAAGGCCAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTQLFHS*SKGQLR Trigger: TCTCAGTTGGCCTTTAGAGCAAGAGTGGAATAGCTG...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACGAAAGTACTGTTCTGTaGGTAGACGGAATAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNESTVL*VDGIVF Trigger: AAAAACTATTCCGTCTACTCACAGAACAGTACTTTC...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACATTAGAGGCAGTACGTTaGACGGGAATAAACATTGAA | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTLEAVR*TGINIE Trigger: TTCAATGTTTATTCCCGTTCAACGTACTGCCTCTAA...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATTAGAGGCAGTACGTTaGACGGGAATAAACATTGAA | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLEAVR*TGINIE Trigger: TTCAATGTTTATTCCCGTTCAACGTACTGCCTCTAA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTAGACGGAATAGTTTTTaGTTCTTCACATCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSRRNSF*FFTSSA Trigger: TGCACTGGATGTGAAGAAGCAAAAACTATTCCGTCT...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACTTAATTGCCTTTATGTaGCAACTAACATGGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNLIAFM*QLTWMQ Trigger: CTGCATCCATGTTAGTTGGCACATAAAGGCAATTAA...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACATATAGAACAGAACCATaGAAAGAGGAGCAACTCCTA | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTYRTEP*KEEQLL Trigger: TAGGAGTTGCTCCTCTTTGCATGGTTCTGTTCTATA...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACATACTGCTTTTGAGCTaGATAACTGCTAACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: WNCQARTSMTLDTLSVSNILLLS*ITANLE Trigger: TTCCAAGTTAGCAGTTATGCAGCTCAAAAGCAGTAT...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACACAAGGCCCCGTAACGTaGGAAATTTATATAAAAACC | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTQGPVT*EIYIKT Trigger: GGTTTTTATATAAATTTCCCACGTTACGGGGCCTTG...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGTAAGAAAATACACATaGGAGGAAGAGCAAAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQVRKYT*EEEQRV Trigger: AACCCTTTGCTCTTCCTCCCATGTGTATTTTCTTAC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAATAGGAGAGAGAGACTaGGCACTATACATGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTIGERD*ALYMVL Trigger: TAAAACCATGTATAGTGCCCAGTCTCTCTCTCCTAT...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR CAA 90 bp | ACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACTTAGGTaGATCAGCAGCTTTTGTTCTGTTAGAATCCTTCAGAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: THFNDTRHTFCFQLR*ISSFCSVRILQREK Trigger: CTTCTCTCTCTGAAGGATTCTAACAGAACAAAAGCTGCTGATCAACCTAAGTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAGAAAGTACTGTTCTGTaGGTAGACGGAATAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTESTVL*VDGIVF Trigger: AAAAACTATTCCGTCTACTCACAGAACAGTACTTTC...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATTAATTGCCTTTATGTaGCAACTAACATGGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLIAFM*QLTWMQ Trigger: CTGCATCCATGTTAGTTGGCACATAAAGGCAATTAA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACACAGCTCACACTTCAGTaGAATGGCTGTTATCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MVHSSLGKNAFALLSVNTQLTLQ*NGCYQS Trigger: TGACTGATAACAGCCATTGCACTGAAGTGTGAGCTG...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACACCACAGACTGAAATTTaGAAAGCCAAAACAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTPQTEI*KAKTEE Trigger: TTCTTCTGTTTTGGCTTTGCAAATTTCAGTCTGTGG...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAACCACAGACTGAAATTTaGAAAGCCAAAACAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQPQTEI*KAKTEE Trigger: TTCTTCTGTTTTGGCTTTGCAAATTTCAGTCTGTGG...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATGCATTCAGCTGCTATaGATCTTCTTATTTCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQCIQLL*IFLFQH Trigger: GTGTTGAAATAAGAAGATGCATAGCAGCTGAATGCA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAATGCATGCATTCAGCTaGTATGCATCTTCTTATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQMHAFS*YASSYF Trigger: GAAATAAGAAGATGCATAGCAGCTGAATGCATGCAT...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATTAGTGATCTATCATTaGCAAATAGACTTGGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLVIYH*QIDLAW Trigger: CCAAGCCAAGTCTATTTGCCAATGATAGATCACTAA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATTTCCCTTCATCATCATaGGATACACACTGCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANFPSSS*DTHCSG Trigger: GCCTGAGCAGTGTGTATCCCATGATGATGAAGGGAA...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATAGTTCTTCATCAGCATaGAAAACAAGGCCCCGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANSSSSA*KTRPRN Trigger: GTTACGGGGCCTTGTTTTGCATGCTGATGAAGAACT...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCCTCAAAGTCATGCATaGATTCAGCTGCTATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANPQSHA*IQLLCI Trigger: GATGCATAGCAGCTGAATGCATGCATGACTTTGAGG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCTTCCCTCAAAGTCATaGATGCATTCAGCTGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANLPSKS*MHSAAM Trigger: CATAGCAGCTGAATGCATGCATGACTTTGAGGGAAG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATGCGCACATAGGTAAATaGATACCAACTGCACTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANAHIGK*IPTALY Trigger: ATAGAGTGCAGTTGGTATTCATTTACCTATGTGCGC...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATGCTCTAAAGGCCAACTaGGAAGCAAATTTTAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANALKAN*EANFKL Trigger: AAGCTTAAAATTTGCTTCTCAGTTGGCCTTTAGAGC...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATAGACGGAATAGTTTTTaGTTCTTCACATCCAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANRRNSF*FFTSSA Trigger: TGCACTGGATGTGAAGAAGCAAAAACTATTCCGTCT...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCAAGGCCCCGTAACGTaGGAAATTTATATAAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANQGPVT*EIYIKT Trigger: GGTTTTTATATAAATTTCCCACGTTACGGGGCCTTG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATGTAAGAAAATACACATaGGAGGAAGAGCAAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANVRKYT*EEEQRV Trigger: AACCCTTTGCTCTTCCTCCCATGTGTATTTTCTTAC...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCCACCTTGTAATATTTaGAAAAGTAGCTCCACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LTQRRTTSFVISDLSLANPPCNI*KSSSTR Trigger: TCTTGTGGAGCTACTTTTGCAAATATTACAAGGTGG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR GCA 72 bp | TCGTTTGATCCCCGACCCCAGTTATTCCTCCCTCCCTaGCCAGCCCGCAAAGATAAAGGAGTGGCGCGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SFDPRPQLFLPP*PARKDKGVARR Trigger: CCGACGCGCCACTCCTTTATCTTTGCGGGCTGGGCAGGGAGGGAGGAATAACTGGGGTCGGGGATCAAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR CCA 72 bp | CATAGGGAAGCCGTGACAAGAGGTGAGGAGACAGTGTaGAACCTCGTCACTGAGGTGGACATTAGGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HREAVTRGEETV*NLVTEVDIRRR Trigger: TCTCCTCCTAATGTCCACCTCAGTGACGAGGTTCCACACTGTCTCCTCACCTCTTGTCACGGCTTCCCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR CCA 72 bp | CTGCTGCAGCCTCCCACTCTTAGGTGTCCTTTGCTGTaGACCTGGGATTTTCCTCCTCCTTATCATTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LLQPPTLRCPLL*TWDFPPPYHSL Trigger: TAGGGAATGATAAGGAGGAGGAAAATCCCAGGTCCACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR CCA 72 bp | CAGCCTCCCACTCTTAGGTGTCCTTTGCTGTGGACCTaGGATTTTCCTCCTCCTTATCATTCCCTAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: QPPTLRCPLLWT*DFPPPYHSLGI Trigger: AATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTCCACAGCAAAGGACACCTAAGAGTGGGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR TCA 72 bp | CAGTTTGGTTCTTTATATATCCACATAGGGAAGCCGTaGCAAGAGGTGAGGAGACAGTGTGGAACCTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QFGSLYIHIGKP*QEVRRQCGTSS Trigger: TGACGAGGTTCCACACTGTCTCCTCACCTCTTGTCACGGCTTCCCTATGTGGATATATAAAGAACCAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACTTGTTTAAGTGGTTCTaGTTTTGGTACAATCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WNCQARTSMTLDTLSVSNLFKWF*FWYNPP Trigger: TGGGGGATTGTACCAAAACAAGAACCACTTAAACAA...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGCAAATAGACTTGGCTaGGTTTTTCAATGTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQANRLG*VFQCAE Trigger: CTCTGCACATTGAAAAACCAAGCCAAGTCTATTTGC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR TCA 72 bp | CTCAACTCATTTTCAGTCGAGTCTCCATACCAAGTGTaGGGAGAGGTTTTTATTTCTCTCTCTGGTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LNSFSVESPYQV*GEVFISLSGLV Trigger: TACCAGACCAGAGAGAGAAATAAAAACCTCTCCTCACACTTGGTATGGAGACTCGACTGAAAATGAGTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR GCA 72 bp | TATATAAAAACCTTTGATAAAAAGCCACCTTACTGCTaGAGCCTCCCACTCTTAGGTGTCCTTTGCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YIKTFDKKPPYC*SLPLLGVLCCG Trigger: TCCACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAGTAAGGTGGCTTTTTATCAAAGGTTTTTATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR CCA 72 bp | TATCAAAGAGGTAATCTGCACAATACCAAGCCACAGTaGAAGAGTGATGTATGGCAAACAGACTCTTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: YQRGNLHNTKPQ*KSDVWQTDSYP Trigger: TGGGTAAGAGTCTGTTTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACATCACAGGGTGCTTCGTaGTTCAAATTTGTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTSQGAS*FKFVSF Trigger: AAAGGAAACAAATTTGAACAACGAAGCACCCTGTGA...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATGTTTCCAACTTAGGTaGATCAGCAGCTTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQCFQLR*ISSFCS Trigger: AGAACAAAAGCTGCTGATCAACCTAAGTTGGAAACA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR GCA 72 bp | ATTTATATAAAAACCTTTGATAAAAAGCCACCTTACTaGTGCAGCCTCCCACTCTTAGGTGTCCTTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IYIKTFDKKPPY*CSLPLLGVLCC Trigger: ACAGCAAAGGACACCTAAGAGTGGGAGGCTGCAGCAGTAAGGTGGCTTTTTATCAAAGGTTTTTATATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACATGTTTCCAACTTAGGTaGATCAGCAGCTTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MVHSSLGKNAFALLSVNTCFQLR*ISSFCS Trigger: AGAACAAAAGCTGCTGATCAACCTAAGTTGGAAACA...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATTGGTACACTCTTCTCTaGGGAAGAATGCTTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LTQRRTTSFVISDLSLANWYTLL*GRMLLH Trigger: GTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCA...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR GCA 72 bp | AAGAAAACCAGTCTTAACTTCCCTCAAAGTCATGCATaGATTCAGCTGCTATGCATCTTCTTATTTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: KKTSLNFPQSHA*IQLLCIFLFQH Trigger: GTGTTGAAATAAGAAGATGCATAGCAGCTGAATGCATGCATGACTTTGAGGGAAGTTAAGACTGGTTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATTTGTTTAAGTGGTTCTaGTTTTGGTACAATCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTQRRTTSFVISDLSLANLFKWF*FWYNPP Trigger: TGGGGGATTGTACCAAAACAAGAACCACTTAAACAA...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACATCCTCCTCATGCTGCTaGGCCACTGTCCTCGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTSSSCC*ATVLER Trigger: TCGCTCGAGGACAGTGGCTCAGCAGCATGAGGAGGA...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATCCTCCTCATGCTGCTaGGCCACTGTCCTCGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQSSSCC*ATVLER Trigger: TCGCTCGAGGACAGTGGCTCAGCAGCATGAGGAGGA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAACGCGGCCGTATATCCTaGTCACTATCCGGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQRGRIS*SLSGMV Trigger: GACCATCCCGGATAGTGAGCAGGATATACGGCCGCG...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTCAGACTGCAAGGCTGTaGCAACAGACGAGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFQTARL*QQTRDT Trigger: AGTGTCTCTCGTCTGTTGCCACAGCCTTGCAGTCTG...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACCTCGTCGCCAGCCAGTaGAAAGAGGTTCTCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WNCQARTSMTLDTLSVSNLVASQ*KEVLNE Trigger: TTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAG...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTGAAGGCACTGCAAGCTaGTTCCTGTACTCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFEGTAS*FLYSLV Trigger: AACAAGAGAGTACAGGAAGCAGCTTGCAGTGCCTTC...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTCAAAGAGGTTCTCAATaGAGGAATCGATGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFQRGSQ*RNRCAA Trigger: TGCTGCACATCGATTCCTTCATTGAGAACCTCTTTG...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAACTCGTCGCCAGCCAGTaGAAAGAGGTTCTCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLVASQ*KEVLNE Trigger: TTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAG...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACGAAGGCACTGCAAGCTaGTTCCTGTACTCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WNCQARTSMTLDTLSVSNEGTAS*FLYSLV Trigger: AACAAGAGAGTACAGGAAGCAGCTTGCAGTGCCTTC...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTGAGCATTGTTTAGCATaGCTTGTGCCAGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFEHCLA*LVPESS Trigger: AGAAGACTCTGGCACAAGCCATGCTAAACAATGCTC...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTACTCATACTCCATCTTaGTTTGCCGGTCCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSTHTPS*FAGPTP Trigger: TGGTGTGGGACCGGCAAACCAAGATGGAGTATGAGT...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAACTATGTTGTGCATATaGGGAAGCAGGCGATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTTMLCI*GSRRSI Trigger: GATGGATCGCCTGCTTCCTCATATGCACAACATAGT...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTCGACTGATGATGAACTaGTTGACACATGCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSRLMMN*LTHATA Trigger: TGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCG...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTAGGTTTACGCAACGCTaGTATACAGGTTCACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFRFTQR*YTGSQY Trigger: ATATTGTGAACCTGTATATCAGCGTTGCGTAAACCT...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCGCGGCCGTATATCCTaGTCACTATCCGGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANRGRIS*SLSGMV Trigger: GACCATCCCGGATAGTGAGCAGGATATACGGCCGCG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTCCTGTACTCTCTTGTTaGTATCGAGGATACGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSPVLSC*YRGYAS Trigger: TGAAGCGTATCCTCGATAGCAACAAGAGAGTACAGG...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGCATTTTATCCTGCATaGACTGGTACATCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQAFYPA*TGTSAS Trigger: TGACGCTGATGTACCAGTGCATGCAGGATAAAATGC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTGCATTTTATCCTGCATaGACTGGTACATCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSAFYPA*TGTSAS Trigger: TGACGCTGATGTACCAGTGCATGCAGGATAAAATGC...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTTATACCCATTTGGATTaGTATTTCCCCAATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSYTHLD*YFPNRP Trigger: TGGGCGATTGGGGAAATATCAATCCAAATGGGTATA...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACATATACCCATTTGGATTaGTATTTCCCCAATCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTYTHLD*YFPNRP Trigger: TGGGCGATTGGGGAAATATCAATCCAAATGGGTATA...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTTTACAAGTACATCTTTaGATATTGGCTGTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGASACHRVLRCSNLFPFLQVHL*ILAVQP Trigger: TGGCTGAACAGCCAATATGCAAAGATGTACTTGTAA...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACACTCCTAAAACCAAGATaGCAGATTCTTTCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTLLKPR*QILSQP Trigger: GGGTTGTGAAAGAATCTGGCATCTTGGTTTTAGGAG...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACAACGACCAATTGTTATTaGTGTGTTCTCCAACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTTTNCY*CVLQQR Trigger: ACGCTGTTGGAGAACACAGCAATAACAATTGGTCGT...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACAGCTACATTCTCATCTTaGTCTTGGGTTCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTATFSS*SWVLCS Trigger: GCTGCAGAGAACCCAAGACCAAGATGAGAATGTAGC...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGGGATTTTCCTCCTCCTTATCATTCCCTAGGCATTGTTTAAGTGGTTCTCAATTCTTTCAAAAGTaGCAGAATGTGCGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLGFSSSLSFPRHCLSGSQFFQK*QNVRQK Trigger: CTTTTGCCGCACATTCTGCCACTTTTGAAAGAATTG...AGAACCACTTAAACAATGCCTAGGGAATGATAAGGAGGAGGAAAATCCCAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCGTGCTTTAAGCATGCCAAGAGGCAGAAACACTGGAATGTAACAATGACACAATTCTTTCAAAAGTaGCAGAATGTGCGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPCFKHAKRQKHWNVTMTQFFQK*QNVRQK Trigger: CTTTTGCCGCACATTCTGCCACTTTTGAAAGAATTG...TGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCAGACTGCAAGGCTGTaGCAACAGACGAGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANQTARL*QQTRDT Trigger: AGTGTCTCTCGTCTGTTGCCACAGCCTTGCAGTCTG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACATTATCCTGCATGCACTaGTACATCAGCGTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTLSCMH*YISVRM Trigger: CATCCTGACGCTGATGTACCAGTGCATGCAGGATAA...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACACAAAGAGGTTCTCAATaGAGGAATCGATGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTQRGSQ*RNRCAA Trigger: TGCTGCACATCGATTCCTTCATTGAGAACCTCTTTG...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACATCAACTTTGGTAGATaGCTTACAAGTACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WNCQARTSMTLDTLSVSNINFGR*LTSTSL Trigger: CAAAGATGTACTTGTAAGGCATCTACCAAAGTTGAT...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACAGAGCATTGTTTAGCATaGCTTGTGCCAGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTEHCLA*LVPESS Trigger: AGAAGACTCTGGCACAAGCCATGCTAAACAATGCTC...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACACTCCTAAAACCAAGATaGCAGATTCTTTCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTLLKPR*QILSQP Trigger: GGGTTGTGAAAGAATCTGGCATCTTGGTTTTAGGAG...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATTTATCCTGCATGCACTaGTACATCAGCGTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANLSCMH*YISVRM Trigger: CATCCTGACGCTGATGTACCAGTGCATGCAGGATAA...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATCGACTGATGATGAACTaGTTGACACATGCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANRLMMN*LTHATA Trigger: TGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCG...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATACGACCAATTGTTATTaGTGTGTTCTCCAACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANTTNCY*CVLQQR Trigger: ACGCTGTTGGAGAACACAGCAATAACAATTGGTCGT...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATAGGTTTACGCAACGCTaGTATACAGGTTCACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQRRTTSFVISDLSLANRFTQR*YTGSQY Trigger: ATATTGTGAACCTGTATATCAGCGTTGCGTAAACCT...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTACACTCTTCTCTTGGGAAGAATGCTTTTGCACTGCTATCTGTTAATACAATCAACTTTGGTAGATaGCTTACAAGTACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVHSSLGKNAFALLSVNTINFGR*LTSTSL Trigger: CAAAGATGTACTTGTAAGGCATCTACCAAAGTTGAT...TGTATTAACAGATAGCAGTGCAAAAGCATTCTTCCCAAGAGAAGAGTGTACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| 3UTR CAA 72 bp | AGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATaGGCAAATAGACTTGGCTTGGTTTTTCAATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTTSFVISDLS*ANRLGLVFQCA Trigger: TGCACATTGAAAAACCAAGCCAAGTCTATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS GCA 90 bp | CCGGCACACGTTCTTCCGCACCTCTGCTTCCTCGTCGCCAGCCAGTaGAAAGAGGTTCTCAATGAAGGAATCGATGTGCAGCATGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PAHVLPHLCFLVASQ*KEVLNEGIDVQHER Trigger: GCGCTCATGCTGCACATCGATTCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGGAAGAACGTGTGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACCACTCATACTCCATCTaGGTTTGCCGGTCCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: WNCQARTSMTLDTLSVSNHSYSI*VCRSHT Trigger: GGTGTGGGACCGGCAAACCAAGATGGAGTATGAGTG...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTTTGGGGATCATGATGTaGAGAGGGCGATCTAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SGASACHRVLRCSNLFPFLGIMM*RGRSKT Trigger: TGTCTTAGATCGCCCTCTCAACATCATGATCCCCAA...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS GCA 90 bp | CAAAAGTGGCAGAATGTGCGGCAAAAGCTCATCACGATAAACATTTaGGAGAACATCGAGAGCAGCAGCAGAACACTTTCTCAGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QKWQNVRQKLITINI*ENIESSSRTLSQVP Trigger: TGGAACCTGAGAAAGTGTTCTGCTGCTGCTCTCGATGTTCTCGCAAATGTTTATCGTGATGAGCTTTTGCCGCACATTCTGCCACTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACTTGGGGATCATGATGTaGAGAGGGCGATCTAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: WNCQARTSMTLDTLSVSNLGIMM*RGRSKT Trigger: TGTCTTAGATCGCCCTCTCAACATCATGATCCCCAA...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACAGCTACATTCTCATCTaGGTCTTGGGTTCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WNCQARTSMTLDTLSVSNSYILI*VLGSLQ Trigger: CTGCAGAGAACCCAAGACCAAGATGAGAATGTAGCT...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAAGACGACCAATTGTTATaGCTGTGTTCTCCAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQDDQLL*LCSPTA Trigger: CGCTGTTGGAGAACACAGCAATAACAATTGGTCGTC...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGCGCGTCGGCATGTCACAGGGTGCTTCGTTGTTCAAATTTGTTTCCTTTTTTTAGACATTCACTCTaGATGAAGTCTGTCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: SGASACHRVLRCSNLFPFFRHSL*MKSVTP Trigger: TGGTGTGACAGACTTCATCAAGAGTGAATGTCTAAA...AAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCGCCACT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTGCCAAGCACGCACTTCAATGACACTAGACACACTTTCTGTTTCCAACCTTACAAGTACATCTTaGCATATTGGCTGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WNCQARTSMTLDTLSVSNLTSTS*HIGCSA Trigger: GGCTGAACAGCCAATATGCAAAGATGTACTTGTAAG...GTTGGAAACAGAAAGTGTGTCTAGTGTCATTGAAGTGCGTGCTTGGCAGTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAACTTACAAGTACATCTTaGCATATTGGCTGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQLTSTS*HIGCSA Trigger: GGCTGAACAGCCAATATGCAAAGATGTACTTGTAAG...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGGTAATCTGCACAATACCAAGCCACAGTGGAAGAGTGATGTATGGCAATTTAGACATTCACTCTaGATGAAGTCTGTCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: QRGNLHNTKPQWKSDVWQFRHSL*MKSVTP Trigger: TGGTGTGACAGACTTCATCAAGAGTGAATGTCTAAA...TTGCCATACATCACTCTTCCACTGTGGCTTGGTATTGTGCAGATTACCTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS-3UTR CAA 90 bp | CTTACCCAAAGGAGAACTACTAGCTTTGTAATTAGTGATCTATCATTGGCAAATGACGACCAATTGTTATaGCTGTGTTCTCCAACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTQRRTTSFVISDLSLANDDQLL*LCSPTA Trigger: CGCTGTTGGAGAACACAGCAATAACAATTGGTCGTC...ATTTGCCAATGATAGATCACTAATTACAAAGCTAGTAGTTCTCCTTTGGGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 |
||
| CDS GCA 72 bp | CATCACAAGCGCCCGGCACACGTTCTTCCGCACCTCTaGTTCCTCGTCGCCAGCCAGTGCAAAGAGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HHKRPAHVLPHL*FLVASQCKEVL Trigger: GAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGGAAGAACGTGTGCCGGGCGCTTGTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS GCA 72 bp | GTTCTTCCGCACCTCTGCTTCCTCGTCGCCAGCCAGTaGAAAGAGGTTCTCAATGAAGGAATCGATGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLPHLCFLVASQ*KEVLNEGIDVQ Trigger: CTGCACATCGATTCCTTCATTGAGAACCTCTTTGCACTGGCTGGCGACGAGGAAGCAGAGGTGCGGAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS GCA 72 bp | GCCAGTGCAAAGAGGTTCTCAATGAAGGAATCGATGTaGAGCATGAGCGCCTGGGTCCGACTGATGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASAKRFSMKESM*SMSAWVRLMMN Trigger: GTTCATCATCAGTCGGACCCAGGCGCTCATGCTGCACATCGATTCCTTCATTGAGAACCTCTTTGCACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS CAA 72 bp | TTCACAGGCCTCCAGAGCTACATTCTCATCTTGGTCTaGGGTTCTCTGCAGCATGTACTCGACTATGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FTGLQSYILILV*GSLQHVLDYVV Trigger: CACAACATAGTCGAGTACATGCTGCAGAGAACCCAAGACCAAGATGAGAATGTAGCTCTGGAGGCCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||
| CDS CAA 90 bp | TCAAAAGTGGCAGAATGTGCGGCAAAAGCTCATCACGATAAACATTaGCGAGAACATCGAGAGCAGCAGCAGAACACTTTCTCAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVAECAAKAHHDKH*REHREQQQNTFSGS Trigger: GGAACCTGAGAAAGTGTTCTGCTGCTGCTCTCGATGTTCTCGCAAATGTTTATCGTGATGAGCTTTTGCCGCACATTCTGCCACTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109399.9 ENSMUST00000109401.8 ENSMUST00000179301.8 |
||