Pregenerated sensors for TNIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059866Ensembl transcript IDs: ENSMUST00000030991.14, ENSMUST00000087737.10, ENSMUST00000114359.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCTTAGAGCAGCTATGGTaGTCATGGGTCACACGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ATTLERGHTAPTATSPSSLEQLW*SWVTRA Trigger: TGCCCGTGTGACCCATGACCACCATAGCTGCTCTAA...GCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTAAGATGACCTTCCAGTaGCCCTGCCCATTTGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TSVLQGDGTGCSCVALLSKMTFQ*PCPFGP Trigger: GGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTT...ACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGCCCACCTCTTCCTCCTaGTCTGTCAATAGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LQGDGTGCSCVALLSLGRPTSSS*SVNSSL Trigger: GAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGGG...CCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGATGACCTTCCAGTGACCCTGCCCATTTGGGCCCTAGATCCCAGGAGAATGTTAGAGCAGCTATGGTaGTCATGGGTCACACGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QDDLPVTLPIWALDPRRMLEQLW*SWVTRA Trigger: TGCCCGTGTGACCCATGACCACCATAGCTGCTCTAA...CATTCTCCTGGGATCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAAATGAAAACAAGATaGCCTTCCAGTGACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFQMKTR*PSSDPA Trigger: GGCAGGGTCACTGGAAGGTCATCTTGTTTTCATTTG...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTCCCTTAGAGCAGCTATaGTGGTCATGGGTCACACGG | + |
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Preference number: 2 (lower is better) Translates to: TSVLQGDGTGCSCVALLSPLEQL*WSWVTR Trigger: CCGTGTGACCCATGACCACCATAGCTGCTCTAAGGG...ACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGTTCTAGTGTATCCCTTAGAGCAGCTATaGTGGTCATGGGTCACACGG | + |
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Preference number: 2 (lower is better) Translates to: WYWMQLCGSAEFGKVLVYPLEQL*WSWVTR Trigger: CCGTGTGACCCATGACCACCATAGCTGCTCTAAGGG...ATACACTAGAACCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCCACAACTGATAGCTTaGAGCTTTGAATTGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFPQLIA*SFELTA Trigger: AGCTGTCAATTCAAAGCTGCAAGCTATCAGTTGTGG...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGTTCTAGTGTATTGCAACACACTGAGTTaGAAACTGAGTCTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: WYWMQLCGSAEFGKVLVYCNTLS*KLSLRT Trigger: GGTCCTCAGACTCAGTTTTCAACTCAGTGTGTTGCA...ATACACTAGAACCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAACTTGCAGCTTTGAATTaGCAGCTCACTCCAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: TSQGVYLTTQQDGATTLELAALN*QLTPNS Trigger: AGAGTTTGGAGTGAGCTGTCAATTCAAAGCTGCAAG...TTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGACCACAACTGATAGCTTaGAGCTTTGAATTGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGPQLIA*SFELTA Trigger: AGCTGTCAATTCAAAGCTGCAAGCTATCAGTTGTGG...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTTTAGAGCAGCTATGGTaGTCATGGGTCACACGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FGNTSVLQGDGTGCSCVALEQLW*SWVTRA Trigger: TGCCCGTGTGACCCATGACCACCATAGCTGCTCTAA...AGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTCTTGCAGCTTTGAATTaGCAGCTCACTCCAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VYLTTQQDGATTLERGHTLAALN*QLTPNS Trigger: AGAGTTTGGAGTGAGCTGTCAATTCAAAGCTGCAAG...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGTGTATCATGTAACTGTAATGCAGCACAGACCAGTCAGGGAGTGTATCCCCACCTCTTCCTCCTaGTCTGTCAATAGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VLVYHVTVMQHRPVRECIPTSSS*SVNSSL Trigger: GAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGGG...GATACACTCCCTGACTGGTCTGTGCTGCATTACAGTTACATGATACACTAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACAGACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACTGGCATAACTCTAGGTaGAAGCAGGCTTCAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: STDQSGSVSHYSTGWSYHWHNSR*KQASEY Trigger: ATATTCTGAAGCCTGCTTGCACCTAGAGTTATGCCA...GTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTCTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGGATAGCTTGCAGCTTTaGATTGACAGCTCACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLLEIQVFCRVMVLDAAVDSLQL*IDSSLQ Trigger: TTGGAGTGAGCTGTCAATTCAAAGCTGCAAGCTATC...CACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATTCCCCTTCCAGCAAGTaGCATAACTCTAGGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KVLSLLEIQVFCRVMVLDSPSSK*HNSRCK Trigger: CTTGCACCTAGAGTTATGCCACTTGCTGGAAGGGGA...ATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTCAAATGAAAACAAGATGTGCAACACACTGAGTTaGAAACTGAGTCTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: LSIVPSDQVSPWSNENKMCNTLS*KLSLRT Trigger: GGTCCTCAGACTCAGTTTTCAACTCAGTGTGTTGCA...CATCTTGTTTTCATTTGACCATGGTGAGACTTGGTCAGAGGGAACTATTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGATAGCTTGCAGCTTTaGATTGACAGCTCACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSLLEIQVFCRVMVLDAADSLQL*IDSSLQ Trigger: TTGGAGTGAGCTGTCAATTCAAAGCTGCAAGCTATC...AGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTCCCACCTCTTCCTCCTaGTCTGTCAATAGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: NKGAFPFGNTSVLQGDGTPTSSS*SVNSSL Trigger: GAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGGG...AGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTTGGCATAACTCTAGGTaGAAGCAGGCTTCAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: FGNTSVLQGDGTGCSCVAWHNSR*KQASEY Trigger: ATATTCTGAAGCCTGCTTGCACCTAGAGTTATGCCA...AGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATCTTGCAGCTTTGAATTaGCAGCTCACTCCAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: KVLSLLEIQVFCRVMVLDLAALN*QLTPNS Trigger: AGAGTTTGGAGTGAGCTGTCAATTCAAAGCTGCAAG...ATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTTGCAACACACTGAGTTaGAAACTGAGTCTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: NKGAFPFGNTSVLQGDGTCNTLS*KLSLRT Trigger: GGTCCTCAGACTCAGTTTTCAACTCAGTGTGTTGCA...AGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATAAAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTAGATAGCTTGCAGCTTTaGATTGACAGCTCACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: EIKVLSLLEIQVFCRVMVDSLQL*IDSSLQ Trigger: TTGGAGTGAGCTGTCAATTCAAAGCTGCAAGCTATC...TACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTTTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| 3UTR GCA 72 bp | ACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTaGTCCCACAGCAACTTCCCCTTCCAGCAAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TGWSYHPGKRTH*SHSNFPFQQVA Trigger: TGCCACTTGCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR CCA 72 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATaGAGCTACCACCCTGGAAAGAGGACACACTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: DQSGSVSHYSTG*SYHPGKRTHCS Trigger: GGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR CCA 72 bp | CACACTGCTCCCACAGCAACTTCCCCTTCCAGCAAGTaGCATAACTCTAGGTGCAAGCAGGCTTCAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: HTAPTATSPSSK*HNSRCKQASEY Trigger: ATATTCTGAAGCCTGCTTGCACCTAGAGTTATGCCACTTGCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR TCA 72 bp | CTGACCAAGTCTCACCATGGTCAAATGAAAACAAGATaGCCTTCCAGTGACCCTGCCCATTTGGGCCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LTKSHHGQMKTR*PSSDPAHLGPR Trigger: TCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTGTTTTCATTTGACCATGGTGAGACTTGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR GCA 72 bp | GGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATaGAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GNTSVLQGDGTG*SCVALLSLGRF Trigger: GAACCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR TCA 72 bp | AGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTaGGTTTGGGAAGGTTCTAGTGTATCATGTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: RVMVLDAAVWLC*VWEGSSVSCNC Trigger: ACAGTTACATGATACACTAGAACCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| 3UTR GCA 72 bp | CAAGCAGGCTTCAGAATATTCCCACAACTGATAGCTTaGAGCTTTGAATTGACAGCTCACTCCAAACTCTAC | + |
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Preference number: 3 (lower is better) Translates to: QAGFRIFPQLIA*SFELTAHSKLY Trigger: GTAGAGTTTGGAGTGAGCTGTCAATTCAAAGCTGCAAGCTATCAGTTGTGGGAATATTCTGAAGCCTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CCA 90 bp | GCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCAATCCGACAGGGTCCTaGCTCCCGGGAGTCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ATTLERGHTAPTATSPSSNPTGS*LPGVLS Trigger: AGACAGGACTCCCGGGAGCCAGGACCCTGTCGGATT...GCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CCA 90 bp | CCACCTCTTCCTCCTGCTCTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTGCTGGCCGGCCTCGTaGTACAGGCCACAGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PPLPPALSIVPSDQVSPWCWPAS*YRPQSA Trigger: AGCGCTCTGTGGCCTGTACCACGAGGCCGGCCAGCA...CCATGGTGAGACTTGGTCAGAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CCA 90 bp | CAAGATGACCTTCCAGTGACCCTGCCCATTTGGGCCCTAGATCCCAGGAGAATGGGCACATGTGGGCAGTaGCTGCCAATGTCCTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QDDLPVTLPIWALDPRRMGTCGQ*LPMSCA Trigger: TGCGCAGGACATTGGCAGCCACTGCCCACATGTGCC...CATTCTCCTGGGATCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCCCGGGACATCCTCATaGCTGTCAGCTCCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFPGTSS*LSAPGL Trigger: CAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGG...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS-3UTR CCA 90 bp | CAAGATGACCTTCCAGTGACCCTGCCCATTTGGGCCCTAGATCCCAGGAGAATGAATCCGACAGGGTCCTaGCTCCCGGGAGTCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: QDDLPVTLPIWALDPRRMNPTGS*LPGVLS Trigger: AGACAGGACTCCCGGGAGCCAGGACCCTGTCGGATT...CATTCTCCTGGGATCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR TCA 90 bp | GCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCTTCTCTTGCTCATGCTaGGGCTGGCTCATCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ATTLERGHTAPTATSPSSFSCSC*GWLISC Trigger: ACAGCTGATGAGCCAGCCTCAGCATGAGCAAGAGAA...GCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGCCGCCAGGGGTCACATaGTCCAGTGCATCCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LQGDGTGCSCVALLSLGRPPGVT*SSASIS Trigger: AGAGATGGATGCACTGGAGCATGTGACCCCTGGCGG...CCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR GCA 90 bp | GACAAAACTGATGTCCACTTGATGTCCCTGACCCCACCTCTTCCTCCTGCTCTGGACCTCTCTGGGCTGTaGACACATGCCCACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: DKTDVHLMSLTPPLPPALDLSGL*THAHPL Trigger: CAGAGGGTGGGCATGTGTGCACAGCCCAGAGAGGTC...CAGAGCAGGAGGAAGAGGTGGGGTCAGGGACATCAAGTGGACATCAGTTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CCA 90 bp | GACAAAACTGATGTCCACTTGATGTCCCTGACCCCACCTCTTCCTCCTGCTCTGAATCCGACAGGGTCCTaGCTCCCGGGAGTCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: DKTDVHLMSLTPPLPPALNPTGS*LPGVLS Trigger: AGACAGGACTCCCGGGAGCCAGGACCCTGTCGGATT...CAGAGCAGGAGGAAGAGGTGGGGTCAGGGACATCAAGTGGACATCAGTTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCTTCTCTTGCTCATGCTaGGGCTGGCTCATCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFFSCSC*GWLISC Trigger: ACAGCTGATGAGCCAGCCTCAGCATGAGCAAGAGAA...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR TCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAACTCAGACAGGTGCCTaGGGAATGCCTCGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGTQTGA*GMPRLA Trigger: AGCAAGGCGAGGCATTCCTCAGGCACCTGTCTGAGT...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR GCA 90 bp | AGCACAGACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACGACCTCTCTGGGCTGTaGACACATGCCCACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STDQSGSVSHYSTGWSYHDLSGL*THAHPL Trigger: CAGAGGGTGGGCATGTGTGCACAGCCCAGAGAGGTC...GTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | GACAAAACTGATGTCCACTTGATGTCCCTGACCCCACCTCTTCCTCCTGCTCTGCAGCACTCAGACAGGTaGCTGAGGAATGCCTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKTDVHLMSLTPPLPPALQHSDR*LRNASP Trigger: AGGCGAGGCATTCCTCAGGCACCTGTCTGAGTGCTG...CAGAGCAGGAGGAAGAGGTGGGGTCAGGGACATCAAGTGGACATCAGTTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGACAGCACTCAGACAGGTaGCTGAGGAATGCCTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGQHSDR*LRNASP Trigger: AGGCGAGGCATTCCTCAGGCACCTGTCTGAGTGCTG...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCGGCCAGAAGCATCGCTaGTTGTTTGCTCTAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFGQKHR*LFALAQ Trigger: CTGAGCTAGAGCAAACAAGCAGCGATGCTTCTGGCC...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGACATCACTGGCGGCCCTaGCTTTCTCCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGHHWRP*LSPSLP Trigger: TGGCAGAGAAGGAGAAAGCCAGGGCCGCCAGTGATG...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAGACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACGGCACATGTGGGCAGTaGCTGCCAATGTCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: STDQSGSVSHYSTGWSYHGTCGQ*LPMSCA Trigger: TGCGCAGGACATTGGCAGCCACTGCCCACATGTGCC...GTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCTTTTCCTCCAGCTCTTaGATCCTACTGTGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFFSSSS*ILLCAR Trigger: ACGAGCGCACAGTAGGATTCAAGAGCTGGAGGAAAA...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTACTCAGACAGGTGCCTaGGGAATGCCTCGCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLQGDGTGCSCVALLSTQTGA*GMPRLA Trigger: AGCAAGGCGAGGCATTCCTCAGGCACCTGTCTGAGT...ACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | TGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGTTCTAGTGTATGACCTCTCTGGGCTGTaGACACATGCCCACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WYWMQLCGSAEFGKVLVYDLSGL*THAHPL Trigger: CAGAGGGTGGGCATGTGTGCACAGCCCAGAGAGGTC...ATACACTAGAACCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | TACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCAAGGCCAGAAGCATCGCTaGTTGTTTGCTCTAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHPGKRTHCSHSNFPFQQGQKHR*LFALAQ Trigger: CTGAGCTAGAGCAAACAAGCAGCGATGCTTCTGGCC...TTGCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGCTGGCCGGCCTCGTaGTACAGGCCACAGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLEIQVFCRVMVLDAAVCWPAS*YRPQSA Trigger: AGCGCTCTGTGGCCTGTACCACGAGGCCGGCCAGCA...CACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAGACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCATCACTGGCGGCCCTaGCTTTCTCCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STDQSGSVSHYSTGWSYHHHWRP*LSPSLP Trigger: TGGCAGAGAAGGAGAAAGCCAGGGCCGCCAGTGATG...GTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | TACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCAAAATGTCCTGCGCAGTTaGTGGGTCTCATCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YHPGKRTHCSHSNFPFQQNVLRS*WVSSAK Trigger: CTTGGCTGATGAGACCCACCAACTGCGCAGGACATT...TTGCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTGGCACATGTGGGCAGTaGCTGCCAATGTCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYLTTQQDGATTLERGHTGTCGQ*LPMSCA Trigger: TGCGCAGGACATTGGCAGCCACTGCCCACATGTGCC...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTTTGGGAAGGAGATGTTGGCACATGTaGGCAGTGGCTGCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQGDGTGCSCVALLSLGRRCWHM*AVAANV Trigger: GACATTGGCAGCCACTGCCCACATGTGCCAACATCT...CCTTCCCAAACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTCCCGGGACATCCTCATaGCTGTCAGCTCCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLQGDGTGCSCVALLSPGTSS*LSAPGL Trigger: CAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGG...ACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
||
| CDS-3UTR TCA 90 bp | CCACCTCTTCCTCCTGCTCTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTTCTCTTGCTCATGCTaGGGCTGGCTCATCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPPALSIVPSDQVSPWFSCSC*GWLISC Trigger: ACAGCTGATGAGCCAGCCTCAGCATGAGCAAGAGAA...CCATGGTGAGACTTGGTCAGAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTACTCAGACAGGTGCCTaGGGAATGCCTCGCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYLTTQQDGATTLERGHTTQTGA*GMPRLA Trigger: AGCAAGGCGAGGCATTCCTCAGGCACCTGTCTGAGT...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTTGCTGGCCGGCCTCGTaGTACAGGCCACAGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLEIQVFCRVMVLDAACWPAS*YRPQSA Trigger: AGCGCTCTGTGGCCTGTACCACGAGGCCGGCCAGCA...AGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTTCCTCCTGCTCTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGAATGTCCTGCGCAGTTaGTGGGTCTCATCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPPALSIVPSDQVSPWNVLRS*WVSSAK Trigger: CTTGGCTGATGAGACCCACCAACTGCGCAGGACATT...CCATGGTGAGACTTGGTCAGAGGGAACTATTGACAGAGCAGGAGGAAGAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | GACAAAACTGATGTCCACTTGATGTCCCTGACCCCACCTCTTCCTCCTGCTCTGGCTTTTTCAGGTCCTTaGTGTAGGCCTGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DKTDVHLMSLTPPLPPALAFSGP*CRPGHR Trigger: TCTGTGGCCAGGCCTACACCAAGGACCTGAAAAAGC...CAGAGCAGGAGGAAGAGGTGGGGTCAGGGACATCAAGTGGACATCAGTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030991.14 |
||
| CDS-3UTR TCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGATTTTCCTCCAGCTCTTaGATCCTACTGTGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGFSSSS*ILLCAR Trigger: ACGAGCGCACAGTAGGATTCAAGAGCTGGAGGAAAA...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | GATGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTGGTACATCAAGGACATaGTCTTTTCCTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGATTLERGHTAPTATSPGTSRT*SFPPAL Trigger: AAGAGCTGGAGGAAAAGATCATGTCCTTGATGTACC...AGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCTGCTGAGTCACATGCCCACCCTCTaGAGAAGGTTCCATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLQGDGTGCSCVALLSHMPTL*RRFHLL Trigger: CAACAGATGGAACCTTCTGCAGAGGGTGGGCATGTG...ACTCAGCAGAGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGAAGATGTTGGCACATGTaGGCAGTGGCTGCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGVYLTTQQDGATTLERGRCWHM*AVAANV Trigger: GACATTGGCAGCCACTGCCCACATGTGCCAACATCT...TCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGATTTTCCTCCAGCTCTTaGATCCTACTGTGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QGVYLTTQQDGATTLERGFSSSS*ILLCAR Trigger: ACGAGCGCACAGTAGGATTCAAGAGCTGGAGGAAAA...TCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTCCGCCAGGGGTCACATaGTCCAGTGCATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGNTSVLQGDGTGCSCVAPPGVT*SSASIS Trigger: AGAGATGGATGCACTGGAGCATGTGACCCCTGGCGG...AGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | GATGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTTGAGGTCTTCTACATaGGTCACCTTCTGTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGATTLERGHTAPTATSPLRSST*VTFCFN Trigger: GTTAAAACAGAAGGTGACTCATGTAGAAGACCTCAA...AGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
||
| CDS-3UTR TCA 90 bp | GACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAGGTACATCAAGGACATaGTCTTTTCCTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DQSGSVSHYSTGWSYHPGGTSRT*SFPPAL Trigger: AAGAGCTGGAGGAAAAGATCATGTCCTTGATGTACC...TCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTCAGCACTCAGACAGGTaGCTGAGGAATGCCTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLEIQVFCRVMVLDAAQHSDR*LRNASP Trigger: AGGCGAGGCATTCCTCAGGCACCTGTCTGAGTGCTG...AGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | TACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGCAACCATCTCTAAGTACTTaGCAGTTTTGTTCCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YHPGKRTHCSHSNFPFQQPSLST*QFCSPY Trigger: ATACGGGGAACAAAACTGCCAAGTACTTAGAGATGG...TTGCTGGAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | GACAAAACTGATGTCCACTTGATGTCCCTGACCCCACCTCTTCCTCCTGCTCTGATATTCGTCCCTACTTaGATCATAACGCTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DKTDVHLMSLTPPLPPALIFVPT*IITLPL Trigger: AAGTGGCAGCGTTATGATGCAAGTAGGGACGAATAT...CAGAGCAGGAGGAAGAGGTGGGGTCAGGGACATCAAGTGGACATCAGTTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
||
| CDS-3UTR GCA 90 bp | CTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTCAAATGAAAACAAGATGCCGCCAGGGGTCACATaGTCCAGTGCATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIVPSDQVSPWSNENKMPPGVT*SSASIS Trigger: AGAGATGGATGCACTGGAGCATGTGACCCCTGGCGG...CATCTTGTTTTCATTTGACCATGGTGAGACTTGGTCAGAGGGAACTATTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGAGATGTTGGCACATGTaGGCAGTGGCTGCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLEIQVFCRVMVLDAAVRCWHM*AVAANV Trigger: GACATTGGCAGCCACTGCCCACATGTGCCAACATCT...CACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR TCA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTGGTACATCAAGGACATaGTCTTTTCCTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYLTTQQDGATTLERGHTGTSRT*SFPPAL Trigger: AAGAGCTGGAGGAAAAGATCATGTCCTTGATGTACC...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTCACATGCCCACCCTCTaGAGAAGGTTCCATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLEIQVFCRVMVLDAAHMPTL*RRFHLL Trigger: CAACAGATGGAACCTTCTGCAGAGGGTGGGCATGTG...AGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTCAAATGAAAACAAGATGGCATCGCTGCTTGTTTaGTCTAGCCAGCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSIVPSDQVSPWSNENKMASLLV*SSQHPG Trigger: TCCTGGATGCTGGCTAGAGCAAACAAGCAGCGATGC...CATCTTGTTTTCATTTGACCATGGTGAGACTTGGTCAGAGGGAACTATTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030991.14 |
||
| CDS-3UTR TCA 90 bp | TTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTGTGTGGCTTTGAGGTCTTCTACATaGGTCACCTTCTGTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FGNTSVLQGDGTGCSCVALRSST*VTFCFN Trigger: GTTAAAACAGAAGGTGACTCATGTAGAAGACCTCAA...AGCCACACAGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTGGATGCAGCTCCATCTCTAAGTACTTaGCAGTTTTGTTCCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLEIQVFCRVMVLDAAPSLST*QFCSPY Trigger: ATACGGGGAACAAAACTGCCAAGTACTTAGAGATGG...AGCTGCATCCAGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| 3UTR CAA 72 bp | AGAATATTCCCACAACTGATAGCTTGCAGCTTTGAATaGACAGCTCACTCCAAACTCTACGTGAGACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RIFPQLIACSFE*TAHSKLYVRQN Trigger: GTTTTGTCTCACGTAGAGTTTGGAGTGAGCTGTCAATTCAAAGCTGCAAGCTATCAGTTGTGGGAATATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACCATCTCTAAGTACTTaGCAGTTTTGTTCCCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EIKVLSLLEIQVFCRVMVPSLST*QFCSPY Trigger: ATACGGGGAACAAAACTGCCAAGTACTTAGAGATGG...TACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTTTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
||
| CDS TCA 90 bp | CTGCTCACGGAAGCGCTCCACCTGATCCAGAAGTGCGTCCACGAGTaGCGGCGCCGTGTGCCCTTCCAGAGCCGCGAGGCGGGTGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTEALHLIQKCVHE*RRRVPFQSREAGAE Trigger: CTCCGCACCCGCCTCGCGGCTCTGGAAGGGCACACGGCGCCGTCACTCGTGGACGCACTTCTGGATCAGGTGGAGCGCTTCCGTGAGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS TCA 90 bp | GCGCCTTCCTCCTGTCGTCGCAGCTGCTCACGGAAGCGCTCCACCTaGTCCAGAAGTGCGTCCACGAGTGACGGCGCCGTGTGCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: APSSCRRSCSRKRST*SRSASTSDGAVCPS Trigger: GGAAGGGCACACGGCGCCGTCACTCGTGGACGCACTTCTGGATCAGGTGGAGCGCTTCCGTGAGCAGCTGCGACGACAGGAGGAAGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 90 bp | TTTTCCTCTAGACGCTCCGTAAGTCTTTCAACTTCCTGCCGCAGCTaGGTCTCCGAAGCGCCTTCCTCCTGTCGTCGCAGCTGCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: FSSRRSVSLSTSCRS*VSEAPSSCRRSCSR Trigger: CCGTGAGCAGCTGCGACGACAGGAGGAAGGCGCTTCGGAGACCCAGCTGCGGCAGGAAGTTGAAAGACTTACGGAGCGTCTAGAGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS GCA 90 bp | GGAGCGGCACAGAACATCACTGGCGGCCCTGGCTTTCTCCTTCTCTaGCACACTTCGCCGAAGCAAGACTACCTCCTTCTCTTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: GAAQNITGGPGFLLL*HTSPKQDYLLLLLM Trigger: CATGAGCAAGAGAAGGAGGTAGTCTTGCTTCGGCGAAGTGTGGCAGAGAAGGAGAAAGCCAGGGCCGCCAGTGATGTTCTGTGCCGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 90 bp | CGCTCCAGCGCAGTGTCCCGGGACATCCTCATGGCTGTCAGCTCCTaGTTTGCTTCCGCACAGTCACTTATTTTCTCCTCCAACTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSSAVSRDILMAVSS*FASAQSLIFSSNCL Trigger: CAGACAGTTGGAGGAGAAAATAAGTGACTGTGCGGAAGCAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGGACACTGCGCTGGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS-3UTR CAA 90 bp | GATGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTCAATGTCCTGCGCAGTaGGTGGGTCTCATCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: DGATTLERGHTAPTATSPQCPAQ*VGLISQ Trigger: TTGGCTGATGAGACCCACCAACTGCGCAGGACATTG...AGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 90 bp | CTAGCATCTGCACTCGCTCCAGCGCAGTGTCCCGGGACATCCTCATaGCTGTCAGCTCCTGGTTTGCTTCCGCACAGTCACTTATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LASALAPAQCPGTSS*LSAPGLLPHSHLFS Trigger: AGAAAATAAGTGACTGTGCGGAAGCAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGGACACTGCGCTGGAGCGAGTGCAGATGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS-3UTR CAA 90 bp | TGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTTCCAGAAGCATCGCTGCTaGTTTGCTCTAGCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: WSYHPGKRTHCSHSNFPFQKHRC*FALAQQ Trigger: CTGCTGAGCTAGAGCAAACAAGCAGCGATGCTTCTG...GAAGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | GATGGAGCTACCACCCTGGAAAGAGGACACACTGCTCCCACAGCAACTTCCCCTCAGAAGCATCGCTGCTaGTTTGCTCTAGCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: DGATTLERGHTAPTATSPQKHRC*FALAQQ Trigger: CTGCTGAGCTAGAGCAAACAAGCAGCGATGCTTCTG...AGGGGAAGTTGCTGTGGGAGCAGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS GCA 90 bp | CAGCGCAGTGTCCCGGGACATCCTCATGGCTGTCAGCTCCTGGTTTaGTTCCGCACAGTCACTTATTTTCTCCTCCAACTGTCTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: QRSVPGHPHGCQLLV*FRTVTYFLLQLSVK Trigger: CTTAACAGACAGTTGGAGGAGAAAATAAGTGACTGTGCGGAAGCAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGGACACTGCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS-3UTR CAA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTCAATGTCCTGCGCAGTaGGTGGGTCTCATCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: VYLTTQQDGATTLERGHTQCPAQ*VGLISQ Trigger: TTGGCTGATGAGACCCACCAACTGCGCAGGACATTG...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | AGCACAGACCAGTCAGGGAGTGTATCTCACTACTCAACAGGATGGAGCTACCACCTTTTCCTCCAGCTCTaGAATCCTACTGTGCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: STDQSGSVSHYSTGWSYHLFLQL*NPTVRS Trigger: CGAGCGCACAGTAGGATTCAAGAGCTGGAGGAAAAG...GTGGTAGCTCCATCCTGTTGAGTAGTGAGATACACTCCCTGACTGGTCTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | CAAGATGACCTTCCAGTGACCCTGCCCATTTGGGCCCTAGATCCCAGGAGAATGCTGTCTCTGGGACACTaGGTACATCAAGGACATGAT | + |
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Preference number: 5 (lower is better) Translates to: QDDLPVTLPIWALDPRRMLSLGH*VHQGHD Trigger: ATCATGTCCTTGATGTACCAAGTGTCCCAGAGACAG...CATTCTCCTGGGATCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | GTGTATCTCACTACTCAACAGGATGGAGCTACCACCCTGGAAAGAGGACACACTCTGTCTCTGGGACACTaGGTACATCAAGGACATGAT | + |
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Preference number: 5 (lower is better) Translates to: VYLTTQQDGATTLERGHTLSLGH*VHQGHD Trigger: ATCATGTCCTTGATGTACCAAGTGTCCCAGAGACAG...AGTGTGTCCTCTTTCCAGGGTGGTAGCTCCATCCTGTTGAGTAGTGAGATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | CTGTCAATAGTTCCCTCTGACCAAGTCTCACCATGGTCAAATGAAAACAAGATGCTTTTCCTCCAGCTCTaGAATCCTACTGTGCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LSIVPSDQVSPWSNENKMLFLQL*NPTVRS Trigger: CGAGCGCACAGTAGGATTCAAGAGCTGGAGGAAAAG...CATCTTGTTTTCATTTGACCATGGTGAGACTTGGTCAGAGGGAACTATTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | AATAAAGGTGCTTTCCCTTTTGGAAATACAAGTGTTTTGCAGGGTGATGGTACTCAATGTCCTGCGCAGTaGGTGGGTCTCATCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: NKGAFPFGNTSVLQGDGTQCPAQ*VGLISQ Trigger: TTGGCTGATGAGACCCACCAACTGCGCAGGACATTG...AGTACCATCACCCTGCAAAACACTTGTATTTCCAAAAGGGAAAGCACCTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS-3UTR CAA 90 bp | GTTCTAGTGTATCATGTAACTGTAATGCAGCACAGACCAGTCAGGGAGTGTATCCTGTCTCTGGGACACTaGGTACATCAAGGACATGAT | + |
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Preference number: 5 (lower is better) Translates to: VLVYHVTVMQHRPVRECILSLGH*VHQGHD Trigger: ATCATGTCCTTGATGTACCAAGTGTCCCAGAGACAG...GATACACTCCCTGACTGGTCTGTGCTGCATTACAGTTACATGATACACTAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS TCA 72 bp | TCCTGTCGTCGCAGCTGCTCACGGAAGCGCTCCACCTaGTCCAGAAGTGCGTCCACGAGTGACGGCGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SCRRSCSRKRST*SRSASTSDGAV Trigger: CACGGCGCCGTCACTCGTGGACGCACTTCTGGATCAGGTGGAGCGCTTCCGTGAGCAGCTGCGACGACAGGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 72 bp | GGGTCTCATCAGCCAAGGAGCGGCACAGAACATCACTaGCGGCCCTGGCTTTCTCCTTCTCTGCCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: GSHQPRSGTEHH*RPWLSPSLPHF Trigger: GAAGTGTGGCAGAGAAGGAGAAAGCCAGGGCCGCCAGTGATGTTCTGTGCCGCTCCTTGGCTGATGAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 72 bp | GGCAGTTTTGTTCCCCGTATGAATCCGACAGGGTCCTaGCTCCCGGGAGTCCTGTCTCTGGGACACTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: GSFVPRMNPTGS*LPGVLSLGHLV Trigger: TACCAAGTGTCCCAGAGACAGGACTCCCGGGAGCCAGGACCCTGTCGGATTCATACGGGGAACAAAACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS GCA 72 bp | CAGAACATCACTGGCGGCCCTGGCTTTCTCCTTCTCTaGCACACTTCGCCGAAGCAAGACTACCTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QNITGGPGFLLL*HTSPKQDYLLL Trigger: GAGAAGGAGGTAGTCTTGCTTCGGCGAAGTGTGGCAGAGAAGGAGAAAGCCAGGGCCGCCAGTGATGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 72 bp | GCAGTGTCCCGGGACATCCTCATGGCTGTCAGCTCCTaGTTTGCTTCCGCACAGTCACTTATTTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AVSRDILMAVSS*FASAQSLIFSS Trigger: GGAGGAGAAAATAAGTGACTGTGCGGAAGCAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGGACACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS CAA 72 bp | TGCCACACTTCGCCGAAGCAAGACTACCTCCTTCTCTaGCTCATGCTGAGGCTGGCTCATCAGCTGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: CHTSPKQDYLLL*LMLRLAHQLLH Trigger: ATGCAACAGCTGATGAGCCAGCCTCAGCATGAGCAAGAGAAGGAGGTAGTCTTGCTTCGGCGAAGTGTGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CAA 72 bp | TGTCCCGGGACATCCTCATGGCTGTCAGCTCCTGGTTaGCTTCCGCACAGTCACTTATTTTCTCCTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: CPGTSSWLSAPG*LPHSHLFSPPT Trigger: AGTTGGAGGAGAAAATAAGTGACTGTGCGGAAGCAAACCAGGAGCTGACAGCCATGAGGATGTCCCGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 |
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| CDS GCA 72 bp | TTAATAACACTCTGGCCAGAAGCATCGCTGCTTGTTTaGTCTAGCTCAGCAGGGCTTTTCTCCCCAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: LITLWPEASLLV*SSSAGLFSPAS Trigger: AGACGCTGGGGAGAAAAGCCCTGCTGAGCTAGAGCAAACAAGCAGCGATGCTTCTGGCCAGAGTGTTATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 72 bp | GGGTCACATGCTCCAGTGCATCCATCTCTAAGTACTTaGCAGTTTTGTTCCCCGTATGAATCCGACAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GSHAPVHPSLST*QFCSPYESDRV Trigger: GACCCTGTCGGATTCATACGGGGAACAAAACTGCCAAGTACTTAGAGATGGATGCACTGGAGCATGTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030991.14 ENSMUST00000087737.10 ENSMUST00000114359.2 |
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| CDS CCA 72 bp | AGTCGATTTTCTTCCTGTAACTTCTTAATAACACTCTaGCCAGAAGCATCGCTGCTTGTTTGCTCTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRFSSCNFLITL*PEASLLVCSSQ Trigger: CTGGCTAGAGCAAACAAGCAGCGATGCTTCTGGCCAGAGTGTTATTAAGAAGTTACAGGAAGAAAATCGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030991.14 |
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| CDS CCA 72 bp | AGTCGATTTTCTTCCTGTAACTTCTTAATAACACTCTaGCCAGAAGCATCGCTGCTTGTTTGCTCTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRFSSCNFLITL*PEASLLVCSSS Trigger: TGAGCTAGAGCAAACAAGCAGCGATGCTTCTGGCCAGAGTGTTATTAAGAAGTTACAGGAAGAAAATCGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087737.10 ENSMUST00000114359.2 |
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