Pregenerated sensors for TNFSF15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050395Ensembl transcript IDs: ENSMUST00000062246.8, ENSMUST00000239480.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTACTACTTTCCCAGTCATTGTGTGGGAGTCACGCTGCCCAGCTCTaGTTCGAAGGTTTCCTAGAAGATGGCTCAGCAGTGGTTTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LLLSQSLCGSHAAQL*FEGFLEDGSAVVWG Trigger: GCCCCAAACCACTGCTGAGCCATCTTCTAGGAAACCTTCGAAGCAGAGCTGGGCAGCGTGACTCCCACACAATGACTGGGAAAGTAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | TGGGAGTCACGCTGCCCAGCTCTGCTTCGAAGGTTTCCTAGAAGATaGCTCAGCAGTGGTTTGGGGCTAAGTTTACCCTCTGACTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: WESRCPALLRRFPRR*LSSGLGLSLPSDSL Trigger: CAAGGAGTCAGAGGGTAAACTTAGCCCCAAACCACTGCTGAGCCATCTTCTAGGAAACCTTCGAAGCAGAGCTGGGCAGCGTGACTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR TCA 90 bp | GCCTTGTGCACAGTGAACTCGTGGGCTTCTATGATCCAGAGTGCTTaGCAGGCACACACTTGGAATTTCCTTAGGAGTGACATAGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: ALCTVNSWASMIQSA*QAHTWNFLRSDIVC Trigger: ACAAACTATGTCACTCCTAAGGAAATTCCAAGTGTGTGCCTGTCAAGCACTCTGGATCATAGAAGCCCACGAGTTCACTGTGCACAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | GGTTTGAGGATAATTTGTGGGAACCAATTCTCTCCTTCCAGCTTTTaGGTTCTGGGAGGTCAAACCCAGGTGTCAGGCTTAATGACAAGC | + |
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Preference number: 1 (lower is better) Translates to: GLRIICGNQFSPSSF*VLGGQTQVSGLMTS Trigger: GCTTGTCATTAAGCCTGACACCTGGGTTTGACCTCCCAGAACCCAAAAGCTGGAAGGAGAGAATTGGTTCCCACAAATTATCCTCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | CTCCTCAAACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTaGGTTTACAGATGTATGCCATTACACTTGACTCCATCATATATA | + |
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Preference number: 1 (lower is better) Translates to: LLKLTAILLAQHPMC*VYRCMPLHLTPSYI Trigger: TATATATGATGGAGTCAAGTGTAATGGCATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGTTTGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | TTGTCGAATTCAGCTCTAACTGAACTGCTGAATTCAGAAAGGACTTaGACAGAGGGCACTGTGGAAAGGTTCTGTCCTGAAATCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: LSNSALTELLNSERT*TEGTVERFCPEISR Trigger: TCTACTGATTTCAGGACAGAACCTTTCCACAGTGCCCTCTGTCCAAGTCCTTTCTGAATTCAGCAGTTCAGTTAGAGCTGAATTCGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR TCA 90 bp | AACCTGCTCAAGCAATTAATCCCCAATGTCACAATCATGGGACCGTaGTTGAGTAAGAGCTTAAGAGAAATACCATGCAAGAGAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: NLLKQLIPNVTIMGP*LSKSLREIPCKRVL Trigger: CAGCACTCTCTTGCATGGTATTTCTCTTAAGCTCTTACTCAATCACGGTCCCATGATTGTGACATTGGGGATTAATTGCTTGAGCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | AGTAGAATAAGACCACCATGGATCAAACTGAAAGGGTGTTGTGTATaGTCAGGGGCAGGAAGTCTACTTTTAGCCTCAATACTCCATCAA | + |
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Preference number: 1 (lower is better) Translates to: SRIRPPWIKLKGCCV*SGAGSLLLASILHQ Trigger: TTGATGGAGTATTGAGGCTAAAAGTAGACTTCCTGCCCCTGACCATACACAACACCCTTTCAGTTTGATCCATGGTGGTCTTATTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR TCA 90 bp | CTGTGGAAAGGTTCTGTCCTGAAATCAGTAGATTGTGCCATTGGATaGGGCGTGTTTCAATTTTTAAAACCCAGCAGGTCTCTATCAAAC | + |
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Preference number: 1 (lower is better) Translates to: LWKGSVLKSVDCAIG*GVFQFLKPSRSLSN Trigger: GTTTGATAGAGACCTGCTGGGTTTTAAAAATTGAAACACGCCTCATCCAATGGCACAATCTACTGATTTCAGGACAGAACCTTTCCACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR GCA 90 bp | CATGTGCATTTGGAATTCCCACTTGTATGTTTGGATACTAAAGGATaGAATCAGAAGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: HVHLEFPLVCLDTKG*NQKKGEVSPSQQKT Trigger: GGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAAATGCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR GCA 90 bp | TATAAGTCTATGTTGCTCAATATTCTCATGTTCCATGAAGATATATaGAGGCAGAGAGAGCATCTCACTCTCCTTTCTGACCTTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: YKSMLLNILMFHEDI*RQREHLTLLSDLGV Trigger: GACTCCAAGGTCAGAAAGGAGAGTGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCAACATAGACTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR GCA 90 bp | TCACTCTGGCTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTaGTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLWLLLGKCFPISLC*SIFSCSMKIYAGRE Trigger: CTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAGCCAGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CCA 90 bp | AGTGTTCTATGTTCCATGTGCATTTGGAATTCCCACTTGTATGTTTaGATACTAAAGGATGCAATCAGAAGAAAGGTGAGGTTTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SVLCSMCIWNSHLYV*ILKDAIRRKVRFLL Trigger: AAGGAGAAACCTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAAATGCACATGGAACATAGAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR TCA 90 bp | GCACTAGGTAAGCATTTACAGACCCGATTTGAATTCAGCAGCCTTTaGGATGCATTTGACCGAAAAGCATTTCTCACTAAATTAACTATT | + |
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Preference number: 1 (lower is better) Translates to: ALGKHLQTRFEFSSL*DAFDRKAFLTKLTI Trigger: AATAGTTAATTTAGTGAGAAATGCTTTTCGGTCAAATGCATCTCAAAGGCTGCTGAATTCAAATCGGGTCTGTAAATGCTTACCTAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATAATAAGTCCTTCTTCTaGGACAGCCCTTCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYNKSFF*DSPSSR Trigger: CCTGGAGGAAGGGCTGTCTCAGAAGAAGGACTTATT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | GTCTTGGATAAATTCCCAAGCCATCCAGATCACTTCTGGGCAGCTTaGAAGGCCCTTGACACAAAGCTTGGGTTTAGTAGAGGGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: VLDKFPSHPDHFWAA*KALDTKLGFSRGDD Trigger: GTCATCCCCTCTACTAAACCCAAGCTTTGTGTCAAGGGCCTTCAAAGCTGCCCAGAAGTGATCTGGATGGCTTGGGAATTTATCCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATAATTCAGAAAGGACTTaGACAGAGGGCACTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYNSERT*TEGTVE Trigger: TTCCACAGTGCCCTCTGTCCAAGTCCTTTCTGAATT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | AGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAATTCCTGTCTaGGATAAATTCCCAAGCCATCCAGATCACTTCTGGGCAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: RHKDSSIFGCQEIPV*DKFPSHPDHFWAAL Trigger: CAAAGCTGCCCAGAAGTGATCTGGATGGCTTGGGAATTTATCCAAGACAGGAATTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATAGGCACAAAAGAATGTaGAAATGCATTGCCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYRHKRM*KCIASW Trigger: CCAAGAGGCAATGCATTTCCACATTCTTTTGTGCCT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCTCACGGCAATCCTCCTaGCTCAGCATCCCATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSSRQSS*LSIPCA Trigger: AGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGA...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATTCTGTCTTTAGCTCTTaGTCTGGAGTAAGTTCATTG | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYSVFSS*SGVSSL Trigger: CAATGAACTTACTCCAGATCAAGAGCTAAAGACAGA...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATGTGCTCCATTTCACTTaGTGTCTGTCTTTAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYVLHFT*CLSLNS Trigger: GGAATTTAAAGACAGACATCAAGTGAAATGGAGCAC...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATATGCTCCTGTTTGCATaGGAATACTTAGTATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYMLLFA*EYLVSW Trigger: CCAAGATACTAAGTATTCCCATGCAAACAGGAGCAT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | GAGCATCTCACTCTCCTTTCTGACCTTGGAGTCAGACTGGAGTCATaGATAAAGCATCCTCAATTGACCAGTGAGCATTACTCTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: EHLTLLSDLGVRLES*IKHPQLTSEHYSQG Trigger: ACCTTGAGAGTAATGCTCACTGGTCAATTGAGGATGCTTTATCAATGACTCCAGTCTGACTCCAAGGTCAGAAAGGAGAGTGAGATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATGGAAGTTATACATTTTaGGTGGTAGTTGATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: THGNPPGSASHVLGLQMYGSYTF*VVVDQE Trigger: TTCCTGATCAACTACCACTCAAAATGTATAACTTCC...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGACTTCTGGGCAGCTTTaGAGGCCCTTGACACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFETSGQL*RPLTQS Trigger: GCTTTGTGTCAAGGGCCTTCAAAGCTGCCCAGAAGT...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAAATAAGTCCTTCTTCTaGGACAGCCCTTCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISNKSFF*DSPSSR Trigger: CCTGGAGGAAGGGCTGTCTCAGAAGAAGGACTTATT...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGTCTCACTCTCCTTTCTaGCCTTGGAGTCAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFESHSPF*PWSQTG Trigger: TCCAGTCTGACTCCAAGGTCAGAAAGGAGAGTGAGA...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | AATTATTACTCAACAAATTTTGATCAGCTACTACTTTCCCAGTCATaGTGTGGGAGTCACGCTGCCCAGCTCTGCTTCGAAGGTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: NYYSTNFDQLLLSQS*CGSHAAQLCFEGFL Trigger: TAGGAAACCTTCGAAGCAGAGCTGGGCAGCGTGACTCCCACACAATGACTGGGAAAGTAGTAGCTGATCAAAATTTGTTGAGTAATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | AGCTTGGGTTTAGTAGAGGGGATGACCAGGTCACTCTGGCTACTTTaGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLGLVEGMTRSLWLL*GKCFPISLCCSIFS Trigger: TGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAGCCAGAGTGACCTGGTCATCCCCTCTACTAAACCCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCGGTCTCTATCAAACATaGGCTGTACTGGGTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSGLYQT*AVLGFP Trigger: TGGAAAACCCAGTACAGCTCATGTTTGATAGAGACC...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGGCTAAGTTTACCCTCTaGCTCCTTGTGGCATCTACC | + |
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Preference number: 2 (lower is better) Translates to: RPVILQEVEDRKSGQCKLAKFTL*LLVAST Trigger: GGTAGATGCCACAAGGAGTCAGAGGGTAAACTTAGC...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTGTGTGGTTTCCCCTATaGAGAACCAGGGGAAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: LLLGKCFPISLCCSIFSCVWFPL*RTRGRR Trigger: TCGCCTTCCCCTGGTTCTTCATAGGGGAAACCACAC...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGCTCTTCATGGTCCTGTaGGCTGAGTGCCCAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLLFMVL*AECPEH Trigger: ATGCTCTGGGCACTCAGCCCACAGGACCATGAAGAG...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCAAGCTCCACAGACGATaGAGATGCCAATCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSKLHRR*RCQSVR Trigger: TCTAACAGATTGGCATCTCCATCGTCTGTGGAGCTT...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR CAA 90 bp | TCTGACCTTGGAGTCAGACTGGAGTCATTGATAAAGCATCCTCAATaGACCAGTGAGCATTACTCTCAAGGTTTTAGACCTAAGCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SDLGVRLESLIKHPQ*TSEHYSQGFRPKPK Trigger: TTTTGGCTTAGGTCTAAAACCTTGAGAGTAATGCTCACTGGTCAATTGAGGATGCTTTATCAATGACTCCAGTCTGACTCCAAGGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGCAATCAGAAGAAAGGTaGGGTTTCTCCTTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEQSEER*GFSFTA Trigger: TGCTGTGAAGGAGAAACCTCACCTTTCTTCTGATTG...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCAACCACCTAGATGGCTaGCTTGAAGTTATACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSNHLDG*LEVILW Trigger: CCAAAGTATAACTTCAAGTCAGCCATCTAGGTGGTT...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAAGTTACATGTGTGCATaGCACATCATTTGTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISSYMCA*HIICMG Trigger: CCCCATACAAATGATGTGGCATGCACACATGTAACT...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTGGACAGAGGGCACTGTaGAAAGGTTCTGTCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLGQRAL*KGSVLK Trigger: TTTCAGGACAGAACCTTTCCACAGTGCCCTCTGTCC...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATGGACAGAGGGCACTGTaGAAAGGTTCTGTCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYGQRAL*KGSVLK Trigger: TTTCAGGACAGAACCTTTCCACAGTGCCCTCTGTCC...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTTTGACTTTCTCTTCATaGTCCTGTGGGCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLLGKCFPISLCCSIFSCLTFSS*SCGLSA Trigger: GGCACTCAGCCCACAGGACCATGAAGAGAAAGTCAA...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTTTGACTTTCTCTTCATaGTCCTGTGGGCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLLTFSS*SCGLSA Trigger: GGCACTCAGCCCACAGGACCATGAAGAGAAAGTCAA...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTTCTCCTTCCAGCTTTTaGGTTCTGGGAGGTCAAACC | + |
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Preference number: 2 (lower is better) Translates to: LLLGKCFPISLCCSIFSCSPSSF*VLGGQT Trigger: GGTTTGACCTCCCAGAACCCAAAAGCTGGAAGGAGA...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAATATACTGGACAACGATaGAGACAACATTCTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QNKCMSGTRTQASLAVRKYTGQR*RQHSQE Trigger: TTCCTGAGAATGTTGTCTCCATCGTTGTCCAGTATA...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGAGTGTCTCTATCAGCTaGTTAGCCTATACTGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFESVSIS*LAYTGQ Trigger: TTGTCCAGTATAGGCTAACCAGCTGATAGAGACACT...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGTGCTCCATTTCACTTaGTGTCTGTCTTTAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEVLHFT*CLSLNS Trigger: GGAATTTAAAGACAGACATCAAGTGAAATGGAGCAC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGATACTTCAAGAAGTTaGAGACAGAAAAAGTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEDTSRS*RQKKWP Trigger: TGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGTATTCTCATGTTCCATaGAGATATATGCAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEYSHVP*RYMQAE Trigger: CTCTGCCTGCATATATCTTCATGGAACATGAGAATA...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCTTGGATACTAAAGGATaGAATCAGAAGAAAGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSLDTKG*NQKKGE Trigger: CTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAA...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAGTTCTATGTTCCATGTaGATTTGGAATTCCCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISVLCSM*IWNSHL Trigger: CAAGTGGGAATTCCAAATGCACATGGAACATAGAAC...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACCAATTCCTTTTAGGGAATATAGGCACAAAAGAATGTaGAAATGCATTGCCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RKVRFLLHSRKPIPFREYRHKRM*KCIASW Trigger: CCAAGAGGCAATGCATTTCCACATTCTTTTGTGCCT...ATATTCCCTAAAAGGAATTGGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAGCCACATCATTTGTATaGGGGTTTGAGGATAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISATSFV*GFEDNL Trigger: CAAATTATCCTCAAACCCCCATACAAATGATGTGGC...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGCCACATCATTTGTATaGGGGTTTGAGGATAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEATSFV*GFEDNL Trigger: CAAATTATCCTCAAACCCCCATACAAATGATGTGGC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATAAGATGGCTCAGCAGTaGTTTGGGGCTAAGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYKMAQQ*FGAKFT Trigger: GGTAAACTTAGCCCCAAACCACTGCTGAGCCATCTT...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGAGGAAATTCCTGTCTTaGATAAATTCCCAAGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFERKFLS*INSQAI Trigger: GATGGCTTGGGAATTTATCCAAGACAGGAATTTCCT...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 90 bp | AAGTGTTCTATGTTCCATGTGCATTTGGAATTCCCACTTGTATGTTaGGATACTAAAGGATGCAATCAGAAGAAAGGTGAGGTTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KCSMFHVHLEFPLVC*DTKGCNQKKGEVSP Trigger: AGGAGAAACCTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAAATGCACATGGAACATAGAACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATGGTCTCTATCAAACATaGGCTGTACTGGGTTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYGLYQT*AVLGFP Trigger: TGGAAAACCCAGTACAGCTCATGTTTGATAGAGACC...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGGAATTCAGCTCTAACTaGACTGCTGAATTCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RPVILQEVEDRKSGQCKLEFSSN*TAEFRK Trigger: CTTTCTGAATTCAGCAGTTCAGTTAGAGCTGAATTC...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGGAAGTTATACATTTTaGGTGGTAGTTGATCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEGSYTF*VVVDQE Trigger: TTCCTGATCAACTACCACTCAAAATGTATAACTTCC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCATTGGATACTAAAGGATaGAATCAGAAGAAAGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISLDTKG*NQKKGE Trigger: CTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAA...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAACCTATAAGTCTATGTTaGTCAATATTCTCATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QNKCMSGTRTQASLAVRKPISLC*SIFSCS Trigger: GGAACATGAGAATATTGAGCAACATAGACTTATAGG...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCCCTATAAGTCTATGTTaGTCAATATTCTCATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSPISLC*SIFSCS Trigger: GGAACATGAGAATATTGAGCAACATAGACTTATAGG...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGCACAGACGATGGAGATaGCAATCTGTTAGAACGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLHRRWR*QSVRTS Trigger: ACTCGTTCTAACAGATTGGCATCTCCATCGTCTGTG...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGTGGCATCAAATTCAGTaGCATGTGCCAAGAGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLWHQIQ*HVPRVE Trigger: CTCTACTCTTGGCACATGGCACTGAATTTGATGCCA...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGTCCCACTTGTATGTTTaGATACTAAAGGATGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: LLFAWEYLVSWKQKCWFESHLYV*ILKDAI Trigger: GATTGCATCCTTTAGTATCCAAACATACAAGTGGGA...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGTATACTGGACAACGATaGAGACAACATTCTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RPVILQEVEDRKSGQCKLYTGQR*RQHSQE Trigger: TTCCTGAGAATGTTGTCTCCATCGTTGTCCAGTATA...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATGGACTCAAGCATCTTTaGCTGTCAGGAAATTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYGLKHL*LSGNSC Trigger: ACAGGAATTTCCTGACAGCCAAAGATGCTTGAGTCC...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATAACCACCTAGATGGCTaGCTTGAAGTTATACTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYNHLDG*LEVILW Trigger: CCAAAGTATAACTTCAAGTCAGCCATCTAGGTGGTT...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAAGACTATATAAAGGCTaGAAACCAAACTTGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CSIFSCSMKIYAGRESISRLYKG*KPNLKA Trigger: TGCTTTCAAGTTTGGTTTGCAGCCTTTATATAGTCT...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGTCCCACTTGTATGTTTaGATACTAAAGGATGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: RPVILQEVEDRKSGQCKLSHLYV*ILKDAI Trigger: GATTGCATCCTTTAGTATCCAAACATACAAGTGGGA...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTGAATTCAGCTCTAACTaGACTGCTGAATTCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLGKCFPISLCCSIFSCEFSSN*TAEFRK Trigger: CTTTCTGAATTCAGCAGTTCAGTTAGAGCTGAATTC...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATGATACTTCAAGAAGTTaGAGACAGAAAAAGTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYDTSRS*RQKKWP Trigger: TGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATC...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATTGTTCCATGTGCATTTaGAATTCCCACTTGTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYCSMCI*NSHLYV Trigger: AACATACAAGTGGGAATTCCAAATGCACATGGAACA...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTTTTGAGGATAATTTGTaGGAACCAATTCTCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLFEDNL*EPILSF Trigger: GAAGGAGAGAATTGGTTCCCACAAATTATCCTCAAA...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | TCCCAGTCATTGTGTGGGAGTCACGCTGCCCAGCTCTaGTTCGAAGGTTTCCTAGAAGATGGCTCAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQSLCGSHAAQL*FEGFLEDGSAV Trigger: CACTGCTGAGCCATCTTCTAGGAAACCTTCGAAGCAGAGCTGGGCAGCGTGACTCCCACACAATGACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | AGGCTGCTCATCTTCTTTCAGGTGTGGTTTCCCCTATaGAGAACCAGGGGAAGGCGACCTCACCTTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLLIFFQVWFPL*RTRGRRPHLSL Trigger: CAGGGAAAGGTGAGGTCGCCTTCCCCTGGTTCTTCATAGGGGAAACCACACCTGAAAGAAGATGAGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | ACCATGCAAGAGAGTGCTGGCCATGGCTGTGCCTTGTaGACAGTGAACTCGTGGGCTTCTATGATCCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TMQESAGHGCAL*TVNSWASMIQS Trigger: ACTCTGGATCATAGAAGCCCACGAGTTCACTGTGCACAAGGCACAGCCATGGCCAGCACTCTCTTGCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | CGCTGCCCAGCTCTGCTTCGAAGGTTTCCTAGAAGATaGCTCAGCAGTGGTTTGGGGCTAAGTTTACCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RCPALLRRFPRR*LSSGLGLSLPS Trigger: AGAGGGTAAACTTAGCCCCAAACCACTGCTGAGCCATCTTCTAGGAAACCTTCGAAGCAGAGCTGGGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | CTTCTGAGACAGCCCTTCCTCCAGGTCACCTCAGGCTaGTCATCTTCTTTCAGGTGTGGTTTCCCCTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLRQPFLQVTSG*SSSFRCGFPYE Trigger: TTCATAGGGGAAACCACACCTGAAAGAAGATGAGCAGCCTGAGGTGACCTGGAGGAAGGGCTGTCTCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | CCAAGGCTCTGGCATGCCCTGCTGTTGAGTAGACTCTaGCATGCACTGAGAAACGATGTGGTACAAGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: PRLWHALLLSRL*HALRNDVVQVH Trigger: GTGTACTTGTACCACATCGTTTCTCAGTGCATGTCAGAGTCTACTCAACAGCAGGGCATGCCAGAGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | GAGAAATACCATGCAAGAGAGTGCTGGCCATGGCTGTaGCTTGTGCACAGTGAACTCGTGGGCTTCTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EKYHARECWPWL*LVHSELVGFYD Trigger: ATCATAGAAGCCCACGAGTTCACTGTGCACAAGGCACAGCCATGGCCAGCACTCTCTTGCATGGTATTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATCCTGAAATCAGTAGATaGTGCCATTGGATGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: THGNPPGSASHVLGLQMYPEISR*CHWMRR Trigger: ACGCCTCATCCAATGGCACAATCTACTGATTTCAGG...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATAGGACTCAAGCATCTTaGGCTGTCAGGAAATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: THGNPPGSASHVLGLQMYRTQAS*AVRKFL Trigger: CAGGAATTTCCTGACAGCCAAAGATGCTTGAGTCCT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | ATGGCTCAGCAGTGGTTTGGGGCTAAGTTTACCCTCTaGCTCCTTGTGGCATCTACCATGACACGAGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: MAQQWFGAKFTL*LLVASTMTRAF Trigger: AAATGCTCGTGTCATGGTAGATGCCACAAGGAGTCAGAGGGTAAACTTAGCCCCAAACCACTGCTGAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | CAAGCCCCTAGAGTTGGTGAGGGAATGAATTACTCTTaGAGTTCATTAGGATCCACTGAACTCTGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QAPRVGEGMNYS*SSLGSTELWAG Trigger: CCCTGCCCAGAGTTCAGTGGATCCTAATGAACTCCAAGAGTAATTCATTCCCTCACCAACTCTAGGGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | AATTCCCAAGCCATCCAGATCACTTCTGGGCAGCTTTaGAGGCCCTTGACACAAAGCTTGGGTTTAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NSQAIQITSGQL*RPLTQSLGLVE Trigger: CTCTACTAAACCCAAGCTTTGTGTCAAGGGCCTTCAAAGCTGCCCAGAAGTGATCTGGATGGCTTGGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | TCCACTGAACTCTGGGCAGGGCTCTCAGGTTTGTCATaGTCAAATAGAAGTACACCAAAGGGTGGCCATATG | + |
|
Preference number: 3 (lower is better) Translates to: STELWAGLSGLS*SNRSTPKGGHM Trigger: CATATGGCCACCCTTTGGTGTACTTCTATTTGATCATGACAAACCTGAGAGCCCTGCCCAGAGTTCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATTCTGGAGTAAGTTCATaGTCGAATTCAGCTCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: THGNPPGSASHVLGLQMYSGVSS*SNSALT Trigger: AGTTAGAGCTGAATTCGACAATGAACTTACTCCAGA...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATATGTTCCATGTGCATTaGGAATTCCCACTTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: THGNPPGSASHVLGLQMYMFHVH*EFPLVC Trigger: ACATACAAGTGGGAATTCCAAATGCACATGGAACAT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | GGGAATGAATTACTCTTGGAGTTCATTAGGATCCACTaGACTCTGGGCAGGGCTCTCAGGTTTGTCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: GNELLLEFIRIH*TLGRALRFVMI Trigger: GATCATGACAAACCTGAGAGCCCTGCCCAGAGTTCAGTGGATCCTAATGAACTCCAAGAGTAATTCATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | TCAGCTCTAACTGAACTGCTGAATTCAGAAAGGACTTaGACAGAGGGCACTGTGGAAAGGTTCTGTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SALTELLNSERT*TEGTVERFCPE Trigger: TTCAGGACAGAACCTTTCCACAGTGCCCTCTGTCCAAGTCCTTTCTGAATTCAGCAGTTCAGTTAGAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | ATAATTTGTGGGAACCAATTCTCTCCTTCCAGCTTTTaGGTTCTGGGAGGTCAAACCCAGGTGTCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IICGNQFSPSSF*VLGGQTQVSGL Trigger: TAAGCCTGACACCTGGGTTTGACCTCCCAGAACCCAAAAGCTGGAAGGAGAGAATTGGTTCCCACAAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATTTGATGACTGACACTTaGTTGTTGGTCTTCATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: THGNPPGSASHVLGLQMYLMTDT*LLVFIV Trigger: TACTATGAAGACCAACAACAAAGTGTCAGTCATCAA...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGCACTTCTGGGCAGCTTaGAAGGCCCTTGACACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEHFWAA*KALDTK Trigger: CTTTGTGTCAAGGGCCTTCAAAGCTGCCCAGAAGTG...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | GGTCAGAAAATTGGTTTAGGGATGAAGCCAGAGATGTaGCCACCATGTGTAAGCAGTCTCCTTGCTCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GQKIGLGMKPEM*PPCVSSLLALL Trigger: TAGAAGAGCAAGGAGACTGCTTACACATGGTGGTCACATCTCTGGCTTCATCCCTAAACCAATTTTCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | ATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGTaGGCCTCCTTCCTCTTGTGTGCACACAGCAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IVYVCLSVYLLL*ASFLLCAHSRV Trigger: TACTCTGCTGTGTGCACACAAGAGGAAGGAGGCTCACAGTAGCAAGTAAACAGATAAGCAAACGTACACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | AGTAACCTGTGCCGCATGCTGATTAATGGCTTTTGTTaGCAACAGAGACTTTTCAAAGCACCTCTAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SNLCRMLINGFC*QQRLFKAPLGC Trigger: ACAGCCTAGAGGTGCTTTGAAAAGTCTCTGTTGCCAACAAAAGCCATTAATCAGCATGCGGCACAGGTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | AGACCACCATGGATCAAACTGAAAGGGTGTTGTGTATaGTCAGGGGCAGGAAGTCTACTTTTAGCCTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RPPWIKLKGCCV*SGAGSLLLASI Trigger: TATTGAGGCTAAAAGTAGACTTCCTGCCCCTGACCATACACAACACCCTTTCAGTTTGATCCATGGTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGAATTCAGAAAGGACTaGGACAGAGGGCACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEEFRKD*DRGHCG Trigger: TCCACAGTGCCCTCTGTCCAAGTCCTTTCTGAATTC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | AGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTaGTACTGTGAGCCTCCTTCCTCTTGTGTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: RRKSCTFAYLFT*YCEPPSSCVHT Trigger: TGTGTGCACACAAGAGGAAGGAGGCTCACAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | GCCACATCATTTGTATGGGGGTTTGAGGATAATTTGTaGGAACCAATTCTCTCCTTCCAGCTTTTGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ATSFVWGFEDNL*EPILSFQLLGS Trigger: AGAACCCAAAAGCTGGAAGGAGAGAATTGGTTCCCACAAATTATCCTCAAACCCCCATACAAATGATGTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAAGGGTTTGAGGATAATTaGTGGGAACCAATTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QNKCMSGTRTQASLAVRKGFEDN*WEPILS Trigger: GGAGAGAATTGGTTCCCACAAATTATCCTCAAACCC...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | GGTTCTGTCCTGAAATCAGTAGATTGTGCCATTGGATaGGGCGTGTTTCAATTTTTAAAACCCAGCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSVLKSVDCAIG*GVFQFLKPSRS Trigger: AGACCTGCTGGGTTTTAAAAATTGAAACACGCCTCATCCAATGGCACAATCTACTGATTTCAGGACAGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | ATCTGGAGTAAGTTCATTGTCGAATTCAGCTCTAACTaGACTGCTGAATTCAGAAAGGACTTGGACAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IWSKFIVEFSSN*TAEFRKDLDRG Trigger: CCCTCTGTCCAAGTCCTTTCTGAATTCAGCAGTTCAGTTAGAGCTGAATTCGACAATGAACTTACTCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAATTCCCACTTGTATGTTTGGATACTAAAGGATGCAATCAGAAGAAAGGTGAATTCAGAAAGGACTaGGACAGAGGGCACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LEFPLVCLDTKGCNQKKGEFRKD*DRGHCG Trigger: TCCACAGTGCCCTCTGTCCAAGTCCTTTCTGAATTC...ACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCCAGGAAATTCCTGTCTaGGATAAATTCCCAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSQEIPV*DKFPSH Trigger: ATGGCTTGGGAATTTATCCAAGACAGGAATTTCCTG...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | ACAGTTACAGTCTTCAATAAACAGGGGCAAAATAAATaGATGTCAGGCACAAGGACTCAAGCATCTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVTVFNKQGQNK*MSGTRTQASLA Trigger: AGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTGCCCCTGTTTATTGAAGACTGTAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | GAAAGGTTCTGTCCTGAAATCAGTAGATTGTGCCATTaGATGAGGCGTGTTTCAATTTTTAAAACCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ERFCPEISRLCH*MRRVSIFKTQQ Trigger: CTGCTGGGTTTTAAAAATTGAAACACGCCTCATCCAATGGCACAATCTACTGATTTCAGGACAGAACCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | TGTCTGTCTTTAAATTCCTTCAGTGTCTCTATCAGCTaGTTAGCCTATACTGGACAACGATGGAGACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: CLSLNSFSVSIS*LAYTGQRWRQH Trigger: ATGTTGTCTCCATCGTTGTCCAGTATAGGCTAACCAGCTGATAGAGACACTGAAGGAATTTAAAGACAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAAATGTTCCATGTGCATTaGGAATTCCCACTTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: QNKCMSGTRTQASLAVRKMFHVH*EFPLVC Trigger: ACATACAAGTGGGAATTCCAAATGCACATGGAACAT...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGCCTGAAATCAGTAGATaGTGCCATTGGATGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLPEISR*CHWMRR Trigger: ACGCCTCATCCAATGGCACAATCTACTGATTTCAGG...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCTTTCTCAGTCTTTCTTaGGATTCTGTCTTTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSFLSLS*DSVFSS Trigger: AGAGCTAAAGACAGAATCCAAAGAAAGACTGAGAAA...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCATGACTGACACTTTGTaGTTGGTCTTCATAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSMTDTL*LVFIVH Trigger: ATGTACTATGAAGACCAACAACAAAGTGTCAGTCAT...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGGCTGCAAACCAAACTaGAAAGCAGATCTAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEGCKPN*KADLDK Trigger: TTTATCTAGATCTGCTTTCAAGTTTGGTTTGCAGCC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | AAGCAATTAATCCCCAATGTCACAATCATGGGACCGTaGTTGAGTAAGAGCTTAAGAGAAATACCATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQLIPNVTIMGP*LSKSLREIPCK Trigger: CTTGCATGGTATTTCTCTTAAGCTCTTACTCAATCACGGTCCCATGATTGTGACATTGGGGATTAATTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR GCA 72 bp | TTGGAATTCCCACTTGTATGTTTGGATACTAAAGGATaGAATCAGAAGAAAGGTGAGGTTTCTCCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LEFPLVCLDTKG*NQKKGEVSPSQ Trigger: CTGTGAAGGAGAAACCTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CCA 72 bp | TGTTCCATGTGCATTTGGAATTCCCACTTGTATGTTTaGATACTAAAGGATGCAATCAGAAGAAAGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSMCIWNSHLYV*ILKDAIRRKVR Trigger: CCTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAAATGCACATGGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGGAATGTGGAAATGCATaGCCTCTTGGAGAAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: RPVILQEVEDRKSGQCKLECGNA*PLGEIT Trigger: TGTTATTTCTCCAAGAGGCAATGCATTTCCACATTC...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGAGTGCTCCATTTCACTaGATGTCTGTCTTTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RPVILQEVEDRKSGQCKLSAPFH*MSVFKF Trigger: GAATTTAAAGACAGACATCAAGTGAAATGGAGCACT...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGATGACTGACACTTTGTaGTTGGTCTTCATAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: RPVILQEVEDRKSGQCKLMTDTL*LVFIVH Trigger: ATGTACTATGAAGACCAACAACAAAGTGTCAGTCAT...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | TTTCTCAGTCTTTCTTTGGATTCTGTCTTTAGCTCTTaGTCTGGAGTAAGTTCATTGTCGAATTCAGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLSLSLDSVFSS*SGVSSLSNSAL Trigger: TAGAGCTGAATTCGACAATGAACTTACTCCAGATCAAGAGCTAAAGACAGAATCCAAAGAAAGACTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTGAATGTGGAAATGCATaGCCTCTTGGAGAAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLECGNA*PLGEIT Trigger: TGTTATTTCTCCAAGAGGCAATGCATTTCCACATTC...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTTTTCTCAGTCTTTCTTaGGATTCTGTCTTTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLFLSLS*DSVFSS Trigger: AGAGCTAAAGACAGAATCCAAAGAAAGACTGAGAAA...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATAGTGCTCCATTTCACTaGATGTCTGTCTTTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYSAPFH*MSVFKF Trigger: GAATTTAAAGACAGACATCAAGTGAAATGGAGCACT...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGTTGATGACTGACACTTaGTTGTTGGTCTTCATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLLMTDT*LLVFIV Trigger: TACTATGAAGACCAACAACAAAGTGTCAGTCATCAA...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR TCA 72 bp | GCTGACTTGAAGTTATACTTTGGAAGTTATACATTTTaGGTGGTAGTTGATCAGGAAGTATGTATTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ADLKLYFGSYTF*VVVDQEVCIED Trigger: ATCCTCAATACATACTTCCTGATCAACTACCACTCAAAATGTATAACTTCCAAAGTATAACTTCAAGTCAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATCTTCCAAGGAGAACGTaGCCCCAAGGTAGAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: THGNPPGSASHVLGLQMYLPRRT*PQGRGT Trigger: AGTCCCTCTACCTTGGGGCCACGTTCTCCTTGGAAG...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGGAGCCAGGCAGGCTTTaGTCCTGGCAGCTAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEEPGRL*SWQLAR Trigger: CCGGGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTC...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTCAGTGTCTCTATCAGCTGCAGCTAGCCCGGCCCTaGCCTCTGGCCTGTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: APFHLMSVFKFLQCLYQLQLARP*PLACVY Trigger: GTAGACACAGGCCAGAGGCCAGGGCCGGGCTAGCTG...CAGCTGATAGAGACACTGAAGGAATTTAAAGACAGACATCAAGTGAAATGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAAACAACAGGCAGCAGGTaGGAGCCAGGCAGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKCMSGTRTQASLAVRKTTGSR*EPGRLC Trigger: GCAAAGCCTGCCTGGCTCTCACCTGCTGCCTGTTGT...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACCAATTCCTTTTAGGGAATATGAGCCAGGCAGGCTTTaGTCCTGGCAGCTAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVRFLLHSRKPIPFREYEPGRL*SWQLAR Trigger: CCGGGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTC...ATATTCCCTAAAAGGAATTGGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGCAGCTAGCCCGGCCCTaGCCTCTGGCCTGTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPVILQEVEDRKSGQCKLQLARP*PLACVY Trigger: GTAGACACAGGCCAGAGGCCAGGGCCGGGCTAGCTG...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | CTTCGAAGGTTTCCTAGAAGATGGCTCAGCAGTGGTTaGGGGCTAAGTTTACCCTCTGACTCCTTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRFPRRWLSSG*GLSLPSDSLWH Trigger: ATGCCACAAGGAGTCAGAGGGTAAACTTAGCCCCAAACCACTGCTGAGCCATCTTCTAGGAAACCTTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | GATAATTTGTGGGAACCAATTCTCTCCTTCCAGCTTTaGGGTTCTGGGAGGTCAAACCCAGGTGTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DNLWEPILSFQL*GSGRSNPGVRL Trigger: AAGCCTGACACCTGGGTTTGACCTCCCAGAACCCAAAAGCTGGAAGGAGAGAATTGGTTCCCACAAATTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAATGCGAGGATGGGAAATaGCAACAGGCAGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNKCMSGTRTQASLAVRKCEDGK*QQAAGE Trigger: CTCACCTGCTGCCTGTTGTCATTTCCCATCCTCGCA...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTTTCCCACGGTACCTTAGTAAATCACCAAATCCACATCAGAGATTACAGCTGCGAGGATGGGAAATaGCAACAGGCAGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSHGTLVNHQIHIRDYSCEDGK*QQAAGE Trigger: CTCACCTGCTGCCTGTTGTCATTTCCCATCCTCGCA...GCTGTAATCTCTGATGTGGATTTGGTGATTTACTAAGGTACCGTGGGAAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAAGGTGTGCTCTCGGCTTaGCTCTGGGAGGTGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNKCMSGTRTQASLAVRKGVLSA*LWEVSK Trigger: TTTACTCACCTCCCAGAGGCAAGCCGAGAGCACACC...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATACTGGAACCAGTTGTTaGTTATTTCACACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: THGNPPGSASHVLGLQMYTGTSC*LFHTQT Trigger: AGTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGT...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | TCAACAAATTTTGATCAGCTACTACTTTCCCAGTCATaGTGTGGGAGTCACGCTGCCCAGCTCTGCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: STNFDQLLLSQS*CGSHAAQLCFE Trigger: TTCGAAGCAGAGCTGGGCAGCGTGACTCCCACACAATGACTGGGAAAGTAGTAGCTGATCAAAATTTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATACAACAGGCAGCAGGTaGGAGCCAGGCAGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYTTGSR*EPGRLC Trigger: GCAAAGCCTGCCTGGCTCTCACCTGCTGCCTGTTGT...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACCAATTCCTTTTAGGGAATATGGTGTGCTCTCGGCTTaGCTCTGGGAGGTGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKVRFLLHSRKPIPFREYGVLSA*LWEVSK Trigger: TTTACTCACCTCCCAGAGGCAAGCCGAGAGCACACC...ATATTCCCTAAAAGGAATTGGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTCAGTGTCTCTATCAGCTGCATGGTGATGGAGTCTaGCTTGTTTGGTCGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: APFHLMSVFKFLQCLYQLHGDGV*LVWSSP Trigger: GGGAGACGACCAAACAAGCCAGACTCCATCACCATG...CAGCTGATAGAGACACTGAAGGAATTTAAAGACAGACATCAAGTGAAATGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGCTTCCAAGGAGAACGTaGCCCCAAGGTAGAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RPVILQEVEDRKSGQCKLLPRRT*PQGRGT Trigger: AGTCCCTCTACCTTGGGGCCACGTTCTCCTTGGAAG...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | GACTCAAGCATCTTTGGCTGTCAGGAAATTCCTGTCTaGGATAAATTCCCAAGCCATCCAGATCACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSIFGCQEIPV*DKFPSHPDHFW Trigger: CCAGAAGTGATCTGGATGGCTTGGGAATTTATCCAAGACAGGAATTTCCTGACAGCCAAAGATGCTTGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGGATGAAATAGTCTCCTaGCTCTGGGATCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPVILQEVEDRKSGQCKLDEIVS*LWDHQG Trigger: TCCCTGGTGATCCCAGAGTCAGGAGACTATTTCATC...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACCAATTCCTTTTAGGGAATATCCTCTGCCATCCTTCTaGTGTCTTGGAGAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVRFLLHSRKPIPFREYPLPSF*CLGETS Trigger: AGAAGTCTCTCCAAGACAGCAGAAGGATGGCAGAGG...ATATTCCCTAAAAGGAATTGGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | GGAGTCAGACTGGAGTCATTGATAAAGCATCCTCAATaGACCAGTGAGCATTACTCTCAAGGTTTTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRLESLIKHPQ*TSEHYSQGFRP Trigger: AGGTCTAAAACCTTGAGAGTAATGCTCACTGGTCAATTGAGGATGCTTTATCAATGACTCCAGTCTGACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTTTGCATGGGAATACTTAGTATCTTGGAAACAGAAATGCTGGTTTGAGCCAAGGAGATGTCACTaGCGTTTACCATTAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFAWEYLVSWKQKCWFEPRRCH*RLPLVC Trigger: ACAGACTAATGGTAAACGTCAGTGACATCTCCTTGG...CTCAAACCAGCATTTCTGTTTCCAAGATACTAAGTATTCCCATGCAAACAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | AGACCTGTGATACTTCAAGAAGTTGAAGACAGAAAAAGTGGCCAATGTAAGTTGTGTAGAGCAGAGAGCTaGTTTTTCAGATGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPVILQEVEDRKSGQCKLCRAES*FFRCGA Trigger: AGCACCACATCTGAAAAATCAGCTCTCTGCTCTACA...CAACTTACATTGGCCACTTTTTCTGTCTTCAACTTCTTGAAGTATCACAGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTGATGAAATAGTCTCCTaGCTCTGGGATCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLDEIVS*LWDHQG Trigger: TCCCTGGTGATCCCAGAGTCAGGAGACTATTTCATC...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTGTAAACTTGCTGTGGTaGAGGCTCAGATCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLVNLLW*RLRSLF Trigger: GAAGAGAGATCTGAGCCTTCACCACAGCAAGTTTAC...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTCTCAGGGTAGCTGTCTaGTACCTTGGTGATAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLLRVAV*YLGDNH Trigger: ATGGTTATCACCAAGGTAGCAGACAGCTACCCTGAG...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAATTTCAGATGTGGTGCTaGGGTTTGTTTCTTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNKCMSGTRTQASLAVRKFQMWC*GLFLNC Trigger: ACAATTAAGAAACAAACCCCAGCACCACATCTGAAA...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTTGTAGAGCAGAGAGCTaGTTTTTCAGATGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLCRAES*FFRCGA Trigger: AGCACCACATCTGAAAAATCAGCTCTCTGCTCTACA...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTCCAAGGAGATGTCACTaGCGTTTACCATTAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGKCFPISLCCSIFSCPRRCH*RLPLVC Trigger: ACAGACTAATGGTAAACGTCAGTGACATCTCCTTGG...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | ATGTTCCATGTGCATTTGGAATTCCCACTTGTATGTTaGGATACTAAAGGATGCAATCAGAAGAAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MFHVHLEFPLVC*DTKGCNQKKGE Trigger: CTCACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAAATGCACATGGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTACTGGAACCAGTTGTTaGTTATTTCACACACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLTGTSC*LFHTQT Trigger: AGTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGT...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTTGCTCAATATTCTCATGTTTTCAGATGTGGTGCTaGGGTTTGTTTCTTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGKCFPISLCCSIFSCFQMWC*GLFLNC Trigger: ACAATTAAGAAACAAACCCCAGCACCACATCTGAAA...ACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| 3UTR CAA 72 bp | GCTACTTTTGGGCAAGTGTTTTCCTATAAGTCTATGTaGCTCAATATTCTCATGTTCCATGAAGATATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ATFGQVFSYKSM*LNILMFHEDIC Trigger: GCATATATCTTCATGGAACATGAGAATATTGAGCAACATAGACTTATAGGAAAACACTTGCCCAAAAGTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTATTTTTCAGATGTGGTaGTGGGGTTTGTTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLIFQMW*WGLFLN Trigger: ATTAAGAAACAAACCCCAGCACCACATCTGAAAAAT...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS GCA 90 bp | CACTTCCACTGGGACTCCTTCTCCGAAGCCCAACCCCAGCTCCTCTaGCATCCTTCTGCTGTCTTGGAGAGACTTCTGATCCCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HFHWDSFSEAQPQLL*HPSAVLERLLIPSD Trigger: GTCAGAAGGGATCAGAAGTCTCTCCAAGACAGCAGAAGGATGGCAGAGGAGCTGGGGTTGGGCTTCGGAGAAGGAGTCCCAGTGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| CDS GCA 90 bp | CCAAGGAGAACGTGGCCCCAAGGTAGAGGGACTGGAACCAGTTGTTaGTTATTTCACACACAGACTTGGACCCTGTTAGTAGGCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRTWPQGRGTGTSC*LFHTQTWTLLVGGQ Trigger: CTGCCCGCCTACTAACAGGGTCCAAGTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGTCCCTCTACCTTGGGGCCACGTTCTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATGTGATGGAGTCTGGCTaGTTTGGTCGTCTCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: THGNPPGSASHVLGLQMYVMESG*FGRLPR Trigger: TCGGGGGAGACGACCAAACAAGCCAGACTCCATCAC...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS CCA 90 bp | AGGGTAGCTGTCTGCTACCTTGGTGATAACCATGGTGATGGAGTCTaGCTTGTTTGGTCGTCTCCCCCGACTGATGTCACCACACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVAVCYLGDNHGDGV*LVWSSPPTDVTTHR Trigger: TCTGTGTGTGGTGACATCAGTCGGGGGAGACGACCAAACAAGCCAGACTCCATCACCATGGTTATCACCAAGGTAGCAGACAGCTACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | CAAAATAAATGCATGTCAGGCACAAGGACTCAAGCATCTTTGGCTGTCAGGAAAAGAGCCAGGCAGGCTTaGCTCCTGGCAGCTAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QNKCMSGTRTQASLAVRKRARQA*LLAASP Trigger: CGGGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTCT...TTTCCTGACAGCCAAAGATGCTTGAGTCCTTGTGCCTGACATGCATTTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | ACTCACGGCAATCCTCCTGGCTCAGCATCCCATGTGCTGGGTTTACAGATGTATGACTGGAACCAGTTGTaGCTTATTTCACACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: THGNPPGSASHVLGLQMYDWNQL*LISHTD Trigger: GTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGTC...ATACATCTGTAAACCCAGCACATGGGATGCTGAGCCAGGAGGATTGCCGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS TCA 90 bp | TGTGGTCCCTCGGAATGTGATCTGGGAGTAGATGAAATAGTCTCCTaGCTCTGGGATCACCAGGGATTTGTTGATGTACTTCATCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CGPSECDLGVDEIVS*LWDHQGFVDVLHPV Trigger: AACGGGATGAAGTACATCAACAAATCCCTGGTGATCCCAGAGTCAGGAGACTATTTCATCTACTCCCAGATCACATTCCGAGGGACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAATTAGTAATGTTTGATGCTGCCTTCATGACAGCATATGTATGTATGTATAGAGCCAGGCAGGCTTaGCTCCTGGCAGCTAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQLVMFDAAFMTAYVCMYRARQA*LLAASP Trigger: CGGGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTCT...ATACATACATACATATGCTGTCATGAAGGCAGCATCAAACATTACTAATTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCAATATTCTCATGTTCCATGAAGATATATGCAGGCAGAGAGAGCATCTCAGTGATGGAGTCTGGCTaGTTTGGTCGTCTCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CSIFSCSMKIYAGRESISVMESG*FGRLPR Trigger: TCGGGGGAGACGACCAAACAAGCCAGACTCCATCAC...TGAGATGCTCTCTCTGCCTGCATATATCTTCATGGAACATGAGAATATTGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTCCCACTTGTATGTTTGGATACTAAAGGATGCAATCAGAAGAAAGGTTACTTCATCCCGTTCTaGGTGAAGGCCATCCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEFPLVCLDTKGCNQKKGYFIPF*VKAIPR Trigger: CCTAGGGATGGCCTTCACCAAGAACGGGATGAAGTA...ACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTTACTTCATCCCGTTCTaGGTGAAGGCCATCCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLYFIPF*VKAIPR Trigger: CCTAGGGATGGCCTTCACCAAGAACGGGATGAAGTA...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTCCCACTTGTATGTTTGGATACTAAAGGATGCAATCAGAAGAAAGGTGGGATCACCAGGGATTaGTTGATGTACTTCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LEFPLVCLDTKGCNQKKGGITRD*LMYFIP Trigger: CGGGATGAAGTACATCAACAAATCCCTGGTGATCCC...ACCTTTCTTCTGATTGCATCCTTTAGTATCCAAACATACAAGTGGGAATTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGTGAGGTTTCTCCTTCACAGCAGAAAACCAATTCCTTTTAGGGAATATATGTGGTGCTGGGGTTaGTTTCTTAATTGTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKVRFLLHSRKPIPFREYMWCWG*FLNCQV Trigger: CACCTGACAATTAAGAAACAAACCCCAGCACCACAT...ATATTCCCTAAAAGGAATTGGTTTTCTGCTGTGAAGGAGAAACCTCACCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | AATGACTTTAAGACGAAAATCGTGTACGTTTGCTTATCTGTTTACTTGCTACTGGGGATCACCAGGGATTaGTTGATGTACTTCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NDFKTKIVYVCLSVYLLLGITRD*LMYFIP Trigger: CGGGATGAAGTACATCAACAAATCCCTGGTGATCCC...CAGTAGCAAGTAAACAGATAAGCAAACGTACACGATTTTCGTCTTAAAGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTCATCCTTCTGCTGTCTaGGAGAGACTTCTGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLHPSAV*ERLLIP Trigger: AGGGATCAGAAGTCTCTCCAAGACAGCAGAAGGATG...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239480.2 |
||
| CDS-3UTR CAA 90 bp | ATCAAGTGTTTCTACAGTGCTCCATTTCACTTGATGTCTGTCTTTAAATTCCTTGACTGGAACCAGTTGTaGCTTATTTCACACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKCFYSAPFHLMSVFKFLDWNQL*LISHTD Trigger: GTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGTC...AAGGAATTTAAAGACAGACATCAAGTGAAATGGAGCACTGTAGAAACACTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS CAA 72 bp | AATGACAACAGGCAGCAGGTGAGAGCCAGGCAGGCTTaGCTCCTGGCAGCTAGCCCGGCCCTGGCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NDNRQQVRARQA*LLAASPALASG Trigger: GCCAGAGGCCAGGGCCGGGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTCTCACCTGCTGCCTGTTGTCATT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
||
| CDS TCA 72 bp | GTCCTGCGAGGATGGGAAATGACAACAGGCAGCAGGTaGGAGCCAGGCAGGCTTTGCTCCTGGCAGCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: VLRGWEMTTGSR*EPGRLCSWQLA Trigger: GGCTAGCTGCCAGGAGCAAAGCCTGCCTGGCTCTCACCTGCTGCCTGTTGTCATTTCCCATCCTCGCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS CCA 72 bp | CTTGCTGTGGTGAAGGCTCAGATCTCTCTTCTGTTATaGCCCGAAGCATACAGTCTTTTCCGGGGACCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LAVVKAQISLLL*PEAYSLFRGPG Trigger: TCCGGGTCCCCGGAAAAGACTGTATGCTTCGGGCCATAACAGAAGAGAGATCTGAGCCTTCACCACAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS CCA 72 bp | GTCTGCTACCTTGGTGATAACCATGGTGATGGAGTCTaGCTTGTTTGGTCGTCTCCCCCGACTGATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: VCYLGDNHGDGV*LVWSSPPTDVT Trigger: GGTGACATCAGTCGGGGGAGACGACCAAACAAGCCAGACTCCATCACCATGGTTATCACCAAGGTAGCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS CAA 72 bp | GCTACCTTGGTGATAACCATGGTGATGGAGTCTGGCTaGTTTGGTCGTCTCCCCCGACTGATGTCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: ATLVITMVMESG*FGRLPRLMSPH Trigger: GTGTGGTGACATCAGTCGGGGGAGACGACCAAACAAGCCAGACTCCATCACCATGGTTATCACCAAGGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS GCA 72 bp | ACGTGGCCCCAAGGTAGAGGGACTGGAACCAGTTGTTaGTTATTTCACACACAGACTTGGACCCTGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: TWPQGRGTGTSC*LFHTQTWTLLV Trigger: TACTAACAGGGTCCAAGTCTGTGTGTGAAATAAGCAACAACTGGTTCCAGTCCCTCTACCTTGGGGCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS CAA 72 bp | AGCAGAGAGCTGATTTTTCAGATGTGGTGCTGGGGTTaGTTTCTTAATTGTCAGGTGTGCTCTCGGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRELIFQMWCWG*FLNCQVCSRLA Trigger: GGCAAGCCGAGAGCACACCTGACAATTAAGAAACAAACCCCAGCACCACATCTGAAAAATCAGCTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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| CDS TCA 72 bp | TCGGAATGTGATCTGGGAGTAGATGAAATAGTCTCCTaGCTCTGGGATCACCAGGGATTTGTTGATGTACTT | + |
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Preference number: 6 (lower is better) Translates to: SECDLGVDEIVS*LWDHQGFVDVL Trigger: AAGTACATCAACAAATCCCTGGTGATCCCAGAGTCAGGAGACTATTTCATCTACTCCCAGATCACATTCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062246.8 ENSMUST00000239480.2 |
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