Pregenerated sensors for TNFRSF9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028965Ensembl transcript IDs: ENSMUST00000030808.10, ENSMUST00000060901.11, ENSMUST00000105671.8, ENSMUST00000105672.10, ENSMUST00000116257.8, ENSMUST00000126707.3, ENSMUST00000135169.8, ENSMUST00000139826.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGAGTCATGCAGAGGCAAGCGGCAGCCATGTCTGCCCATGGTaGACTGGAAGGCCGCGTTCCTACTGTGAGTTCACAGGTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SRSHAEASGSHVCPW*TGRPRSYCEFTGVP Trigger: GGGAACACCTGTGAACTCACAGTAGGAACGCGGCCTTCCAGTCCACCATGGGCAGACATGGCTGCCGCTTGCCTCTGCATGACTCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR TCA 90 bp | AGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTaGCTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: SLRPSTLEAEAGGFL*LPGQPALQREVLSQ Trigger: TTGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR TCA 90 bp | AGCCTGACACAGAGGAAACAGGAGAAGCAGGCCCTTGAACTGCTCTaGAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SLTQRKQEKQALELL*RFPSKSVRLPPDRD Trigger: ATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAGAGCAGTTCAAGGGCCTGCTTCTCCTGTTTCCTCTGTGTCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR GCA 90 bp | GAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTaGTGTCTCAAAATAAAGAAAAGTAACAACCATTCTCAGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: EDFCDFQASQHYRGR*CLKIKKSNNHSQLL Trigger: CAAGAGCTGAGAATGGTTGTTACTTTTCTTTATTTTGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR TCA 90 bp | GCATGGGTCTCCCCCTTCAGACAGTGGAGGTGTTATTATAGTGAGTaGGAAACCAAAGGAAAATGGGATAGGGTAATATACTGCATCTTA | + |
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Preference number: 1 (lower is better) Translates to: AWVSPFRQWRCYYSE*ETKGKWDRVIYCIL Trigger: TAAGATGCAGTATATTACCCTATCCCATTTTCCTTTGGTTTCTCACTCACTATAATAACACCTCCACTGTCTGAAGGGGGAGACCCATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGTGTTCCACAGGATGGTaGGGTCCTAGTGCTTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: KQRQEDFCDFQASQHYRGCSTGW*GPSASR Trigger: CCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA...CCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCTGTTCCACAGGATGGTaGGGTCCTAGTGCTTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: FPSKSVRLPPDRDAWVSPCSTGW*GPSASR Trigger: CCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA...GGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGACATGTCTGCCCATGGTaGACTGGAAGGCCGCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGHVCPW*TGRPRS Trigger: GGAACGCGGCCTTCCAGTCCACCATGGGCAGACATG...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCAACCCTTTCTCTTCTaGCCTCCTCAGGCATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVLWKQRQEDFCDFQASQQPFLF*PPQASG Trigger: TCCTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTG...CTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCGAGACTTGGATGAGGTaGGCGCCCACACATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: FPSKSVRLPPDRDAWVSPETWMR*APTHHL Trigger: TAGATGATGTGTGGGCGCGCACCTCATCCAAGTCTC...GGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGACCAGACAGGGATGCATaGGTCTCCCCCTTCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGPDRDA*VSPFRQ Trigger: CTGTCTGAAGGGGGAGACCCATGCATCCCTGTCTGG...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCAGAGACTTGGATGAGGTaGGCGCCCACACATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: RISVTSRPASTTEGGAVSETWMR*APTHHL Trigger: TAGATGATGTGTGGGCGCGCACCTCATCCAAGTCTC...TGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCTTCAGAGCGTTAGAAGAGACTTaGATGAGGTGCGCGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: SKSVRLPPDRDAWVSPFRALEET*MRCAPT Trigger: TGTGGGCGCGCACCTCATCCAAGTCTCTTCTAACGC...TCTGAAGGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGGAGACTTGGATGAGGTaGGCGCCCACACATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTETWMR*APTHHL Trigger: TAGATGATGTGTGGGCGCGCACCTCATCCAAGTCTC...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACTGTTCCACAGGATGGTaGGGTCCTAGTGCTTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: FSSDLLRHQECHTHTHTHCSTGW*GPSASR Trigger: CCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGACACATCATCTAGGATaGTGTGTAAGAACAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KQRQEDFCDFQASQHYRGTHHLG*CVRTGW Trigger: CCACCCTGTTCTTACACATCATCCTAGATGATGTGT...CCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCAACCCTTTCTCTTCTaGCCTCCTCAGGCATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LKIPLKICQASSRQGCMGQPFLF*PPQASG Trigger: TCCTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTG...ACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGTAAGAACAGGGTaGTGGGGTTGCTTGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTCVRTG*WGCLCC Trigger: ACAGCACAAGCAACCCCACCACCCTGTTCTTACACA...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGGAGACTTGGATGAGGTaGGCGCCCACACATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQETWMR*APTHHL Trigger: TAGATGATGTGTGGGCGCGCACCTCATCCAAGTCTC...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTACACACACACACGTGTaGATACAGGCAGGCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LKIPLKICQASSRQGCMGTHTHV*IQAGKT Trigger: TGTTTTGCCTGCCTGTATGCACACGTGTGTGTGTGT...ACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTaGTGTCTCAAAATAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PVLWKQRQEDFCDFQASQHYRGR*CLKIKK Trigger: TTTCTTTATTTTGAGACAGCACCTCCCTCTGTAGTG...CTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACACACATCATCTAGGATaGTGTGTAAGAACAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FSSDLLRHQECHTHTHTHTHHLG*CVRTGW Trigger: CCACCCTGTTCTTACACATCATCCTAGATGATGTGT...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCAGGAGAATCTAGAAATTaGTCTTCCCACAGTCCTATT | + |
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Preference number: 2 (lower is better) Translates to: RISVTSRPASTTEGGAVSGESRN*SSHSPI Trigger: AATAGGACTGTGGGAAGATCAATTTCTAGATTCTCC...TGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCTCTATGAGATCCAACTaGAACTGTCATTTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FPSKSVRLPPDRDAWVSPSMRSN*NCHFLR Trigger: TCTGAGAAAATGACAGTTTCAGTTGGATCTCATAGA...GGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTGAAAAGCCTGACACAGAGTGTTCCACAGGATGGTaGGGTCCTAGTGCTTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: QCFVPFLNGLFIEKPDTECSTGW*GPSASR Trigger: CCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA...CTCTGTGTCAGGCTTTTCAATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR CAA 90 bp | AGGTGCTGTCTCAAAATAAAGAAAAGTAACAACCATTCTCAGCTCTaGAGCTGTCCAGGAGTCATGCAGAGGCAAGCGGCAGCCATGTCT | + |
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Preference number: 2 (lower is better) Translates to: RCCLKIKKSNNHSQL*SCPGVMQRQAAAMS Trigger: AGACATGGCTGCCGCTTGCCTCTGCATGACTCCTGGACAGCTCAAGAGCTGAGAATGGTTGTTACTTTTCTTTATTTTGAGACAGCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGGATAGGGTAATATACTaGATCTTATGGCTATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PVLWKQRQEDFCDFQASQDRVIY*ILWLLS Trigger: TGACAATAGCCATAAGATGCAGTATATTACCCTATC...CTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGATCTATGAGATCCAACTaGAACTGTCATTTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGSMRSN*NCHFLR Trigger: TCTGAGAAAATGACAGTTTCAGTTGGATCTCATAGA...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGAAACCAAAGGAAAATaGGATAGGGTAATATACTGC | + |
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Preference number: 2 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGETKGK*DRVIYC Trigger: GCAGTATATTACCCTATCCCATTTTCCTTTGGTTTC...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGGGAGAATCTAGAAATTaGTCTTCCCACAGTCCTATT | + |
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Preference number: 2 (lower is better) Translates to: VVNSLRPSTLEAEAGGFLGESRN*SSHSPI Trigger: AATAGGACTGTGGGAAGATCAATTTCTAGATTCTCC...CAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAAAAGTAACAACCATTCTCAGCTCTTGAGCTGTCCAGGAGTCATGCAGTTCCCCACCTCACAGTaGTTTGTCCCTTTCCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: IKKSNNHSQLLSCPGVMQFPTSQ*FVPFLN Trigger: GTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAA...CTGCATGACTCCTGGACAGCTCAAGAGCTGAGAATGGTTGTTACTTTTCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGTTCCCCACCTCACAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTTCTATGAGATCCAACTaGAACTGTCATTTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QVFPTSQCFVPFLNGLFISMRSN*NCHFLR Trigger: TCTGAGAAAATGACAGTTTCAGTTGGATCTCATAGA...AATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAACACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGACACATCATCTAGGATaGTGTGTAAGAACAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KKVKTNMLALEETWMRCATHHLG*CVRTGW Trigger: CCACCCTGTTCTTACACATCATCCTAGATGATGTGT...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAAAAGTAACAACCATTCTCAGCTCTTGAGCTGTCCAGGAGTCATGCAGGATAGGGTAATATACTaGATCTTATGGCTATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: IKKSNNHSQLLSCPGVMQDRVIY*ILWLLS Trigger: TGACAATAGCCATAAGATGCAGTATATTACCCTATC...CTGCATGACTCCTGGACAGCTCAAGAGCTGAGAATGGTTGTTACTTTTCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR CCA 72 bp | CATGCAGAGGCAAGCGGCAGCCATGTCTGCCCATGGTaGACTGGAAGGCCGCGTTCCTACTGTGAGTTCACA | + |
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Preference number: 3 (lower is better) Translates to: HAEASGSHVCPW*TGRPRSYCEFT Trigger: TGTGAACTCACAGTAGGAACGCGGCCTTCCAGTCCACCATGGGCAGACATGGCTGCCGCTTGCCTCTGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR TCA 72 bp | CCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTaGCTTCCAGGCCAGCCAGCACTACAGAGGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: PSTLEAEAGGFL*LPGQPALQREV Trigger: CACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGAACAGGGTGGTGGGGTaGCTTGTGCTGTTCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTNRVVG*LVLFHR Trigger: CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTT...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCTTCAGAAACAGGGTGGTGGGGTaGCTTGTGCTGTTCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: SKSVRLPPDRDAWVSPFRNRVVG*LVLFHR Trigger: CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTT...TCTGAAGGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGGTAGAGGACCCAGGTTaGATTCCTAGCACCCACACA | + |
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Preference number: 3 (lower is better) Translates to: KQRQEDFCDFQASQHYRGVEDPG*IPSTHT Trigger: TGTGTGGGTGCTAGGAATCAAACCTGGGTCCTCTAC...CCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR CCA 72 bp | AAAACTGTCCAGGGCAGGGCTGGAAAGCTGACTCAGTaGTTAAGAGCACTGGCTGCCCTTGTAGAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: KTVQGRAGKLTQ*LRALAALVEDP Trigger: TGGGTCCTCTACAAGGGCAGCCAGTGCTCTTAACCACTGAGTCAGCTTTCCAGCCCTGCCCTGGACAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTAACAGGGTGGTGGGGTaGCTTGTGCTGTTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKIPLKICQASSRQGCMGNRVVG*LVLFHR Trigger: CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTT...ACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGTAGAGGACCCAGGTTaGATTCCTAGCACCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGVEDPG*IPSTHT Trigger: TGTGTGGGTGCTAGGAATCAAACCTGGGTCCTCTAC...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR TCA 72 bp | CAGAGGAAACAGGAGAAGCAGGCCCTTGAACTGCTCTaGAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRKQEKQALELL*RFPSKSVRLPP Trigger: TGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAGAGCAGTTCAAGGGCCTGCTTCTCCTGTTTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTGAAAAGCCTGACACAGAGAACAGGGTGGTGGGGTaGCTTGTGCTGTTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QCFVPFLNGLFIEKPDTENRVVG*LVLFHR Trigger: CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTT...CTCTGTGTCAGGCTTTTCAATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR TCA 72 bp | AAGCCTGACACAGAGGAAACAGGAGAAGCAGGCCCTTaGACTGCTCTGAAGATTCCCCTCAAAATCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPDTEETGEAGP*TALKIPLKICQ Trigger: CTGACAGATTTTGAGGGGAATCTTCAGAGCAGTTCAAGGGCCTGCTTCTCCTGTTTCCTCTGTGTCAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGAACAGGGTGGTGGGGTaGCTTGTGCTGTTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KKVKTNMLALEETWMRCANRVVG*LVLFHR Trigger: CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTT...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAATTTTAACTGGACCATaGGTCTATGAGATCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGILTGP*VYEIQL Trigger: CAGTTGGATCTCATAGACCAATGGTCCAGTTAAAAT...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR GCA 72 bp | CCTACTGTGAGTTCACAGGTGTTCCCCACCTCACAGTaGTTTGTCCCTTTCCTAAACGGCCTTTTTATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTVSSQVFPTSQ*FVPFLNGLFIE Trigger: TTCAATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAACACCTGTGAACTCACAGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR GCA 72 bp | TGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTaGTGTCTCAAAATAAAGAAAAGTAACAACCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CDFQASQHYRGR*CLKIKKSNNHS Trigger: AGAATGGTTGTTACTTTTCTTTATTTTGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR CCA 72 bp | ATTAAGTTAAATTTTAAAAACTGTCCAGGGCAGGGCTaGAAAGCTGACTCAGTGGTTAAGAGCACTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IKLNFKNCPGQG*KADSVVKSTGC Trigger: GCAGCCAGTGCTCTTAACCACTGAGTCAGCTTTCCAGCCCTGCCCTGGACAGTTTTTAAAATTTAACTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACTGATTTTACAGTTATTTTAACTGGACCATTGGTCTATGAGGTAGAGGACCCAGGTTaGATTCCTAGCACCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTDFTVILTGPLVYEVEDPG*IPSTHT Trigger: TGTGTGGGTGCTAGGAATCAAACCTGGGTCCTCTAC...CTCATAGACCAATGGTCCAGTTAAAATAACTGTAAAATCAGTGTGTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR CCA 72 bp | AAAGGAAAATGGGATAGGGTAATATACTGCATCTTATaGCTATTGTCATGCATCATATTTGCACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KGKWDRVIYCIL*LLSCIIFAHTH Trigger: GTGTGTGTGTGCAAATATGATGCATGACAATAGCCATAAGATGCAGTATATTACCCTATCCCATTTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCAGGACCTGCAAGGAGTaGCCTCCTGGTCCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLRTCKE*PPGPPS Trigger: AGAGGGAGGACCAGGAGGGCACTCCTTGCAGGTCCT...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCAGCTGGAGAAGGTACTTaGAGGGCAGCTCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPAGEGT*RAALAD Trigger: GTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGC...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTGCTGGAGAAGGTACTTaGAGGGCAGCTCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASAGEGT*RAALAD Trigger: GTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGC...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCAGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPAVHLC*RRYLEG Trigger: GCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGC...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCATGCTTCGTTAGCTCCTaGCCAGGCCTGCAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPCFVSS*PGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCA...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTAGGAGCTGGAGAAGGTACTTaGAGGGCAGCTCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGWWGPSASRFRPTHLLGAGEGT*RAALAD Trigger: GTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGC...TCCTAGGAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGTGCTTCGTTAGCTCCTaGCCAGGCCTGCAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRQEDFCDFQASQHYRGCFVSS*PGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCA...CCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCTGCTTCGTTAGCTCCTaGCCAGGCCTGCAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLCFVSS*PGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCA...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCTAGCAGCAGCACAATaGCCACCACGTTGTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASLAAAQ*PPRCNS Trigger: ACTGTTACAACGTGGTGGTCATTGTGCTGCTGCTAG...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACTAGCAGCAGCACAATaGCCACCACGTTGTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPLAAAQ*PPRCNS Trigger: ACTGTTACAACGTGGTGGTCATTGTGCTGCTGCTAG...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLQASSS*AAPVVF Trigger: GAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTG...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGCAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRQEDFCDFQASQHYRGQASSS*AAPVVF Trigger: GAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTG...CCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTTTATCACAGGAGTTCTaGACGGCTCCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASLSQEF*TAPTFS Trigger: TGAGAAGGTGGGAGCCGTGCAGAACTCCTGTGATAA...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASPFHIW*TVAPSN Trigger: ATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGG...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPPFHIW*TVAPSN Trigger: ATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGG...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTAGGAAACAAGGTAAGGACCTaGAAGGAGTGCCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGWWGPSASRFRPTHLLGNKVRT*KECPPG Trigger: ACCAGGAGGGCACTCCTTGCAGGTCCTTACCTTGTT...TCCTAGGAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCGCTGGAGAAGGTACTTaGAGGGCAGCTCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCAGEGT*RAALAD Trigger: GTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGC...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCAGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RISVTSRPASTTEGGAVSAVHLC*RRYLEG Trigger: GCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGC...TGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLSPFHI*CTVAPS Trigger: GCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACT...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTGACTTCCAGGCCAGCCAGAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLWKQRQEDFCDFQASQSPFHI*CTVAPS Trigger: GCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACT...CTGGCTGGCCTGGAAGTCACAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCTCCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLSWSSL*SHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGA...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTTCCTTCTTCTTCCTGTaGACATCGGCAGCTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASSFFFL*TSAATS Trigger: GCTTGTAGCTGCCGATGTCCACAGGAAGAAGAAGGA...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCAGGTCTTCTTAAATGCTaGTCCTCCCTCTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPGLLKC*SSLWSH Trigger: GTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACC...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCCAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCQASSS*AAPVVF Trigger: GAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTG...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTAGGACCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGWWGPSASRFRPTHLLGPFHIW*TVAPSN Trigger: ATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGG...TCCTAGGAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACCAAGCTACAGGTTTTaGAACCCTGCTTCGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPPSYRF*NPASLA Trigger: AGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGG...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTAGTGGTCTTCTTAAATaGTGGTCCTCCCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWWGCLCCSTGWWGPSASSGLLK*WSSLWS Trigger: ACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACT...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGCTTCGTTAGCTCCTaGCCAGGCCTGCAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTCFVSS*PGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCA...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCCTGGAGTCACAGAAATaGTGGTACTGGGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSKSVRLPPDRDAWVSPLESQK*WYWERS Trigger: GCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAG...GGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTGGAGTCACAGAAATaGTGGTACTGGGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLLESQK*WYWERS Trigger: GCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAG...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCTCCTTCTTCTTCCTGTaGACATCGGCAGCTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLSFFFL*TSAATS Trigger: GCTTGTAGCTGCCGATGTCCACAGGAAGAAGAAGGA...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCTGCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCCWSSL*SHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCA...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105672.10 |
||
| CDS-3UTR TCA 90 bp | ACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTAGGACAGAAAGTACCAGGCTaGCAGTTATCACAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGWWGPSASRFRPTHLLGQKVPG*QLSQEF Trigger: GAACTCCTGTGATAACTGTCAGCCTGGTACTTTCTG...TCCTAGGAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCATTGGAGGGCAGCTCTTaGAGACTGGATTGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPLEGSS*RLDCIF Trigger: GAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCAGACAGGGATGCATGGGTCTCCCCCTTCAGACAGTGGAGGTGTTATTAACAAGGTAAGGACCTaGAAGGAGTGCCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTGMHGSPPSDSGGVINKVRT*KECPPG Trigger: ACCAGGAGGGCACTCCTTGCAGGTCCTTACCTTGTT...AATAACACCTCCACTGTCTGAAGGGGGAGACCCATGCATCCCTGTCTGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030808.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCTCCCCCAGTGGTCTTCTTAAATaGTGGTCCTCCCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSKSVRLPPDRDAWVSPSGLLK*WSSLWS Trigger: ACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACT...GGGGGAGACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105672.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSDLLRHQECHTHTHTHAVHLC*RRYLEG Trigger: GCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGC...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCCTGGAGTCACAGAAATaGTGGTACTGGGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCLESQK*WYWERS Trigger: GCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAG...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCAGACAGGGATGCATGGGTCTCCCCCTTCAGACAGTGGAGGTGTTATTTCCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTGMHGSPPSDSGGVISWSSL*SHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGA...AATAACACCTCCACTGTCTGAAGGGGGAGACCCATGCATCCCTGTCTGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030808.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTCCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTSWSSL*SHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGA...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS-3UTR CCA 90 bp | AGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCATCCTTCTTCTTCCTGTaGACATCGGCAGCTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RISVTSRPASTTEGGAVSSFFFL*TSAATS Trigger: GCTTGTAGCTGCCGATGTCCACAGGAAGAAGAAGGA...TGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| 3UTR CAA 72 bp | TTAAGAGCACTGGCTGCCCTTGTAGAGGACCCAGGTTaGATTCCTAGCACCCACACAAAGGCTCACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRALAALVEDPG*IPSTHTKAHSH Trigger: ATGGCTGTGAGCCTTTGTGTGGGTGCTAGGAATCAAACCTGGGTCCTCTACAAGGGCAGCCAGTGCTCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCCAGACAGGGATGCATGGGTCTCCCCCTTCAGACAGTGGAGGTGTTATTCTAGCAGCAGCACAATaGCCACCACGTTGTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTGMHGSPPSDSGGVILAAAQ*PPRCNS Trigger: ACTGTTACAACGTGGTGGTCATTGTGCTGCTGCTAG...AATAACACCTCCACTGTCTGAAGGGGGAGACCCATGCATCCCTGTCTGGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCTTGGAGGGCAGCTCTTaGAGACTGGATTGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLLEGSS*RLDCIF Trigger: GAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCAATGGAATCCTTCAATaGACTCACACTCCGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSTGWWGPSASRFRPTHLNGILQ*THTPRC Trigger: ACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATT...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGAGGACCTGCAAGGAGTaGCCTCCTGGTCCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRRTCKE*PPGPPS Trigger: AGAGGGAGGACCAGGAGGGCACTCCTTGCAGGTCCT...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACAACAAGGTAAGGACCTaGAAGGAGTGCCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSDLLRHQECHTHTHTHNKVRT*KECPPG Trigger: ACCAGGAGGGCACTCCTTGCAGGTCCTTACCTTGTT...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGGCTGGAGAAGGTACTTaGAGGGCAGCTCTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVNSLRPSTLEAEAGGFLAGEGT*RAALAD Trigger: GTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGC...CAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR TCA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGACAGAAAGTACCAGGCTaGCAGTTATCACAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGQKVPG*QLSQEF Trigger: GAACTCCTGTGATAACTGTCAGCCTGGTACTTTCTG...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CCA 90 bp | CAGGTGTTCCCCACCTCACAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTTGCTTCGTTAGCTCCTaGCCAGGCCTGCAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVFPTSQCFVPFLNGLFICFVSS*PGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCA...AATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAACACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | GTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGTTATCACAGGAGTTCTaGACGGCTCCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVNSLRPSTLEAEAGGFLLSQEF*TAPTFS Trigger: TGAGAAGGTGGGAGCCGTGCAGAACTCCTGTGATAA...CAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTTGGAGGGCAGCTCTTaGAGACTGGATTGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTLEGSS*RLDCIF Trigger: GAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACCCAAGCTACAGGTTTTaGAACCCTGCTTCGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSDLLRHQECHTHTHTHPSYRF*NPASLA Trigger: AGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGG...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTCCAAGCTACAGGTTTTaGAACCCTGCTTCGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKIPLKICQASSRQGCMGPSYRF*NPASLA Trigger: AGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGG...ACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRAVHLC*RRYLEG Trigger: GCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGC...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CCA 90 bp | CAGGTGTTCCCCACCTCACAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVFPTSQCFVPFLNGLFISPFHI*CTVAPS Trigger: GCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACT...AATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAACACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR TCA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGCTAGCAGCAGCACAATaGCCACCACGTTGTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQLAAAQ*PPRCNS Trigger: ACTGTTACAACGTGGTGGTCATTGTGCTGCTGCTAG...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGCAGAAAGTACCAGGCTaGCAGTTATCACAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVNSLRPSTLEAEAGGFLQKVPG*QLSQEF Trigger: GAACTCCTGTGATAACTGTCAGCCTGGTACTTTCTG...CAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGCTGGATTGTATTTTCTaGAGAAAGTACCAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTLDCIF*RKYQAD Trigger: GTCAGCCTGGTACTTTCTGCAGAAAATACAATCCAG...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGATTCCCCTCAAAATCTGTCAGGCTTCCTCCAGACAGGGATGCATGGGTTTGGAGGGCAGCTCTTaGAGACTGGATTGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKIPLKICQASSRQGCMGLEGSS*RLDCIF Trigger: GAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA...ACCCATGCATCCCTGTCTGGAGGAAGCCTGACAGATTTTGAGGGGAATCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGCCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQPFHIW*TVAPSN Trigger: ATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGG...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAGGATTTCTGCCAAGCTACAGGTTTTaGAACCCTGCTTCGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVNSLRPSTLEAEAGGFLPSYRF*NPASLA Trigger: AGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGG...CAGAAATCCTCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGAGGACCTGCAAGGAGTaGCCTCCTGGTCCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCARTCKE*PPGPPS Trigger: AGAGGGAGGACCAGGAGGGCACTCCTTGCAGGTCCT...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRSPFHI*CTVAPS Trigger: GCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACT...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCAGTGGTCTTCTTAAATaGTTGCTTGAATATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCSGLLK*LLEYVG Trigger: CCCCACATATTCAAGCAACCATTTAAGAAGACCACT...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGCCAAGCTACAGGTTTTaGAACCCTGCTTCGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQPSYRF*NPASLA Trigger: AGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGG...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCGTCTTCTTAAATGGTTaGTTGAATATGTGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDLLRHQECHTHTHTHVCVFLNG*LNMWGN Trigger: ATTCCCCCACATATTCAAGCAACCATTTAAGAAGAC...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGAGTGGTCTTCTTAAATaGTTGCTTGAATATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTSSGIRSVTHTHTHTSGLLK*LLEYVG Trigger: CCCCACATATTCAAGCAACCATTTAAGAAGACCACT...CGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGGGTCTTCTTAAATGCTaGTCCTCCCTCTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRGLLKC*SSLWSH Trigger: GTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACC...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105672.10 |
||
| CDS-3UTR TCA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCAGAAAGTACCAGGCTaGCAGTTATCACAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRQKVPG*QLSQEF Trigger: GAACTCCTGTGATAACTGTCAGCCTGGTACTTTCTG...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTTTGTCCCTTTCCTAAACGGCCTTTTTATTGAAAAGCCTGACACAGAGTTATCACAGGAGTTCTaGACGGCTCCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCFVPFLNGLFIEKPDTELSQEF*TAPTFS Trigger: TGAGAAGGTGGGAGCCGTGCAGAACTCCTGTGATAA...CTCTGTGTCAGGCTTTTCAATAAAAAGGCCGTTTAGGAAAGGGACAAAGCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGAATGGAATCCTTCAATaGACTCACACTCCGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQNGILQ*THTPRC Trigger: ACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATT...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCAAVHLC*RRYLEG Trigger: GCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGC...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAAATTTTAAAAACTGTCCAGGGCAGGGCTGGAAAGCTGACTCAGTGGTTAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNFKNCPGQGWKADSVVSPFHI*CTVAPS Trigger: GCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACT...AACCACTGAGTCAGCTTTCCAGCCCTGCCCTGGACAGTTTTTAAAATTTAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACAGTGGTCTTCTTAAATaGTTGCTTGAATATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSDLLRHQECHTHTHTHSGLLK*LLEYVG Trigger: CCCCACATATTCAAGCAACCATTTAAGAAGACCACT...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGTGCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCACWSSL*SHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCA...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGCTAGCAGCAGCACAATaGCCACCACGTTGTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCALAAAQ*PPRCNS Trigger: ACTGTTACAACGTGGTGGTCATTGTGCTGCTGCTAG...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGTTATCACAGGAGTTCTaGACGGCTCCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCALSQEF*TAPTFS Trigger: TGAGAAGGTGGGAGCCGTGCAGAACTCCTGTGATAA...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGCCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCAPFHIW*TVAPSN Trigger: ATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGG...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGCTGGAGTCACAGAAATaGTGGTACTGGGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCALESQK*WYWERS Trigger: GCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAG...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACTGATTTTACAGTTATTTTAACTGGACCATTGGTCTATGAGCAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTDFTVILTGPLVYEQASSS*AAPVVF Trigger: GAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTG...CTCATAGACCAATGGTCCAGTTAAAATAACTGTAAAATCAGTGTGTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAAATTTTAAAAACTGTCCAGGGCAGGGCTGGAAAGCTGACTCAGTGGTTAATGGAATCCTTCAATaGACTCACACTCCGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNFKNCPGQGWKADSVVNGILQ*THTPRC Trigger: ACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATT...AACCACTGAGTCAGCTTTCCAGCCCTGCCCTGGACAGTTTTTAAAATTTAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGTTGGAGGGCAGCTCTTaGAGACTGGATTGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCALEGSS*RLDCIF Trigger: GAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGAATGGAATCCTTCAATaGACTCACACTCCGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKVKTNMLALEETWMRCANGILQ*THTPRC Trigger: ACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATT...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAAATTTTAAAAACTGTCCAGGGCAGGGCTGGAAAGCTGACTCAGTGGTTGTCTTCTTAAATGGTTaGTTGAATATGTGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLNFKNCPGQGWKADSVVVFLNG*LNMWGN Trigger: ATTCCCCCACATATTCAAGCAACCATTTAAGAAGAC...AACCACTGAGTCAGCTTTCCAGCCCTGCCCTGGACAGTTTTTAAAATTTAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030808.10 ENSMUST00000116257.8 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACTGATTTTACAGTTATTTTAACTGGACCATTGGTCTATGAGGTCTTCTTAAATGGTTaGTTGAATATGTGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTDFTVILTGPLVYEVFLNG*LNMWGN Trigger: ATTCCCCCACATATTCAAGCAACCATTTAAGAAGAC...CTCATAGACCAATGGTCCAGTTAAAATAACTGTAAAATCAGTGTGTGTGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030808.10 ENSMUST00000116257.8 |
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| CDS CCA 90 bp | GCAAGGAGTGCCCTCCTGGTCCTCCCTCTGGAGTCACAGAAATGGTaGTACTGGGAGAGAAGCTCACCACAGGGGGTCCACACACCACGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSALLVLPLESQKW*YWERSSPQGVHTPR Trigger: ACGTGGTGTGTGGACCCCCTGTGGTGAGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGAGGGCACTCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 ENSMUST00000126707.3 |
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| CDS CCA 90 bp | CCTGCAAGGAGTGCCCTCCTGGTCCTCCCTCTGGAGTCACAGAAATaGTGGTACTGGGAGAGAAGCTCACCACAGGGGGTCCACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: PARSALLVLPLESQK*WYWERSSPQGVHTP Trigger: TGGTGTGTGGACCCCCTGTGGTGAGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGAGGGCACTCCTTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 ENSMUST00000126707.3 |
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| CDS CCA 90 bp | AGTGCCCTCCTGGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACTaGGAGAGAAGCTCACCACAGGGGGTCCACACACCACGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SALLVLPLESQKWWY*ERSSPQGVHTPRPS Trigger: AGAAGGACGTGGTGTGTGGACCCCCTGTGGTGAGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGAGGGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 ENSMUST00000126707.3 |
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| CDS-3UTR CAA 90 bp | GCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ACAVPQDGGVLVLLGFGPHSHSA*WVEEQN Trigger: GTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTG...TGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS GCA 90 bp | AAAGCCGATGTCAGCGCCAGGAACAAGGTAAGGACCTGCAAGGAGTaGCCTCCTGGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: KADVSARNKVRTCKE*PPGPPSGVTEMVVL Trigger: CAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGAGGGCACTCCTTGCAGGTCCTTACCTTGTTCCTGGCGCTGACATCGGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 ENSMUST00000126707.3 |
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| CDS-3UTR CAA 90 bp | ACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCCTAGGACACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGWWGPSASRFRPTHLLGHSHSA*WVEEQN Trigger: GTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTG...TCCTAGGAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS CCA 90 bp | GGCCTGCAGTCCTTTTCACATCTGGTGCACTGTGGCCCCAAGCAATaGAATCCTTCAATGCACTCACACTCCGCGTTGTGGGTAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLQSFSHLVHCGPKQ*NPSMHSHSALWVEE Trigger: CTCCTCTACCCACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACTGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGTGGGGTTGCTTGTGCTGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTACAAGCATCTTCCTCTaGAGCTGCTCCAGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWWGCLCCSTGWWGPSASTSIFL*SCSSGL Trigger: AAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGT...AGAAGCACTAGGACCCCACCATCCTGTGGAACAGCACAAGCAACCCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGACACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGHSHSA*WVEEQN Trigger: GTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTG...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | TGTTCCACAGGATGGTGGGGTCCTAGTGCTTCTCGGTTTCGGCCCACACATCTCACAAGCATCTTCCTCTaGAGCTGCTCCAGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSTGWWGPSASRFRPTHLTSIFL*SCSSGL Trigger: AAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGT...GAGATGTGTGGGCCGAAACCGAGAAGCACTAGGACCCCACCATCCTGTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACCACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSDLLRHQECHTHTHTHHSHSA*WVEEQN Trigger: GTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTG...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS TCA 90 bp | CCTTCTTCTTCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTCTTAAATGCTGGTCCTCCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSCGHRQLQASSS*AAPVVFLNAGPPSG Trigger: TCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGAAGAAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS GCA 90 bp | TTCTTCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTGAGCTaGTCCAGTGGTCTTCTTAAATGCTGGTCCTCCCTCTGGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FFLWTSAATSIFLLS*SSGLLKCWSSLWSH Trigger: GTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS-3UTR CAA 90 bp | AGGGGAGACGTGGTGAACAGTTTAAGACCCAGTACTCTGGAAGCAGAGGCAGGAACAAGCATCTTCCTCTaGAGCTGCTCCAGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGDVVNSLRPSTLEAEAGTSIFL*SCSSGL Trigger: AAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGT...TCCTGCCTCTGCTTCCAGAGTACTGGGTCTTAAACTGTTCACCACGTCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS GCA 90 bp | CCGTTCTGGTCATTAAATGTTCCCAAGCTACAGGTTTTGCAACCCTaGTTCGTTAGCTCCTGGCCAGGCCTGCAGTCCTTTTCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFWSLNVPKLQVLQP*FVSSWPGLQSFSHL Trigger: CAGATGTGAAAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGGGAACATTTAATGACCAGAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS GCA 90 bp | GCTACAAGCATCTTCCTCTTGAGCTGCTCCAGTGGTCTTCTTAAATaGTGGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATSIFLLSCSSGLLK*WSSLWSHRNGGTGR Trigger: TCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS CCA 90 bp | TCTAGAGAGCAGTTCGTCCAGGGTCGACAGACGCCAGTACCGTTCTaGTCATTAAATGTTCCCAAGCTACAGGTTTTGCAACCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SREQFVQGRQTPVPF*SLNVPKLQVLQPCF Trigger: GAAGCAGGGTTGCAAAACCTGTAGCTTGGGAACATTTAATGACCAGAACGGTACTGGCGTCTGTCGACCCTGGACGAACTGCTCTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGCACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQHSHSA*WVEEQN Trigger: GTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTG...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS GCA 90 bp | CGCGTTGTGGGTAGAGGAGCAAAACTTCTTGAACCTGAAATAGCCTaGACACACTCTGCAGATGTTACAGTTCGGCTGTCCACCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVVGRGAKLLEPEIA*THSADVTVRLSTYA Trigger: AGCATAGGTGGACAGCCGAACTGTAACATCTGCAGAGTGTGTGCAGGCTATTTCAGGTTCAAGAAGTTTTGCTCCTCTACCCACAACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
||
| CDS CCA 90 bp | ACAAGCATCTTCCTCTTGAGCTGCTCCAGTGGTCTTCTTAAATGCTaGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACTGGGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSIFLLSCSSGLLKC*SSLWSHRNGGTGRE Trigger: TTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
||
| CDS-3UTR CAA 90 bp | AGGATTTCTGTGACTTCCAGGCCAGCCAGCACTACAGAGGGAGGTGCTGTCTCATTTTTCCTGATCCATTaGAGCACAGAGAACAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RISVTSRPASTTEGGAVSFFLIH*STENRR Trigger: TCTCCTGTTCTCTGTGCTCAAATGGATCAGGAAAAA...TGAGACAGCACCTCCCTCTGTAGTGCTGGCTGGCCTGGAAGTCACAGAAATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030808.10 ENSMUST00000116257.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACGTGTGCGGTCTTCTTAAATGGTaGCTTGAATATGTGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDLLRHQECHTHTHTHVCGLLKW*LEYVGE Trigger: TTCCCCCACATATTCAAGCAACCATTTAAGAAGACC...GCACACGTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS TCA 90 bp | CCTTCTTCTTCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTCTTAAATGGTTGCTTGAATATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSCGHRQLQASSS*AAPVVFLNGCLNMW Trigger: CCACATATTCAAGCAACCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGAAGAAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS GCA 90 bp | TTCTTCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTGAGCTaGTCCAGTGGTCTTCTTAAATGGTTGCTTGAATATGTGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: FFLWTSAATSIFLLS*SSGLLKWLLEYVGE Trigger: TTCCCCCACATATTCAAGCAACCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTTCTGACCTCCTCAGGCATCAGGAGTGTCACACACACACACACACACACTTTTTCCTGATCCATTaGAGCACAGAGAACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FSSDLLRHQECHTHTHTHFFLIH*STENRR Trigger: TCTCCTGTTCTCTGTGCTCAAATGGATCAGGAAAAA...GTGTGTGTGTGTGTGTGTGTGACACTCCTGATGCCTGAGGAGGTCAGAAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | ATCCATAACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGACAAGCATCTTCCTCTaGAGCTGCTCCAGTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: IHNSSSYGTNPFSSDLLRTSIFL*SCSSGL Trigger: AAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGT...CCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTTATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | AACTCCAGTTCTTATGGAACCAACCCTTTCTCTTCTGACCTCCTCAGGCATCAGTTTTTCCTGATCCATTaGAGCACAGAGAACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: NSSSYGTNPFSSDLLRHQFFLIH*STENRR Trigger: TCTCCTGTTCTCTGTGCTCAAATGGATCAGGAAAAA...CTGATGCCTGAGGAGGTCAGAAGAGAAAGGGTTGGTTCCATAAGAACTGGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS-3UTR CAA 90 bp | AAAAAGGTAAAGACAAATATGTTAGCGTTAGAAGAGACTTGGATGAGGTGCGCGGGTCTTCTTAAATGGTaGCTTGAATATGTGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: KKVKTNMLALEETWMRCAGLLKW*LEYVGE Trigger: TTCCCCCACATATTCAAGCAACCATTTAAGAAGACC...CGCGCACCTCATCCAAGTCTCTTCTAACGCTAACATATTTGTCTTTACCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS CCA 72 bp | CTGGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACTaGGAGAGAAGCTCACCACAGGGGGTCCACACACCA | + |
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Preference number: 6 (lower is better) Translates to: LVLPLESQKWWY*ERSSPQGVHTP Trigger: TGGTGTGTGGACCCCCTGTGGTGAGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 |
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| CDS GCA 72 bp | GCTCCTGGCCAGGCCTGCAGTCCTTTTCACATCTGGTaGACTGTGGCCCCAAGCAATGGAATCCTTCAATGC | + |
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Preference number: 6 (lower is better) Translates to: APGQACSPFHIW*TVAPSNGILQC Trigger: GCATTGAAGGATTCCATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACTGCAGGCCTGGCCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS CCA 72 bp | AAGGACCTGCAAGGAGTGCCCTCCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGTACTGGGAGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: KDLQGVPSWSSL*SHRNGGTGREA Trigger: AGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGGAGGGCACTCCTTGCAGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 ENSMUST00000126707.3 |
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| CDS CCA 72 bp | CTCTGCAGATGTTACAGTTCGGCTGTCCACCTATGCTaGAGAAGGTACTTGGAGGGCAGCTCTTGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LCRCYSSAVHLC*RRYLEGSSCRL Trigger: CAGTCTGCAAGAGCTGCCCTCCAAGTACCTTCTCCAGCATAGGTGGACAGCCGAACTGTAACATCTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS CCA 72 bp | TTAGCTCCTGGCCAGGCCTGCAGTCCTTTTCACATCTaGTGCACTGTGGCCCCAAGCAATGGAATCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LAPGQACSPFHI*CTVAPSNGILQ Trigger: TTGAAGGATTCCATTGCTTGGGGCCACAGTGCACCAGATGTGAAAAGGACTGCAGGCCTGGCCAGGAGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS GCA 72 bp | TGGACATCGGCAGCTACAAGCATCTTCCTCTTGAGCTaGTCCAGTGGTCTTCTTAAATGCTGGTCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WTSAATSIFLLS*SSGLLKCWSSL Trigger: GAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS CAA 72 bp | CCGTTCTGGTCATTAAATGTTCCCAAGCTACAGGTTTaGCAACCCTGCTTCGTTAGCTCCTGGCCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PFWSLNVPKLQV*QPCFVSSWPGL Trigger: CAGGCCTGGCCAGGAGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGGGAACATTTAATGACCAGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS CAA 90 bp | ACGCCAGTACCGTTCTGGTCATTAAATGTTCCCAAGCTACAGGTTTaGCAACCCTGCTTCGTTAGCTCCTGGCCAGGCCTGCAGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TPVPFWSLNVPKLQV*QPCFVSSWPGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGGGAACATTTAATGACCAGAACGGTACTGGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS TCA 72 bp | TCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTCTTAAATGCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCGHRQLQASSS*AAPVVFLNAGP Trigger: AGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS CCA 72 bp | TGCTCCAGTGGTCTTCTTAAATGCTGGTCCTCCCTCTaGAGTCACAGAAATGGTGGTACTGGGAGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: CSSGLLKCWSSL*SHRNGGTGREA Trigger: AGCTTCTCTCCCAGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS TCA 72 bp | TCCTGTGGACATCGGCAGCTACAAGCATCTTCCTCTTaGGCTGCTCCAGTGGTCTTCTTAAATGGTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SCGHRQLQASSS*AAPVVFLNGCL Trigger: CAAGCAACCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS GCA 72 bp | TCATTAAATGTTCCCAAGCTACAGGTTTTGCAACCCTaGTTCGTTAGCTCCTGGCCAGGCCTGCAGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLNVPKLQVLQP*FVSSWPGLQSF Trigger: AAAGGACTGCAGGCCTGGCCAGGAGCTAACGAAGCAGGGTTGCAAAACCTGTAGCTTGGGAACATTTAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS GCA 72 bp | ATCTTCCTCTTGAGCTGCTCCAGTGGTCTTCTTAAATaGTGGTCCTCCCTCTGGAGTCACAGAAATGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IFLLSCSSGLLK*WSSLWSHRNGG Trigger: ACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS CCA 72 bp | TTCCTCTTGAGCTGCTCCAGTGGTCTTCTTAAATGCTaGTCCTCCCTCTGGAGTCACAGAAATGGTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: FLLSCSSGLLKC*SSLWSHRNGGT Trigger: AGTACCACCATTTCTGTGACTCCAGAGGGAGGACCAGCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060901.11 ENSMUST00000105672.10 |
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| CDS GCA 72 bp | TTGGAGGGCAGCTCTTGCAGACTGGATTGTATTTTCTaGAGAAAGTACCAGGCTGACAGTTATCACAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LEGSSCRLDCIF*RKYQADSYHRS Trigger: ACTCCTGTGATAACTGTCAGCCTGGTACTTTCTGCAGAAAATACAATCCAGTCTGCAAGAGCTGCCCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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| CDS GCA 72 bp | TGGACATCGGCAGCTACAAGCATCTTCCTCTTGAGCTaGTCCAGTGGTCTTCTTAAATGGTTGCTTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: WTSAATSIFLLS*SSGLLKWLLEY Trigger: ATATTCAAGCAACCATTTAAGAAGACCACTGGAGCAGCTCAAGAGGAAGATGCTTGTAGCTGCCGATGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030808.10 ENSMUST00000105671.8 ENSMUST00000116257.8 |
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| CDS CAA 72 bp | AAGCAATGGAATCCTTCAATGCACTCACACTCCGCGTaGTGGGTAGAGGAGCAAAACTTCTTGAACCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KQWNPSMHSHSA*WVEEQNFLNLK Trigger: TTTCAGGTTCAAGAAGTTTTGCTCCTCTACCCACAACGCGGAGTGTGAGTGCATTGAAGGATTCCATTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030808.10 ENSMUST00000060901.11 ENSMUST00000105671.8 ENSMUST00000105672.10 ENSMUST00000116257.8 ENSMUST00000126707.3 ENSMUST00000135169.8 ENSMUST00000139826.8 |
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