RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022791

Ensembl transcript IDs: ENSMUST00000115120.9, ENSMUST00000115121.9, ENSMUST00000115122.9, ENSMUST00000115123.9, ENSMUST00000115124.9, ENSMUST00000115125.8, ENSMUST00000115126.9, ENSMUST00000124585.2, ENSMUST00000131238.8, ENSMUST00000137044.3, ENSMUST00000145627.8, ENSMUST00000150383.8, ENSMUST00000152361.4, ENSMUST00000156614.3, ENSMUST00000238799.2, ENSMUST00000238806.2, ENSMUST00000238815.2, ENSMUST00000238856.2, ENSMUST00000238891.2

Found 1031 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGCCTGCAGCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGAGCCGTGGCC +
Preference number: 1 (lower is better)
Translates to: MACSIWTLSAGRAAS*PSPGQPLCGSRAVA
Trigger: GGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR GCA 90 bp GCAGCCGAGCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGTTGGCCTTTGGGTCTGGGGCGGCCT +
Preference number: 1 (lower is better)
Translates to: AAEPWPSGMVAVPLG*CYWWRSWPLGLGRP
Trigger: AGGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR TCA 90 bp TCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCACCCTTGTCCCACAGACAGGTTCAA +
Preference number: 1 (lower is better)
Translates to: SLSPGSRRQLWVLRA*GRAAPPPLSHRQVQ
Trigger: TTGAACCTGTCTGTGGGACAAGGGTGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CCA 90 bp CTGTGGCAGCCGAGCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTaGGTTGCTGTTATTGGTGGAGAAGTTGGCCTTTGGGTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: LWQPSRGPQGWWPCP*VAVIGGEVGLWVWG
Trigger: GCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR GCA 90 bp AGCCAGAGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTaGCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGG +
Preference number: 1 (lower is better)
Translates to: SQRQATQSLPGSFLS*LHKAGNVPPLGALR
Trigger: CCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR GCA 90 bp GCTGACCTTCCTGCCATCGCGGACAATGGGCAGGATGCAGGGGCCTaGCCGTGGGCCAGGAGCCTGGATCACTTGTGGAGTGGCATACTT +
Preference number: 1 (lower is better)
Translates to: ADLPAIADNGQDAGA*PWARSLDHLWSGIL
Trigger: AAGTATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCAGGAAGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp CTTCCTGCCATCGCGGACAATGGGCAGGATGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCACTTGTGGAGTGGCATACTTAGGGTC +
Preference number: 1 (lower is better)
Translates to: LPAIADNGQDAGACP*ARSLDHLWSGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp TGGCCGTGCCCCTGGGTTGCTGTTATTGGTGGAGAAGTTGGCCTTTaGGTCTGGGGCGGCCTGAGGCATAGGTCTGACGGTGGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: WPCPWVAVIGGEVGL*VWGGLRHRSDGGSG
Trigger: CCCACTGCCACCGTCAGACCTATGCCTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp GAACACTCCAGCTGTGGCTCTGCAGGGCCGCCTGGCACTCCTCTGTaGTCACCCCATGCACCATGGCCTGCAGCATCTGGACCTTGTCTG +
Preference number: 1 (lower is better)
Translates to: EHSSCGSAGPPGTPL*SPHAPWPAASGPCL
Trigger: CAGACAAGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR TCA 90 bp CCAGGTAAGGAGGGCGCTCAGGCAGCAGGTAGTAATGAGTGCTGCTaGCCTTCCTGCCATCGCGGACAATGGGCAGGATGCAGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PGKEGAQAAGSNECC*PSCHRGQWAGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCAGGAAGGTCAGCAGCACTCATTACTACCTGCTGCCTGAGCGCCCTCCTTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp AGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTaGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: SNRGGTGQTGKYWCH*GLLPHPGPWALVPA
Trigger: GGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 90 bp CAAATGTGGGTCTGTCCTCTGGCTTGTGGGCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAGGGCAGTCCTCCGGCCGGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: QMWVCPLACGPSTGP*HCRCLEGSPPAGAG
Trigger: GCCTGCCCCGGCCGGAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR GCA 90 bp AAGGGGCCTAGCCCTGAGGAGGGCCTGTTGGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCCTTCTTGTCCATGTCAAGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: KGPSPEEGLLVAGSP*CVANTSFLSMSSLA
Trigger: AGCCAGGCTTGACATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCCCTCCTCAGGGCTAGGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CCA 90 bp CGGACAATGGGCAGGATGCAGGGGCCTGCCCGTGGGCCAGGAGCCTaGATCACTTGTGGAGTGGCATACTTAGGGTCTGAGGCAAAGCTT +
Preference number: 1 (lower is better)
Translates to: RTMGRMQGPARGPGA*ITCGVAYLGSEAKL
Trigger: AAGCTTTGCCTCAGACCCTAAGTATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp CAGCCGGCTTGCTCTAGGTTCCAGTCGAACATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGAAGACCCAGCCCAAAGAGCTGCTCC +
Preference number: 1 (lower is better)
Translates to: QPACSRFQSNISRTL*HSTRGRRPSPKSCS
Trigger: GGAGCAGCTCTTTGGGCTGGGTCTTCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGATGTTCGACTGGAACCTAGAGCAAGCCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp CTAGCCCTGAGGAGGGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTaGCCAACACATCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTC +
Preference number: 1 (lower is better)
Translates to: LALRRACWLLARPAV*PTHPSCPCQAWLPV
Trigger: GACAGGAAGCCAGGCTTGACATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCCCTCCTCAGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 90 bp GGGAACCCCCAGCAGTGGCGGGGGTCACTGTCACCATGTCCTGTGTaGATGAAGCTATTCTGTAGAGGCTGGCTGATGTCCTGGGCTGAC +
Preference number: 1 (lower is better)
Translates to: GNPQQWRGSLSPCPV*MKLFCRGWLMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAGCTTCATTCACACAGGACATGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000238799.2
3UTR CCA 90 bp CGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACA +
Preference number: 1 (lower is better)
Translates to: RPAVWPTHPSCPCQA*LPVSLIPQRKAWGT
Trigger: TGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CCA 90 bp CTCCAGCAGGAAGTCCCGAAGAGCCACAAATGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTTG +
Preference number: 1 (lower is better)
Translates to: LQQEVPKSHKCGSVL*LVGPALDHDIVDVL
Trigger: CAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACATTTGTGGCTCTTCGGGACTTCCTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR TCA 90 bp TGGATCACTTGTGGAGTGGCATACTTAGGGTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTTCCAGGTGAGCTAGAGAGCCGATGC +
Preference number: 1 (lower is better)
Translates to: WITCGVAYLGSEAKL*VVGMVFPGELESRC
Trigger: GCATCGGCTCTCTAGCTCACCTGGAAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGACCCTAAGTATGCCACTCCACAAGTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 90 bp CTCGATGACAGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGC +
Preference number: 1 (lower is better)
Translates to: LDDSDDVIHLDVQFI*LLKVLKSPHVSGLS
Trigger: GCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR TCA 90 bp TATAGGTACAAGTTCCTAAGACCAGCCAAGCCCACAAGTTCACAGTaGAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACAG +
Preference number: 1 (lower is better)
Translates to: YRYKFLRPAKPTSSQ*SYRSHSVQHSTLLQ
Trigger: CTGTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTCTTAGGAACTTGTACCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCTGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSWVLRA*GRAAPP
Trigger: TGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCA...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCCACCAGCCCAGCCTTaGTCTGGAGCCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSPPAQP*SGARGR
Trigger: CCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCAGCCTCCTGCTGCCTaGGTCTCACTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSQPPAA*VSLSPG
Trigger: CCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CAA 90 bp GGCAGCCGAGCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAGTTGGCCTTTGGGTCTGGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: GSRAVALRDGGRAPG*LLLVEKLAFGSGAA
Trigger: GGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR TCA 90 bp CTCTGCAGGGCCGCCTGGCACTCCTCTGTGGTCACCCCATGCACCATGGCCTGCCCACCAGCCCAGCCTTaGTCTGGAGCCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LCRAAWHSSVVTPCTMACPPAQP*SGARGR
Trigger: CCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGG...GCAGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCCCACATCCGGGGCCTTaGGCCCTGGTCCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: LGHTLATSPALIWSQRQAPHPGP*ALVPAR
Trigger: TCTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGG...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACAGCCTCCTGCTGCCTaGGTCTCACTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAQPPAA*VSLSPG
Trigger: CCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSWVLRA*GRAAPP
Trigger: TGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: LGHTLATSPALIWSQRQAVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCGGGGCCTTGGGCCCTaGTCCCTGCCAGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: TLATSPALIWSQRQATQSRGLGP*SLPEKI
Trigger: GATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: KQESTGATGVSFHIRGLGWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CAA 90 bp GAGCCAGAGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTaGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: EPEAGHTEPARQLPV*PSQGWERPTSWGTE
Trigger: CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCTCTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 90 bp CTACAGGGGTTCCCTGGGAAGGGGCCTAGCCCTGAGGAGGGCCTGTaGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: LQGFPGKGPSPEEGL*VAGSPCCVANTSFL
Trigger: CAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCCCTCCTCAGGGCTAGGCCCCTTCCCAGGGAACCCCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 90 bp CTCTGGCTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCGGGGCAGGCGCTCCCCTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: LWLVGPALDHDIVDV*RAVLRPGQALPFLV
Trigger: GACAAGGAAGGGGAGCGCCTGCCCCGGCCGGAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCCGGGGCCTTGGGCCCTaGTCCCTGCCAGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGRGLGP*SLPEKI
Trigger: GATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCG...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGCACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: TLATSPALIWSQRQATQSVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCAGAACAGCGCTGGGTaGGTGAGCGAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAQNSAG*VSEVGK
Trigger: CTTGCCCACCTCGCTCACCCACCCAGCGCTGTTCTG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCAGAACAGCGCTGGGTaGGTGAGCGAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSQNSAG*VSEVGK
Trigger: CTTGCCCACCTCGCTCACCCACCCAGCGCTGTTCTG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSCPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: TLATSPALIWSQRQATQSWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCCAGCAGGAGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: APQSPEEPACQWAEPPAGGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCAGCCTCCTGCTGCCTaGGTCTCACTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PVGCWLALLCGQHILLVHQPPAA*VSLSPG
Trigger: CCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCAGAACAGCGCTGGGTaGGTGAGCGAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALQNSAG*VSEVGK
Trigger: CTTGCCCACCTCGCTCACCCACCCAGCGCTGTTCTG...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TCATCGATCCTGTCAGGGAACCCCCAGCAGTGGCGGGGGTCACTGTCACCATGTTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: SSILSGNPQQWRGSLSPCCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...ACATGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCCTGACAGGATCGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR TCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: DQPSPQVHSEATGHILSNWVLRA*GRAAPP
Trigger: TGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAATGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEWVLRA*GRAAPP
Trigger: TGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCA...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: KQESTGATGVSFHIRGLGHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCCCACAAGTTCACAGTaGAGCTACAGGTCACATTCT +
Preference number: 2 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLPTSSQ*SYRSHS
Trigger: AGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CGAGCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTGGGTTGCTGTTATTGGTGTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 2 (lower is better)
Translates to: RAVALRDGGRAPGLLLLVSEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...CACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: SSLASCQSNPPEESLGHTRLPAS*CLGLTV
Trigger: GACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCT...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTTGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: SSLASCQSNPPEESLGHTCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLCPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp AGGGTCCTACACACAGGGTCCGCGTATTCTGCCCACGCCACCAGTAGTTCTCAGTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: RVLHTGSAYSAHATSSSQCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...CTGAGAACTACTGGTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCCACCAGCCCAGCCTTaGTCTGGAGCCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALPPAQP*SGARGR
Trigger: CCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGG...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: DQPSPQVHSEATGHILSNGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCAGCCTCCTGCTGCCTaGGTCTCACTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSMSSLASCQSNPPEESLQPPAA*VSLSPG
Trigger: CCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: LGHTLATSPALIWSQRQACPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCGGGGCCTTGGGCCCTaGTCCCTGCCAGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: SIAGATTLATEADGNTSDRGLGP*SLPEKI
Trigger: GATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACAAGTACTGGTGCCACTaGGGTCTCCTTCCACATCCG +
Preference number: 2 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHKYWCH*GLLPHP
Trigger: CGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTT...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: RLWQQRLMGTHQIATGEERGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR TCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTGGGTCCTTCGGGCCTaGGGCAGGGCAGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPWVLRA*GRAAPP
Trigger: TGGGGGAGCTGCCCTGCCTCAGGCCCGAAGGACCCA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACCACCAGCCCAGCCTTaGTCTGGAGCCAGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEPPAQP*SGARGR
Trigger: CCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGG...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp TTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: FIWLLKVLKSPHVSGLSLGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...GAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGCAGCCTCCTGCTGCCTaGGTCTCACTGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQQPPAA*VSLSPG
Trigger: CCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTG...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCAGAACAGCGCTGGGTaGGTGAGCGAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SIAGATTLATEADGNTSDQNSAG*VSEVGK
Trigger: CTTGCCCACCTCGCTCACCCACCCAGCGCTGTTCTG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGTGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QIATGEEQVKQESTGATGCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 90 bp CTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTaGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LLVAGSPCCVANTSF*SMSSLASCQSNPPE
Trigger: CTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: IAGATTLATEADGNTSDSVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: DQPSPQVHSEATGHILSNCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: LSMSSLASCQSNPPEESLWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCACCTTTTCTGTTTCTaGGCCACTTCAGGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: TLATSPALIWSQRQATQSHLFCF*ATSGCL
Trigger: TAAACAGCCTGAAGTGGCTCAGAAACAGAAAAGGTG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp GTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCATCAGCGTTAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: VQEVLLGQTTALQSTISVRLPAS*CLGLTV
Trigger: GACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCT...AACGCTGATGGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR GCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHRLPAS*CLGLTV
Trigger: GACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCT...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGCPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCGGGGCCTTGGGCCCTaGTCCCTGCCAGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPRGLGP*SLPEKI
Trigger: GATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACGGGGCCTTGGGCCCTaGTCCCTGCCAGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: ALFLWKKQISIAGATTLARGLGP*SLPEKI
Trigger: GATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACCACATCCGGGGCCTTaGGCCCTGGTCCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATTLATPHPGP*ALVPAR
Trigger: TCTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GTCACGACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCAACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 2 (lower is better)
Translates to: VTTFRGKGPTHRVRVFCPTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...TGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp GGGCTGACAGGCCAGCCACGGAGGTCACGACATTTCGAGGGAAGGGTCCTACACGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: GLTGQPRRSRHFEGRVLHDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...GTGTAGGACCCTTCCCTCGAAATGTCGTGACCTCCGTGGCTGGCCTGTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238799.2
3UTR-3UTR TCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: DQPSPQVHSEATGHILSNWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACCACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGCACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWHLLGH*GLNQGV
Trigger: CACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTG...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACCCACAAGTTCACAGTaGAGCTACAGGTCACATTCT +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPPTSSQ*SYRSHS
Trigger: AGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CACGGAGGTCACGACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 2 (lower is better)
Translates to: HGGHDISREGSYTQGPRIPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...AATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGACCTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR GCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: ALFLWKKQISIAGATTLARLPAS*CLGLTV
Trigger: GACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCT...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 2 (lower is better)
Translates to: LATEADGNTSDSNRGGTGQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PVGCWLALLCGQHILLVHQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR TCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACACCTTTTCTGTTTCTaGGCCACTTCAGGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPHLFCF*ATSGCL
Trigger: TAAACAGCCTGAAGTGGCTCAGAAACAGAAAAGGTG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp TTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 2 (lower is better)
Translates to: FIWLLKVLKSPHVSGLSLPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...GAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR GCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATTLATRLPAS*CLGLTV
Trigger: GACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCT...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGTTGCTGGCTCGCCCTaGTGTGTGGCCAACACATCC +
Preference number: 2 (lower is better)
Translates to: QVHSEATGHILSNTPHSYVAGSP*CVANTS
Trigger: GGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAAC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATGTGCAGAACAGCGCTaGGTGGGTGAGCGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATTLATCAEQR*VGERGG
Trigger: CCCACCTCGCTCACCCACCCAGCGCTGTTCTGCACA...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GGATGTGCAGTTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGCAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GCAVYLAPQSPEEPACQWQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...CCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAACTGCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp AGGGTCCTACACACAGGGTCCGCGTATTCTGCCCACGCCACCAGTAGTTCTCAGGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: RVLHTGSAYSAHATSSSQDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...CTGAGAACTACTGGTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR TCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: QVHSEATGHILSNTPHSYWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCATGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: ALFLWKKQISIAGATTLAWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR TCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTGGGGCACTGAGGGCTaGACCAAGGTGTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPWGTEG*TKVCRT
Trigger: TGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCAAGTACTGGTGCCACTaGGGTCTCCTTCCACATCCG +
Preference number: 2 (lower is better)
Translates to: THQIATGEEQVKQESTGAKYWCH*GLLPHP
Trigger: CGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GTTCTCAGCCCTTCCCTCGATGACAGTGATGACGTCATTCATCTGGATGTGCAGACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 2 (lower is better)
Translates to: VLSPSLDDSDDVIHLDVQTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...CTGCACATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAGGGCTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp TTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 2 (lower is better)
Translates to: FIWLLKVLKSPHVSGLSLILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...GAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALCPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAAAGTACTGGTGCCACTaGGGTCTCCTTCCACATCCG +
Preference number: 2 (lower is better)
Translates to: ALFLWKKQISIAGATTLAKYWCH*GLLPHP
Trigger: CGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTT...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CACGGAGGTCACGACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 2 (lower is better)
Translates to: HGGHDISREGSYTQGPRIMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...AATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGACCTCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCACCTTTTCTGTTTCTaGGCCACTTCAGGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALHLFCF*ATSGCL
Trigger: TAAACAGCCTGAAGTGGCTCAGAAACAGAAAAGGTG...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATTLATPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp CTTCCCTCGATGACAGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTGGCCAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LPSMTVMTSFIWMCSLSGQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...GCCAGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATTLATYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CAA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTaGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGA +
Preference number: 2 (lower is better)
Translates to: LFLWKKQISIAGATT*ATEADGNTSDSNRG
Trigger: TCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR GCA 90 bp CCAGTAGTTCTCAGCCCTTCCCTCGATGACAGTGATGACGTCATTCATCTGGATTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 2 (lower is better)
Translates to: PVVLSPSLDDSDDVIHLDSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...ATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAGGGCTGAGAACTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTTTAGGGCAGACCACTaGTCTCCAGTCAACCATCAG +
Preference number: 2 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPFRADH*SPVNHQ
Trigger: CTGATGGTTGACTGGAGAGCAGTGGTCTGCCCTAAA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATC +
Preference number: 2 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWCPCQA*LPVSLI
Trigger: GATTAGACTGACAGGAAGCCAGGCTTGACATGGACA...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGCAAGCTTTATTTCTCTaGAAGAAGCAGATATCCATA +
Preference number: 2 (lower is better)
Translates to: QIATGEEQVKQESTGATGQALFL*KKQISI
Trigger: TATGGATATCTGCTTCTTCCAGAGAAATAAAGCTTG...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCATCCACATCCGGGGCCTaGGGCCCTGGTCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEASTSGA*GPGPCQ
Trigger: CTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGA...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR GCA 72 bp GTGAGCGAGGTGGGCAAGGTGAGGCTCCCAGCCTCCTaGTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAG +
Preference number: 3 (lower is better)
Translates to: VSEVGKVRLPAS*CLGLTVPWEPQ
Trigger: CTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGGAGGCTGGGAGCCTCACCTTGCCCACCTCGCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGGCCACCAGCCCAGCCTaGATCTGGAGCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLATSPA*IWSQRQ
Trigger: CTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR GCA 72 bp AGCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGA +
Preference number: 3 (lower is better)
Translates to: SIWTLSAGRAAS*PSPGQPLCGSR
Trigger: TCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR GCA 72 bp CCCATGCACCATGGCCTGCAGCATCTGGACCTTGTCTaGTGGCCGAGCAGCCTCTTGCCCGTCCCCTGGGCA +
Preference number: 3 (lower is better)
Translates to: PMHHGLQHLDLV*WPSSLLPVPWA
Trigger: TGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCATGGTGCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 72 bp TGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTaGGCCCTGGTCCCTGCCAGAGAAGATCCTGGCACC +
Preference number: 3 (lower is better)
Translates to: WCHWGLLPHPGP*ALVPAREDPGT
Trigger: GGTGCCAGGATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAATCCACATCCGGGGCCTaGGGCCCTGGTCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: GHTEPARQLPVLPSQGWESTSGA*GPGPCQ
Trigger: CTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGA...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR GCA 72 bp TGGCAGCCGAGCCGTGGCCCTCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATTGGTGGAGAAGTTGGC +
Preference number: 3 (lower is better)
Translates to: WQPSRGPQGWWP*PWVAVIGGEVG
Trigger: GCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CAA 90 bp CCTTGTGGCACTCCACCCGTGGCCGAAGACCCAGCCCAAAGAGCTGCTCCACCTTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: PCGTPPVAEDPAQRAAPPWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...AGGTGGAGCAGCTCTTTGGGCTGGGTCTTCGGCCACGGGTGGAGTGCCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR TCA 72 bp TTGGTGGAGAAGTTGGCCTTTGGGTCTGGGGCGGCCTaGGGCATAGGTCTGACGGTGGCAGTGGGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LVEKLAFGSGAA*GIGLTVAVGAA
Trigger: TGCTGCCCCCACTGCCACCGTCAGACCTATGCCTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR GCA 72 bp TGGCACTCCTCTGTGGTCACCCCATGCACCATGGCCTaGAGCATCTGGACCTTGTCTGCTGGCCGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: WHSSVVTPCTMA*SIWTLSAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 72 bp ATCGCGGACAATGGGCAGGATGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCACTTGTGGAGTGGCATA +
Preference number: 3 (lower is better)
Translates to: IADNGQDAGACP*ARSLDHLWSGI
Trigger: TATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCCGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 72 bp CCGAGCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTaGGTTGCTGTTATTGGTGGAGAAGTTGGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: PSRGPQGWWPCP*VAVIGGEVGLW
Trigger: CCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR GCA 72 bp CCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGTTGGCCTTTGGGTCTG +
Preference number: 3 (lower is better)
Translates to: PWPSGMVAVPLG*CYWWRSWPLGL
Trigger: CAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 72 bp TCAGGGATGGTGGCCGTGCCCCTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTGGGTCTGGGGCGGCCT +
Preference number: 3 (lower is better)
Translates to: SGMVAVPLGCCY*WRSWPLGLGRP
Trigger: AGGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CAA 90 bp ACTGCTCTCCAGTCAACCATCAGCGTTTGTGATGAGCAGGGCCACAGGAGCCCAGCCACCAGCCCAGCCTaGATCTGGAGCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TALQSTISVCDEQGHRSPATSPA*IWSQRQ
Trigger: CTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC...TGGGCTCCTGTGGCCCTGCTCATCACAAACGCTGATGGTTGACTGGAGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CAA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGCCACCAGCCCAGCCTaGATCTGGAGCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SSLASCQSNPPEESLGHTATSPA*IWSQRQ
Trigger: CTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 72 bp TTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTaGGGGCTGAACCAAGGTGTGCAGAACAGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: FTRLGTSHLLGH*GLNQGVQNSAG
Trigger: CCCAGCGCTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 72 bp GAGGGCGCTCAGGCAGCAGGTAGTAATGAGTGCTGCTaGCCTTCCTGCCATCGCGGACAATGGGCAGGATGC +
Preference number: 3 (lower is better)
Translates to: EGAQAAGSNECC*PSCHRGQWAGC
Trigger: GCATCCTGCCCATTGTCCGCGATGGCAGGAAGGTCAGCAGCACTCATTACTACCTGCTGCCTGAGCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR CCA 72 bp GGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTaGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: GGTGQTGKYWCH*GLLPHPGPWAL
Trigger: CAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 72 bp GTCTGTCCTCTGGCTTGTGGGCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAGGGCAGTCCTCCGGCC +
Preference number: 3 (lower is better)
Translates to: VCPLACGPSTGP*HCRCLEGSPPA
Trigger: GGCCGGAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR CCA 72 bp CCCTGGGTTGCTGTTATTGGTGGAGAAGTTGGCCTTTaGGTCTGGGGCGGCCTGAGGCATAGGTCTGACGGT +
Preference number: 3 (lower is better)
Translates to: PWVAVIGGEVGL*VWGGLRHRSDG
Trigger: ACCGTCAGACCTATGCCTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGCCACCAGCCCAGCCTaGATCTGGAGCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SIAGATTLATEADGNTSDATSPA*IWSQRQ
Trigger: CTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGCCACCAGCCCAGCCTaGATCTGGAGCCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: IAGATTLATEADGNTSDSATSPA*IWSQRQ
Trigger: CTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp CACACAGGGTCCGCGTATTCTGCCCACGCCACCAGTAGTTCTCAGCCCTTCCCTAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 3 (lower is better)
Translates to: HTGSAYSAHATSSSQPFPRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...AGGGAAGGGCTGAGAACTACTGGTGGCGTGGGCAGAATACGCGGACCCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CAA 90 bp GAGCCTCCAGCAGGAAGTCCCGAAGAGCCACAAATGTGGGTCTGTCCTCTGGCTGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 3 (lower is better)
Translates to: EPPAGSPEEPQMWVCPLADIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...AGCCAGAGGACAGACCCACATTTGTGGCTCTTCGGGACTTCCTGCTGGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATCCACATCCGGGGCCTaGGGCCCTGGTCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRSTSGA*GPGPCQ
Trigger: CTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR TCA 72 bp CAGCAGTGGCGGGGGTCACTGTCACCATGTCCTGTGTaGATGAAGCTATTCTGTAGAGGCTGGCTGATGTCC +
Preference number: 3 (lower is better)
Translates to: QQWRGSLSPCPV*MKLFCRGWLMS
Trigger: GGACATCAGCCAGCCTCTACAGAATAGCTTCATTCACACAGGACATGGTGACAGTGACCCCCGCCACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238799.2
3UTR CCA 72 bp GAAGTCCCGAAGAGCCACAAATGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTGGACCATGACATTGTA +
Preference number: 3 (lower is better)
Translates to: EVPKSHKCGSVL*LVGPALDHDIV
Trigger: TACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACATTTGTGGCTCTTCGGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CAA 90 bp GGATGTGCAGTTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 3 (lower is better)
Translates to: GCAVYLAPQSPEEPACQWRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...CCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAACTGCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR CCA 72 bp GTGTGGCCAACACATCCTTCTTGTCCATGTCAAGCCTaGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: VWPTHPSCPCQA*LPVSLIPQRKA
Trigger: GGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGATGTGTTGGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR-3UTR CAA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: QVHSEATGHILSNTPHSYGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR TCA 72 bp AGCCTGGATCACTTGTGGAGTGGCATACTTAGGGTCTaGGGCAAAGCTTTGAGTGGTGGGCATGGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: SLDHLWSGILRV*GKALSGGHGLS
Trigger: GGAAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR-3UTR CAA 90 bp GCCCTTCCCTCGATGACAGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 3 (lower is better)
Translates to: ALPSMTVMTSFIWMCSLSDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...AGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
3UTR-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
3UTR TCA 72 bp AAGTTCCTAAGACCAGCCAAGCCCACAAGTTCACAGTaGAGCTACAGGTCACATTCTGTCCAACACTCCACA +
Preference number: 3 (lower is better)
Translates to: KFLRPAKPTSSQ*SYRSHSVQHST
Trigger: TGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTCTTAGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CCA 72 bp AGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGT +
Preference number: 3 (lower is better)
Translates to: SDDVIHLDVQFI*LLKVLKSPHVS
Trigger: ACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAACTGCACATCCAGATGAATGACGTCATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCGTTCCCTCCTCCGGCTaGATGCTGCTGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSVPSSG*MLLLPS
Trigger: GCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAAC...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRLCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGGTGAAGATGGCAGGCTaGGGTGGGCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGVKMAG*GGRGGG
Trigger: GCCTCCACCTCGCCCACCTCAGCCTGCCATCTTCAC...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCCTCCTCCGGCTGCATaGTGCTGCTCCCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLPPPAA*CCSPAL
Trigger: CAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGTCCCACAGCCGCCTCTaGCCAGGCCGGCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLSHSRL*PGRPMP
Trigger: TGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGA...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGCCGTCGCCGCAGTCTaGCCAGGAGAGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRAVAAV*PGEGRR
Trigger: TCTCCTTCCCTCTCCTGGCCAGACTGCGGCGACGGC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCAGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCACCCCATGCACCATaGCCTGCAGCATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSSPHAP*PAASGP
Trigger: AGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGA...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
3UTR CAA 72 bp CTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTaGGGCCCTGGTCCCTGCCAGAGAAGATCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVPLGSPSTSGA*GPGPCQRRSWH
Trigger: GTGCCAGGATCTTCTCTGGCAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 72 bp GTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCGGGGCAGGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VGPALDHDIVDV*RAVLRPGQALP
Trigger: GGGGAGCGCCTGCCCCGGCCGGAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGGTGAAGATGGCAGGCTaGGGTGGGCGAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLVKMAG*GGRGGG
Trigger: GCCTCCACCTCGCCCACCTCAGCCTGCCATCTTCAC...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPERQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACTGAGGTGGGCGAGGTaGAGGCTCCCTTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPLRWAR*RLPFHP
Trigger: CGGGTGAAAAGGGAGCCTCCACCTCGCCCACCTCAG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
3UTR CAA 72 bp GGGCAGTCCTCCGGCCGGGGCAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATCTGGCTGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GQSSGRGRRSPS*SILCRIWLPLR
Trigger: CCTCAATGGCAGCCAGATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCTGCCCCGGCCGGAGGACTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLSVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCAGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCTACTGGGCAGCCCTCTaGACACTCCAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAYWAAL*TLQLWL
Trigger: GAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTA...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCTCCAGCTGTGGCTCTaGAGGGCCGCCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRLQLWL*RAAWHS
Trigger: GGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGCCTCCTCCGGCTGCATaGTGCTGCTCCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEPPPAA*CCSPAS
Trigger: AGAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGG...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCATCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSLFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCTCTGCAGGGCCGCCTGGCACTCCTCTGTGGTCACCCCATGCACCATGGCCTCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSAGPPGTPLWSPHAPWPPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...AGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTEAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGATGGCCTGCAGCATCTaGACCTTGTCTGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRMACSI*TLSAGR
Trigger: TCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCAT...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRLCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSSEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCAAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPRASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACTCCAGCTGTGGCTCTaGAGGGCCGCCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPLQLWL*RAAWHS
Trigger: GGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLCGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGTATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGTATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCACGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTGCACCATGGCCATCTaGACCTTGTCTGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLCTMAI*TLSAGR
Trigger: TCGGCCAGCAGACAAGGTCCAGATGGCCATGGTGCA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCATGGCCTGCAGCATCTaGACCTTGTCTGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAMACSI*TLSAGR
Trigger: TCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCAT...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCACCTTGCTCATCCATaGCTTGCGTTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGHLAHP*LAFAHG
Trigger: GCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGCAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCTCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSSVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTELCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLRASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWERPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGCTGAGCCTCCAGCAGGAAGTCCCGAAGAGCCACAAATGTGGGTCTGTCCTCCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLSLQQEVPKSHKCGSVLRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...GAGGACAGACCCACATTTGTGGCTCTTCGGGACTTCCTGCTGGAGGCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR GCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGCCTCCGGCTGCATGCTaGTGCTCCCCAGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQPPAAC*CSPALC
Trigger: ACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGG...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACACAGGGTCCGCGTATTCTGCCCACGCCACCAGTAGTTCTCAGCCCTTCCCTGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: HTGSAYSAHATSSSQPFPVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...AGGGAAGGGCTGAGAACTACTGGTGGCGTGGGCAGAATACGCGGACCCTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCATATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCATATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 72 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTaGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPV*PSQGWERPTSW
Trigger: CCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 72 bp GCCGTGGCCCTCAGGGATGGTGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAGTTGGCCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AVALRDGGRAPG*LLLVEKLAFGS
Trigger: AGACCCAAAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR TCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACACCTTGCTCATCCATaGCTTGCGTTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAHLAHP*LAFAHG
Trigger: GCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAATCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWESVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCTCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGSVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTCTGCAGGGCCGCCTGGCACTCCTCTGTGGTCACCCCATGCACCATGGCCTGCGAACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCRAAWHSSVVTPCTMACELACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTTC...GCAGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR GCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGCSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTTGAGGGCAGTCCTCAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LVGPALDHDIVDVLRAVLRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...GAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR GCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCATGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEACRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCTCTGTGGTCACCCCATaGACCATGGCCATCTGGACC +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSSVVTP*TMAIWT
Trigger: GGTCCAGATGGCCATGGTGCATGGGGTGACCACAGA...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTCCCACAGCCGCCTCTaGCCAGGCCGGCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSSHSRL*PGRPMP
Trigger: TGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEATCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGCCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCACGCCACGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: TFRGKGPTHRVRVFCPRHVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...GTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKACGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPLFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCCTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQALFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLCGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRSLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCACCTTGCTCATCCATaGCTTGCGTTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLHLAHP*LAFAHG
Trigger: GCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTG...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGCAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTEQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGCCACAAATGTGGGTCTGTCCTCTGGCTTGTGGGCCCAGCACTGGACCATGACCAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: SHKCGSVLWLVGPALDHDQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...GTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACATTTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR TCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGTCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTESVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCATCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPSVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTESGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ATSPALIWSQRQATQSLPLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCATCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEASEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGGGGCTTGGGGTCCTTaGACTAGCGTGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQGAWGP*TSVLLM
Trigger: CATCAACAGCACGCTAGTTCAAGGACCCCAAGCCCC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR GCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKARASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPERWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCCTCCAGCTGTGGCTCTaGAGGGCCGCCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSLQLWL*RAAWHS
Trigger: GGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAG...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCTCCAGCTGTGGCTCTaGAGGGCCGCCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDLQLWL*RAAWHS
Trigger: GGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCTCCCACAGCCGCCTCTaGCCAGGCCGGCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTSHSRL*PGRPMP
Trigger: TGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGA...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTTCCCACAGCCGCCTCTaGCCAGGCCGGCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGSHSRL*PGRPMP
Trigger: TGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGA...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTESMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTEVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPECGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKANRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWENRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGGCTCTTCCGGGCTCTaGGCCTCCCGCAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEGSSGL*ASRRKR
Trigger: GCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTARGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAATGGCCTGCAGCATCTaGACCTTGTCTGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEMACSI*TLSAGR
Trigger: TCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCAT...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTCACCCCATGCACCATaGCCTGCAGCATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKASPHAP*PAASGP
Trigger: AGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
3UTR CAA 72 bp GCTTGCTCTAGGTTCCAGTCGAACATCTCTAGGACCTaGTGGCACTCCACCCGTGGCCGAAGACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ACSRFQSNISRT*WHSTRGRRPSP
Trigger: TGGGCTGGGTCTTCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGATGTTCGACTGGAACCTAGAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR TCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALLCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATTACTGGGCAGCCCTCTaGACACTCCAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHYWAAL*TLQLWL
Trigger: GAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTA...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALRASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GAGCCTCCAGCAGGAAGTCCCGAAGAGCCACAAATGTGGGTCTGTCCTCTGGCTAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EPPAGSPEEPQMWVCPLARASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...AGCCAGAGGACAGACCCACATTTGTGGCTCTTCGGGACTTCCTGCTGGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEERQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTAGGCAGGTGAGGCTCTaGAGGGTCCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGRQVRL*RVPSPG
Trigger: GCCAGGGGAGGGGACCCTGCAGAGCCTCACCTGCCT...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCCCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPECRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCTCCAGCTGTGGCTCTaGAGGGCCGCCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGLQLWL*RAAWHS
Trigger: GGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGCCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACCCAGCCCAAAGAGCTaGTCCACCATCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPPSPKS*STIWTL
Trigger: CAAGGTCCAGATGGTGGAGCAGCTCTTTGGGCTGGG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCCGGCTGCATGCTGCTaGTCCCCAGCCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAPAACC*SPASAV
Trigger: GACAGCAGAGGCTGGGGAGCAGCAGCATGCAGCCGG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPETCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGACCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTVLGAG*VGRCSV
Trigger: AACTGAGCACCTCCCGACCCACCCAGCACCTAGGAC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSCGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCGTGGCCCTCAGGGATaGTGGCCGTGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNRGPQG*WPCPWV
Trigger: AACCCAGGGGCACGGCCACCATCCCTGAGGGCCACG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGATGGCAGGCTGAGGTaGGCGAGGTGGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDDGRLR*ARWRLP
Trigger: AGGGAGCCTCCACCTCGCCCACCTCAGCCTGCCATC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGCACCTTGCTCATCCATaGCTTGCGTTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQHLAHP*LAFAHG
Trigger: GCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTG...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPESSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GTCCTCTGGCTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTTGAGGGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: VLWLVGPALDHDIVDVLRAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...CCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR TCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGLCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGCTCTGCAGTCTGCACTaGGCTGGGCGGCTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQLCSLH*AGRLAS
Trigger: GGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAG...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGATGTTGGCTTCTGAGTaGAGATGGCAGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRMLASE*RWQAEV
Trigger: CACCTCAGCCTGCCATCTTCACTCAGAAGCCAACAT...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGATGTTGGCTTCTGAGTaGAGATGGCAGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQMLASE*RWQAEV
Trigger: CACCTCAGCCTGCCATCTTCACTCAGAAGCCAACAT...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAACCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCCCACTGCTGCGGTCTaGCTTGGTGCCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTPTAAV*LGAWHS
Trigger: CGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQCRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCCTCCGGCTGCATGCTaGTGCTCCCCAGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLPPAAC*CSPALC
Trigger: ACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCCTCCTCCGGCTGCATaGTGCTGCTCCCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNPPPAA*CCSPAL
Trigger: CAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGTTCCCTCCTCCGGCTaGATGCTGCTGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEVPSSG*MLLLPS
Trigger: GCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAAC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGTTCCCTCCTCCGGCTaGATGCTGCTGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEVPSSG*MLLLPS
Trigger: GCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAAC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCCTCCGGCTGCATGCTaGTGCTCCCCAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNPPAAC*CSPASA
Trigger: AGCAGAGGCTGGGGAGCAGCAGCATGCAGCCGGAGG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCATCCCACAGCCGCCTCTaGCCAGGCCGGCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLASHSRL*PGRPMP
Trigger: TGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGA...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LATSPALIWSQRQATQSLILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGCTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQLFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWELFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPCGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGTGGCAGCCGAGCCGTaGCCCTCAGGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRVAAEP*PSGMVA
Trigger: GGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCAC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTGGGCAGCCCCTCTGTaGCAGCCGAGCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYWAAPL*QPSRGP
Trigger: AGGGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGCTGAGGTGGGCGAGGTaGAGGCTCCCTTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGLRWAR*RLPFHP
Trigger: CGGGTGAAAAGGGAGCCTCCACCTCGCCCACCTCAG...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGATGGCAGGCTGAGGTaGGCGAGGTGGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGDGRLR*ARWRLP
Trigger: AGGGAGCCTCCACCTCGCCCACCTCAGCCTGCCATC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAATGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGNN +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWECGALW*CLVQQX
Trigger: NNCTTGCTGGACAAGACACCACCACAGAGCCCCACA...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238815.2
CDS-3UTR TCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTTCCTTGTCGATCTTATGCAGGATCTGGCTGCCATTGAGGCCAATCCAGGGCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PFLVDLMQDLAAIEANPGPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...CCCTGGATTGGCCTCAATGGCAGCCAGATCCTGCATAAGATCGACAAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR TCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSSEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRSEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKASEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAATCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWESEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTTACTGGGCAGCCCTCTaGACACTCCAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAYWAAL*TLQLWL
Trigger: GAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTA...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQKYCCS*TSDSSS
Trigger: GGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTT...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGKYCCS*TSDSSS
Trigger: GGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTT...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEKYCCS*TSDSSS
Trigger: GGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTT...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHSMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGTCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQSMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGCSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKACSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAACGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEERPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTEKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGGACAATGGGCAGGATaGAGGGGCCTGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPGQWAG*RGLPVG
Trigger: GCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GATGACAGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTGGCTCCTCAAACCCTGGCAGGCTCCCTaGGGTGGGGGAGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: DDSDDVIHLDVQFIWLLKPWQAP*GGGGLP
Trigger: CGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGG...TTTGAGGAGCCAGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR CCA 90 bp GGATGTGCAGTTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GCAVYLAPQSPEEPACQWSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...CCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAACTGCACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: TLATSPALIWSQRQATQSILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LGHTLATSPALIWSQRQAMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGGGTCAGCTGGCCAGTaGGGACCTGTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAGSAGQ*GPVAAA
Trigger: TGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQTRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGCAGGGGCCTGCCCGTaGGCCAGGAGCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATAGACP*ARSLDH
Trigger: GTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGC...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGGCCCTCAGGGATGGTaGCCGTGCCCCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYGPQGW*PCPWVA
Trigger: AGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAACAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEQASGT*RPHSPS
Trigger: AGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTG...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALSSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPSSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGSSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGCTGATGTCCTGGGCTaGCAGGCCAGCCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAADVLG*QASHGG
Trigger: ACCTCCGTGGCTGGCCTGTCAGCCCAGGACATCAGC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGSGQAS*SRWTGG
Trigger: ACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGA...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAATACTGGGCAGCCCTCTaGACACTCCAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEYWAAL*TLQLWL
Trigger: GAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTA...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGTCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGSMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPSMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALCSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPVLPSQGWERPTSWGTECSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FIWLLKVLKSPHVSGLSLRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...GAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR GCA 90 bp GTCCTCTGGCTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTTGAGGCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLWLVGPALDHDIVDVLRRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...CCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR GCA 90 bp ACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCACGCCACCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: TFRGKGPTHRVRVFCPRHQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...GTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR GCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTAGGGCAGGGGGCATCTaGGCCTGCTCAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGRAGGI*ACSGTK
Trigger: CTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCT...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTCRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGCGGTAGTGGAGAGCTaGCAGGTGGCACTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPAVVES*QVALGG
Trigger: GCCCCCTAGTGCCACCTGGCAGCTCTCCACTACCGC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCCCAGCCCAAAGAGCTaGTCCACCATCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDPSPKS*STIWTL
Trigger: CAAGGTCCAGATGGTGGAGCAGCTCTTTGGGCTGGG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTTCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAATCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEESMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGAGCCCGCATGTCAGTaGGCTGAGCCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAEPACQ*AEPPAG
Trigger: TCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGGCTGGCTGATGTCCTaGGCTGACAGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYGWLMS*ADRPAT
Trigger: CGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLATRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCAGTCTGCACTGAGCTaGGCGGCTTGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPQSALS*AACLRP
Trigger: AGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KQESTGATGVSFHIRGLGQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPSLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACCTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATTCACCCCATGCACCATaGCCTGCAGCATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDSPHAP*PAASGP
Trigger: AGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGA...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGCCGTCGCCGCAGTCTaGCCAGGAGAGGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYAVAAV*PGEGRR
Trigger: TCTCCTTCCCTCTCCTGGCCAGACTGCGGCGACGGC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATTCTGAGGCAAAGCTTTaGGTGGTGGGCATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHSEAKL*VVGMVF
Trigger: AAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGA...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHKYCCS*TSDSSS
Trigger: GGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTT...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCGTCCCATTCACCCCTaGGCACCACGCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPRPIHP*APRQRS
Trigger: GCTCCTTTGGCGTGGTGCGCAGGGGTGAATGGGACG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCATCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAACAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPVVHGL*LAQHVR
Trigger: CCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGAC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGACGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGGGAACCCCCAGCAGTaGCGGGGGTCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATGNPQQ*RGSLSP
Trigger: TGGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCC...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAACCCGTCCTAGGTGCTaGGTGGGTCGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATTRPRC*VGREVL
Trigger: GAGCACCTCCCGACCCACCCAGCACCTAGGACGGGT...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAAGQGV*VLTHRV
Trigger: GACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSCGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYVAVPV*GSVVVS
Trigger: AGACACCACCACAGAGCCCCACACGGGCACTGCCAC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCGCCTCCGCCCTGGGGTaGAAGGAACAGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAASALG*KEQVIL
Trigger: GAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGC...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACCCGGGGTGGCACCTaGGGCTTGTCATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLATRGGT*GLSSPP
Trigger: AGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGT...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHSLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTGCCATCGCGGACAATaGGCAGGATGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPCHRGQ*AGCRGL
Trigger: CAGGCCCCTGCATCCTGCCCATTGTCCGCGATGGCA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCACTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGATGGCCTGCAGCATCTaGACCTTGTCTGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQMACSI*TLSAGR
Trigger: TCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCAT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp CTCTGGCTTGTGGGCCCAGCACTGGACCATGACATTGTAGATGTCTTGAGGGCATCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: LWLVGPALDHDIVDVLRASSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...TGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR TCA 90 bp CCTTCCTTGTCGATCTTATGCAGGATCTGGCTGCCATTGAGGCCAATCCAGGGCTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: PSLSILCRIWLPLRPIQGSSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...GCCCTGGATTGGCCTCAATGGCAGCCAGATCCTGCATAAGATCGACAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR TCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGCAGCCAGATCCCGGTaGATGAAGCGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRAARSR*MKRLDS
Trigger: GGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGGATCTGGCTGCCATTaGGGCCAATCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAGSGCH*GQSRAP
Trigger: AGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGGGCTCCTCAAAGTCCTaGAGAGCCCGCATGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWGSSKS*RARMSV
Trigger: CACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCC...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCATCTGTAGAGGCTGGCTaGTGTCCTGGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLASVEAG*CPGLTG
Trigger: GCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGA...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGGGGTCCTTGAACCTTaGGGAGACAGAGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYGVLEP*GDRGSR
Trigger: CCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGGGGCTTGGGGTCCTTaGACCTTGAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRGAWGP*TLRRQR
Trigger: CCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATACTGGGCAGCCCTCTaGACACTCCAGCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRYWAAL*TLQLWL
Trigger: GAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR GCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGARASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAATCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GHTEPARQLPVLPSQGWESFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGCRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDTCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCCCTTCCCTCGATGACAGTGATGACGTCATTCATCTGGATGTGCAGTTTATCTTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALPSMTVMTSFIWMCSLSSMASG*LSTSGF
Trigger: GAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGA...AGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTGTGGGTCTGTCCTCTaGCTTGTGGGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPCGSVL*LVGPAL
Trigger: CAGTGCTGGGCCCACAAGCCAGAGGACAGACCCACA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SIAGATTLATEADGNTSDLFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACTTGTCATCACCTCCTaGGGTCGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATLVITS*GRGGGQ
Trigger: CTGACCCCCTCCCCGACCCCAGGAGGTGATGACAAG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGAATAGGTACCCGGGGTaGCACCTGGGGCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWNRYPG*HLGLVI
Trigger: GATGACAAGCCCCAGGTGCCACCCCGGGTACCTATT...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCTATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTASSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACCAGATCCCGGTGAATaGAGCGCTTGGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAPDPGE*SAWTPG
Trigger: ACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALKYCCS*TSDSSS
Trigger: GGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTT...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTTGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTACSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTAGGGCTTCCGGAAGGTaGTCTGAGAGTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPRASGR*SESAGK
Trigger: CTTCCCAGCACTCTCAGAGCACCTTCCGGAAGCCCT...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHRWSSE*MALTSR
Trigger: CCGGGAGGTCAATGCCATGCATTCACTAGACCACCG...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPIHGQL*QGGCTG
Trigger: CCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGAT...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAATGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEECRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACGCCGTGCCCCTGGGTTaGTGTTATTGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHAVPLG*CYWWRS
Trigger: ACTTCTCCACCAATAACAGCAACCCAGGGGCACGGC...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACCAGGGATGGTGGCCGTaGCCCTGGGTTGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYQGWWP*PWVAVI
Trigger: AATAACAGCAACCCAGGGGCACGGCCACCATCCCTG...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACCCAGCCCAAAGAGCTaGTCCACCATCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAPSPKS*STIWTL
Trigger: CAAGGTCCAGATGGTGGAGCAGCTCTTTGGGCTGGG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGTCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQTCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CCCTTCCTTGTCGATCTTATGCAGGATCTGGCTGCCATTGAGGCCAATCCAGGGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PFLVDLMQDLAAIEANPGRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...CCCTGGATTGGCCTCAATGGCAGCCAGATCCTGCATAAGATCGACAAGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp TTTATCTGGCTCCTCAAAGTCCTGAAGAGCCCGCATGTCAGTGGGCTGAGCCTCCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: FIWLLKVLKSPHVSGLSLRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...GAGGCTCAGCCCACTGACATGCGGGCTCTTCAGGACTTTGAGGAGCCAGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGTSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: CQSNPPEESLGHTLATSPMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHGQEGP*GFPGTV
Trigger: AACTGTACCTGGGAAACCCCATGGACCCTCCTGACC...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCTGTGGGGCTCTGTGGTaGTGTCTTGTCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGACGALW*CLVQQG
Trigger: TCCTTGCTGGACAAGACACCACCACAGAGCCCCACA...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACCCGTGTGGGGCTCTGTaGTGGTGTCTTGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYPCGAL*WCLVQQ
Trigger: TTGCTGGACAAGACACCACCACAGAGCCCCACACGG...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATGLPPP*GGRNRL
Trigger: TAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCC...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACATCTCTAGGACCTTGTaGCACTCCACCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYISRTL*HSTRGR
Trigger: TCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGAT...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATCACCCCATGCACCATaGCCTGCAGCATCTGGACCT +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRSPHAP*PAASGP
Trigger: AGGTCCAGATGCTGCAGGCCATGGTGCATGGGGTGA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR TCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAATCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEESSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAACCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTTCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGSMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAATCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEESMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAAGATCCCAGAGGTaGCAGCTCTGTCACCATCTT +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGQRSQR*QLCHHL
Trigger: AAGATGGTGACAGAGCTGGCACCTCTGGGATCTTTG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATTCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVGCWLALLCGQHILLVHSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTTCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSLASCQSNPPEESLGHTSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACCCCAGCCCAAAGAGCTaGTCCACCTTCAGATACTGG +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYPSPKS*STFRYW
Trigger: CCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGG...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115126.9
ENSMUST00000238856.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHTCVCT*PSSSSR
Trigger: CCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGT...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LSMSSLASCQSNPPEESLRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCCAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEESLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATATTGGTGGAGAAGTTaGCCTTTGGGTCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRYWWRS*PLGLGR
Trigger: CCGCCCCAGACCCAAAGGCCAACTTCTCCACCAATA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGCTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
3UTR CAA 72 bp TGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTaGGCAACAGAGGCTGATGGGAACACATCAGATAGC +
Preference number: 4 (lower is better)
Translates to: WKKQISIAGATT*ATEADGNTSDS
Trigger: GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238815.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QIATGEEQVKQESTGATGHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYKISAV*TELGGL
Trigger: CAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTT...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYCRIHS*CSAWKI
Trigger: GATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: DQPSPQVHSEATGHILSNRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGACAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATCCAGGTGTCACTaGCATGGGAGAAAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLATSRCH*HGRKSV
Trigger: CACGGACTTTCTCCCATGCCAGTGACACCTGGATGT...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGATCTTATGCAGGATCTaGCTGCCATTGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQILCRI*LPLRPI
Trigger: GATTGGCCTCAATGGCAGCCAGATCCTGCATAAGAT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGACTATTCTGTAGAGGCTaGCTGATGTCCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRLFCRG*LMSWAD
Trigger: GTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAG...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPSCCSA*KISAVC
Trigger: GCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCCAAAGCTTTGAGTGGTaGGCATGGTCTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGAQSFEW*AWSFQV
Trigger: CACCTGGAAAGACCATGCCCACCACTCAAAGCTTTG...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWSLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHSLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCAGCCTGGATCACTTGTaGAGTGGCATACTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGASLDHL*SGILRV
Trigger: GACCCTAAGTATGCCACTCCACAAGTGATCCAGGCT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACACCTTGCTCATCCATaGCTTGCGTTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATHLAHP*LAFAHG
Trigger: GCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTCTTCATGGGTAGTGTaGGCACCACACCATACAAGC +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYSSWVV*APHHTS
Trigger: GCTTGTATGGTGTGGTGCTCACACTACCCATGAAGA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACCCAGCACTGGACCATaGCATTGTAGATGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLAPSTGP*HCRCLE
Trigger: CTCAAGACATCTACAATGTCATGGTCCAGTGCTGGG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPLLACC*WSRPQS
Trigger: ACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCATCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLASMTCV*TWPSSS
Trigger: AGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGA...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCTCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IAGATTLATEADGNTSDSSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: THQIATGEEQVKQESTGARMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACAGGTGTCACTGGCATaGGAGAAAGTCCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATQVSLA*EKVRVF
Trigger: GAAGACACGGACTTTCTCCCATGCCAGTGACACCTG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGATGTGCAGTTTATCTaGCTCCTCAAAGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEDVQFI*LLKVLK
Trigger: CTTCAGGACTTTGAGGAGCCAGATAAACTGCACATC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATGCTCATCCATGACTTaGGTTTGCACATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATCSSMT*VCTWPS
Trigger: GGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCA...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTTCCTTGTCGATCTTATaGAGGATCTGGCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPSLSIL*RIWLPL
Trigger: CAATGGCAGCCAGATCCTGCATAAGATCGACAAGGA...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: ALFLWKKQISIAGATTLARMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LATEADGNTSDSNRGGTGMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR TCA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACCATGTCCTGTGTGAATaGAGCTATTCTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QVHSEATGHILSNTPHSYHVLCE*SYSVEA
Trigger: AGCCTCTACAGAATAGCTTCATTCACACAGGACATG...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATRMRFR*SSECMA
Trigger: TGCCATGCATTCACTAGACCACCGAAACCTCATTCG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACTGGGTTGCTGTTATTaGTGGAGAAGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATLGCCY*WRSWPL
Trigger: CAAAGGCCAACTTCTCCACCAATAACAGCAACCCAG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR GCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATCATTCATCTGGATGTaGAGTTTATCTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRSFIWM*SLSGSS
Trigger: TGAGGAGCCAGATAAACTGCACATCCAGATGAATGA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CCA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAATGACGTCATTCATCTaGATGTGCAGTTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LFLWKKQISIAGATTLATMTSFI*MCSLSG
Trigger: GCCAGATAAACTGCACATCCAGATGAATGACGTCAT...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 90 bp TGCACCATGGCCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGAGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: CTMAIWTLSAGRAAS*PSPGQPLCGSRAVA
Trigger: GGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGCCATGGTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS GCA 90 bp AGCTGCTCCACCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGAGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SCSTIWTLSAGRAAS*PSPGQPLCGSRAVA
Trigger: GGCCACGGCTCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGAGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 90 bp CTCACCCCCACTGCTGCGGTCTGCCTTGGTGCCTGGCACTCGGGCTaGGGGCTTTGCCAGCCACAGCCCTCGAGGCAGGGCTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LTPTAAVCLGAWHSG*GLCQPQPSRQGWLP
Trigger: AGGAAGCCAGCCCTGCCTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGGGGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGLGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 90 bp GCAGCTCCAACAGCCAGCCCGTTCCCTCCTCCGGCTGCATGCTGCTaGTCCCCAGCCTTGTGTACAGCCGTCGCCGCAGTCTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AAPTASPFPPPAACC*SPALCTAVAAVWPG
Trigger: TCCTGGCCAGACTGCGGCGACGGCTGTACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR CAA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 90 bp ACCTCGGACAGCAGCTCCAACAGCCAGCCCGTTCCCTCCTCCGGCTaGATGCTGCTGCTCCCCAGCCTTGTGTACAGCCGTCGCCGCAGT +
Preference number: 5 (lower is better)
Translates to: TSDSSSNSQPVPSSG*MLLLPSLVYSRRRS
Trigger: ACTGCGGCGACGGCTGTACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGGAGCTGCTGTCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR CAA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRLRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTCCCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PWEPQAVVGPSGLRQGSSLCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...GGAGCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCAGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: ATSPALIWSQRQATQSLPVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGTCCACCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRSTIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGA...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS TCA 90 bp GCCACAGCCCTCGAGGCAGGGCTGGCTTCCTCAGGCCAAGCCTCTTaGAGTCGCTGGACAGGGGGTCTGGGTCCTCACTCACAGGGTCGT +
Preference number: 5 (lower is better)
Translates to: ATALEAGLASSGQAS*SRWTGGLGPHSQGR
Trigger: ACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCAGCCCTGCCTCGAGGGCTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGTCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGHTLATSPALIWSQRQALRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: ATSPALIWSQRQATQSLPLRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQTELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTTCCACCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLSTIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGA...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS GCA 90 bp GTCCAGCAAGGAGCAGGCATCCATGGCCAACTGTGCCAAGGAGGGTaGACAGGGCCGAGGGGTTGGGACCACAGGCTCCTCACCGAAGTC +
Preference number: 5 (lower is better)
Translates to: VQQGAGIHGQLCQGG*TGPRGWDHRLLTEV
Trigger: GACTTCGGTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp GAACACTCCAGCTGTGGCTCTGCAGGGCCGCCTGGCACTCCTCTGTaGTCACCCCATGCACCATGGCCATCTGGACCTTGTCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EHSSCGSAGPPGTPL*SPHAPWPSGPCLLA
Trigger: GGCCAGCAGACAAGGTCCAGATGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS CCA 90 bp GTGGGCGAGGTGGAGGCTCCCTTTTCACCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTTCCACACTCAGCAGGTCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VGEVEAPFSPVLGAG*VGRCSVPHSAGQEG
Trigger: ACCCTCCTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAGGGAGCCTCCACCTCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115121.9
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCGATAGGCGGGTAATGTaGAGGTCATCTCGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSDRRVM*RSSRSL
Trigger: GAGGCTTCGAGATGACCTCAACATTACCCGCCTATC...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: RQATQSLPGSFLSCLHKALGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: GHTEPARQLPVLPSQGWELGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACCACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLLCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPTELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 90 bp TGGTGGTGTCTTGTCCAGCAAGGAGCAGGCATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGGCCGAGGGGTTGGGACCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: WWCLVQQGAGIHGQL*QGGCTGPRGWDHRL
Trigger: GAGCCTGTGGTCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGACAAGACACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp TGGGGCTCTGTGGTGGTGTCTTGTCCAGCAAGGAGCAGGCATCCATaGCCAACTGTGCCAAGGAGGGTGCACAGGGCCGAGGGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: WGSVVVSCPARSRHP*PTVPRRVHRAEGLG
Trigger: TCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGACAAGACACCACCACAGAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: LPGSHCPLGAAGSCGSFGRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...CCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LGHTLATSPALIWSQRQADIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...GGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCACTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: CQSNPPEESLGHTLATSPLGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALLGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCACACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: AGHTEPARQLPVLPSQGWWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...CCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCAGGGCAGCCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: VPWEPQAVVGPSGLRQGSPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...GCTGCCCTGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 90 bp TGCCGCATACACTCCTGCTGCAGTGCCTGGAAAATCTCTGCAGTCTaGACTGAGCTGGGCGGCTTGCCTCCGCCCTGGGGTGGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: CRIHSCCSAWKISAV*TELGGLPPPWGGRN
Trigger: GTTCCTTCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp CCAGTGGGGACCTGTAGCTGCCGCATACACTCCTGCTGCAGTGCCTaGAAAATCTCTGCAGTCTGCACTGAGCTGGGCGGCTTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: PVGTCSCRIHSCCSA*KISAVCTELGGLPP
Trigger: CGGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCAGCTACAGGTCCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LATSPALIWSQRQATQSLDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...CAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: RQATQSLPGSFLSCLHKALRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGAAAGCCTGGGGCACACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GKPGAHSSHQPSLDLEPEGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...CTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp TGCATGGCATTGACCTCCCGGATGAAGTCGTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTCAGGCACTTGACGGCCACACTCACC +
Preference number: 5 (lower is better)
Translates to: CMALTSRMKSSMASG*LSTSGFRHLTATLT
Trigger: GGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GLTVPWEPQAVVGPSGLRLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...CCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGTCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCCCTGGTCCCTGCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: TGATGVSFHIRGLGPWSLHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...CAGGGACCAGGGCCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: KQESTGATGVSFHIRGLGLRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: LPVLPSQGWERPTSWGTELRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: TLATSPALIWSQRQATQSLCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGCTGCCTGGGTCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PAAWVSLSPGSRRQLWVLPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...AAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGACCCAGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCTCACTGTCCCCTGGGAGCCGCAGGCAGTTGTGGGTCCTTCGGGCCTGAGGCACCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SHCPLGAAGSCGSFGPEAPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...TGCCTCAGGCCCGAAGGACCCACAACTGCCTGCGGCTCCCAGGGGACAGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SIAGATTLATEADGNTSDTELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALTELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTATELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAAGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GHTEPARQLPVLPSQGWEGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...TTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp GTCGGGAGGTGCTCAGTTCCACACTCAGCAGGTCAGGAGGGTCCATaGGGTTTCCCAGGTACAGTTCATCGATCCTGTCAGGGAACCCCC +
Preference number: 5 (lower is better)
Translates to: VGRCSVPHSAGQEGP*GFPGTVHRSCQGTP
Trigger: GGGGGTTCCCTGACAGGATCGATGAACTGTACCTGGGAAACCCCATGGACCCTCCTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCATCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: CQSNPPEESLGHTLATSPSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCACGCCACTCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: TFRGKGPTHRVRVFCPRHSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...GTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR CAA 90 bp GCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCCTGCCACACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: ATSPALIWSQRQATQSLPHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...TGGCAGGCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LSMSSLASCQSNPPEESLHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: RQATQSLPGSFLSCLHKALCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: DQPSPQVHSEATGHILSNTELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SFLSMSSLASCQSNPPEETELGG*PPPWGG
Trigger: TCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGT...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: LPVLPSQGWERPTSWGTEGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...CTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PVGCWLALLCGQHILLVHWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 90 bp CGTCCATGGCCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTTaGCGGCCACACTCACCTTGCTCATCCATGACTTGCGTTTGCACA +
Preference number: 5 (lower is better)
Translates to: RPWPLAGSARQASGT*RPHSPCSSMTCVCT
Trigger: TGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CCA 90 bp TCACAGGGTCGTATGTTGGCTTTTTCACCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTTCCACACTCAGCAGGTCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SQGRMLAFSPVLGAG*VGRCSVPHSAGQEG
Trigger: ACCCTCCTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAAGCCAACATACGACCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CCA 90 bp TGGCTTCCTCAGGCCAAGCCTCTTGAAGTCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTCGTATGTTGGCTTTTTCACCCGTCC +
Preference number: 5 (lower is better)
Translates to: WLPQAKPLEVAGQGV*VLTHRVVCWLFHPS
Trigger: GGACGGGTGAAAAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS-3UTR CAA 90 bp ACTCTAGCCACCAGCCCAGCCTTGATCTGGAGCCAGAGGCAGGCCACACAGAGCAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: TLATSPALIWSQRQATQSSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...GCTCTGTGTGGCCTGCCTCTGGCTCCAGATCAAGGCTGGGCTGGTGGCTAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: AASCLAFTRLGTSHLLGHRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...GTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCCTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTLGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: IAGATTLATEADGNTSDSGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: PVGCWLALLCGQHILLVHGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: RQATQSLPGSFLSCLHKALLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVGCWLALLCGQHILLVHGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SSLASCQSNPPEESLGHTGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...AGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGGCCACACAGAGCCTGCCAGGCAGCTTCCTGTCTTGCCTTCACAAGGCTATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RQATQSLPGSFLSCLHKAIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...AGCCTTGTGAAGGCAAGACAGGAAGCTGCCTGGCAGGCTCTGTGTGGCCTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCGCATGTCAGTGGGCTGAGCCTCCAGCAGGAAGTCCCGAAGAGCCACAAATGAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PACQWAEPPAGSPEEPQMSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...CATTTGTGGCTCTTCGGGACTTCCTGCTGGAGGCTCAGCCCACTGACATGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CAA 90 bp GCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCAAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: ACWLLARPAVWPTHPSCPRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...TGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: DQPSPQVHSEATGHILSNGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGTGCAGCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QIATGEEQVKQESTGATGCSIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCA...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS TCA 90 bp TCTCAGGGGCACACCAGGCAAAGGGCACCTTGCGGTGTTCTTGCATaGCATAGTGGTCATCATTCTGGGGCAGAGCTCGCATCAGTCCGA +
Preference number: 5 (lower is better)
Translates to: SQGHTRQRAPCGVLA*HSGHHSGAELASVR
Trigger: TCGGACTGATGCGAGCTCTGCCCCAGAATGATGACCACTATGTCATGCAAGAACACCGCAAGGTGCCCTTTGCCTGGTGTGCCCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp TGGCTTCCTCAGGCCAAGCCTCTTGAAGTCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTCGTATGTTGGCTTCTGAGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: WLPQAKPLEVAGQGV*VLTHRVVCWLLSED
Trigger: ATCTTCACTCAGAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115121.9
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AAACAGGAAAGTACTGGTGCCACTGGGGTCTCCTTCCACATCCGGGGCCTTGGGGATAGGCGGGTAATGTaGAGGTCATCTCGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KQESTGATGVSFHIRGLGDRRVM*RSSRSL
Trigger: GAGGCTTCGAGATGACCTCAACATTACCCGCCTATC...CCCAAGGCCCCGGATGTGGAAGGAGACCCCAGTGGCACCAGTACTTTCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGCCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GLLVAGSPCCVANTSFLSLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...GGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: LATEADGNTSDSNRGGTGLRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTCTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPLGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCACTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAG +
Preference number: 5 (lower is better)
Translates to: ALFLWKKQISIAGATTLALGLRA*PATALE
Trigger: CTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAG...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGACACAGGGCCGAGGGGTaGGGACCACAGGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRHRAEG*GPQAPH
Trigger: GTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTG...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: IAGATTLATEADGNTSDSGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGTGGAGAAGTTGGCCTTaGGGTCTGGGGCGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQWRSWP*GLGRPE
Trigger: CTCAGGCCGCCCCAGACCCAAAGGCCAACTTCTCCA...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LHKAGNVPPLGALRAEPRPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...CCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGTGCAGCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQCSIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCA...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS GCA 90 bp GTAATGTTGAGGTCATCTCGAAGCCTCAGGAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCCAACAGCCAGCCCGTTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VMLRSSRSLRKYCCS*TSDSSSNSQPVPSS
Trigger: GGAGGAGGGAACGGGCTGGCTGTTGGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTTCCTGAGGCTTCGAGATGACCTCAACATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000124585.2
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGGCAGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCTTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: RQLPVLPSQGWERPTSWGFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...GCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACGTCCCACCTCTTGGGGCACTGAGGGCTGAACCAAGGTGTGCAGAACAGTTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: GNVPPLGALRAEPRCAEQFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...CTGTTCTGCACACCTTGGTTCAGCCCTCAGTGCCCCAAGAGGTGGGACGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PVGCWLALLCGQHILLVHSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GTCACGACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCAAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VTTFRGKGPTHRVRVFCPSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...TGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137044.3
ENSMUST00000238799.2
CDS-3UTR CAA 90 bp GGTCACGACATTTCGAGGGAAGGGTCCTACACACAGGGTCCGCGTATTCTGCCCCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: GHDISREGSYTQGPRILPHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...GGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137044.3
CDS-3UTR CAA 90 bp TGTCAGTCTAATCCCCCAGAGGAAAGCCTGGGGCACACTCTAGCCACCAGCCCACACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: CQSNPPEESLGHTLATSPHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...TGGGCTGGTGGCTAGAGTGTGCCCCAGGCTTTCCTCTGGGGGATTAGACTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWLRPSL*KSLDRG
Trigger: CCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAG...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTALCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGGTGGCACCTGGGGCTaGTCATCACCTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRGGTWG*SSPPGV
Trigger: GACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: QVHSEATGHILSNTPHSYVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTGTCCAGGCCACCGGCTaGTCTCTTCCTCACCCGAGG +
Preference number: 5 (lower is better)
Translates to: HKFTVKLQVTFCPTLHTPVQATG*SLPHPR
Trigger: CCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGAC...AGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: LATEADGNTSDSNRGGTGGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp AGCTTCCTGTCTTGCCTTCACAAGGCTGGGAACGTCCCACCTCTTGGGGCACTGCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SFLSCLHKAGNVPPLGALPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...CAGTGCCCCAAGAGGTGGGACGTTCCCAGCCTTGTGAAGGCAAGACAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCAGCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWCSIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCA...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR CAA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCTCCACCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: THQIATGEEQVKQESTGASTIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGA...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS GCA 90 bp AGCACCACACCATACAAGCGAATGAGGTTTCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGGATGAAGTCGTCCATGGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: STTPYKRMRFRWSSE*MALTSRMKSSMASG
Trigger: GCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCGCTTGTATGGTGTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCTGTTGGTTGCTGGCTCGCCCTGCTGTGTGGCCAACACATCCTTCTTGTCCATCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: PVGCWLALLCGQHILLVHHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...ATGGACAAGAAGGATGTGTTGGCCACACAGCAGGGCGAGCCAGCAACCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LATEADGNTSDSNRGGTGDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SFLSMSSLASCQSNPPEEDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACTGCAGCATCTGGACCTaGTCTGCTGGCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QVHSEATGHILSNTPHSYCSIWT*SAGRAA
Trigger: GGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCA...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000238856.2
CDS-3UTR CAA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTGATAGGCGGGTAATGTaGAGGTCATCTCGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTADRRVM*RSSRSL
Trigger: GAGGCTTCGAGATGACCTCAACATTACCCGCCTATC...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SIAGATTLATEADGNTSDIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGATCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QIATGEEQVKQESTGATGSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHLCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGCTCTGTGGTGGTGTCTaGTCCAGCAAGGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWLCGGV*SSKEQA
Trigger: TGCCTGCTCCTTGCTGGACAAGACACCACCACAGAG...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCACTGGGCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QIATGEEQVKQESTGATGPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...CCCAGTGGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: ALFLWKKQISIAGATTLAGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGGGGGCTTGGGGTCCTaGAACCTTGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRGGLGS*NLEETE
Trigger: CTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: QRLMGTHQIATGEEQVKQLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...CTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCCAGTCAACCTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: HRQVQEVLLGQTTALQSTLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...GGTTGACTGGAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCCGTGCCCCTGGGTaGCTGTTATTGGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRGRAPG*LLLVEK
Trigger: CTTCTCCACCAATAACAGCAACCCAGGGGCACGGCC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 90 bp ATGGGTAGTGTGAGCACCACACCATACAAGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCATTGACCTCCCGGATGAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: MGSVSTTPYKRMRFR*SSECMALTSRMKSS
Trigger: GGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCGCTTGTATGGTGTGGTGCTCACACTACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAAGATAGGCGGGTAATGTaGAGGTCATCTCGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: RLWQQRLMGTHQIATGEEDRRVM*RSSRSL
Trigger: GAGGCTTCGAGATGACCTCAACATTACCCGCCTATC...TTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SIAGATTLATEADGNTSDLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCTCTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLSHRQVQEVLLGQTTALLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...GAGAGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATCAGGCTTCAGGCACTaGACGGCCACACTCACCGTC +
Preference number: 5 (lower is better)
Translates to: LFLWKKQISIAGATTLATSGFRH*TATLTV
Trigger: GACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGA...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCTTCTTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SFLSMSSLASCQSNPPEESECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...TTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: SIAGATTLATEADGNTSDHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAGACATTGTAGATGTCTaGAGGGCAGTCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRDIVDV*RAVLRP
Trigger: CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTC...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GACCAGCCAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: DQPSPQVHSEATGHILSNPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...GTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTGGCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGGCAACAGAGGCTGATGGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LATEADGNTSDSNRGGTGPTSVL*MEQTSK
Trigger: CTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGG...ACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACTTATTGGTGGAGAAGTaGGCCTTTGGGTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHLLVEK*AFGSGA
Trigger: CGCCCCAGACCCAAAGGCCAACTTCTCCACCAATAA...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CCACCCTTGTCCCACAGACAGGTTCAAGAGGTTCTTTTAGGGCAGACCACTGCTCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: PPLSHRQVQEVLLGQTTAPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...AGCAGTGGTCTGCCCTAAAAGAACCTCTTGAACCTGTCTGTGGGACAAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTGTCCATGTCAAGCCTGGCTTCCTGTCAGTCTAATCCCCCAGAGGAAAGCCTGCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LSMSSLASCQSNPPEESLPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...CAGGCTTTCCTCTGGGGGATTAGACTGACAGGAAGCCAGGCTTGACATGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATAGCCCTGGGTTGCTGTTATaGGTGGAGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: IAGATTLATEADGNTSDSPGLLL*VEKLAF
Trigger: AAAGGCCAACTTCTCCACCAATAACAGCAACCCAGG...GCTATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: THQIATGEEQVKQESTGAIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TCCATAGCTGGGGCCACGACTTTGGCAACAGAGGCTGATGGGAACACATCAGATTTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: SIAGATTLATEADGNTSDFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...ATCTGATGTGTTCCCATCAGCCTCTGTTGCCAAAGTCGTGGCCCCAGCTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: THQIATGEEQVKQESTGASECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAGAAGGCGCTCCCCTTCCTaGTCGATCTTATGCAGGATC +
Preference number: 5 (lower is better)
Translates to: ISLEEADIHSWGHDFGNRRRSPS*SILCRI
Trigger: GATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCT...TCTGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAGATAGGCGGGTAATGTaGAGGTCATCTCGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: ALFLWKKQISIAGATTLADRRVM*RSSRSL
Trigger: GAGGCTTCGAGATGACCTCAACATTACCCGCCTATC...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QVHSEATGHILSNTPHSYIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACACTCCTACAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QVHSEATGHILSNTPHSYSECMA*TSRMKS
Trigger: CGACTTCATCCGGGAGGTCAATGCCATGCATTCACT...GTAGGAGTGTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp ACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTGCCCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: THQIATGEEQVKQESTGAHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...GGCACCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACAATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LFLWKKQISIAGATTLATIHDLR*HMAFLL
Trigger: GAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGAT...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp CAAGCCCACAAGTTCACAGTGAAGCTACAGGTCACATTCTGTCCAACACTCCACTTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: QAHKFTVKLQVTFCPTLHFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...GTGGAGTGTTGGACAGAATGTGACCTGTAGCTTCACTGTGAACTTGTGGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GGGAACACATCAGATAGCAACAGGGGAGGAACAGGTCAAACAGGAAAGTACTGGTTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: GNTSDSNRGGTGQTGKYWFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...CCAGTACTTTCCTGTTTGACCTGTTCCTCCCCTGTTGCTATCTGATGTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACATTGCTCATCCATGACTaGCGTTTGCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LFLWKKQISIAGATTLATLLIHD*RLHMAF
Trigger: GAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAA...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp GCTTTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCATTTCCACTGAACACCTaGCTCATCCATGACTTGCGT +
Preference number: 5 (lower is better)
Translates to: ALFLWKKQISIAGATTLAFPLNT*LIHDLR
Trigger: ACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA...TGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS-3UTR CAA 90 bp TTATTTCTCTGGAAGAAGCAGATATCCATAGCTGGGGCCACGACTTTGGCAACACACCTTGCGGTGTTCTaGCATGACATAGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: LFLWKKQISIAGATTLATHLAVF*HDIVVI
Trigger: GATGACCACTATGTCATGCAAGAACACCGCAAGGTG...TGTTGCCAAAGTCGTGGCCCCAGCTATGGATATCTGCTTCTTCCAGAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp GCCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: AIWTLSAGRAAS*PSPGQPLCGSR
Trigger: TCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS GCA 72 bp GCTCCAACAGCCAGCCCGTTCCCTCCTCCGGCTGCATaGTGCTGCTCCCCAGCCTCTGCTGTCCCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: APTASPFPPPAA*CCSPASAVPPR
Trigger: GCGAGGAGGGACAGCAGAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238891.2
CDS CAA 72 bp GGTCTGCCTTGGTGCCTGGCACTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAGGCAGGGCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: GLPWCLALGLRA*PATALEAGLAS
Trigger: GGAAGCCAGCCCTGCCTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 90 bp CACTGCTGCGGTCTGCCTTGGTGCCTGGCACTCGGGCTGAGGGCTTaGCCAGCCACAGCCCTCGAGGCAGGGCTGGCTTCCTCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: HCCGLPWCLALGLRA*PATALEAGLASSGQ
Trigger: TTGGCCTGAGGAAGCCAGCCCTGCCTCGAGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp ACCATCTGGACCTTGTCTGCTGGCCGAGCAGCCTCTTaGCCGTCCCCTGGGCAGCCCCTCTGTGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: TIWTLSAGRAAS*PSPGQPLCGSR
Trigger: TCGGCTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS GCA 72 bp CCAACAGCCAGCCCGTTCCCTCCTCCGGCTGCATGCTaGTGCTCCCCAGCCTTGTGTACAGCCGTCGCCGCA +
Preference number: 6 (lower is better)
Translates to: PTASPFPPPAAC*CSPALCTAVAA
Trigger: TGCGGCGACGGCTGTACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 72 bp GCCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTaGACGGCCACACTCACCGTCTTCCCTGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: ASGWLSTSGFRH*TATLTVFPAGA
Trigger: CGCCCCCGCAGGGAAGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp CCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTTaGCGGCCACACTCACCGTCTTCCCTGCGGGGGCGT +
Preference number: 6 (lower is better)
Translates to: PLAGSARQASGT*RPHSPSSLRGR
Trigger: ACGCCCCCGCAGGGAAGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp GGTCACCCCATGCACCATGGCCATCTGGACCTTGTCTaGTGGCCGAGCAGCCTCTTGCCCGTCCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GHPMHHGHLDLV*WPSSLLPVPWA
Trigger: TGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGCCATGGTGCATGGGGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS CCA 72 bp GCAGTCTGCACTGAGCTGGGCGGCTTGCCTCCGCCCTaGGGTGGAAGGAACAGGTTATCCTCCAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: AVCTELGGLPPP*GGRNRLSSRAG
Trigger: CCCTGCCCTGGAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp CCCAAAGAGCTGCTCCACCATCTGGACCTTGTCTGCTaGCCGAGCAGCCTCTTGCCCGTCCCCTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: PKELLHHLDLVC*PSSLLPVPWAA
Trigger: GGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGAGCAGCTCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS CAA 72 bp TTCCCTCCTCCGGCTGCATGCTGCTGCTCCCCAGCCTaGTGTACAGCCGTCGCCGCAGTCTGGCCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: FPPPAACCCSPA*CTAVAAVWPGE
Trigger: CTCTCCTGGCCAGACTGCGGCGACGGCTGTACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 90 bp AGCCACAGCCCTCGAGGCAGGGCTGGCTTCCTCAGGCCAAGCCTCTaGAAGTCGCTGGACAGGGGGTCTGGGTCCTCACTCACAGGGTCG +
Preference number: 6 (lower is better)
Translates to: SHSPRGRAGFLRPSL*KSLDRGSGSSLTGS
Trigger: CGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCAGCCCTGCCTCGAGGGCTGTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 90 bp CCGAAGTCGATGAGTGTGACCTCACCCCCACTGCTGCGGTCTGCCTaGGTGCCTGGCACTCGGGCTGAGGGCTTTGCCAGCCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: PKSMSVTSPPLLRSA*VPGTRAEGFASHSP
Trigger: AGGGCTGTGGCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGGGGTGAGGTCACACTCATCGACTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp CAGCCCAAAGAGCTGCTCCACCATCTGGACCTTGTCTaGTGGCCGAGCAGCCTCTTGCCCGTCCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: QPKELLHHLDLV*WPSSLLPVPWA
Trigger: TGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGGTGGAGCAGCTCTTTGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115125.8
ENSMUST00000238806.2
ENSMUST00000238891.2
CDS GCA 72 bp AGCAGCTCCAACAGCCAGCCCGTTCCCTCCTCCGGCTaGATGCTGCTGCTCCCCAGCCTTGTGTACAGCCGT +
Preference number: 6 (lower is better)
Translates to: SSSNSQPVPSSG*MLLLPSLVYSR
Trigger: ACGGCTGTACACAAGGCTGGGGAGCAGCAGCATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGGAGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 72 bp ATGAGTGTGACCTCACCCCCACTGCTGCGGTCTGCCTaGGTGCCTGGCACTCGGGCTGAGGGCTTTGCCAGC +
Preference number: 6 (lower is better)
Translates to: MSVTSPPLLRSA*VPGTRAEGFAS
Trigger: GCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGGGGTGAGGTCACACTCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp CTTGTCCAGCAAGGAGCAGGCATCCATGGCCAACTGTaGCAAGGAGGGTGCACAGGGCCGAGGGGTTGGGAC +
Preference number: 6 (lower is better)
Translates to: LVQQGAGIHGQL*QGGCTGPRGWD
Trigger: GTCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp CAGGGGTGGGGTGTAAAGGTCGTGGCAGTGCCCGTGTaGGGCTCTGTGGTGGTGTCTTGTCCAGCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: QGWGVKVVAVPV*GSVVVSCPARS
Trigger: GCTCCTTGCTGGACAAGACACCACCACAGAGCCCCACACGGGCACTGCCACGACCTTTACACCCCACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp AGCTGTGGCTCTGCAGGGCCGCCTGGCACTCCTCTGTaGTCACCCCATGCACCATGGCCATCTGGACCTTGT +
Preference number: 6 (lower is better)
Translates to: SCGSAGPPGTPL*SPHAPWPSGPC
Trigger: ACAAGGTCCAGATGGCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115126.9
CDS CAA 90 bp AGTCGCTGGACAGGGGGTCTGGGTCCTCACTCACAGGGTCGTATGTaGGCTTTTTCACCCGTCCTAGGTGCTGGGTGGGTCGGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SRWTGGLGPHSQGRM*AFSPVLGAGWVGRC
Trigger: GCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CCA 72 bp TTGACCTCCCGGATGAAGTCGTCCATGGCCTCTGGCTaGCTCAGCACGTCAGGCTTCAGGCACTTGACGGCC +
Preference number: 6 (lower is better)
Translates to: LTSRMKSSMASG*LSTSGFRHLTA
Trigger: GGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp GTGGTGGTGTCTTGTCCAGCAAGGAGCAGGCATCCATaGCCAACTGTGCCAAGGAGGGTGCACAGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: VVVSCPARSRHP*PTVPRRVHRAE
Trigger: CTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGACAAGACACCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp GTGGAGGCTCCCTTTTCACCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTTCCACACTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: VEAPFSPVLGAG*VGRCSVPHSAG
Trigger: ACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAGGGAGCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115121.9
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS CAA 90 bp CCTTGGCTAGGCCCAGCAGGGAGGCCTGCACCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAGTCATCCTCATCCTGGGCCACGTCG +
Preference number: 6 (lower is better)
Translates to: PWLGPAGRPAPTSVL*MEQTSKSSSSWATS
Trigger: CGACGTGGCCCAGGATGAGGATGACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGGTGCAGGCCTCCCTGCTGGGCCTAGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp TTTTCACCCGTCCTAGGTGCTGGGTGGGTCGGGAGGTaGTCAGTTCCACACTCAGCAGGTCAGGAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: FSPVLGAGWVGR*SVPHSAGQEGP
Trigger: TGGACCCTCCTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115122.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp GGCATTGACCTCCCGGATGAAGTCGTCCATGGCCTCTaGCTGGCTCAGCACGTCAGGCTTCAGGCACTTGAC +
Preference number: 6 (lower is better)
Translates to: GIDLPDEVVHGL*LAQHVRLQALD
Trigger: GTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp GCCCAGCAGGGAGGCCTGCACCTACTAGCGTGCTGTTaGTGGAGCAGACCTCAAAGTCATCCTCATCCTGGG +
Preference number: 6 (lower is better)
Translates to: AQQGGLHLLACC*WSRPQSHPHPG
Trigger: CCCAGGATGAGGATGACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGGTGCAGGCCTCCCTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp CCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTTaGCGGCCACACTCACCTTGCTCATCCATGACTTGC +
Preference number: 6 (lower is better)
Translates to: PLAGSARQASGT*RPHSPCSSMTC
Trigger: GCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CCA 72 bp CAGGCCAAGCCTCTTGAAGTCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTCGTATGTTGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: QAKPLEVAGQGV*VLTHRVVCWLL
Trigger: CAGAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000115121.9
ENSMUST00000115124.9
ENSMUST00000238891.2
CDS CCA 72 bp CACTCACCTTGCTCATCCATGACTTGCGTTTGCACATaGCCTTCCTCCTCTTCACGGCCTCCCACAGCCGCC +
Preference number: 6 (lower is better)
Translates to: HSPCSSMTCVCT*PSSSSRPPTAA
Trigger: GGCGGCTGTGGGAGGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CAA 72 bp ACAGGGGGTCTGGGTCCTCACTCACAGGGTCGTATGTaGGCTTTTTCACCCGTCCTAGGTGCTGGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: TGGLGPHSQGRM*AFSPVLGAGWV
Trigger: GACCCACCCAGCACCTAGGACGGGTGAAAAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 72 bp GGCCCAGCAGGGAGGCCTGCACCTACTAGCGTGCTGTaGATGGAGCAGACCTCAAAGTCATCCTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: GPAGRPAPTSVL*MEQTSKSSSSW
Trigger: CCAGGATGAGGATGACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGGTGCAGGCCTCCCTGCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp TGGAAAATCTCTGCAGTCTGCACTGAGCTGGGCGGCTaGCCTCCGCCCTGGGGTGGAAGGAACAGGTTATCC +
Preference number: 6 (lower is better)
Translates to: WKISAVCTELGG*PPPWGGRNRLS
Trigger: GGATAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp GCCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTaGACGGCCACACTCACCTTGCTCATCCATGACTTG +
Preference number: 6 (lower is better)
Translates to: ASGWLSTSGFRH*TATLTLLIHDL
Trigger: CAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CAA 90 bp TCGTCCATGGCCTCTGGCTGGCTCAGCACGTCAGGCTTCAGGCACTaGACGGCCACACTCACCTTGCTCATCCATGACTTGCGTTTGCAC +
Preference number: 6 (lower is better)
Translates to: SSMASGWLSTSGFRH*TATLTLLIHDLRLH
Trigger: GTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACGTGCTGAGCCAGCCAGAGGCCATGGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CAA 90 bp CAGGCTCTCAGGGGCACACCAGGCAAAGGGCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATCATTCTGGGGCAGAGCTCGCATCAG +
Preference number: 6 (lower is better)
Translates to: QALRGTPGKGHLAVF*HDIVVIILGQSSHQ
Trigger: CTGATGCGAGCTCTGCCCCAGAATGATGACCACTATGTCATGCAAGAACACCGCAAGGTGCCCTTTGCCTGGTGTGCCCCTGAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp CCAGTGGGGACCTGTAGCTGCCGCATACACTCCTGCTaGAGTGCCTGGAAAATCTCTGCAGTCTGCACTGAG +
Preference number: 6 (lower is better)
Translates to: PVGTCSCRIHSC*SAWKISAVCTE
Trigger: CTCAGTGCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCAGCTACAGGTCCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp TGGCCAGTGGGGACCTGTAGCTGCCGCATACACTCCTaGTGCAGTGCCTGGAAAATCTCTGCAGTCTGCACT +
Preference number: 6 (lower is better)
Translates to: WPVGTCSCRIHS*CSAWKISAVCT
Trigger: AGTGCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCAGCTACAGGTCCCCACTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000115120.9
ENSMUST00000115121.9
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp CGGCCACACTCACCTTGCTCATCCATGACTTGCGTTTaGACATGGCCTTCCTCCTCTTCACGGCCTCCCACA +
Preference number: 6 (lower is better)
Translates to: RPHSPCSSMTCV*TWPSSSSRPPT
Trigger: TGTGGGAGGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CCA 72 bp CGTATGTTGGCTTTTTCACCCGTCCTAGGTGCTGGGTaGGTCGGGAGGTGCTCAGTTCCACACTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: RMLAFSPVLGAG*VGRCSVPHSAG
Trigger: ACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAAGCCAACATACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 72 bp ACGGCCACACTCACCTTGCTCATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTCTTCACGGCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: TATLTLLIHDLR*HMAFLLFTASH
Trigger: GTGGGAGGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CCA 72 bp CAGGCCAAGCCTCTTGAAGTCGCTGGACAGGGGGTCTaGGTCCTCACTCACAGGGTCGTATGTTGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: QAKPLEVAGQGV*VLTHRVVCWLF
Trigger: AAAAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000115120.9
ENSMUST00000115123.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000131238.8
ENSMUST00000152361.4
ENSMUST00000238806.2
ENSMUST00000238856.2
CDS CAA 72 bp AGGGGCACACCAGGCAAAGGGCACCTTGCGGTGTTCTaGCATGACATAGTGGTCATCATTCTGGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RGTPGKGHLAVF*HDIVVIILGQS
Trigger: GCTCTGCCCCAGAATGATGACCACTATGTCATGCAAGAACACCGCAAGGTGCCCTTTGCCTGGTGTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp CACTTGACGGCCACACTCACCTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTCCTCCTCTTCACGGCC +
Preference number: 6 (lower is better)
Translates to: HLTATLTLLIHD*RLHMAFLLFTA
Trigger: GGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS CAA 90 bp CCATACAAGCGAATGAGGTTTCGGTGGTCTAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCGTCCATGGCCTCTGGCTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PYKRMRFRWSSECMA*TSRMKSSMASGWLS
Trigger: GCTGAGCCAGCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCGCTTGTATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp GCTGGGAAGGGAACTCGGCCTCCAACCGCTTTCCACTaGACACCTTGCTCATCCATGACTTGCGTTTGCACA +
Preference number: 6 (lower is better)
Translates to: AGKGTRPPTAFH*TPCSSMTCVCT
Trigger: TGTGCAAACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAAGCGGTTGGAGGCCGAGTTCCCTTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp CACACCAGGCAAAGGGCACCTTGCGGTGTTCTTGCATaGCATAGTGGTCATCATTCTGGGGCAGAGCTCGCA +
Preference number: 6 (lower is better)
Translates to: HTRQRAPCGVLA*HSGHHSGAELA
Trigger: TGCGAGCTCTGCCCCAGAATGATGACCACTATGTCATGCAAGAACACCGCAAGGTGCCCTTTGCCTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp CAGGCACTTGACGGCCACACTCACCTTGCTCATCCATaGCTTGCGTTTGCACATGGCCTTCCTCCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: QALDGHTHLAHP*LAFAHGLPPLH
Trigger: GTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGAGTGTGGCCGTCAAGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156614.3
CDS GCA 72 bp AGGTCATCTCGAAGCCTCAGGAAATACTGTTGTAGCTaGACCTCGGACAGCAGCTCCAACAGCCAGCCCGTT +
Preference number: 6 (lower is better)
Translates to: RSSRSLRKYCCS*TSDSSSNSQPV
Trigger: AACGGGCTGGCTGTTGGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTTCCTGAGGCTTCGAGATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000124585.2
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000156614.3
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp CGAATGAGGTTTCGGTGGTCTAGTGAATGCATGGCATaGACCTCCCGGATGAAGTCGTCCATGGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: RMRFRWSSECMA*TSRMKSSMASG
Trigger: GCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp TTTCCACTGAACACCTTGCTCATCCATGACTTGCGTTaGCACATGGCCTTCCTCCTCTTCACGGCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: FPLNTLLIHDLR*HMAFLLFTASH
Trigger: GTGGGAGGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CAA 72 bp AACCGCTTTCCACTGAACACCTTGCTCATCCATGACTaGCGTTTGCACATGGCCTTCCTCCTCTTCACGGCC +
Preference number: 6 (lower is better)
Translates to: NRFPLNTLLIHD*RLHMAFLLFTA
Trigger: GGCCGTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS TCA 72 bp CTCCAACCGCTTTCCACTGAACACCTTGCTCATCCATaGCTTGCGTTTGCACATGGCCTTCCTCCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: LQPLSTEHLAHP*LAFAHGLPPLH
Trigger: GTGAAGAGGAGGAAGGCCATGTGCAAACGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAAGCGGTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000145627.8
ENSMUST00000150383.8
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS CCA 72 bp GTGAGCACCACACCATACAAGCGAATGAGGTTTCGGTaGTCTAGTGAATGCATGGCATTGACCTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: VSTTPYKRMRFR*SSECMALTSRM
Trigger: CATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCGCTTGTATGGTGTGGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2
CDS GCA 72 bp CCATACAAGCGAATGAGGTTTCGGTGGTCTAGTGAATaGATGGCATTGACCTCCCGGATGAAGTCGTCCATG +
Preference number: 6 (lower is better)
Translates to: PYKRMRFRWSSE*MALTSRMKSSM
Trigger: CATGGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCGAAACCTCATTCGCTTGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000115123.9
ENSMUST00000115124.9
ENSMUST00000115125.8
ENSMUST00000115126.9
ENSMUST00000137044.3
ENSMUST00000156614.3
ENSMUST00000238799.2
ENSMUST00000238806.2
ENSMUST00000238856.2
ENSMUST00000238891.2