Pregenerated sensors for TNKS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024811Ensembl transcript IDs: ENSMUST00000025729.12, ENSMUST00000164665.2, ENSMUST00000167724.2, ENSMUST00000168718.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGCCAAGGAGTaGAACTTAAGAGGCCGTCAGCTGCTTCAGGACATTTCGTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CHRPVVSMNCFPAKE*NLRGRQLLQDISSG Trigger: CCCAGACGAAATGTCCTGAAGCAGCTGACGGCCTCTTAAGTTTCACTCCTTGGCAGGAAAACAATTCATGCTGACTACAGGCCTGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR TCA 90 bp | AGAGCACTAAGAGTTCAGAAGCTGGGGCTTAGCATCTTCAAAACTTaGAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RALRVQKLGLSIFKT*REFCSEVEDIRDLS Trigger: AGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTCAAGTTTTGAAGATGCTAAGCCCCAGCTTCTGAACTCTTAGTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 90 bp | AAAGCACTAAACCACACCCCCAAACTCCCAGCTCCCAATAAACATTaGCATGCCAGCGTATTGACCACAATGGGAACACACATAAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: KALNHTPKLPAPNKH*HASVLTTMGTHISN Trigger: ATTGCTTATGTGTGTTCCCATTGTGGTCAATACGCTGGCATGGCAATGTTTATTGGGAGCTGGGAGTTTGGGGGTGTGGTTTAGTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 90 bp | TTCATCAAGTCACAACGCTGGGCTTCGTTCACATTTTATCATTTGTaGCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGCCAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FIKSQRWASFTFYHL*HRPVVSMNCFPAKE Trigger: CTCCTTGGCAGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAACGAAGCCCAGCGTTGTGACTTGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR TCA 90 bp | ACGACAGATGAAACACGGATGAGCAACACATATGAAAATACTCTGTaGACCGCTGCAGCTCTAGAACAGTTTATAGTACAAAGCGATGTA | + |
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Preference number: 1 (lower is better) Translates to: TTDETRMSNTYENTL*TAAALEQFIVQSDV Trigger: TACATCGCTTTGTACTATAAACTGTTCTAGAGCTGCAGCGGTTCACAGAGTATTTTCATATGTGTTGCTCATCCGTGTTTCATCTGTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 90 bp | TTTAGATTTAAGGTAATTAGACCTGATTGGGAAATTATCCACCATTaGCTTCCCCGTGTCCACTTACAGTTCACGATCAGAGCACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: FRFKVIRPDWEIIHH*LPRVHLQFTIRALR Trigger: TCTTAGTGCTCTGATCGTGAACTGTAAGTGGACACGGGGAAGGCAATGGTGGATAATTTCCCAATCAGGTCTAATTACCTTAAATCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR CCA 90 bp | CACTTGTTATTCCTCCGTTTTAGATTTAAGGTAATTAGACCTGATTaGGAAATTATCCACCATTGCCTTCCCCGTGTCCACTTACAGTTC | + |
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Preference number: 1 (lower is better) Translates to: HLLFLRFRFKVIRPD*EIIHHCLPRVHLQF Trigger: GAACTGTAAGTGGACACGGGGAAGGCAATGGTGGATAATTTCCCAATCAGGTCTAATTACCTTAAATCTAAAACGGAGGAATAACAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR GCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACACATTTTATCATTTGTaGCACAGGCCTGTAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYTFYHL*HRPVVS Trigger: GCTGACTACAGGCCTGTGGCACAAATGATAAAATGT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR GCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACAATTTCTTCCACAGCTaGCATACTGAACTTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYNFFHS*HTELEP Trigger: AGGCTCAAGTTCAGTATGGCAGCTGTGGAAGAAATT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR CAA 90 bp | GTTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATaGTTTTCCTGCCAAGGAGTGAAACTTAAGAGGCCGTCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VHILSFVPQACSQHE*FSCQGVKLKRPSAA Trigger: AGCAGCTGACGGCCTCTTAAGTTTCACTCCTTGGCAGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR CAA 90 bp | AGCTTCATCAAGTCACAACGCTGGGCTTCGTTCACATTTTATCATTaGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SFIKSQRWASFTFYH*CHRPVVSMNCFPAK Trigger: CTTGGCAGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAACGAAGCCCAGCGTTGTGACTTGATGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGAGCATCTTCAAAACTTaGAGAGAGTTCTGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VDKNLSLISECTAMQYGRSIFKT*REFCSE Trigger: CTCAGAGCAGAACTCTCTTCAAGTTTTGAAGATGCT...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | CATCATGAAGCATCTGAGCAAGTATGGCCACCACATTCTACATCTTACATTTATGCCATGCCAGCGTATTaGCCACAATGGGAACACACA | + |
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Preference number: 2 (lower is better) Translates to: HHEASEQVWPPHSTSYIYAMPAY*PQWEHT Trigger: TGTGTGTTCCCATTGTGGTCAATACGCTGGCATGGC...ATAAATGTAAGATGTAGAATGTGGTGGCCATACTTGCTCAGATGCTTCATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR GCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAGCCCATTCCAGAGGCTaGCACAGACACAGACACTCA | + |
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Preference number: 2 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTAHSRG*HRHRHS Trigger: TGAGTGTCTGTGTCTGTGGCAGCCTCTGGAATGGGC...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CCA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAATCAAGTCACAACGCTaGGCTTCGTTCACATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KQLDHIIRGHARSANSKQIKSQR*ASFTFY Trigger: ATAAAATGTGAACGAAGCCCAGCGTTGTGACTTGAT...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGTCATACTGGATGGTGTGGACGCCAAACACATCTTACCTTCATCATGAACATCTGTTAAAGTGCTaGGAACAGGAAACACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PKSYWMVWTPNTSYLHHEHLLKC*EQETLR Trigger: TCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATG...TTCATGATGAAGGTAAGATGTGTTTGGCGTCCACACCATCCAGTATGACTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGTCATACTGGATGGTGTGGACGCCAAACACATCTTACCTTCATCATGAAGATGAGCAACACATATaGAAATACTCTGTGAACCGC | + |
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Preference number: 2 (lower is better) Translates to: PKSYWMVWTPNTSYLHHEDEQHI*KYSVNR Trigger: GCGGTTCACAGAGTATTTTCATATGTGTTGCTCATC...TTCATGATGAAGGTAAGATGTGTTTGGCGTCCACACCATCCAGTATGACTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACCAGGTCTCTGTGCAATaGAAGATGCTAAGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNQVSVQ*KMLSVR Trigger: CCTTACACTTAGCATCTTGCATTGCACAGAGACCTG...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCATTTCCTGCCAAGGAGTaGAACTTAAGAGGCCGTCAG | + |
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Preference number: 2 (lower is better) Translates to: YKSISRSGFDLLTLDHNSFPAKE*NLRGRQ Trigger: CTGACGGCCTCTTAAGTTTCACTCCTTGGCAGGAAA...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CCA 90 bp | CCATCACTCTCTTCTTATGGAACACTGAAGACTAATTACAGACATGTCATTAGCCTACCAAAGTCATACTaGATGGTGTGGACGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PSLSSYGTLKTNYRHVISLPKSY*MVWTPN Trigger: GTTTGGCGTCCACACCATCCAGTATGACTTTGGTAG...GCTAATGACATGTCTGTAATTAGTCTTCAGTGTTCCATAAGAAGAGAGTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CCA 90 bp | CATCATGAAGCATCTGAGCAAGTATGGCCACCACATTCTACATCTTACATTTATGTAATTAGACCTGATTaGGAAATTATCCACCATTGC | + |
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Preference number: 2 (lower is better) Translates to: HHEASEQVWPPHSTSYIYVIRPD*EIIHHC Trigger: GCAATGGTGGATAATTTCCCAATCAGGTCTAATTAC...ATAAATGTAAGATGTAGAATGTGGTGGCCATACTTGCTCAGATGCTTCATGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR TCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAGACCATGATTCTACATaGAAAACAATTCCAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTDHDST*KTIPDP Trigger: TGGATCTGGAATTGTTTTTCATGTAGAATCATGGTC...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR GCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACATATAAAGGTATTTCATaGAAAGCACTAAACCACACC | + |
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Preference number: 2 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTYKGIS*KALNHT Trigger: GGTGTGGTTTAGTGCTTTGCATGAAATACCTTTATA...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 72 bp | AACCACACCCCCAAACTCCCAGCTCCCAATAAACATTaGCATGCCAGCGTATTGACCACAATGGGAACACAC | + |
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Preference number: 3 (lower is better) Translates to: NHTPKLPAPNKH*HASVLTTMGTH Trigger: GTGTGTTCCCATTGTGGTCAATACGCTGGCATGGCAATGTTTATTGGGAGCTGGGAGTTTGGGGGTGTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGTTCACATTTTATCATTaGTGCCACAGGCCTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: ALRSRTSETSLEQDPELKFTFYH*CHRPVV Trigger: GACTACAGGCCTGTGGCACAAATGATAAAATGTGAA...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CAA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGACTGGGCAGAATGCCTaGACAGAAGTAGGAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: VDKNLSLISECTAMQYGRTGQNA*TEVGST Trigger: AGTGCTTCCTACTTCTGTCAAGGCATTCTGCCCAGT...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 72 bp | TCCCCATCACGTCACACCAGAGCTCTCTGGGATGTGTaGCTTCTAGACACAAAGGCATCACCAATTAAATTC | + |
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Preference number: 3 (lower is better) Translates to: SPSRHTRALWDV*LLDTKASPIKF Trigger: GAATTTAATTGGTGATGCCTTTGTGTCTAGAAGGCACACATCCCAGAGAGCTCTGGTGTGACGTGATGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR TCA 72 bp | CCTGTAGTCAGCATGAATTGTTTTCCTGCCAAGGAGTaGAACTTAAGAGGCCGTCAGCTGCTTCAGGACATT | + |
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Preference number: 3 (lower is better) Translates to: PVVSMNCFPAKE*NLRGRQLLQDI Trigger: AATGTCCTGAAGCAGCTGACGGCCTCTTAAGTTTCACTCCTTGGCAGGAAAACAATTCATGCTGACTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR TCA 72 bp | AGAGTTCAGAAGCTGGGGCTTAGCATCTTCAAAACTTaGAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGA | + |
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Preference number: 3 (lower is better) Translates to: RVQKLGLSIFKT*REFCSEVEDIR Trigger: TCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTCAAGTTTTGAAGATGCTAAGCCCCAGCTTCTGAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 72 bp | GTGTACCGCCATGCAGTACGGCAGGTCTCTGTGCAATaGAAGATGCTAAGTGTAAGGCTTACATTAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VYRHAVRQVSVQ*KMLSVRLTLEN Trigger: ATTCTCTAATGTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGGCGGTACAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR CCA 72 bp | TGCCTCAATCTTCAAACAACTGGATCACATCATACGTaGGCATGCACGCTCAGCAAACAGCAAGCAAACACT | + |
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Preference number: 3 (lower is better) Translates to: CLNLQTTGSHHT*ACTLSKQQANT Trigger: AGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTTGAAGATTGAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR TCA 72 bp | ACCCAGTTGAACCTGGAATGGCATCTGTTAAAGTGCTaGGAACAGGAAACACTCAGAAACACTGTACACTGT | + |
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Preference number: 3 (lower is better) Translates to: TQLNLEWHLLKC*EQETLRNTVHC Trigger: ACAGTGTACAGTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTCAACTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 72 bp | GCAAGTATGGCCACCACATTCTACATCTTACATTTATaGTGCACCCTGTCACGATTAGACTCAAAACTACAC | + |
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Preference number: 3 (lower is better) Translates to: ASMATTFYILHL*CTLSRLDSKLH Trigger: GTGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAATGTGGTGGCCATACTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR CCA 72 bp | TTCCTCCGTTTTAGATTTAAGGTAATTAGACCTGATTaGGAAATTATCCACCATTGCCTTCCCCGTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: FLRFRFKVIRPD*EIIHHCLPRVH Trigger: GTGGACACGGGGAAGGCAATGGTGGATAATTTCCCAATCAGGTCTAATTACCTTAAATCTAAAACGGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR GCA 72 bp | AGTATGGCCACCACATTCTACATCTTACATTTATGCTaGACCCTGTCACGATTAGACTCAAAACTACACTGT | + |
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Preference number: 3 (lower is better) Translates to: SMATTFYILHLC*TLSRLDSKLHC Trigger: ACAGTGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAATGTGGTGGCCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| 3UTR-3UTR CAA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCATGTAGTCAGCATGAATaGTTTTCCTGCCAAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: YKSISRSGFDLLTLDHNSCSQHE*FSCQGV Trigger: CACTCCTTGGCAGGAAAACAATTCATGCTGACTACA...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR GCA 90 bp | AGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGGCGGGGTGGACTTCCTaGCCGCCGTGTCGCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SSALRSRTSETSLEQDPEAGWTS*PPCRGC Trigger: ACAGCCGCGACACGGCGGGCAGGAAGTCCACCCCGC...CTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGCGAAGTGGAGCGGGGTaGACTTCCTGCCCGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKRSGAG*TSCPPC Trigger: ACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCG...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CCA 90 bp | AGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGACAGAGCATCTGCAGTaGCTCCGGGGCCCCTCACGC | + |
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Preference number: 4 (lower is better) Translates to: SSALRSRTSETSLEQDPETEHLQ*LRGPSR Trigger: GCGTGAGGGGCCCCGGAGCCACTGCAGATGCTCTGT...CTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR GCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGGCTCCACGTCCCCGTTaGGGCAAGCCTCGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKAPRPR*GKPRTA Trigger: AGCTGTTCGAGGCTTGCCGCAACGGGGACGTGGAGC...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR TCA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAGCGTCACCAGCCTCTTaGCTCGCTCCACGTCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: KQLDHIIRGHARSANSKQASPAS*LAPRPR Trigger: ACGGGGACGTGGAGCGAGTCAAGAGGCTGGTGACGC...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACAAACCTGCGGCGAAGTaGAGCGGGGTGGACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: EESSALRSRTSETSLEQDKPAAK*SGVDFL Trigger: CAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTT...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACTGGCTGCAGAGAGGCTaGATGGGCTGGACGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYWLQRG*MGWTDL Trigger: CAGGTCCGTCCAGCCCATCCAGCCTCTCTGCAGCCA...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGAGTTGTCGAGGCTGCTaGCTGCAGAGAGGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKSCRGC*LQRGWM Trigger: CATCCAGCCTCTCTGCAGCCAGCAGCCTCGACAACT...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR TCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGAAGACGCCGCCTGCGTaGCCACCATCTCTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VDKNLSLISECTAMQYGRKTPPA*PPSLCS Trigger: GGAGCACAGAGATGGTGGTCACGCAGGCGGCGTCTT...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR TCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTTGGGCTGGACGGACCTaGAGACAGAGCATCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSWAGRT*RQSICS Trigger: ACTGCAGATGCTCTGTCTTCAGGTCCGTCCAGCCCA...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR GCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACCTGCCACAGGTCCATTaGATTCACACAGGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYLPQVH*IHTGTV Trigger: CACGGTGCCTGTGTGAATGCAATGGACCTGTGGCAG...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGTCTGTCTTTGTGAATTaGACATCCGGTGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSALRSRTSETSLEQDPESVFVN*TSGATS Trigger: GGAGGTGGCACCGGATGTCCAATTCACAAAGACAGA...CTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTATAAGTTGTCGAGGCTaGTGGCTGCAGAGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSISCRG*WLQRGW Trigger: CCAGCCTCTCTGCAGCCAGCAGCCTCGACAACTTAT...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGCCTCATTGCCACTCCTaGCACTTTCCAGAAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKPHCHS*HFPEVH Trigger: ATGAACTTCTGGAAAGTGCCAGGAGTGGCAATGAGG...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGTGGACATCAGCCCCATaGTGCAGTAACAGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSALRSRTSETSLEQDPEWTSAP*CSNSCT Trigger: TGTACAACTGTTACTGCACCATGGGGCTGATGTCCA...CTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTACCTTCTGCTGCACTTaGACTAACCACTGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSTFCCT*TNHCGQ Trigger: CTGTCCGCAGTGGTTAGTTCAAGTGCAGCAGAAGGT...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGGTTGGCTCAGCTCCATaGTGTAAAAGCACAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKVGSAP*CKSTMQ Trigger: TTGCATTGTGCTTTTACAGCATGGAGCTGAGCCAAC...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGCCTGTTCTTAGAAGCTaGCTCATGAAGAGGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKPVLRS*LMKRSE Trigger: TTCACTCCTCTTCATGAGGCAGCTTCTAAGAACAGG...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACCCCTCTTGGAGCAGCTaGTGCACATTTTCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYPSWSS*CTFSFP Trigger: GGGAAATGAAAATGTGCAGCAGCTGCTCCAAGAGGG...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGGCAGTTGACATTCAATaGTGTAAGCAGGGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKAVDIQ*CKQGHH Trigger: ATGATGGCCCTGCTTACACCATTGAATGTCAACTGC...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGCTGCCATCACTTGCATaGCAGTTGACATTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKLPSLA*QLTFNG Trigger: ACCATTGAATGTCAACTGCCATGCAAGTGATGGCAG...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGTTGACTACTTCAGCATaGCCAAAAGAGCATGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSALRSRTSETSLEQDPELTTSA*PKEHAL Trigger: TAACGCATGCTCTTTTGGTCATGCTGAAGTAGTCAA...CTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAACTTCATGTAACGGTGTaGAAGCCCATTTGTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQLDHIIRGHARSANSKQLHVTV*KPICPW Trigger: CCACGGACAAATGGGCTTTCACACCGTTACATGAAG...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | CATCATGAAGCATCTGAGCAAGTATGGCCACCACATTCTACATCTTACATTTATCGGCCAGTGACCGAGTaGTGGCCGGGAGGAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HHEASEQVWPPHSTSYIYRPVTE*WPGGEC Trigger: ACATTCTCCTCCCGGCCATCACTCGGTCACTGGCCG...ATAAATGTAAGATGTAGAATGTGGTGGCCATACTTGCTCAGATGCTTCATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGACAGTTCCGAGAAGCTaGCAGATAAGTTGTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDKNLSLISECTAMQYGRTVPRS*QISCRG Trigger: GCCTCGACAACTTATCTGGCAGCTTCTCGGAACTGT...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTCATACTGGATGGTGTGGACGCCAAACACATCTTACCTTCATCATGAATACCCAGCTGCAAAGTaGAGTGGGGTTGACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSYWMVWTPNTSYLHHEYPAAK*SGVDWR Trigger: ACGCCAGTCAACCCCACTCCACTTTGCAGCTGGGTA...TTCATGATGAAGGTAAGATGTGTTTGGCGTCCACACCATCCAGTATGACTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACGGGTCTGCACCATGCTaGAGTAGAAGTTTGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: EESSALRSRTSETSLEQDGSAPC*SRSLHI Trigger: AATATGCAAACTTCTACTCCAGCATGGTGCAGACCC...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCCTCATGAAGAGGAGTaGACTGCCACAGGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHPHEEE*TATGPL Trigger: CAATGGACCTGTGGCAGTTCACTCCTCTTCATGAGG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR TCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACAACCCTGAAGGGATATaGTGTTTGGATCACACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYNPEGI*CLDHTH Trigger: ATGGGTGTGATCCAAACATCATATCCCTTCAGGGTT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTCGTTATGTAAAGGAATaGGTCCTCCTTTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSRYVKE*VLLCPG Trigger: CCCAGGACAAAGGAGGACTCATTCCTTTACATAACG...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCATTTTCATTGCGCTaGACTGCAAGAAAGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EESSALRSRTSETSLEQDPFSLR*TARKTF Trigger: GAAAGTCTTTCTTGCAGTTCAGCGCAATGAAAATGG...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGATATCTGCTTTCTTTTaGGATATGGAGATGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKISAFF*DMEMQQ Trigger: CTGCTGCATCTCCATATCCCAAAAGAAAGCAGATAT...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GTGATACAAGTAGACACTCAGATGGGCAGAACACTACACACACACACATACACATTAGAAGCTGCCTCATaGAGAGGAGTGAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VIQVDTQMGRTLHTHTYTLEAAS*RGVNCH Trigger: GTGGCAGTTCACTCCTCTTCATGAGGCAGCTTCTAA...TGTGTATGTGTGTGTGTGTAGTGTTCTGCCCATCTGAGTGTCTACTTGTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTTGTTTGCTCCCTTTCTaGGCAGCAGTTCACATATCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSCLLPF*AAVHIS Trigger: AGATATGTGAACTGCTGCTCAGAAAGGGAGCAAACA...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGCTGTCAAGAGTGCACTaGCATCATCTGCTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: VDKNLSLISECTAMQYGRLSRVH*HHLLKL Trigger: TAGTTTCAGCAGATGATGTCAGTGCACTCTTGACAG...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGACATCAGCTCCATGTTaGAATAAATACTCAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ALRSRTSETSLEQDPELKTSAPC*NKYSAT Trigger: AGTTGCTGAGTATTTATTGCAACATGGAGCTGATGT...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGTTGAAGACGCCGCCTaGGTGACCACCATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTFYHLCHRPVVSMNCFPVEDAA*VTTISV Trigger: CACAGAGATGGTGGTCACGCAGGCGGCGTCTTCAAC...AGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACTGGAGTGGGGTTGACTaGCGTCCTTCAATGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNWSGVD*RPSMSL Trigger: CAGAGACATTGAAGGACGCCAGTCAACCCCACTCCA...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACTCTTTCAGTTCCTTGTaGCCCATTTCAACTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYSFSSL*PISTRT Trigger: TGTCCTAGTTGAAATGGGCCACAAGGAACTGAAAGA...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GTGATACAAGTAGACACTCAGATGGGCAGAACACTACACACACACACATACACATCAACAACATCATTGTaGGCGTTCTCAGAAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VIQVDTQMGRTLHTHTYTSTTSL*AFSEAT Trigger: CGTGGCTTCTGAGAACGCTCACAATGATGTTGTTGA...TGTGTATGTGTGTGTGTGTAGTGTTCTGCCCATCTGAGTGTCTACTTGTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR TCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACAAGGCGGTGAAACCCTaGAGGGATATGATGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHKAVKP*RDMMFG Trigger: TCCAAACATCATATCCCTTCAGGGTTTCACCGCCTT...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR GCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACGAATTGGACATCCGGTaGCACCTCCAATTCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHELDIR*HLQFHT Trigger: TGTATGGAATTGGAGGTGGCACCGGATGTCCAATTC...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | CACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTATAAGGGATATGATGTTTaGATCACACCCATAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIIRGHARSANSKQTLQYKGYDV*ITPIAQ Trigger: CTGAGCTATGGGTGTGATCCAAACATCATATCCCTT...ATACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCTAAACAACCCTTCTTaGCAGCATCCAGCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHLNNPS*QHPAKL Trigger: CAGCTTTGCTGGATGCTGCCAAGAAGGGTTGTTTAG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACACAATTTCTTCACTCTaGCTAAACAACCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYTISSL*LNNPSW Trigger: CCAAGAAGGGTTGTTTAGCCAGAGTGAAGAAATTGT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAAGAGGCTGGATGGGCTaGACGGACCTGAAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTRGWMG*TDLKTE Trigger: CTCTGTCTTCAGGTCCGTCCAGCCCATCCAGCCTCT...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| 3UTR CAA 72 bp | TTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATaGTTTTCCTGCCAAGGAGTGAAACTTAAGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSFVPQACSQHE*FSCQGVKLKRP Trigger: CGGCCTCTTAAGTTTCACTCCTTGGCAGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCAAATGCAATGGAGTTaGCTTTCTGCCATCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHQMQWS*LSAITC Trigger: GCAAGTGATGGCAGAAAGTCAACTCCATTGCATTTG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTCATACTGGATGGTGTGGACGCCAAACACATCTTACCTTCATCATGAACTTCATGTAAAGGTGTaGACTTCCACAAGTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PKSYWMVWTPNTSYLHHELHVKV*TSTSQR Trigger: TCGCTGACTTGTGGAAGTTCACACCTTTACATGAAG...TTCATGATGAAGGTAAGATGTGTTTGGCGTCCACACCATCCAGTATGACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GTGATACAAGTAGACACTCAGATGGGCAGAACACTACACACACACACATACACAATGGAGTTGACTTTCTaGCATCACTTGCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIQVDTQMGRTLHTHTYTMELTF*HHLHGS Trigger: ACTGCCATGCAAGTGATGGCAGAAAGTCAACTCCAT...TGTGTATGTGTGTGTGTGTAGTGTTCTGCCCATCTGAGTGTCTACTTGTATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACTTTGGGATATGGAGATaGAGCAGCACAATGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNFGIWR*SSTMQC Trigger: GCACTGCATTGTGCTGCTGCATCTCCATATCCCAAA...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACAGCAGTTCACATATCTaGTTTCTTTTGGGATATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYSSSHI*FLLGYG Trigger: TCCATATCCCAAAAGAAAGCAGATATGTGAACTGCT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACTGTAAAGGTGTAGAATaGCGACCTTGGGTATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNCKGVE*RPWVSR Trigger: CCGTGATACCCAAGGTCGGCATTCTACACCTTTACA...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGGAATCCTCTTTTCTTTaGAAACCAGTAGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDKNLSLISECTAMQYGRESSFL*KPVAPS Trigger: AGAAGGTGCTACTGGTTTGCAAAGAAAAGAGGATTC...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGACATTTGCACCGTTCTaGAGAAGATATTCAACTACA | + |
|
Preference number: 4 (lower is better) Translates to: VDKNLSLISECTAMQYGRTFAPF*RRYSTT Trigger: TGTAGTTGAATATCTTCTTCAGAACGGTGCAAATGT...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAGTTGTAAAAGAAGATTaGCTACTTCAGCATGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQLDHIIRGHARSANSKQVVKED*LLQHDQ Trigger: TTGGTCATGCTGAAGTAGTCAATCTTCTTTTACAAC...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTGGTGTTTGTCCTTCTTaGTTTTTAAGAGTAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSGVCPS*FLRVGS Trigger: TGATCCTACTCTTAAAAATCAAGAAGGACAAACACC...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCAAACGTCACCAGCCTTTaGAGCTTCCAGCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSNVTSL*SFQQLS Trigger: AGACAGCTGCTGGAAGCTGCAAAGGCTGGTGACGTT...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | ATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTCTTGACAAGAAGTTCTaGAACTTCATAGTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ITSYVGMHAQQTASKHFSLDKKF*NFIVSI Trigger: TATGGACACTATGAAGTTGCAGAACTTCTTGTCAAG...ACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAAATATATCCATCAAGTaGTCAAGTCCAAGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLDHIIRGHARSANSKQNISIK*SSPRFL Trigger: AAGGAACCTTGGACTTGAGCACTTGATGGATATATT...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCCACCTATGTATGCATaGCTTTCATCAAAGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHPPMYA*LSSKPL Trigger: TAAGGGCTTTGATGAAAGGCATGCATACATAGGTGG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACCATGCCACCTATGTATaGATGCCTTTCATCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNHATYV*MPFIKA Trigger: GGCTTTGATGAAAGGCATGCATACATAGGTGGCATG...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | GTGATACAAGTAGACACTCAGATGGGCAGAACACTACACACACACACATACACATTCATTGCGCTGAACTaGAAGAAAGACTTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VIQVDTQMGRTLHTHTYTFIALN*KKDFPK Trigger: CTTGGGAAAGTCTTTCTTGCAGTTCAGCGCAATGAA...TGTGTATGTGTGTGTGTGTAGTGTTCTGCCCATCTGAGTGTCTACTTGTATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGCCGGGAGGAGAATGTaGCATTTTCATTGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFYHLCHRPVVSMNCFPAGRRM*HFHCAE Trigger: TTCAGCGCAATGAAAATGGCACATTCTCCTCCCGGC...AGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCTTTCTTTTGGGATATaGAGATGCAGCAGCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHLSFGI*RCSSTM Trigger: CATTGTGCTGCTGCATCTCCATATCCCAAAAGAAAG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | CACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAACACTTCAGTATATCCTTTCGTTTGCATaGTTGTGGTTTTCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HIIRGHARSANSKQTLQYILSFA*LWFSSE Trigger: TTCTGAAGAAAACCACAACCATGCAAACGAAAGGAT...ATACTGAAGTGTTTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| 3UTR CAA 72 bp | AAGTCACAACGCTGGGCTTCGTTCACATTTTATCATTaGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSQRWASFTFYH*CHRPVVSMNCF Trigger: AAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAACGAAGCCCAGCGTTGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | CATCATGAAGCATCTGAGCAAGTATGGCCACCACATTCTACATCTTACATTTATGCTTCTCGTGCAGCTTaGAGCAATGAATGGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HHEASEQVWPPHSTSYIYASRAA*SNEWPL Trigger: TAAAGGCCATTCATTGCTGCAAGCTGCACGAGAAGC...ATAAATGTAAGATGTAGAATGTGGTGGCCATACTTGCTCAGATGCTTCATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTGTATTTCGGATaGTTGGCTCAGCTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSHLYFG*LAQLHA Trigger: AGCATGGAGCTGAGCCAACCATCCGAAATACAGATG...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACGCTTGCAGCAATGAATaGCCTTTAAATTCATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPGMASVKVLRTGNTQKHACSNE*PLNSYD Trigger: ATCGTATGAATTTAAAGGCCATTCATTGCTGCAAGC...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTGTAGAATGCCGACCTTaGGTATCACGGCAATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: FTFYHLCHRPVVSMNCFPVECRP*VSRQFT Trigger: TGTAAATTGCCGTGATACCCAAGGTCGGCATTCTAC...AGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCAAAAGAGCATGCGTTATaGAGAGGAATAAGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSKEHAL*RGIRPP Trigger: TGGGGGTCTTATTCCTCTTCATAACGCATGCTCTTT...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACTACTGCTCCATGCTTaGCAAGAAGTTCTGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSLLLHA*QEVLQL Trigger: AAGTTGCAGAACTTCTTGTCAAGCATGGAGCAGTAG...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAGTGTCTGAGGATGTTTaGAATTCACCATTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTVSEDV*NSPFPE Trigger: CTCTGGAAATGGTGAATTTCAAACATCCTCAGACAC...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAATTTGTCCGTGGCATTaGCACACGCATTGTACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTICPWH*HTHCTL Trigger: TAAAGTACAATGCGTGTGTCAATGCCACGGACAAAT...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCATTGACTACTGCTCCATaGTTGACAAGAAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSLTTAP*LTRSSA Trigger: TGCAGAACTTCTTGTCAAGCATGGAGCAGTAGTCAA...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR TCA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCATGCAGCTTGCAGCAATaGATGGCCTTTAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: YKSISRSGFDLLTLDHNSCSLQQ*MAFKFI Trigger: TATGAATTTAAAGGCCATTCATTGCTGCAAGCTGCA...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR GCA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACACAAAGCATTAACCTTTaGTTCATGTTTCACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTQSINL*FMFHHY Trigger: GTAGTGGTGAAACATGAAGCAAAGGTTAATGCTTTG...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS GCA 90 bp | CCTTCCGTCCAAAACCTGCGGCGAAGTGGAGCGGGGTGGACTTCCTaGCCGCCGTGTCGCGGCTGTTCACCTTCTCGGGCGTCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVQNLRRSGAGWTS*PPCRGCSPSRASPA Trigger: GGCTGGTGACGCCCGAGAAGGTGAACAGCCGCGACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTGGACGGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS CCA 90 bp | CAACTACATCCTTCCGTCCAAAACCTGCGGCGAAGTGGAGCGGGGTaGACTTCCTGCCCGCCGTGTCGCGGCTGTTCACCTTCTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLHPSVQNLRRSGAG*TSCPPCRGCSPSRA Trigger: CGCCCGAGAAGGTGAACAGCCGCGACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTGGACGGAAGGATGTAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS CCA 90 bp | CTGCGGACAGTTCCGAGAAGCTGCCAGATAAGTTGTCGAGGCTGCTaGCTGCAGAGAGGCTGGATGGGCTGGACGGACCTGAAGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRTVPRSCQISCRGC*LQRGWMGWTDLKTE Trigger: CTCTGTCTTCAGGTCCGTCCAGCCCATCCAGCCTCTCTGCAGCCAGCAGCCTCGACAACTTATCTGGCAGCTTCTCGGAACTGTCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
||
| CDS-3UTR CAA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGGGCGTCACCAGCCTCTaGACTCGCTCCACGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VDKNLSLISECTAMQYGRGVTSL*TRSTSP Trigger: CGGGGACGTGGAGCGAGTCAAGAGGCTGGTGACGCC...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS GCA 90 bp | TACACTGGGCCGGCCAGTGACCGAGTGATGGCCGGGAGGAGAATGTaGCATTTTCATTGCGCTGAACTGCAAGAAAGACTTTCCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YTGPASDRVMAGRRM*HFHCAELQERLSQG Trigger: ACCTTGGGAAAGTCTTTCTTGCAGTTCAGCGCAATGAAAATGGCACATTCTCCTCCCGGCCATCACTCGGTCACTGGCCGGCCCAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGACCACAGACACTCTGTaGTACCCAGCTGCAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALRSRTSETSLEQDPELKTTDTL*YPAAKW Trigger: CCACTTTGCAGCTGGGTACAACAGAGTGTCTGTGGT...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCCAGAGCTTAAGGGTGTGAAAGCCCATTaGTCCGTGGCATTGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: ALRSRTSETSLEQDPELKGVKAH*SVALTH Trigger: GTGTGTCAATGCCACGGACAAATGGGCTTTCACACC...CTTAAGCTCTGGGTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | CCATGCAGTACGGCAGGTCTCTGTGCAATGCAAGATGCTAAGTGTAAGGCTTACACTGCCACAGGTCCATaGCATTCACACAGGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: PCSTAGLCAMQDAKCKAYTATGP*HSHRHR Trigger: ACGGTGCCTGTGTGAATGCAATGGACCTGTGGCAGT...GTAAGCCTTACACTTAGCATCTTGCATTGCACAGAGACCTGCCGTACTGCATGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGCACGCCACTGAGCACTaGAGGTTTGTAGCACGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDKNLSLISECTAMQYGRHATEH*RFVARR Trigger: CCTACGTGCTACAAACCTCAAGTGCTCAGTGGCGTG...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACATCTGTCTTTGTGAATaGGACATCCGGTGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: EESSALRSRTSETSLEQDICLCE*DIRCHL Trigger: GAGGTGGCACCGGATGTCCAATTCACAAAGACAGAT...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS GCA 90 bp | CTTAGAAGCTGCCTCATGAAGAGGAGTGAACTGCCACAGGTCCATTaGATTCACACAGGCACCGTGCTTGACCAGAAGTTCAGTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSCLMKRSELPQVH*IHTGTVLDQKFSYF Trigger: GAAGTAACTGAACTTCTGGTCAAGCACGGTGCCTGTGTGAATGCAATGGACCTGTGGCAGTTCACTCCTCTTCATGAGGCAGCTTCTAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS CCA 90 bp | AGCAGATATTCTACCACAGACACTCTGTTGTACCCAGCTGCAAAGTaGAGTGGGGTTGACTGGCGTCCTTCAATGTCTCTGCAGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRYSTTDTLLYPAAK*SGVDWRPSMSLQLT Trigger: TGTCAACTGCAGAGACATTGAAGGACGCCAGTCAACCCCACTCCACTTTGCAGCTGGGTACAACAGAGTGTCTGTGGTAGAATATCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000167724.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACACGCTCCACGTCCCCGTaGCGGCAAGCCTCGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTRSTSP*RQASNS Trigger: GCTGTTCGAGGCTTGCCGCAACGGGGACGTGGAGCG...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS CCA 90 bp | AAGGTTAATCTTTGCCCCAGAACGTCACGGAAGCTCTTACTACCTTaGAGCAGCTGCTGCACATTTTCATTTCCCATTTGCAAGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVNLCPRTSRKLLLP*SSCCTFSFPICKAV Trigger: CACCGCCTTGCAAATGGGAAATGAAAATGTGCAGCAGCTGCTCCAAGGTAGTAAGAGCTTCCGTGACGTTCTGGGGCAAAGATTAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168718.2 |
||
| CDS-3UTR CAA 90 bp | GAACCTGGAATGGCATCTGTTAAAGTGCTGAGAACAGGAAACACTCAGAAACACCCCATCATCACGCGCTaGCACATTTGCACCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPGMASVKVLRTGNTQKHPIITR*HICTVL Trigger: CAGAACGGTGCAAATGTGCAAGCGCGTGATGATGGG...GTGTTTCTGAGTGTTTCCTGTTCTCAGCACTTTAACAGATGCCATTCCAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGCTGTATTTCGGATGGTaGGCTCAGCTCCATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VDKNLSLISECTAMQYGRLYFGW*AQLHAV Trigger: TACAGCATGGAGCTGAGCCAACCATCCGAAATACAG...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAGGAATGAGTCCTCCTTaGTCCTGGGCATTCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: KQLDHIIRGHARSANSKQGMSPP*SWAFTS Trigger: TGATGTGAATGCCCAGGACAAAGGAGGACTCATTCC...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACCATTTGTCCGTGGCATaGACACACGCATTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: EESSALRSRTSETSLEQDHLSVA*THALYF Trigger: AAAGTACAATGCGTGTGTCAATGCCACGGACAAATG...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAATGTAGAATGCCGACCTaGGGTATCACGGCAATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KQLDHIIRGHARSANSKQCRMPT*GITAIY Trigger: GTAAATTGCCGTGATACCCAAGGTCGGCATTCTACA...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GTGGATAAAAATCTCTCCTTGATTTCTGAGTGTACCGCCATGCAGTACGGCAGGCCAAATGCAATGGAGTaGACTTTCTGCCATCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDKNLSLISECTAMQYGRPNAME*TFCHHL Trigger: CAAGTGATGGCAGAAAGTCAACTCCATTGCATTTGG...CCTGCCGTACTGCATGGCGGTACACTCAGAAATCAAGGAGAGATTTTTATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | AAACAACTGGATCACATCATACGTGGGCATGCACGCTCAGCAAACAGCAAGCAAATTTTCATTTCCCATTaGCAAGGCGGTGAAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQLDHIIRGHARSANSKQIFISH*QGGETL Trigger: CAGGGTTTCACCGCCTTGCAAATGGGAAATGAAAAT...TTGCTTGCTGTTTGCTGAGCGTGCATGCCCACGTATGATGTGATCCAGTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACATCTTAGGAACAACCAAAGTGGAGTGGGGTaGACTGGCGTCCTTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSGFDLLTLDHNSHLRNNQSGVG*TGVLQC Trigger: ACATTGAAGGACGCCAGTCAACCCCACTCCACTTTG...GTTGTTCCTAAGATGTGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAGTTCTGCTCTGAGGTCGAGGACATCAGAGACCTCTCTAGAGCAAGACGTTCCACTACCAGAGTaGTTTAGAGTTAAATATGGA | + |
|
Preference number: 5 (lower is better) Translates to: EESSALRSRTSETSLEQDVPLPE*FRVKYG Trigger: TCCATATTTAACTCTAAACAACTCTGGTAGTGGAAC...GTCTTGCTCTAGAGAGGTCTCTGATGTCCTCGACCTCAGAGCAGAACTCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
||
| CDS CCA 90 bp | ATGGGTCTGCTAAATCCAATGCTGTCCTTCCATCTGTATTTCGGATaGTTGGCTCAGCTCCATGCTGTAAAAGCACAATGCAAACATCAA | + |
|
Preference number: 5 (lower is better) Translates to: MGLLNPMLSFHLYFG*LAQLHAVKAQCKHQ Trigger: TTGATGTTTGCATTGTGCTTTTACAGCATGGAGCTGAGCCAACCATCCGAAATACAGATGGAAGGACAGCATTGGATTTAGCAGACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | CCAAAGTCATACTGGATGGTGTGGACGCCAAACACATCTTACCTTCATCATGAAAACATCAGCTCCATGTaGCAGCAGATATTCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: PKSYWMVWTPNTSYLHHENISSM*QQIFYH Trigger: GTGGTAGAATATCTGCTGCAACATGGAGCTGATGTT...TTCATGATGAAGGTAAGATGTGTTTGGCGTCCACACCATCCAGTATGACTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAAAGCTGCCAGATAAGTaGTCGAGGCTGCTGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTKLPDK*SRLLAA Trigger: TGCAGCCAGCAGCCTCGACAACTTATCTGGCAGCTT...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | TTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTCACAAGTCAGCGACATaGACTACTGCTCCATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FTFYHLCHRPVVSMNCFPHKSAT*TTAPCL Trigger: CAAGCATGGAGCAGTAGTCAATGTCGCTGACTTGTG...AGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 90 bp | AATTATCCCGAGCATTTGGGTCTGCACCGTGTTGTAAAAGAAGATTaGCTACTTCAGCATGACCAAAAGAGCATGCGTTATGAAGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: NYPEHLGLHRVVKED*LLQHDQKSMRYEEE Trigger: TTCCTCTTCATAACGCATGCTCTTTTGGTCATGCTGAAGTAGTCAATCTTCTTTTACAACACGGTGCAGACCCAAATGCTCGGGATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | CCATCACTCTCTTCTTATGGAACACTGAAGACTAATTACAGACATGTCATTAGCAATTATCCCGAGCATTaGGGTCTGCACCGTGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: PSLSSYGTLKTNYRHVISNYPEH*GLHRVV Trigger: TACAACACGGTGCAGACCCAAATGCTCGGGATAATT...GCTAATGACATGTCTGTAATTAGTCTTCAGTGTTCCATAAGAAGAGAGTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 90 bp | TTAACCTTTGCTTCATGTTTCACCACTACTTCAACAACATCATTGTaGGCGTTCTCAGAAGCCACGTGCAGAGGAGTCAAGAATTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LTFASCFTTTSTTSL*AFSEATCRGVKNSL Trigger: TAAAGAATTCTTGACTCCTCTGCACGTGGCTTCTGAGAACGCTCACAATGATGTTGTTGAAGTAGTGGTGAAACATGAAGCAAAGGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000168718.2 |
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| CDS-3UTR CAA 90 bp | TTCACATTTTATCATTTGTGCCACAGGCCTGTAGTCAGCATGAATTGTTTTCCTATCTCTTTCAGTTCCTaGTGGCCCATTTCAACTAGG | + |
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Preference number: 5 (lower is better) Translates to: FTFYHLCHRPVVSMNCFPISFSS*WPISTR Trigger: CCTAGTTGAAATGGGCCACAAGGAACTGAAAGAGAT...AGGAAAACAATTCATGCTGACTACAGGCCTGTGGCACAAATGATAAAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCAACTACTGCTCCATGCTaGACAAGAAGTTCTGCAACT | + |
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Preference number: 5 (lower is better) Translates to: YKSISRSGFDLLTLDHNSTTAPC*TRSSAT Trigger: AGTTGCAGAACTTCTTGTCAAGCATGGAGCAGTAGT...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAGCATTGACACACGCATaGTACTTTATCAGCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTALTHA*YFISKA Trigger: AGCTTTGCTGATAAAGTACAATGCGTGTGTCAATGC...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | ATTCTACATCTTACATTTATGCTGCACCCTGTCACGATTAGACTCAAAACTACAACAATTTTTACTCTGTaGTATCCTGCTGCCAAATGC | + |
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Preference number: 5 (lower is better) Translates to: ILHLTFMLHPVTIRLKTTTIFTL*YPAAKC Trigger: GCATTTGGCAGCAGGATACAACAGAGTAAAAATTGT...TGTAGTTTTGAGTCTAATCGTGACAGGGTGCAGCATAAATGTAAGATGTAGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCACTTTCGTTTGCATGGTaGTGGTTTTCTTCAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: YKSISRSGFDLLTLDHNSLSFAW*WFSSET Trigger: AGTTTCTGAAGAAAACCACAACCATGCAAACGAAAG...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS-3UTR CAA 90 bp | TATAAAAGCATTTCTAGGTCAGGATTTGACCTCTTAACCCTTGACCACAATTCAATAACATCCTTTCGTTaGCATGGTTGTGGTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: YKSISRSGFDLLTLDHNSITSFR*HGCGFL Trigger: AAGAAAACCACAACCATGCAAACGAAAGGATGTTAT...TGAATTGTGGTCAAGGGTTAAGAGGTCAAATCCTGACCTAGAAATGCTTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 90 bp | CTTCTTCCACAGACTGAAATTCTTTATCATCAGGAGACAGATCTATaGGAATTGTTCCACTACCAGAGTTGTTTAGAGTTAAATATGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLPQTEILYHQETDL*ELFHYQSCLELNMD Trigger: ATCCATATTTAACTCTAAACAACTCTGGTAGTGGAACAATTCTCATAGATCTGTCTCCTGATGATAAAGAATTTCAGTCTGTGGAAGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS GCA 72 bp | CAAAACCTGCGGCGAAGTGGAGCGGGGTGGACTTCCTaGCCGCCGTGTCGCGGCTGTTCACCTTCTCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QNLRRSGAGWTS*PPCRGCSPSRA Trigger: CGCCCGAGAAGGTGAACAGCCGCGACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CCA 72 bp | CCTTCCGTCCAAAACCTGCGGCGAAGTGGAGCGGGGTaGACTTCCTGCCCGCCGTGTCGCGGCTGTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: PSVQNLRRSGAG*TSCPPCRGCSP Trigger: AGGTGAACAGCCGCGACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTGGACGGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CCA 72 bp | TCAACTACATCCTTCCGTCCAAAACCTGCGGCGAAGTaGAGCGGGGTGGACTTCCTGCCCGCCGTGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: STTSFRPKPAAK*SGVDFLPAVSR Trigger: CCGCGACACGGCGGGCAGGAAGTCCACCCCGCTCCACTTCGCCGCAGGTTTTGGACGGAAGGATGTAGTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 72 bp | CAGCTAATGCTAGGCCATTTACACTGGGCCGGCCAGTaGCCGAGTGATGGCCGGGAGGAGAATGTGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: QLMLGHLHWAGQ*PSDGREENVPF Trigger: AAATGGCACATTCTCCTCCCGGCCATCACTCGGTCACTGGCCGGCCCAGTGTAAATGGCCTAGCATTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS GCA 72 bp | CCGGCCAGTGACCGAGTGATGGCCGGGAGGAGAATGTaGCATTTTCATTGCGCTGAACTGCAAGAAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: PASDRVMAGRRM*HFHCAELQERL Trigger: AAGTCTTTCTTGCAGTTCAGCGCAATGAAAATGGCACATTCTCCTCCCGGCCATCACTCGGTCACTGGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 72 bp | TTTTCTTTGCAAACCAGTAGCACCTTCTGCTGCACTTaGACTAACCACTGCGGACAGTTCCGAGAAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FSLQTSSTFCCT*TNHCGQFREAA Trigger: GGCAGCTTCTCGGAACTGTCCGCAGTGGTTAGTTCAAGTGCAGCAGAAGGTGCTACTGGTTTGCAAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
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| CDS GCA 72 bp | AGAACGTCACGGAAGCTCTTACTACCTTGGAGCAGCTaGTGCACATTTTCATTTCCCATTTGCAAGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTSRKLLLPWSS*CTFSFPICKAV Trigger: CACCGCCTTGCAAATGGGAAATGAAAATGTGCAGCAGCTGCTCCAAGGTAGTAAGAGCTTCCGTGACGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168718.2 |
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| CDS CAA 90 bp | GCTCTTACTACCTTGGAGCAGCTGCTGCACATTTTCATTTCCCATTaGCAAGGCGGTGAAACCCTGAAGGGATATGATGTTTGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: ALTTLEQLLHIFISH*QGGETLKGYDVWIT Trigger: TGTGATCCAAACATCATATCCCTTCAGGGTTTCACCGCCTTGCAAATGGGAAATGAAAATGTGCAGCAGCTGCTCCAAGGTAGTAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168718.2 |
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| CDS TCA 72 bp | GCTTCATGTTTCACCACTACTTCAACAACATCATTGTaGGCGTTCTCAGAAGCCACGTGCAGAGGAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: ASCFTTTSTTSL*AFSEATCRGVK Trigger: CTTGACTCCTCTGCACGTGGCTTCTGAGAACGCTCACAATGATGTTGTTGAAGTAGTGGTGAAACATGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000168718.2 |
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| CDS CCA 72 bp | CTAAATCCAATGCTGTCCTTCCATCTGTATTTCGGATaGTTGGCTCAGCTCCATGCTGTAAAAGCACAATGC | + |
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Preference number: 6 (lower is better) Translates to: LNPMLSFHLYFG*LAQLHAVKAQC Trigger: GCATTGTGCTTTTACAGCATGGAGCTGAGCCAACCATCCGAAATACAGATGGAAGGACAGCATTGGATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CCA 72 bp | CCAGCTGCCAAATGTAAAGGTGTAGAATGCCGACCTTaGGTATCACGGCAATTTACATTATCAGGAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: PAAKCKGVECRP*VSRQFTLSGED Trigger: GTCTTCTCCTGATAATGTAAATTGCCGTGATACCCAAGGTCGGCATTCTACACCTTTACATTTGGCAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
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| CDS CAA 72 bp | TCATGTAACGGTGTGAAAGCCCATTTGTCCGTGGCATaGACACACGCATTGTACTTTATCAGCAAAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SCNGVKAHLSVA*THALYFISKAA Trigger: AGCAGCTTTGCTGATAAAGTACAATGCGTGTGTCAATGCCACGGACAAATGGGCTTTCACACCGTTACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CCA 72 bp | GTTCATCTTTCTTATAGTCACCAGTCAGAACAGCTTTaGCAGATGGGTCTGCTAAATCCAATGCTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VHLSYSHQSEQL*QMGLLNPMLSF Trigger: GAAGGACAGCATTGGATTTAGCAGACCCATCTGCCAAAGCTGTTCTGACTGGTGACTATAAGAAAGATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CAA 72 bp | TCATGTAAAGGTGTGAACTTCCACAAGTCAGCGACATaGACTACTGCTCCATGCTTGACAAGAAGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SCKGVNFHKSAT*TTAPCLTRSSA Trigger: TGCAGAACTTCTTGTCAAGCATGGAGCAGTAGTCAATGTCGCTGACTTGTGGAAGTTCACACCTTTACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
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| CDS CAA 90 bp | GGTCTGCTAAATCCAATGCTGTCCTTCCATCTGTATTTCGGATGGTaGGCTCAGCTCCATGCTGTAAAAGCACAATGCAAACATCAATTT | + |
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Preference number: 6 (lower is better) Translates to: GLLNPMLSFHLYFGW*AQLHAVKAQCKHQF Trigger: AAATTGATGTTTGCATTGTGCTTTTACAGCATGGAGCTGAGCCAACCATCCGAAATACAGATGGAAGGACAGCATTGGATTTAGCAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CAA 90 bp | ACATCAGCCCCATGGTGCAGTAACAGTTGTACAATTTTTACTCTGTaGTATCCTGCTGCCAAATGCAATGGAGTTGACTTTCTGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: TSAPWCSNSCTIFTL*YPAAKCNGVDFLPS Trigger: TGATGGCAGAAAGTCAACTCCATTGCATTTGGCAGCAGGATACAACAGAGTAAAAATTGTACAACTGTTACTGCACCATGGGGCTGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS TCA 72 bp | GAGCATTTGGGTCTGCACCGTGTTGTAAAAGAAGATTaGCTACTTCAGCATGACCAAAAGAGCATGCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: EHLGLHRVVKED*LLQHDQKSMRY Trigger: ATAACGCATGCTCTTTTGGTCATGCTGAAGTAGTCAATCTTCTTTTACAACACGGTGCAGACCCAAATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS GCA 72 bp | CTTCCATCTGTATTTCGGATGGTTGGCTCAGCTCCATaGTGTAAAAGCACAATGCAAACATCAATTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPSVFRMVGSAP*CKSTMQTSIFP Trigger: AGGAAAAATTGATGTTTGCATTGTGCTTTTACAGCATGGAGCTGAGCCAACCATCCGAAATACAGATGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS GCA 72 bp | AAAATAAATTCCAGCTCCAAACATGCCACCTATGTATaGATGCCTTTCATCAAAGCCCTTATGGATAATCGC | + |
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Preference number: 6 (lower is better) Translates to: KINSSSKHATYV*MPFIKALMDNR Trigger: GCGATTATCCATAAGGGCTTTGATGAAAGGCATGCATACATAGGTGGCATGTTTGGAGCTGGAATTTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS CAA 72 bp | CCATGGTGCAGTAACAGTTGTACAATTTTTACTCTGTaGTATCCTGCTGCCAAATGCAATGGAGTTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: PWCSNSCTIFTL*YPAAKCNGVDF Trigger: AAAGTCAACTCCATTGCATTTGGCAGCAGGATACAACAGAGTAAAAATTGTACAACTGTTACTGCACCATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025729.12 |
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| CDS GCA 72 bp | GTTATACTAAAATCGATTCCTGAATCCTCTTTTCTTTaGAAACCAGTAGCACCTTCTGCTGCACTTGAACTA | + |
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Preference number: 6 (lower is better) Translates to: VILKSIPESSFL*KPVAPSAALEL Trigger: TAGTTCAAGTGCAGCAGAAGGTGCTACTGGTTTGCAAAGAAAAGAGGATTCAGGAATCGATTTTAGTATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
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| CDS TCA 72 bp | TCCATCAAGTGCTCAAGTCCAAGGTTCCTTATGAACTaGGTTATACTAAAATCGATTCCTGAATCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SIKCSSPRFLMN*VILKSIPESSF Trigger: AAAAGAGGATTCAGGAATCGATTTTAGTATAACTCAGTTCATAAGGAACCTTGGACTTGAGCACTTGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025729.12 ENSMUST00000164665.2 |
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