Pregenerated sensors for TNFSF13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031497Ensembl transcript IDs: ENSMUST00000033892.9, ENSMUST00000207792.3, ENSMUST00000208683.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTCGCGATGCCAGCCGAGTAGCAGGAATTGTTGGGCAGTGTTTTaGGCATATTCTGAATACATCGGAACAGGGTCACCAGGCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: ASRCQPSSRNCWAVF*AYSEYIGTGSPGSA Trigger: AGCTGAGCCTGGTGACCCTGTTCCGATGTATTCAGAATATGCCCAAAACACTGCCCAACAATTCCTGCTACTCGGCTGGCATCGCGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CCA 90 bp | CTCCTTCTTCCAGCCTCGCGATGCCAGCCGAGTAGCAGGAATTGTTaGGCAGTGTTTTGGGCATATTCTGAATACATCGGAACAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LLLPASRCQPSSRNC*AVFWAYSEYIGTGS Trigger: TGACCCTGTTCCGATGTATTCAGAATATGCCCAAAACACTGCCCAACAATTCCTGCTACTCGGCTGGCATCGCGAGGCTGGAAGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CCA 90 bp | AGCGCGGGCTCCGTTTCTCATAACTCACATGGCACACTTCGGTTGTaGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTC | + |
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Preference number: 1 (lower is better) Translates to: SAGSVSHNSHGTLRL*LSVIFPGLDQIQRV Trigger: GACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCCATGTGAGTTATGAGAAACGGAGCCCGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR CCA 90 bp | AATAGGGCAGATGCTTCCTTCTGGAATCTAACCCCTAATCTGCAATaGCAGCAGCAGCCACATACTGAACAGGGAGGAAATCTCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: NRADASFWNLTPNLQ*QQQPHTEQGGNLCS Trigger: AGAGCAGAGATTTCCTCCCTGTTCAGTATGTGGCTGCTGCTGCCATTGCAGATTAGGGGTTAGATTCCAGAAGGAAGCATCTGCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | GACCAAACGGTGTTGGCAATGGTCAGAAGGCATGGTGCTTTTATTTaGCAATCAACCATAGCAGTAGAGCTAGGGAGGTCACTAGCCACT | + |
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Preference number: 1 (lower is better) Translates to: DQTVLAMVRRHGAFI*QSTIAVELGRSLAT Trigger: AGTGGCTAGTGACCTCCCTAGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | GTGGATGTTGGCAGACCAAACGGTGTTGGCAATGGTCAGAAGGCATaGTGCTTTTATTTGGCAATCAACCATAGCAGTAGAGCTAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VDVGRPNGVGNGQKA*CFYLAINHSSRARE Trigger: CTCCCTAGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCCAACATCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR TCA 90 bp | CTCTTCTCATGGCAAATCGCAAAACAAGGAAATCTCCCTGCATTCTaGACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGGTGCGTGT | + |
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Preference number: 1 (lower is better) Translates to: LFSWQIAKQGNLPAF*TCVTQGKKQGCGAC Trigger: ACACGCACCGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTCCTTGTTTTGCGATTTGCCATGAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR CCA 90 bp | ACAGGCCCTTCTCAAAGGATGAAGCTGGCCCGGCCAATAAACACATaGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: TGPSQRMKLARPINT*NIFNIPSHQRNANR Trigger: TCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATGTGTTTATTGGCCGGGCCAGCTTCATCCTTTGAGAAGGGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | GAGTGGGCTAACCATTTCTCAACACCAGTTCATTCAACCCATAACTaGGGGAATCTTCTCCTGTCTCTGTTTCTACAGTGTTTCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: EWANHFSTPVHSTHN*GNLLLSLFLQCFTG Trigger: ACCTGTGAAACACTGTAGAAACAGAGACAGGAGAAGATTCCCCCAGTTATGGGTTGAATGAACTGGTGTTGAGAAATGGTTAGCCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR TCA 90 bp | GCAGAGGGGAACTCTTACTGCCAGTGGCAGAAATGGTCTAGAAACTaGTCTAGAAACTGGAAATCAGTGTGCAGGTTACAGAGAAAACTA | + |
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Preference number: 1 (lower is better) Translates to: AEGNSYCQWQKWSRN*SRNWKSVCRLQRKL Trigger: TAGTTTTCTCTGTAACCTGCACACTGATTTCCAGTTTCTAGATCAGTTTCTAGACCATTTCTGCCACTGGCAGTAAGAGTTCCCCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | CTCTTTCTCCTCCAAGGCATTTCCTCTTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCAAGCATCAGCCACGCTGGACTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LFLLQGISSFKAEKP*NKCVSSSISHAGLN Trigger: ATTCAGTCCAGCGTGGCTGATGCTTGAACTTACACATTTGTTCCATGGCTTCTCAGCTTTAAAAGAGGAAATGCCTTGGAGGAGAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR TCA 90 bp | TTTCCTGCCCCTTTCCTGAAGGAATGCATGAGCTCCAGACATGATTaGATATTTAAGGCTTTGTGTAGAGAAGTATGCCATCTGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: FPAPFLKECMSSRHD*IFKALCREVCHLQT Trigger: TGTTTGCAGATGGCATACTTCTCTACACAAAGCCTTAAATATTCAATCATGTCTGGAGCTCATGCATTCCTTCAGGAAAGGGGCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | TACAGTGTTTCACAGGTGTTCTTGCAGAGCTGTCCTCTGCTTGGCTaGGCATATTCTTGGGCTTTGATTGTTCTTGTTCTTTTTGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: YSVSQVFLQSCPLLG*AYSWALIVLVLFVF Trigger: AAAAACAAAAAGAACAAGAACAATCAAAGCCCAAGAATATGCCCAGCCAAGCAGAGGACAGCTCTGCAAGAACACCTGTGAAACACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR TCA 90 bp | ATGCCATCTGCAAACAGGTGTACTCCGACTTTTTCCTTTCCTATTTaGATCCCCTTTATTCGCTGTTCTGGTTTAGAATTCAAGTACAAT | + |
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Preference number: 1 (lower is better) Translates to: MPSANRCTPTFSFPI*IPFIRCSGLEFKYN Trigger: ATTGTACTTGAATTCTAAACCAGAACAGCGAATAAAGGGGATTCAAATAGGAAAGGAAAAAGTCGGAGTACACCTGTTTGCAGATGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR GCA 90 bp | GACATGATTGAATATTTAAGGCTTTGTGTAGAGAAGTATGCCATCTaGAAACAGGTGTACTCCGACTTTTTCCTTTCCTATTTGAATCCC | + |
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Preference number: 1 (lower is better) Translates to: DMIEYLRLCVEKYAI*KQVYSDFFLSYLNP Trigger: GGGATTCAAATAGGAAAGGAAAAAGTCGGAGTACACCTGTTTGCAGATGGCATACTTCTCTACACAAAGCCTTAAATATTCAATCATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CCA 90 bp | TTCCATCGAATACCATCTGATATCATGGTTCATTTCGATCTGGCTTaGTTTGTTTATCTAGGGTCATTTGTGTTTCCATCTGATTTATGT | + |
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Preference number: 1 (lower is better) Translates to: FHRIPSDIMVHFDLA*FVYLGSFVFPSDLC Trigger: ACATAAATCAGATGGAAACACAAATGACCCTAGATAAACAAACCAAGCCAGATCGAAATGAACCATGATATCAGATGGTATTCGATGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | AGGTGTCGTCTCCGTTGCGTGAAATCTGTGCATTCTCCCGAGGAATaGCAAGCTGAATCTCATCTCCTTCTTCCAGCCTCGCGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RCRLRCVKSVHSPEE*QAESHLLLPASRCQ Trigger: CTGGCATCGCGAGGCTGGAAGAAGGAGATGAGATTCAGCTTGCAATTCCTCGGGAGAATGCACAGATTTCACGCAACGGAGACGACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCACATACTGAACAGGGAGGAAATCTCTGCTCTGCCACAAACACACGCTCAAAAAGCAAGGTTGCGGTaGGTGTTGGCAAAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SHILNREEISALPQTHAQKARLR*VLAKDW Trigger: CCAGTCCTTTGCCAACACGCACCGCAACCTTGCTTT...TTGAGCGTGTGTTTGTGGCAGAGCAGAGATTTCCTCCCTGTTCAGTATGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | CTGAGCGCGGGCTCCGTTTCTCATAACTCACATGGCACACTTCGGTaGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGG | + |
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Preference number: 2 (lower is better) Translates to: LSAGSVSHNSHGTLR*WLSVIFPGLDQIQR Trigger: CCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCCATGTGAGTTATGAGAAACGGAGCCCGCGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGCTCGTCCCCAAAGACGTGTACTTTCTTCCTCTGGATGACATGACCCATGAACCTGGCTGTAGATaGAGAAATAGCCTGTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: AQLVPKDVYFLPLDDMTHEPGCR*RNSLFA Trigger: GGCAAACAGGCTATTTCTTCATCTACAGCCAGGTTC...ATGGGTCATGTCATCCAGAGGAAGAAAGTACACGTCTTTGGGGACGAGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CAA 90 bp | AGACCAAACGGTGTTGGCAATGGTCAGAAGGCATGGTGCTTTTATTaGGCAATCAACCATAGCAGTAGAGCTAGGGAGGTCACTAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RPNGVGNGQKAWCFY*AINHSSRAREVTSH Trigger: GTGGCTAGTGACCTCCCTAGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | GGAATCTTCTCCTGTCTCTGTTTCTACAGTGTTTCACAGGTGTTCTaGCAGAGCTGTCCTCTGCTTGGCTGGGCATATTCTTGGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GIFSCLCFYSVSQVF*QSCPLLGWAYSWAL Trigger: CAAAGCCCAAGAATATGCCCAGCCAAGCAGAGGACAGCTCTGCAAGAACACCTGTGAAACACTGTAGAAACAGAGACAGGAGAAGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTCCCTGCATTCTGAACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGCGAGGAATTGCAAGCTaGATCTCATCTCCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: EISLHSEHVSPKAKSKVARGIAS*ISSPSS Trigger: GGAAGAAGGAGATGAGATTCAGCTTGCAATTCCTCG...CGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CAA 90 bp | GATAAGAGAGAGGATTCCCTACTCCCACCATTTAACAAGGTGTGTTaGTATCCATGTGCCCTGTGCACACACATTCCATGTGGGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: DKREDSLLPPFNKVC*YPCALCTHIPCGWI Trigger: AATCCACCCACATGGAATGTGTGTGCACAGGGCACATGGATACAAACACACCTTGTTAAATGGTGGGAGTAGGGAATCCTCTCTCTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAGAGTTGTATAGAGAAATACCAAAAGTGGATGTTGGCAGACCAAACGGTGCAGCAGCCACATACTaGACAGGGAGGAAATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KLELYREIPKVDVGRPNGAAATY*TGRKSL Trigger: CAGAGATTTCCTCCCTGTTCAGTATGTGGCTGCTGC...ACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACAACTCTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR GCA 90 bp | CATGGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGAACCACAGGAGGGGAACTCTTACTaGCAGTGGCAGAAATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: HGTYSTFPVTREMQIEPQEGNSY*QWQKWS Trigger: AGACCATTTCTGCCACTGGCAGTAAGAGTTCCCCTC...CTGTGGTTCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | TGTATAGAGAAATACCAAAAGTGGATGTTGGCAGACCAAACGGTGTaGGCAATGGTCAGAAGGCATGGTGCTTTTATTTGGCAATCAACC | + |
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Preference number: 2 (lower is better) Translates to: CIEKYQKWMLADQTV*AMVRRHGAFIWQST Trigger: GGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGAACCACAGGTGTTGGCAAAGGACTaGAGAAAACGGTCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGTYSTFPVTREMQIEPQVLAKD*RKRSSS Trigger: TGAGGAAGACCGTTTTCTCCAGTCCTTTGCCAACAC...CTGTGGTTCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGATGTTGTTGTTGTTCTCAGTGTGTTTGCCATTGGTCTACAGGAAGTCAAACGGTGTTGGCAATaGTCAGAAGGCATGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FSDVVVVLSVFAIGLQEVKRCWQ*SEGMVL Trigger: AAGCACCATGCCTTCTGACCATTGCCAACACCGTTT...GACTTCCTGTAGACCAATGGCAAACACACTGAGAACAACAACAACATCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | GTTCTGTTGGCAGTTGAGAATAGGATTGTTTTTCTGATGTTGTTGTaGTTCTCAGTGTGTTTGCCATTGGTCTACAGGAAGTCTACTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLLAVENRIVFLMLL*FSVCLPLVYRKSTE Trigger: CTCAGTAGACTTCCTGTAGACCAATGGCAAACACACTGAGAACAACAACAACATCAGAAAAACAATCCTATTCTCAACTGCCAACAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCAGTAGCAGGAATTGTTaGGCAGTGTTTTGGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: VCYISWFGSDSTGHEKTFSSRNC*AVFWAY Trigger: ATATGCCCAAAACACTGCCCAACAATTCCTGCTACT...GAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCTATTTGAATCCCCTTTATTCGCTGTTCTGGTTTAGAATTCAAGTACAAACCCCTAATCTGCAATaGCAGCAGCAGCCACATACT | + |
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Preference number: 2 (lower is better) Translates to: LSYLNPLYSLFWFRIQVQTPNLQ*QQQPHT Trigger: AGTATGTGGCTGCTGCTGCCATTGCAGATTAGGGGT...TTGTACTTGAATTCTAAACCAGAACAGCGAATAAAGGGGATTCAAATAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | TATGCCATCTGCAAACAGGTGTACTCCGACTTTTTCCTTTCCTATTaGAATCCCCTTTATTCGCTGTTCTGGTTTAGAATTCAAGTACAA | + |
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Preference number: 2 (lower is better) Translates to: YAICKQVYSDFFLSY*NPLYSLFWFRIQVQ Trigger: TTGTACTTGAATTCTAAACCAGAACAGCGAATAAAGGGGATTCAAATAGGAAAGGAAAAAGTCGGAGTACACCTGTTTGCAGATGGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCTTATATTTCCTGGTTTaGATCAGATTCAACGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VCYISWFGSDSTGHEKTFLYFLV*IRFNGS Trigger: TGACCCGTTGAATCTGATCCAAACCAGGAAATATAA...GAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAGATTCCATTTCACTCTAGCCAAATTAATCTGTCATCAAAACAGGGGTAATTCTTTCCTTCTGTaGAAAATACCTCGACATCAG | + |
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Preference number: 2 (lower is better) Translates to: TVRFHFTLAKLICHQNRGNSFLL*KIPRHQ Trigger: CTGATGTCGAGGTATTTTTCACAGAAGGAAAGAATT...ACCCCTGTTTTGATGACAGATTAATTTGGCTAGAGTGAAATGGAATCTCACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR-3UTR CCA 90 bp | AACCACAGTGAGATTCCATTTCACTCTAGCCAAATTAATCTGTCATCAAAACAGAATGGTCAGAAGGCATaGTGCTTTTATTTGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: NHSEIPFHSSQINLSSKQNGQKA*CFYLAI Trigger: GATTGCCAAATAAAAGCACCATGCCTTCTGACCATT...CTGTTTTGATGACAGATTAATTTGGCTAGAGTGAAATGGAATCTCACTGTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 90 bp | TTATTTCATCTGAAATGCTTCTCACCTGATTTTTCAAAGTTAGAGTaGTATAGAGAAATACCAAAAGTGGATGTTGGCAGACCAAACGGT | + |
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Preference number: 2 (lower is better) Translates to: LFHLKCFSPDFSKLE*YREIPKVDVGRPNG Trigger: ACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACAACTCTAACTTTGAAAAATCAGGTGAGAAGCATTTCAGATGAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR TCA 72 bp | TCTCTAGGCCCTTGCCAGAGAAGCCTCTATCTGCAGTaGATGGTGATTAGCCTAGAGGCCCATTCTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLGPCQRSLYLQ*MVISLEAHSGQ Trigger: TTGGCCAGAATGGGCCTCTAGGCTAATCACCATTCACTGCAGATAGAGGCTTCTCTGGCAAGGGCCTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR GCA 72 bp | CAAGCTGAATCTCATCTCCTTCTTCCAGCCTCGCGATaGCAGCCGAGTAGCAGGAATTGTTGGGCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QAESHLLLPASR*QPSSRNCWAVF Trigger: AAACACTGCCCAACAATTCCTGCTACTCGGCTGGCATCGCGAGGCTGGAAGAAGGAGATGAGATTCAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CCA 72 bp | CCAGCCTCGCGATGCCAGCCGAGTAGCAGGAATTGTTaGGCAGTGTTTTGGGCATATTCTGAATACATCGGA | + |
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Preference number: 3 (lower is better) Translates to: PASRCQPSSRNC*AVFWAYSEYIG Trigger: TCCGATGTATTCAGAATATGCCCAAAACACTGCCCAACAATTCCTGCTACTCGGCTGGCATCGCGAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR TCA 72 bp | CGTGAAATCTGTGCATTCTCCCGAGGAATTGCAAGCTaGATCTCATCTCCTTCTTCCAGCCTCGCGATGCCA | + |
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Preference number: 3 (lower is better) Translates to: REICAFSRGIAS*ISSPSSSLAMP Trigger: TGGCATCGCGAGGCTGGAAGAAGGAGATGAGATTCAGCTTGCAATTCCTCGGGAGAATGCACAGATTTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR GCA 72 bp | AACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGGTaGGTGTTGGCAAAGGACTGGAGAAAACGGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: NMCHPRQKARLR*VLAKDWRKRSS Trigger: GGAAGACCGTTTTCTCCAGTCCTTTGCCAACACGCACCGCAACCTTGCTTTTTGCCTTGGGTGACACATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR CCA 72 bp | TGCCAGCCGAGTAGCAGGAATTGTTGGGCAGTGTTTTaGGCATATTCTGAATACATCGGAACAGGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: CQPSSRNCWAVF*AYSEYIGTGSP Trigger: TGGTGACCCTGTTCCGATGTATTCAGAATATGCCCAAAACACTGCCCAACAATTCCTGCTACTCGGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR CCA 72 bp | TGCTTCAGTGACCTGCAGTTGTGGGCCCTCTTCTCATaGCAAATCGCAAAACAAGGAAATCTCCCTGCATTC | + |
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Preference number: 3 (lower is better) Translates to: CFSDLQLWALFS*QIAKQGNLPAF Trigger: GAATGCAGGGAGATTTCCTTGTTTTGCGATTTGCCATGAGAAGAGGGCCCACAACTGCAGGTCACTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| 3UTR CCA 72 bp | GCCACAAACACACGCTCAAAGCAGAGCTTATGTGAGTaGCTACAGCTTCTCGTTAGTGACCTCTGTGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: ATNTRSKQSLCE*LQLLVSDLCAD Trigger: ATCTGCACAGAGGTCACTAACGAGAAGCTGTAGCCACTCACATAAGCTCTGCTTTGAGCGTGTGTTTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR TCA 72 bp | TCCCCAAAGACGTGTACTTTCTTCCTCTGGATGACATaGCCCATAGCAAAGATGGGGTCCGTGTATAGAACC | + |
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Preference number: 3 (lower is better) Translates to: SPKTCTFFLWMT*PIAKMGSVYRT Trigger: GGTTCTATACACGGACCCCATCTTTGCTATGGGTCATGTCATCCAGAGGAAGAAAGTACACGTCTTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
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| 3UTR GCA 72 bp | CAGCACAGGCAAGCACTTTCTGAACAGCACTCTGGTTaGTCAGGAAATAGCCCATCAGCTGAAAATGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: QHRQALSEQHSG*SGNSPSAENGI Trigger: AATCCCATTTTCAGCTGATGGGCTATTTCCTGAGCAACCAGAGTGCTGTTCAGAAAGTGCTTGCCTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | GATGCTTCCTTCTGGAATCTAACCCCTAATCTGCAATaGCAGCAGCAGCCACATACTGAACAGGGAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DASFWNLTPNLQ*QQQPHTEQGGN Trigger: ATTTCCTCCCTGTTCAGTATGTGGCTGCTGCTGCCATTGCAGATTAGGGGTTAGATTCCAGAAGGAAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGTGTTTTGGGCATATTCTGAATACATCGGAACAGGGTCACCAGGCTCAGGTTATATTTCCTGGTTaGGATCAGATTCAACGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GQCFGHILNTSEQGHQAQVIFPG*DQIQRV Trigger: GACCCGTTGAATCTGATCCAAACCAGGAAATATAAC...CTGAGCCTGGTGACCCTGTTCCGATGTATTCAGAATATGCCCAAAACACTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
||
| 3UTR GCA 72 bp | GATTCTGAGACAGGATCCTCACATGGGGCACATATTTaGTTCATCTCGATGTCAGATGCTACGAAGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSETGSSHGAHI*FISMSDATKLA Trigger: AGCAAGCTTCGTAGCATCTGACATCGAGATGAAGCAAATATGTGCCCCATGTGAGGATCCTGTCTCAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | GTGTTGGCAATGGTCAGAAGGCATGGTGCTTTTATTTaGCAATCAACCATAGCAGTAGAGCTAGGGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLAMVRRHGAFI*QSTIAVELGRS Trigger: TGACCTCCCTAGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | GGCAGACCAAACGGTGTTGGCAATGGTCAGAAGGCATaGTGCTTTTATTTGGCAATCAACCATAGCAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRPNGVGNGQKA*CFYLAINHSSR Trigger: TCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGAACCACAGAGGTTGCGGTGCGTGTaGGCAAAGGACTGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HGTYSTFPVTREMQIEPQRLRCV*AKDWRK Trigger: TTTTCTCCAGTCCTTTGCCAACACGCACCGCAACCT...CTGTGGTTCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR TCA 72 bp | TGGCAAATCGCAAAACAAGGAAATCTCCCTGCATTCTaGACATGTGTCACCCAAGGCAAAAAGCAAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: WQIAKQGNLPAF*TCVTQGKKQGC Trigger: GCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTCCTTGTTTTGCGATTTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR GCA 72 bp | AGACCAAACGGTGTTGGCAATGGTCAGAAGGCATGGTaGTTTTATTTGGCAATCAACCATAGCAGTAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPNGVGNGQKAW*FYLAINHSSRA Trigger: AGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | TGGCACACTTCGGTTGTGGCTGTCTGTTATATTTCCTaGTTTGGATCAGATTCAACGGGTCACGAGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: WHTSVVAVCYIS*FGSDSTGHEKT Trigger: AGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR CCA 72 bp | AATACCAAAAGTGGATGTTGGCAGACCAAACGGTGTTaGCAATGGTCAGAAGGCATGGTGCTTTTATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NTKSGCWQTKRC*QWSEGMVLLFG Trigger: GCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCCAACATCCACTTTTGGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR GCA 72 bp | CTTCTCATGGCAAATCGCAAAACAAGGAAATCTCCCTaGATTCTGAACATGTGTCACCCAAGGCAAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLMANRKTRKSP*ILNMCHPRQKA Trigger: TGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTCCTTGTTTTGCGATTTGCCATGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR GCA 72 bp | TTGGCATCTGAATGGGTTGGCATCATATCTGTAGACTaGTTTGAGTGGGCTAACCATTTCTCAACACCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LASEWVGIISVD*FEWANHFSTPV Trigger: AACTGGTGTTGAGAAATGGTTAGCCCACTCAAAGCAGTCTACAGATATGATGCCAACCCATTCAGATGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | AAAAGTGGATGTTGGCAGACCAAACGGTGTTGGCAATaGTCAGAAGGCATGGTGCTTTTATTTGGCAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: KSGCWQTKRCWQ*SEGMVLLFGNQ Trigger: TTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCCAACATCCACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR GCA 72 bp | CCATTTAACAAGGTGTGTTTGTATCCATGTGCCCTGTaGACACACATTCCATGTGGGTGGATTTATACATTG | + |
|
Preference number: 3 (lower is better) Translates to: PFNKVCLYPCAL*THIPCGWIYTL Trigger: CAATGTATAAATCCACCCACATGGAATGTGTGTGCACAGGGCACATGGATACAAACACACCTTGTTAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | TCCGTTTCTCATAACTCACATGGCACACTTCGGTTGTaGCTGTCTGTTATATTTCCTGGTTTGGATCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SVSHNSHGTLRL*LSVIFPGLDQI Trigger: AATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCCATGTGAGTTATGAGAAACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR TCA 72 bp | CCTTTCCTGAAGGAATGCATGAGCTCCAGACATGATTaGATATTTAAGGCTTTGTGTAGAGAAGTATGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PFLKECMSSRHD*IFKALCREVCH Trigger: ATGGCATACTTCTCTACACAAAGCCTTAAATATTCAATCATGTCTGGAGCTCATGCATTCCTTCAGGAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CCA 72 bp | TTTGTATCCATGTGCCCTGTGCACACACATTCCATGTaGGTGGATTTATACATTGTCACATGTGGAAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FVSMCPVHTHSM*VDLYIVTCGNF Trigger: AAAATTTCCACATGTGACAATGTATAAATCCACCCACATGGAATGTGTGTGCACAGGGCACATGGATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTATTTGAATCCCCTTTATTCGCTGTTCTGGTTTAGAATTCAAGTACAACATGGCACACTTCGGTaGTGGCTGTCTGTTATATTT | + |
|
Preference number: 3 (lower is better) Translates to: LSYLNPLYSLFWFRIQVQHGTLR*WLSVIF Trigger: AAATATAACAGACAGCCACAACCGAAGTGTGCCATG...TTGTACTTGAATTCTAAACCAGAACAGCGAATAAAGGGGATTCAAATAGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCACAGTGAGATTCCATTTCACTCTAGCCAAATTAATCTGTCATCAAAACAGGCATGGTGCTTTTATTaGGCAATCAACCATAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NHSEIPFHSSQINLSSKQAWCFY*AINHSS Trigger: ACTGCTATGGTTGATTGCCAAATAAAAGCACCATGC...CTGTTTTGATGACAGATTAATTTGGCTAGAGTGAAATGGAATCTCACTGTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR GCA 72 bp | GAATATTTAAGGCTTTGTGTAGAGAAGTATGCCATCTaGAAACAGGTGTACTCCGACTTTTTCCTTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: EYLRLCVEKYAI*KQVYSDFFLSY Trigger: ATAGGAAAGGAAAAAGTCGGAGTACACCTGTTTGCAGATGGCATACTTCTCTACACAAAGCCTTAAATATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR TCA 72 bp | GTGGATTTGTATCTTTTTGTTCCATCGAATACCATCTaGTATCATGGTTCATTTCGATCTGGCTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VDLYLFVPSNTI*YHGSFRSGLVC Trigger: ACAAACCAAGCCAGATCGAAATGAACCATGATATCAGATGGTATTCGATGGAACAAAAAGATACAAATCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTTTCACAGAGGCACGGTGGTaGCAGGGTCTTTGCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLDQIQRVTRKLSLTAFTEARW*QGLCRL Trigger: GAGTCTGCAAAGACCCTGCCACCACCGTGCCTCTGT...GAAAGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTTTCCCCATAGCTCTGCAGCTCCATaGGCAGGTTCATCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGSDSTGHEKTFADGFPHSSAAP*AGSSGL Trigger: CAGACCTGATGAACCTGCGCATGGAGCTGCAGAGCT...ATGGGGAAAGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR CAA 72 bp | CTCCGTTGCGTGAAATCTGTGCATTCTCCCGAGGAATaGCAAGCTGAATCTCATCTCCTTCTTCCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRCVKSVHSPEE*QAESHLLLPAS Trigger: CGAGGCTGGAAGAAGGAGATGAGATTCAGCTTGCAATTCCTCGGGAGAATGCACAGATTTCACGCAACGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTTTGCACCCTCCTCCTTCTaGGGAGTGATGGGATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SWFGSDSTGHEKTFADGFAPSSF*GVMGSY Trigger: ATATGATCCCATCACTCCGCAGAAGGAGGAGGGTGC...AAAGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCTCCCTGCATTCTGAACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGGCACCCTCCTCCTTCTaGGGAGTGATGGGATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EISLHSEHVSPKAKSKVAAPSSF*GVMGSY Trigger: ATATGATCCCATCACTCCGCAGAAGGAGGAGGGTGC...CGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | GGCACACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAAGCAGCCTTCCATCCCTaGAGATCCCAAACCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLRLWLSVIFPGLDQIQAAFHP*RSQTRH Trigger: GTGCCTGGTTTGGGATCTGCAGGGATGGAAGGCTGC...TTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTACAGAGGCACGGTGGTaGCAGGGTCTTTGCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVVAVCYISWFGSDSTGTEARW*QGLCRL Trigger: GAGTCTGCAAAGACCCTGCCACCACCGTGCCTCTGT...ACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR CAA 72 bp | ATTCTGAACATGTGTCACCCAAGGCAAAAAGCAAGGTaGCGGTGCGTGTTGGCAAAGGACTGGAGAAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ILNMCHPRQKAR*RCVLAKDWRKR Trigger: CCGTTTTCTCCAGTCCTTTGCCAACACGCACCGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| 3UTR CAA 72 bp | GGTGTTGGCAATGGTCAGAAGGCATGGTGCTTTTATTaGGCAATCAACCATAGCAGTAGAGCTAGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGNGQKAWCFY*AINHSSRAREV Trigger: GACCTCCCTAGCTCTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CAA 72 bp | TCCTGTCTCTGTTTCTACAGTGTTTCACAGGTGTTCTaGCAGAGCTGTCCTCTGCTTGGCTGGGCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLCFYSVSQVF*QSCPLLGWAYS Trigger: AGAATATGCCCAGCCAAGCAGAGGACAGCTCTGCAAGAACACCTGTGAAACACTGTAGAAACAGAGACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CAA 72 bp | CGTGGCATTCATAGATTAAGGCACTTCTCTAGGCCCTaGCCAGAGAAGCCTCTATCTGCAGTGAATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGIHRLRHFSRP*PEKPLSAVNGD Trigger: ATCACCATTCACTGCAGATAGAGGCTTCTCTGGCAAGGGCCTAGAGAAGTGCCTTAATCTATGAATGCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACGCACCCTCCTCCTTCTaGGGAGTGATGGGATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GCLLYFLVWIRFNGSRENAPSSF*GVMGSY Trigger: ATATGATCCCATCACTCCGCAGAAGGAGGAGGGTGC...GTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | GGCACACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACAGGTTCATCAGGTCTaGTTGCAAGGCAGCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GTLRLWLSVIFPGLDQIQQVHQV*LQGSQL Trigger: CAGTTGGCTGCCTTGCAAGCAGACCTGATGAACCTG...TTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGCAGGTTCATCAGGTCTaGTTGCAAGGCAGCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: IFPGLDQIQRVTRKLSLTQVHQV*LQGSQL Trigger: CAGTTGGCTGCCTTGCAAGCAGACCTGATGAACCTG...CGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAAAGCTCTGCAGCTCCATaGGCAGGTTCATCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSVIFPGLDQIQRVTRKSSAAP*AGSSGL Trigger: CAGACCTGATGAACCTGCGCATGGAGCTGCAGAGCT...TTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAAACAAGGACATCGCTGTaGAACTGCTGGACAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSVIFPGLDQIQRVTRKTRTSL*NCWTTG Trigger: CCCTGTTGTCCAGCAGTTTCACAGCGATGTCCTTGT...TTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR TCA 90 bp | CTCGTCCCCAAAGACGTGTACTTTCTTCCTCTGGATGACATGACCCATAGCAAAAGCTGCAGACAGTCTTaGATGATGTTTCTGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPKDVYFLPLDDMTHSKSCRQS*MMFLRF Trigger: GAACCTCAGAAACATCATTCAAGACTGTCTGCAGCT...TTTGCTATGGGTCATGTCATCCAGAGGAAGAAAGTACACGTCTTTGGGGACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTGCAGCCTTCCATCCCTaGAGATCCCAAACCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLLYFLVWIRFNGSRENFAAFHP*RSQTRH Trigger: GTGCCTGGTTTGGGATCTGCAGGGATGGAAGGCTGC...AAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR GCA 90 bp | CATGGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGAACCACAGAGCTCTGCAGCTCCATaGGCAGGTTCATCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGTYSTFPVTREMQIEPQSSAAP*AGSSGL Trigger: CAGACCTGATGAACCTGCGCATGGAGCTGCAGAGCT...CTGTGGTTCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGAGTTGTATAGAGAAATACCAAAAGTGGATGTTGGCAGACCAAACGGTACAGAGGCACGGTGGTaGCAGGGTCTTTGCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLELYREIPKVDVGRPNGTEARW*QGLCRL Trigger: GAGTCTGCAAAGACCCTGCCACCACCGTGCCTCTGT...ACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACAACTCTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
||
| 3UTR CAA 72 bp | GGCTCCGTTTCTCATAACTCACATGGCACACTTCGGTaGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVSHNSHGTLR*WLSVIFPGLDQ Trigger: CTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCCATGTGAGTTATGAGAAACGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCACAAGGACATCGCTGTaGAACTGCTGGACAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCYISWFGSDSTGHEKTFTRTSL*NCWTTG Trigger: CCCTGTTGTCCAGCAGTTTCACAGCGATGTCCTTGT...GAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTGAACCTGGCTGTAGATaGAGAAATAGCCTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVVAVCYISWFGSDSTGEPGCR*RNSLFA Trigger: GGCAAACAGGCTATTTCTTCATCTACAGCCAGGTTC...ACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
||
| CDS-3UTR TCA 90 bp | GGCACACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAAGAACCTGGCTGTAGATaGAGAAATAGCCTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTLRLWLSVIFPGLDQIQEPGCR*RNSLFA Trigger: GGCAAACAGGCTATTTCTTCATCTACAGCCAGGTTC...TTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGTGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
||
| CDS-3UTR TCA 90 bp | ACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCGAGGAATTGCAAGCTaGATCTCATCTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVVAVCYISWFGSDSTGRGIAS*ISSPSS Trigger: GGAAGAAGGAGATGAGATTCAGCTTGCAATTCCTCG...ACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
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| CDS-3UTR CCA 90 bp | TTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTAGTAGCAGGAATTGTTaGGCAGTGTTTTGGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: FPGLDQIQRVTRKLSLTASSRNC*AVFWAY Trigger: ATATGCCCAAAACACTGCCCAACAATTCCTGCTACT...AGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
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| CDS-3UTR CCA 90 bp | GAAATCTCCCTGCATTCTGAACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGAGTAGCAGGAATTGTTaGGCAGTGTTTTGGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: EISLHSEHVSPKAKSKVASSRNC*AVFWAY Trigger: ATATGCCCAAAACACTGCCCAACAATTCCTGCTACT...CGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGAATGCAGGGAGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 72 bp | AAATACCAAAAGTGGATGTTGGCAGACCAAACGGTGTaGGCAATGGTCAGAAGGCATGGTGCTTTTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: KYQKWMLADQTV*AMVRRHGAFIW Trigger: CCAAATAAAAGCACCATGCCTTCTGACCATTGCCAACACCGTTTGGTCTGCCAACATCCACTTTTGGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS-3UTR CCA 90 bp | TCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWFGSDSTGHEKTFADGFKAEKP*NKCVSS Trigger: AGAACTTACACATTTGTTCCATGGCTTCTCAGCTTT...AAAGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033892.9 |
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| 3UTR CAA 72 bp | CTGTGCACACACATTCCATGTGGGTGGATTTATACATaGTCACATGTGGAAATTTTCACCTCTGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LCTHIPCGWIYT*SHVEIFTSDSL Trigger: AAGGCTGTCAGAGGTGAAAATTTCCACATGTGACAATGTATAAATCCACCCACATGGAATGTGTGTGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS-3UTR CCA 90 bp | ACTTCGGTTGTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTTGTTGGGCAGTGTTTTaGGCATATTCTGAATACATC | + |
|
Preference number: 4 (lower is better) Translates to: TSVVAVCYISWFGSDSTGCWAVF*AYSEYI Trigger: GATGTATTCAGAATATGCCCAAAACACTGCCCAACA...ACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCACAACCGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
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| 3UTR CAA 72 bp | TGTTTGCCATTGGTCTACAGGAAGTCTACTGAGTTTTaGTCTGATAATTCTGTTTCCTGCCCCTTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: CLPLVYRKSTEF*SDNSVSCPFPE Trigger: TTCAGGAAAGGGGCAGGAAACAGAATTATCAGACAAAAACTCAGTAGACTTCCTGTAGACCAATGGCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS-3UTR TCA 90 bp | AAGTTAGAGTTGTATAGAGAAATACCAAAAGTGGATGTTGGCAGACCAAACGGTAGCTGCAGACAGTCTTaGATGATGTTTCTGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KLELYREIPKVDVGRPNGSCRQS*MMFLRF Trigger: GAACCTCAGAAACATCATTCAAGACTGTCTGCAGCT...ACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACAACTCTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS-3UTR CCA 90 bp | GTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VCYISWFGSDSTGHEKTFKAEKP*NKCVSS Trigger: GGAACTTACACATTTGTTCCATGGCTTCTCAGCTTT...GAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| 3UTR CAA 72 bp | TTGGCAGTTGAGAATAGGATTGTTTTTCTGATGTTGTaGTTGTTCTCAGTGTGTTTGCCATTGGTCTACAGG | + |
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Preference number: 4 (lower is better) Translates to: LAVENRIVFLML*LFSVCLPLVYR Trigger: CCTGTAGACCAATGGCAAACACACTGAGAACAACAACAACATCAGAAAAACAATCCTATTCTCAACTGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS CCA 90 bp | GGTCCCTGGAAAGCGCGTCTGTTCCTGTGGCCGCGGCTGGAGTTGTaGGGTCGAGGAGCTGCCGGTGTCAGGAGTTTGACTCCAGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GPWKARLFLWPRLEL*GRGAAGVRSLTPAV Trigger: GACCGCTGGAGTCAAACTCCTGACACCGGCAGCTCCTCGACCCCACAACTCCAGCCGCGGCCACAGGAACAGACGCGCTTTCCAGGGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS GCA 90 bp | CCGCGGCGGCTGGTGTTGCTGAACCTCGGTAGCTCTGCAGCTCCATaGGCAGGTTCATCAGGTCTGCTTGCAAGGCAGCCAACTGGTACA | + |
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Preference number: 5 (lower is better) Translates to: PRRLVLLNLGSSAAP*AGSSGLLARQPTGT Trigger: TGTACCAGTTGGCTGCCTTGCAAGCAGACCTGATGAACCTGCGCATGGAGCTGCAGAGCTACCGAGGTTCAGCAACACCAGCCGCCGCGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 90 bp | GGAGGAGCTGAGAGGTCTACATCTTGTTCTGTTTCCTCTGGTCCCTaGAAAGCGCGTCTGTTCCTGTGGCCGCGGCTGGAGTTGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGAERSTSCSVSSGP*KARLFLWPRLELWG Trigger: ACCCCACAACTCCAGCCGCGGCCACAGGAACAGACGCGCTTTCCAGGGACCAGAGGAAACAGAACAAGATGTAGACCTCTCAGCTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 90 bp | AGCTCCATGCGCAGGTTCATCAGGTCTGCTTGCAAGGCAGCCAACTaGTACAAGGACATCGCTGTGAAACTGCTGGACAACAGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSMRRFIRSACKAAN*YKDIAVKLLDNRAS Trigger: GCTGGCCCTGTTGTCCAGCAGTTTCACAGCGATGTCCTTGTACCAGTTGGCTGCCTTGCAAGCAGACCTGATGAACCTGCGCATGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS GCA 90 bp | AGCCTTCCATCCCTGCAGATCCCAAACCAGGCACCCTCCTCCTTCTaGGGAGTGATGGGATCATATCCCACTTTCATATCTTCTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SLPSLQIPNQAPSSF*GVMGSYPTFISSPF Trigger: GAAAGGAGAAGATATGAAAGTGGGATATGATCCCATCACTCCGCAGAAGGAGGAGGGTGCCTGGTTTGGGATCTGCAGGGATGGAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS-3UTR CAA 90 bp | TCTGAACATGTGTCACCCAAGGCAAAAAGCAAGGTTGCGGTGCGTGTTGGCAAACAGCTGCAGACAGTCTaGAATGATGTTTCTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SEHVSPKAKSKVAVRVGKQLQTV*NDVSEV Trigger: AACCTCAGAAACATCATTCAAGACTGTCTGCAGCTG...TTTGCCAACACGCACCGCAACCTTGCTTTTTGCCTTGGGTGACACATGTTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAACTTTCGCTGACGGCTTTCAGCTGCAGACAGTCTaGAATGATGTTTCTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SWFGSDSTGHEKTFADGFQLQTV*NDVSEV Trigger: AACCTCAGAAACATCATTCAAGACTGTCTGCAGCTG...AAAGCCGTCAGCGAAAGTTTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 90 bp | CTCTTTCTCCTCCAAGGCATTTCCTCTTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCCTTTTCGTATAGTCGGCGTGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: LFLLQGISSFKAEKP*NKCVSSFSYSRRVA Trigger: AGCGACACGCCGACTATACGAAAAGGAACTTACACATTTGTTCCATGGCTTCTCAGCTTTAAAAGAGGAAATGCCTTGGAGGAGAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS-3UTR CAA 90 bp | GTGGCTGTCTGTTATATTTCCTGGTTTGGATCAGATTCAACGGGTCACGAGAAAGAAGAAATAGCCTGTTaGCCTCACCACTATTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VAVCYISWFGSDSTGHEKEEIAC*PHHYFV Trigger: AACAAAATAGTGGTGAGGCAAACAGGCTATTTCTTC...TTTCTCGTGACCCGTTGAATCTGATCCAAACCAGGAAATATAACAGACAGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 |
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| CDS CCA 90 bp | CTCTTTCTCCTCCAAGGCATTTCCTCTTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCTGTTTCTGAGGTTCATTCCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: LFLLQGISSFKAEKP*NKCVSSVSEVHSII Trigger: GATAATGGAATGAACCTCAGAAACAGAACTTACACATTTGTTCCATGGCTTCTCAGCTTTAAAAGAGGAAATGCCTTGGAGGAGAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033892.9 |
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| CDS-3UTR CAA 90 bp | CATGGAACATATTCAACATTCCCAGTCACCAGAGAAATGCAAATAGAACCACAGGAAGAAATAGCCTGTTaGCCTCACCACTATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGTYSTFPVTREMQIEPQEEIAC*PHHYFV Trigger: AACAAAATAGTGGTGAGGCAAACAGGCTATTTCTTC...CTGTGGTTCTATTTGCATTTCTCTGGTGACTGGGAATGTTGAATATGTTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS CCA 72 bp | GTCCCTGGAAAGCGCGTCTGTTCCTGTGGCCGCGGCTaGAGTTGTGGGGTCGAGGAGCTGCCGGTGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VPGKRVCSCGRG*SCGVEELPVSG Trigger: TCCTGACACCGGCAGCTCCTCGACCCCACAACTCCAGCCGCGGCCACAGGAACAGACGCGCTTTCCAGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CAA 90 bp | TCTGGTCCCTGGAAAGCGCGTCTGTTCCTGTGGCCGCGGCTGGAGTaGTGGGGTCGAGGAGCTGCCGGTGTCAGGAGTTTGACTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SGPWKARLFLWPRLE*WGRGAAGVRSLTPA Trigger: CGCTGGAGTCAAACTCCTGACACCGGCAGCTCCTCGACCCCACAACTCCAGCCGCGGCCACAGGAACAGACGCGCTTTCCAGGGACCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 72 bp | AAAGCGCGTCTGTTCCTGTGGCCGCGGCTGGAGTTGTaGGGTCGAGGAGCTGCCGGTGTCAGGAGTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: KARLFLWPRLEL*GRGAAGVRSLT Trigger: AGTCAAACTCCTGACACCGGCAGCTCCTCGACCCCACAACTCCAGCCGCGGCCACAGGAACAGACGCGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS GCA 72 bp | CTGGTGTTGCTGAACCTCGGTAGCTCTGCAGCTCCATaGGCAGGTTCATCAGGTCTGCTTGCAAGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVLLNLGSSAAP*AGSSGLLARQP Trigger: TGGCTGCCTTGCAAGCAGACCTGATGAACCTGCGCATGGAGCTGCAGAGCTACCGAGGTTCAGCAACACCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 72 bp | GAGAGGTCTACATCTTGTTCTGTTTCCTCTGGTCCCTaGAAAGCGCGTCTGTTCCTGTGGCCGCGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ERSTSCSVSSGP*KARLFLWPRLE Trigger: CTCCAGCCGCGGCCACAGGAACAGACGCGCTTTCCAGGGACCAGAGGAAACAGAACAAGATGTAGACCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS GCA 72 bp | CTCTGCAGCTCCATGCGCAGGTTCATCAGGTCTGCTTaGAAGGCAGCCAACTGGTACAAGGACATCGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCSSMRRFIRSA*KAANWYKDIAV Trigger: CACAGCGATGTCCTTGTACCAGTTGGCTGCCTTGCAAGCAGACCTGATGAACCTGCGCATGGAGCTGCAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS GCA 72 bp | TCCCTGCAGATCCCAAACCAGGCACCCTCCTCCTTCTaGGGAGTGATGGGATCATATCCCACTTTCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLQIPNQAPSSF*GVMGSYPTFIS Trigger: AGATATGAAAGTGGGATATGATCCCATCACTCCGCAGAAGGAGGAGGGTGCCTGGTTTGGGATCTGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033892.9 ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CAA 72 bp | CGGCGTGTCGCTGTCTGCAATCAGCTGCAGACAGTCTaGAATGATGTTTCTGAGGTTCATTCCATTATCATC | + |
|
Preference number: 6 (lower is better) Translates to: RRVAVCNQLQTV*NDVSEVHSIII Trigger: GATGATAATGGAATGAACCTCAGAAACATCATTCAAGACTGTCTGCAGCTGATTGCAGACAGCGACACGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CAA 90 bp | TCGTATAGTCGGCGTGTCGCTGTCTGCAATCAGCTGCAGACAGTCTaGAATGATGTTTCTGAGGTTCATTCCATTATCATCATGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SYSRRVAVCNQLQTV*NDVSEVHSIIIMLR Trigger: TCTCAACATGATGATAATGGAATGAACCTCAGAAACATCATTCAAGACTGTCTGCAGCTGATTGCAGACAGCGACACGCCGACTATACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207792.3 ENSMUST00000208683.2 |
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| CDS CCA 72 bp | CTCCAAGGCATTTCCTCTTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCCTTTTCGTATAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGISSFKAEKP*NKCVSSFSYSR Trigger: CCGACTATACGAAAAGGAACTTACACATTTGTTCCATGGCTTCTCAGCTTTAAAAGAGGAAATGCCTTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207792.3 |
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| CDS CCA 72 bp | CTCCAAGGCATTTCCTCTTTTAAAGCTGAGAAGCCATaGAACAAATGTGTAAGTTCTGTTTCTGAGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LQGISSFKAEKP*NKCVSSVSEVH Trigger: ATGAACCTCAGAAACAGAACTTACACATTTGTTCCATGGCTTCTCAGCTTTAAAAGAGGAAATGCCTTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033892.9 |
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