Pregenerated sensors for TNFRSF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028602Ensembl transcript IDs: ENSMUST00000030339.13, ENSMUST00000123027.2
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGATGGTGAGTGCCCACTGATGGGGCCCAGGGGCCAGTGCTCTTaGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PDGECPLMGPRGQCS*QQLKASFWATLDAG Trigger: CCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCATCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | CATCAGCCTGATGGTGAGTGCCCACTGATGGGGCCCAGGGGCCAGTaGTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: HQPDGECPLMGPRGQ*SWQQLKASFWATLD Trigger: ATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCATCAGGCTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | GGGGTCACTGCAGCTGCTGAGGAGGTCCATAGAACAGGGAGGCTGTaGCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: GVTAAAEEVHRTGRL*QKGLILPSLCDGYR Trigger: CCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGCAGCTGCAGTGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | GGGCCCAGGGGCCAGTGCTCTTGGCAGCAGCTGAAGGCTTCATTCTaGGCTACCTTGGATGCTGGGTCTTCAGTTCAAGTTGTGGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: GPRGQCSWQQLKASF*ATLDAGSSVQVVVA Trigger: AGCTACCACAACTTGAACTGAAGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | ACCCAAGGAGAGAAGGCAGGGCATAGGAGTGTGGGCAAGGAAGCTTaGATCAAGCCTGTGGCTTCTCCCCCAGTAGACATCAGCCTGATG | + |
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Preference number: 1 (lower is better) Translates to: TQGEKAGHRSVGKEA*IKPVASPPVDISLM Trigger: CATCAGGCTGATGTCTACTGGGGGAGAAGCCACAGGCTTGATCCAAGCTTCCTTGCCCACACTCCTATGCCCTGCCTTCTCTCCTTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR TCA 90 bp | GTCTCCAAGCTGCCACAGAGCAGATGTGTCATCCAGTTGGCTGCTTaGTACAAGAGTATGCAGCTGCCAGTGGGTGAGCCAGGCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VSKLPQSRCVIQLAA*YKSMQLPVGEPGCE Trigger: CTCACAGCCTGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATCTGCTCTGTGGCAGCTTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | AGGAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTaGCCTCCCTGTGTGATGGGTACAGGCCATCCTTGTGCCAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: RRSIEQGGCAKRVSF*PPCVMGTGHPCASD Trigger: ATCACTGGCACAAGGATGGCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR TCA 90 bp | AACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTaGTGGGTACAGGCCATCCTTGTGCCAGTGATGACGAGCATTCAT | + |
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Preference number: 1 (lower is better) Translates to: NREAVPKGSHSALPV*WVQAILVPVMTSIH Trigger: ATGAATGCTCGTCATCACTGGCACAAGGATGGCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR TCA 90 bp | AATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTaGGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: NLKGTQLVKGSCPWL*VSCTQRKALPGGNG Trigger: GCCATTTCCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | AGTCCAGAGTCTCCAAGCTGCCACAGAGCAGATGTGTCATCCAGTTaGCTGCTTGATACAAGAGTATGCAGCTGCCAGTGGGTGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SPESPSCHRADVSSS*LLDTRVCSCQWVSQ Trigger: CTGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATCTGCTCTGTGGCAGCTTGGAGACTCTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | AACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTaGTATAACGCCTCTGATGGCACTCAGCTGCTCCAGTTTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: NSSSPTHPFWPGSRL*YNASDGTQLLQFFP Trigger: GGGGAAAAACTGGAGCAGCTGAGTGCCATCAGAGGCGTTATACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | CACAGAGCAGATGTGTCATCCAGTTGGCTGCTTGATACAAGAGTATaGAGCTGCCAGTGGGTGAGCCAGGCTGTGAGTGACAGCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: HRADVSSSWLLDTRV*SCQWVSQAVSDSSF Trigger: AAAGCTGCTGTCACTCACAGCCTGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATCTGCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | ATGGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTaGACAAGACAAATGGGCAACTCTTCATCCCCCACACATCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: MALGPLCMPTYPPCP*TRQMGNSSSPTHPF Trigger: GAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | CACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATaGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: HCVCPHIHRVLAQDK*ATLHPPHIPSGLDP Trigger: TGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR GCA 90 bp | GGTATCCATGTGGTCATCATGACATGGCTTTGGGGCCACTGTGTATaGCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAACT | + |
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Preference number: 1 (lower is better) Translates to: GIHVVIMTWLWGHCV*PHIHRVLAQDKWAT Trigger: AGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCACATGGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CCA 90 bp | ATCTTCCAAAAGTGTGGTATCCATGTGGTCATCATGACATGGCTTTaGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAA | + |
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Preference number: 1 (lower is better) Translates to: IFQKCGIHVVIMTWL*GHCVCPHIHRVLAQ Trigger: TTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCACATGGATACCACACTTTTGGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCGGGCCCAGGGGCCAGTaGTCTTGGCAGCAGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLGWVGSALQHLPGMHKAGPRGQ*SWQQLK Trigger: CTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCC...GGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCTCACAGTGGGCGTGGGCTAAGCAGTGTGAGCAGCAGGGTACCTTCAAAGGGCCCAGGGGCCAGTaGTCTTGGCAGCAGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASSQWAWAKQCEQQGTFKGPRGQ*SWQQLK Trigger: CTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCC...TTTGAAGGTACCCTGCTGCTCACACTGCTTAGCCCACGCCCACTGTGAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTATAACGCCATGGTGAGTGCCCACTaGTGGGGCCCAGGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSSPTHPFWPGSRLWYNAMVSAH*WGPGAS Trigger: ACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCAT...GGCGTTATACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTGCTGAGGAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTATGGTGAGTGCCCACTaGTGGGGCCCAGGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: AAAEEVHRTGRLCQKGLIMVSAH*WGPGAS Trigger: ACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCAT...AATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTAAGGGGCCAGTGCTCTTaGCAGCAGCTGAAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GQLFIPHTSLLAWIQTVVRGQCS*QQLKAS Trigger: TGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCT...TACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCTTGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGAACCTGCAACATTTGCCTaGCATGCACAAAGCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PALGCEYRAHREKPCLGEPATFA*HAQSQG Trigger: CCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGG...TTCCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGGAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCAGGTGTCATTGGACCTaGTCCTGGAGGCTTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: AEEVHRTGRLCQKGLILPRCHWT*SWRLWD Trigger: GTCCCAAAGCCTCCAGGATCAGGTCCAATGACACCT...GGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CAA 90 bp | AGGGAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTaGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: REKFKGHTAGQRLLP*AVSIVHTEKSPAWG Trigger: CCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCTTGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGAAGAGGCTTTGGGACAATaGTTCTTCGTTTCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PALGCEYRAHREKPCLGEEALGQ*FFVSRV Trigger: CACCCTGGAAACGAAGAAGCATTGTCCCAAAGCCTC...TTCCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTACCAGAGTCTCCAAGCTaGCACAGAGCAGATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GQLFIPHTSLLAWIQTVVPESPS*HRADVS Trigger: TGACACATCTGCTCTGTGGCAGCTTGGAGACTCTGG...TACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGCTGAAGGCTTCATTCTaGGCTACCTTGGATGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EVHRTGRLCQKGLILPSLLKASF*ATLDAG Trigger: CCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAG...CAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CAA 90 bp | CGTGTGACAGGAAGTCCTTGGGCAAAGCATAGTCTTGAGCAGTGCTaGTCAGGTGGGGTCACTGCAGCTGCTGAGGAGGTCCATAGAACA | + |
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Preference number: 2 (lower is better) Translates to: RVTGSPWAKHSLEQC*SGGVTAAAEEVHRT Trigger: TGTTCTATGGACCTCCTCAGCAGCTGCAGTGACCCCACCTGACAAGCACTGCTCAAGACTATGCTTTGCCCAAGGACTTCCTGTCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGAGACTGCCCGGGTGGACAGGGAGAAATTTAAAGGGCACACAGCTGGTCGGGTGGGATCAGCCCTaGAACATTTGCCTGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: KKRLPGWTGRNLKGTQLVGWDQP*NICLAC Trigger: GCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCC...GACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTCCACCCGGGCAGTCTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGGCGTGACAGGAAGTCCTTaGGCAAAGCATAGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GGCAKRVSFCPPCVMGTGVTGSP*AKHSLE Trigger: CTCAAGACTATGCTTTGCCCAAGGACTTCCTGTCAC...GCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAAGTATGCAGCTGCCAGTaGGTGAGCCAGGCTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: ATVYAHISTVSLHKTNGQVCSCQ*VSQAVS Trigger: ACTCACAGCCTGGCTCACCCACTGGCAGCTGCATAC...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAACCCACACATCCCTTCTaGCCTGGATCCAGACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ATVYAHISTVSLHKTNGQPTHPF*PGSRLW Trigger: CCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGG...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR CAA 90 bp | CATGGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTaGCACAAGACAAATGGGCAACTCTTCATCCCCCACACATCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HGFGATVYAHISTVS*HKTNGQLFIPHTSL Trigger: AAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCTCTGCCCTCCCTGTGTaGTGGGTACAGGCCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLSSLRKLRWEGYRFRVSALPV*WVQAIL Trigger: AAGGATGGCCTGTACCCATCACACAGGGAGGGCAGA...GACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGTGCTTAGTATGAAATaGTGGTCTGGGGTGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KWATLHPPHIPSGLDPDCVLSMK*WSGVGG Trigger: CCCACCCACCCCAGACCAGCATTTCATACTAAGCAC...ACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTCCAGAGTCTCCAAGCTaGCACAGAGCAGATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: DREKFKGHTAGQRLLPLAPESPS*HRADVS Trigger: TGACACATCTGCTCTGTGGCAGCTTGGAGACTCTGG...AGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGGACAGGAATCTGTCTaGTCCATCTTGGGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TNGQLFIPHTSLLAWIQTGQESV*SILGWK Trigger: CTTCCAGCCCAAGATGGAGCAGACAGATTCCTGTCC...AGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGGTGACAGGAAGTCCTTaGGCAAAGCATAGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: EVHRTGRLCQKGLILPSLVTGSP*AKHSLE Trigger: CTCAAGACTATGCTTTGCCCAAGGACTTCCTGTCAC...CAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAATCCATGTGGTCATCATaGCATGGCTTTGGGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: ATVYAHISTVSLHKTNGQSMWSS*HGFGAT Trigger: AGTGGCCCCAAAGCCATGTCATGATGACCACATGGA...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAAGTCCAGAGTCTCCAAGCTGCCACAGAGCAGATGTGTCATCCAGTTGGCTAGAACAGGGAGGCTGTaGCAAAAGGGTCTCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: GKSRVSKLPQSRCVIQLARTGRL*QKGLIL Trigger: CAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCT...AGCCAACTGGATGACACATCTGCTCTGTGGCAGCTTGGAGACTCTGGACTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCTATGAAATGCTGGTCTaGGGTGGGTGGGATCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSLSSLRKLRWEGYRFRVYEMLV*GGWDQP Trigger: GGGCTGATCCCACCCACCCCAGACCAGCATTTCATA...GACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTGAGTTCCCAGGTGCTAACTTaGTCTCAAGGGTACACTCAG | + |
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Preference number: 2 (lower is better) Translates to: EKFKGHTAGQRLLPLAVSSQVLT*SQGYTQ Trigger: CTGAGTGTACCCTTGAGATCAAGTTAGCACCTGGGA...ACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTCTGATGGCACTCAGCTaGTCCAGTTTTTCCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TNGQLFIPHTSLLAWIQTLMALS*SSFSPN Trigger: ATTTGGGGAAAAACTGGAGCAGCTGAGTGCCATCAG...AGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTCTGATGGCACTCAGCTaGTCCAGTTTTTCCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: KWATLHPPHIPSGLDPDCLMALS*SSFSPN Trigger: ATTTGGGGAAAAACTGGAGCAGCTGAGTGCCATCAG...ACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTTATCCACCGTGTCCTTaGACAAGACAAATGGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: DREKFKGHTAGQRLLPLAYPPCP*TRQMGN Trigger: GTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATA...AGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCACACAGAGAAAAGCCCTaGCTGGGGGAAATGGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VREYVTLLKCVAVWHSGSHREKP*LGEMAW Trigger: CCACGCCATTTCCCCCAGGCAGGGCTTTTCTCTGTG...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAGAAGGGGCCAGTGCTCTTaGCAGCAGCTGAAGGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ETLYSQHPWRTGHKQGKRRGQCS*QQLKAS Trigger: TGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCT...TCTTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCAAATGCTGGTCTGGGGTaGGTGGGATCAGCCCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: VREYVTLLKCVAVWHSGSNAGLG*VGSALQ Trigger: TTGCAGGGCTGATCCCACCCACCCCAGACCAGCATT...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAGAAGGTGTCATTGGACCTaGTCCTGGAGGCTTTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ETLYSQHPWRTGHKQGKRRCHWT*SWRLWD Trigger: GTCCCAAAGCCTCCAGGATCAGGTCCAATGACACCT...TCTTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CAA 90 bp | TATCTTCCAAAAGTGTGGTATCCATGTGGTCATCATGACATGGCTTaGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: YLPKVWYPCGHHDMA*GPLCMPTYPPCPCT Trigger: TGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCACATGGATACCACACTTTTGGAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAAAATATGTCACTTTGCTaGAATGTGTGGCAGTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ATVYAHISTVSLHKTNGQNMSLC*NVWQSG Trigger: GCCAGACTGCCACACATTTCAGCAAAGTGACATATT...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGAAGAGCCACTCTGTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCACCTGCAACATTTGCCTaGCATGCACAAAGCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CVKSHSVREYVTLLKCVAPATFA*HAQSQG Trigger: CCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGG...TGCCACACATTTCAGCAAAGTGACATATTCCCTTACAGAGTGGCTCTTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCAAGAACAGGGAGGCTGTaGCAAAAGGGTCTCATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VREYVTLLKCVAVWHSGSRTGRL*QKGLIL Trigger: CAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCT...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGAAGAGCCACTCTGTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCACAGCCCTGCAACATTTaGCTGGCATGCACAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CVKSHSVREYVTLLKCVAQPCNI*LACTKP Trigger: TGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTG...TGCCACACATTTCAGCAAAGTGACATATTCCCTTACAGAGTGGCTCTTCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCACTTAGTATGAAATGCTaGTCTGGGGTGGGTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: VREYVTLLKCVAVWHSGSLSMKC*SGVGGI Trigger: GATCCCACCCACCCCAGACCAGCATTTCATACTAAG...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGAAGAGCCACTCTGTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCATCCCAGGTGCTAACTTaGTCTCAAGGGTACACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CVKSHSVREYVTLLKCVASQVLT*SQGYTQ Trigger: CTGAGTGTACCCTTGAGATCAAGTTAGCACCTGGGA...TGCCACACATTTCAGCAAAGTGACATATTCCCTTACAGAGTGGCTCTTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGATAAGCCTTCAGCCTTACAAATCCATTGTTTTAACAGGCCCTTAAGGATTCACAGAGAAAAGCCCTaGCTGGGGGAAATGGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CDKPSALQIHCFNRPLRIHREKP*LGEMAW Trigger: CCACGCCATTTCCCCCAGGCAGGGCTTTTCTCTGTG...AATCCTTAAGGGCCTGTTAAAACAATGGATTTGTAAGGCTGAAGGCTTATCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCAGCATGAGCTACATATCATGTTTGAATCTAACCTAGGATACAGAACAAGATATCCACCGTGTCCTTaGACAAGACAAATGGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GQHELHIMFESNLGYRTRYPPCP*TRQMGN Trigger: GTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATA...TCTTGTTCTGTATCCTAGGTTAGATTCAAACATGATATGTAGCTCATGCTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GATGGTGAGTGCCCACTGATGGGGCCCAGGGGCCAGTaGTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGECPLMGPRGQ*SWQQLKASFWA Trigger: AGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCACAGGGGCCAGTGCTCTaGGCAGCAGCTGAAGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: WVGSALQHLPGMHKARGSQGPVL*AAAEGF Trigger: GAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTG...TGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR TCA 72 bp | GGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTaGGTATCGTGCACACAGAGAAAAGCCCTGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTQLVKGSCPWL*VSCTQRKALPG Trigger: CCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | TCTTCAGGTATGTTCACCAGAACGGCCTCCTCACAGTaGGCGTGGGCTAAGCAGTGTGAGCAGCAGGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: SSGMFTRTASSQ*AWAKQCEQQGT Trigger: GGTACCCTGCTGCTCACACTGCTTAGCCCACGCCCACTGTGAGGAGGCCGTTCTGGTGAACATACCTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | TCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTaGCATGCACAAAGCCAGGGGTTCAAGCTCAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: SGVGGISPATFA*HAQSQGFKLST Trigger: GGTACTGAGCTTGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGGAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCAGTCTTGAGCAGTGCTaGTCAGGTGGGGTCACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AEEVHRTGRLCQKGLILPSLEQC*SGGVTA Trigger: TGCAGTGACCCCACCTGACAAGCACTGCTCAAGACT...GGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR TCA 72 bp | GCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTaGTGGGTACAGGCCATCCTTGTGCCAGTGATGACG | + |
|
Preference number: 3 (lower is better) Translates to: AVPKGSHSALPV*WVQAILVPVMT Trigger: CGTCATCACTGGCACAAGGATGGCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GCAGCTGCTGAGGAGGTCCATAGAACAGGGAGGCTGTaGCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AAAEEVHRTGRL*QKGLILPSLCD Trigger: ATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | GAGAAGGCAGGGCATAGGAGTGTGGGCAAGGAAGCTTaGATCAAGCCTGTGGCTTCTCCCCCAGTAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: EKAGHRSVGKEA*IKPVASPPVDI Trigger: GATGTCTACTGGGGGAGAAGCCACAGGCTTGATCCAAGCTTCCTTGCCCACACTCCTATGCCCTGCCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATaGACAAAGCCAGGGGTTCAAGCTCAGTACCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGWDQPCNICLA*TKPGVQAQYLK Trigger: TTTGAGGTACTGAGCTTGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | TATGAAATGCTGGTCTGGGGTGGGTGGGATCAGCCCTaGAACATTTGCCTGGCATGCACAAAGCCAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YEMLVWGGWDQP*NICLACTKPGV Trigger: AACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACCAGCATTTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | TCATCCAGTTGGCTGCTTGATACAAGAGTATGCAGCTaGCAGTGGGTGAGCCAGGCTGTGAGTGACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSWLLDTRVCS*QWVSQAVSDSS Trigger: GCTGCTGTCACTCACAGCCTGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCATCCAGTTGGCTGCTaGATACAAGAGTATGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVWGGWDQPCNICLACTKHPVGC*IQEYAA Trigger: AGCTGCATACTCTTGTATCAAGCAGCCAACTGGATG...CTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTTCTGTCTGCTCCATCTaGGGCTGGAAGGTCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: KWATLHPPHIPSGLDPDCSVCSI*GWKVCT Trigger: AGTGCAGACCTTCCAGCCCAAGATGGAGCAGACAGA...ACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| 3UTR TCA 72 bp | CTGCCACAGAGCAGATGTGTCATCCAGTTGGCTGCTTaGTACAAGAGTATGCAGCTGCCAGTGGGTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPQSRCVIQLAA*YKSMQLPVGEP Trigger: TGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATCTGCTCTGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | ATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTaGCCTCCCTGTGTGATGGGTACAGGCCATCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IEQGGCAKRVSF*PPCVMGTGHPC Trigger: ACAAGGATGGCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GATGTGTCATCCAGTTGGCTGCTTGATACAAGAGTATaGAGCTGCCAGTGGGTGAGCCAGGCTGTGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DVSSSWLLDTRV*SCQWVSQAVSD Trigger: GTCACTCACAGCCTGGCTCACCCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTaGACAAGACAAATGGGCAACTCTTCATCCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GPLCMPTYPPCP*TRQMGNSSSPT Trigger: TGTGGGGGATGAAGAGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | GGCCAGTGCTCTTGGCAGCAGCTGAAGGCTTCATTCTaGGCTACCTTGGATGCTGGGTCTTCAGTTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GQCSWQQLKASF*ATLDAGSSVQV Trigger: AACTTGAACTGAAGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | TGCCCACATATCCACCGTGTCCTTGCACAAGACAAATaGGCAACTCTTCATCCCCCACACATCCCTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPHIHRVLAQDK*ATLHPPHIPSG Trigger: GCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTATAACGCCCTGATCCTGGAGGCTTaGGGACAATGCTTCTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSPTHPFWPGSRLWYNALILEA*GQCFFV Trigger: AACGAAGAAGCATTGTCCCAAAGCCTCCAGGATCAG...GGCGTTATACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | GCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTaGGTCTTCAGTTCAAGTTGTGGTAGCTTCCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AAEGFILGYLGC*VFSSSCGSFPG Trigger: ACCTGGGAAGCTACCACAACTTGAACTGAAGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | TCTCCAAGCTGCCACAGAGCAGATGTGTCATCCAGTTaGCTGCTTGATACAAGAGTATGCAGCTGCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPSCHRADVSSS*LLDTRVCSCQW Trigger: CCACTGGCAGCTGCATACTCTTGTATCAAGCAGCCAACTGGATGACACATCTGCTCTGTGGCAGCTTGGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTCTGATCCTGGAGGCTTaGGGACAATGCTTCTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: KWATLHPPHIPSGLDPDCLILEA*GQCFFV Trigger: AACGAAGAAGCATTGTCCCAAAGCCTCCAGGATCAG...ACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGATAGGCTCCCACTTGCTAGAGTTTCCTTTGGGAGCTAGGTGTCATTGGTCAGCCCTGCAACATTaGCCTGGCATGCACAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SKIGSHLLEFPLGARCHWSALQH*PGMHKA Trigger: GGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGA...CCAATGACACCTAGCTCCCAAAGGAAACTCTAGCAAGTGGGAGCCTATCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR TCA 72 bp | TCAGTTCAAGTTGTGGTAGCTTCCCAGGTGCTAACTTaGTCTCAAGGGTACACTCAGCTGCTCTCTAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SVQVVVASQVLT*SQGYTQLLSSP Trigger: GGGGCTAGAGAGCAGCTGAGTGTACCCTTGAGATCAAGTTAGCACCTGGGAAGCTACCACAACTTGAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | GTGGTCATCATGACATGGCTTTGGGGCCACTGTGTATaGCCACATATCCACCGTGTCCTTGCACAAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVIMTWLWGHCV*PHIHRVLAQDK Trigger: TTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | AAGTGTGGTATCCATGTGGTCATCATGACATGGCTTTaGGGCCACTGTGTATGCCCACATATCCACCGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KCGIHVVIMTWL*GHCVCPHIHRV Trigger: GACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCACATGGATACCACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | AGTGGCTCAAGCCTGTCATCCCTCAGGAAGTTAAGATaGGAAGGTTACAGGTTCAGGGTCAGCATGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SGSSLSSLRKLR*EGYRFRVSMSY Trigger: GTAGCTCATGCTGACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTTGAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCAGGGTGGAACAGATAATGGCACAAAGTGTTAAGAACCTCCAGGACTACAGTCTTGAGCAGTGCTaGTCAGGTGGGGTCACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSRVEQIMAQSVKNLQDYSLEQC*SGGVTA Trigger: TGCAGTGACCCCACCTGACAAGCACTGCTCAAGACT...GTAGTCCTGGAGGTTCTTAACACTTTGTGCCATTATCTGTTCCACCCTGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTGAGTATATCCACCGTGTCCTaGCACAAGACAAATGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EKFKGHTAGQRLLPLAVSISTVS*HKTNGQ Trigger: TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATAT...ACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGAGACTGCCCGGGTGGACAGGGAGAAATTTAAAGGGCACACAGCTGGTCATATCCACCGTGTCCTaGCACAAGACAAATGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KKRLPGWTGRNLKGTQLVISTVS*HKTNGQ Trigger: TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATAT...GACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTCCACCCGGGCAGTCTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | CCAGACTGTGGTATAACGCCTCTGATGGCACTCAGCTaGTCCAGTTTTTCCCCAAATATTCAGGCGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PDCGITPLMALS*SSFSPNIQAVS Trigger: TGAAACCGCCTGAATATTTGGGGAAAAACTGGAGCAGCTGAGTGCCATCAGAGGCGTTATACCACAGTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CCA 72 bp | ACTTCCCTCTGTCTCAAGAGTAGAAGCAATAGGTGCTaGTTCTGTAACAGGGAGCCATGTCTACAGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSLCLKSRSNRC*FCNREPCLQLE Trigger: CTCCAGCTGTAGACATGGCTCCCTGTTACAGAACCAGCACCTATTGCTTCTACTCTTGAGACAGAGGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAGCATGAGCTACATATCATGTTTGAATCTAACCTAGGATACAGAACAAGACAGGGGCCAGTGCTCTaGGCAGCAGCTGAAGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GQHELHIMFESNLGYRTRQGPVL*AAAEGF Trigger: GAAGCCTTCAGCTGCTGCCAAGAGCACTGGCCCCTG...TCTTGTTCTGTATCCTAGGTTAGATTCAAACATGATATGTAGCTCATGCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR TCA 72 bp | CTAGAGTTTCCTTTGGGAGCTAGGTGTCATTGGACCTaGTCCTGGAGGCTTTGGGACAATGCTTCTTCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LEFPLGARCHWT*SWRLWDNASSF Trigger: AAACGAAGAAGCATTGTCCCAAAGCCTCCAGGATCAGGTCCAATGACACCTAGCTCCCAAAGGAAACTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGAAGAGCCACTCTGTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGGGCAAAGCATAGTCTaGAGCAGTGCTTGTCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CVKSHSVREYVTLLKCVAGQSIV*SSACQV Trigger: CACCTGACAAGCACTGCTCAAGACTATGCTTTGCCC...TGCCACACATTTCAGCAAAGTGACATATTCCCTTACAGAGTGGCTCTTCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR GCA 72 bp | TTAACTTCCCTCTGTCTCAAGAGTAGAAGCAATAGGTaGTGGTTCTGTAACAGGGAGCCATGTCTACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LTSLCLKSRSNR*WFCNREPCLQL Trigger: CAGCTGTAGACATGGCTCCCTGTTACAGAACCAGCACCTATTGCTTCTACTCTTGAGACAGAGGGAAGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAGATTAGAGGGTCAAAAATaGTGTGAAGAGCCACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ETLYSQHPWRTGHKQGKRLEGQK*CEEPLC Trigger: ACAGAGTGGCTCTTCACACAATTTTTGACCCTCTAA...TCTTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGGTGCACACTGCTTCCTaGAGTGGGCAGGACCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVHRTGRLCQKGLILPSLVHTAS*SGQDPV Trigger: CACGGGGTCCTGCCCACTGCAGGAAGCAGTGTGCAC...CAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACGTGGGCAGGACCCCGTaGGCATGGCTGTGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLWGHCVCPHIHRVLAQDVGRTP*AWLCRR Trigger: TCTCCGACACAGCCATGCCCACGGGGTCCTGCCCAC...GTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGGTCTGTGGGCAGGACCCCGTaGGCATGGCTGTGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSWQQLKASFWATLDAGSVGRTP*AWLCRR Trigger: TCTCCGACACAGCCATGCCCACGGGGTCCTGCCCAC...AGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCTTGCCACCCCAACCTaGCTCCAGGAAGCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVWGGWDQPCNICLACTKLATPT*LQEAGS Trigger: GGATCCAGCTTCCTGGAGCCAGGTTGGGGTGGCAAG...CTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTCCCCCAGTAGACATCAGCCTGATGGTGAGTGCCCACTGATGGGGCCCGGACAGGAATCTGTCTaGTCCATCTTGGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSPSRHQPDGECPLMGPGQESV*SILGWK Trigger: CTTCCAGCCCAAGATGGAGCAGACAGATTCCTGTCC...GGGCCCCATCAGTGGGCACTCACCATCAGGCTGATGTCTACTGGGGGAGAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGGCTGGACAATGGAGAGGTaGGCTGCATCCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGCAKRVSFCPPCVMGTGWTMER*AASCCW Trigger: CCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCA...GCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGTGGAGGAGGGCTCACTaGGCTCAACTTGTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVWGGWDQPCNICLACTKWRRAH*AQLVSR Trigger: ACGGGACACAAGTTGAGCCCAGTGAGCCCTCCTCCA...CTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGTGGCCCCAACACTaGCACAAGTCTCTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGWVGSALQHLPGMHKARWPQH*HKSLQL Trigger: CAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCT...GGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGTCCTCTCCAGAACAGTaGAGTTTGCAGCGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLAAAEGFILGYLGCWSSPEQ*SLQRAQ Trigger: CTGCGCCCGCTGCAAACTCCACTGTTCTGGAGAGGA...CCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACATCCGTTGGGAAGGCTTaGAGCATCCCCAGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFGATVYAHISTVSLHKTSVGKA*SIPRNS Trigger: GCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGA...TGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCAAGCTCAGTACCTGTCGGAGACAACCCTaGGGGGCACTGGTAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPATFAWHAQSQGFKLSTCRRQP*GALVTA Trigger: TGCTGTTACCAGTGCCCCTCAGGGTTGTCTCCGACA...GGTACTGAGCTTGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGCTCCTTGCTGTTTTCTaGGGTGCTGATGTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGVGGISPATFAWHAQSQLLAVF*GADVRE Trigger: CTCCCTGACATCAGCACCTCAGAAAACAGCAAGGAG...CTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTGAGTGTGCACACTGCTTCCTaGAGTGGGCAGGACCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKFKGHTAGQRLLPLAVSVHTAS*SGQDPV Trigger: CACGGGGTCCTGCCCACTGCAGGAAGCAGTGTGCAC...ACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTATAACGCCTGGGCTGCATCCTGCTaGTGGTCCAGGCATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPTHPFWPGSRLWYNAWAASC*WSRHLP Trigger: TGGTAGATGCCTGGACCAGCAGCAGGATGCAGCCCA...GGCGTTATACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGGTCTTGGGCTGCATCCTGCTaGTGGTCCAGGCATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSWQQLKASFWATLDAGSWAASC*WSRHLP Trigger: TGGTAGATGCCTGGACCAGCAGCAGGATGCAGCCCA...AGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAGGTGGGCTGCATCCTaGTGCTGGTCCAGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: WLWGHCVCPHIHRVLAQDRWAAS*CWSRHL Trigger: TAGATGCCTGGACCAGCAGCAGGATGCAGCCCACCT...GTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCACAGTGGGCGTGGGCTAAGCAGTGTGAGCAGCAGGGTACCTTCAAAGATGGTAACAGCAGTTCCTaGCAGCCTCCCCTGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQWAWAKQCEQQGTFKDGNSSS*QPPLGS Trigger: ACTACCCAGGGGAGGCTGCCAGGAACTGCTGTTACC...ATCTTTGAAGGTACCCTGCTGCTCACACTGCTTAGCCCACGCCCACTGTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCAAGCTCAGTACCTCCTCTCCAGAACAGTaGAGTTTGCAGCGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPATFAWHAQSQGFKLSTSSPEQ*SLQRAQ Trigger: CTGCGCCCGCTGCAAACTCCACTGTTCTGGAGAGGA...GGTACTGAGCTTGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCAACAAGTCTCTACAGCTaGAGGAGGGCTCACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVGSALQHLPGMHKARGSTSLYS*RRAHWA Trigger: AGCCCAGTGAGCCCTCCTCCAGCTGTAGAGACTTGT...TGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAACTCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTATATTGGTGTGTTCCGTaGATACCCGGGGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLFIPHTSLLAWIQTVVYWCVP*IPGALE Trigger: CTCCAGAGCCCCGGGTATCCACGGAACACACCAATA...TACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGAGTTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| 3UTR CAA 72 bp | GGAAGTCCTTGGGCAAAGCATAGTCTTGAGCAGTGCTaGTCAGGTGGGGTCACTGCAGCTGCTGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPWAKHSLEQC*SGGVTAAAEEV Trigger: GACCTCCTCAGCAGCTGCAGTGACCCCACCTGACAAGCACTGCTCAAGACTATGCTTTGCCCAAGGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCATCCCCCACACATCCCTTCTGGCCTGGATCCAGACTGTGGTATAACGCCCAGTGCATGCCAGGCTaGCACTCACAGATTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPTHPFWPGSRLWYNAQCMPG*HSQIRG Trigger: TCCTCGAATCTGTGAGTGTCAGCCTGGCATGCACTG...GGCGTTATACCACAGTCTGGATCCAGGCCAGAAGGGATGTGTGGGGGATGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTGAGTAGCGGGCGCAGGAATTaGCTGCTGGTGTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKFKGHTAGQRLLPLAVSSGRRN*LLVCSS Trigger: ACTGCTGCACACCAGCAGTCAATTCCTGCGCCCGCT...ACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCACAGTGGGCGTGGGCTAAGCAGTGTGAGCAGCAGGGTACCTTCAAAGATCTGTGCCTGGAGACTTaGCAACCTCCTCTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSQWAWAKQCEQQGTFKDLCLET*QPPLQN Trigger: GTTCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAG...ATCTTTGAAGGTACCCTGCTGCTCACACTGCTTAGCCCACGCCCACTGTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTCCCCCAGTAGACATCAGCCTGATGGTGAGTGCCCACTGATGGGGCCCCTGTGTCGGCCTTCATaGTGTAGATTTTCTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSPSRHQPDGECPLMGPLCRPS*CRFSQS Trigger: GGATTGAGAAAATCTACATCATGAAGGCCGACACAG...GGGCCCCATCAGTGGGCACTCACCATCAGGCTGATGTCTACTGGGGGAGAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCTTGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGAACTTCTTTGCTGTGCCTaGAGACTTGACAACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PALGCEYRAHREKPCLGELLCCA*RLDNLL Trigger: GAGGAGGTTGTCAAGTCTCCAGGCACAGCAAAGAAG...TTCCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCCTTGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGGGACGAGGAAGATTCTaGAACCTTCACCAACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLAVSIVHTEKSPAWGGRGRF*NLHQLS Trigger: ACTGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCC...CCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAATGTCGGAGACAACCCTaGGGGGCACTGGTAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATVYAHISTVSLHKTNGQCRRQP*GALVTA Trigger: TGCTGTTACCAGTGCCCCTCAGGGTTGTCTCCGACA...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGGAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTCTGTGCCTGGAGACTTaGCAACCTCCTCTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DREKFKGHTAGQRLLPLALCLET*QPPLQN Trigger: GTTCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAG...AGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTTCAGGTATGTTCACCAGAACGGCCTCCTCACAGTGGGCGTGGGCTAAGTGTTTTCTGAGGTGCTaGTGTCAGGGAGTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSGMFTRTASSQWAWAKCFLRC*CQGVSL Trigger: CAGGGACACTCCCTGACATCAGCACCTCAGAAAACA...CTTAGCCCACGCCCACTGTGAGGAGGCCGTTCTGGTGAACATACCTGAAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGGTCTCTCCTTGCTGTTTTCTaGGGTGCTGATGTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSWQQLKASFWATLDAGSLLAVF*GADVRE Trigger: CTCCCTGACATCAGCACCTCAGAAAACAGCAAGGAG...AGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGGGGCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACGACGTAGTAGTCAGGTaGACACTGCTTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLWGHCVCPHIHRVLAQDDVVVR*TLLPAV Trigger: CACTGCAGGAAGCAGTGTGCACCTGACTACTACGTC...GTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAAGGTAACAGCAGTTCCTaGCAGCCTCCCCTGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVYAHISTVSLHKTNGQGNSSS*QPPLGS Trigger: ACTACCCAGGGGAGGCTGCCAGGAACTGCTGTTACC...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGATAGGCTCCCACTTGCTAGAGTTTCCTTTGGGAGCTAGGTGTCATTGGGCAGCTGCCCAGAGGTaGTTCTGTCTCCTGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKIGSHLLEFPLGARCHWAAAQR*FCLLLR Trigger: CCGGAGCAGGAGACAGAACCACCTCTGGGCAGCTGC...CCAATGACACCTAGCTCCCAAAGGAAACTCTAGCAAGTGGGAGCCTATCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTGGCAGCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGGTCTCTGGCTCCAGGAAGCTaGATCCAGAAATGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSWQQLKASFWATLDAGSLAPGS*IQKWCS Trigger: GGAACACCATTTCTGGATCCAGCTTCCTGGAGCCAG...AGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGCTGCCAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAGACACTGCTTCCTGCAGTaGGCAGGACCCCGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETLYSQHPWRTGHKQGKRHCFLQ*AGPRGH Trigger: ATGCCCACGGGGTCCTGCCCACTGCAGGAAGCAGTG...TCTTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGATAGGCTCCCACTTGCTAGAGTTTCCTTTGGGAGCTAGGTGTCATTGGCCAGTAGCACCACCATaGCCACCCAGAAGAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SKIGSHLLEFPLGARCHWPVAPP*PPRRAR Trigger: CCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGG...CCAATGACACCTAGCTCCCAAAGGAAACTCTAGCAAGTGGGAGCCTATCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGGAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGCTCTGGAGGTTCCCTaGGAGAAAAAGGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DREKFKGHTAGQRLLPLAALEVP*EKKDSQ Trigger: CTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGC...AGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTCCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| 3UTR CAA 72 bp | TTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTaGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKGHTAGQRLLP*AVSIVHTEKSP Trigger: AGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | CTTCGTGTTCAGGACCTCTCACTACTCAACTCTGTGATAAGCCTTCAGCCTTACTCCGTTGGGAAGGCTTaGAGCATCCCCAGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQDLSLLNSVISLQPYSVGKA*SIPRNS Trigger: GCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGA...GTAAGGCTGAAGGCTTATCACAGAGTTGAGTAGTGAGAGGTCCTGAACACGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCAAGCGGGCGCAGGAATTaGCTGCTGGTGTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VREYVTLLKCVAVWHSGSSGRRN*LLVCSS Trigger: ACTGCTGCACACCAGCAGTCAATTCCTGCGCCCGCT...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGAAGGCTTCATTCTGGGCTACCTTGGATGCTGGGTCTTCAGTTCAAGTGACGTAGTAGTCAGGTaGACACTGCTTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAEGFILGYLGCWVFSSSDVVVR*TLLPAV Trigger: CACTGCAGGAAGCAGTGTGCACCTGACTACTACGTC...ACTTGAACTGAAGACCCAGCATCCAAGGTAGCCCAGAATGAAGCCTTCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCAGGTGTGCAGCAGTGCATaGCAGGCTGACACTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPVIPQEVKMGRLQVQGQVCSSA*QADTHR Trigger: TCTGTGAGTGTCAGCCTGGCATGCACTGCTGCACAC...CTGACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTGTTCAGGACCTCTCACTACTCAACTCTGTGATAAGCCTTCAGCCTTACCTTCTCCACAAGGCCTaGCAAACAGGTCACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQDLSLLNSVISLQPYLLHKA*QTGHAG Trigger: GCCTGCGTGACCTGTTTGCCAGGCCTTGTGGAGAAG...GTAAGGCTGAAGGCTTATCACAGAGTTGAGTAGTGAGAGGTCCTGAACACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCGTCAGGGAGTGTCCCTaGAGATGGAAGCTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLSSLRKLRWEGYRFRVVRECP*RWKLQG Trigger: ACCTTGGAGCTTCCATCTCCAGGGACACTCCCTGAC...GACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAGACCAGTAGCACCACCATaGCCACCCAGAAGAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ETLYSQHPWRTGHKQGKRPVAPP*PPRRAR Trigger: CCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGG...TCTTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACCCTTTATTCCCAGCATCCTTGGAGGACAGGACATAAACAGGGAAAAAAGGTGGGCTGCATCCTaGTGCTGGTCCAGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRPFIPSILGGQDINREKRWAAS*CWSRHL Trigger: TAGATGCCTGGACCAGCAGCAGGATGCAGCCCACCT...TTTTTCCCTGTTTATGTCCTGTCCTCCAAGGATGCTGGGAATAAAGGGTCTCTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGACCTCTCACTACTCAACTCTGTGATAAGCCTTCAGCCTTACAAATCCCTTCTCCACAAGGCCTaGCAAACAGGTCACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQDLSLLNSVISLQPYKSLLHKA*QTGHAG Trigger: GCCTGCGTGACCTGTTTGCCAGGCCTTGTGGAGAAG...GGATTTGTAAGGCTGAAGGCTTATCACAGAGTTGAGTAGTGAGAGGTCCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAACTTCTTTGCTGTGCCTaGAGACTTGACAACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATVYAHISTVSLHKTNGQLLCCA*RLDNLL Trigger: GAGGAGGTTGTCAAGTCTCCAGGCACAGCAAAGAAG...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGCCATCCTTGTGCCAGTGATGACGAGCATTCATTCTTTAACTTCCCTGTCAGGGAGTGTCCCTaGAGATGGAAGCTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGHPCASDDEHSFFNFPVRECP*RWKLQG Trigger: ACCTTGGAGCTTCCATCTCCAGGGACACTCCCTGAC...AGGGAAGTTAAAGAATGAATGCTCGTCATCACTGGCACAAGGATGGCCTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGACCTCTCACTACTCAACTCTGTGATAAGCCTTCAGCCTTACAAATCCTGGACAATGGAGAGGTaGGCTGCATCCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQDLSLLNSVISLQPYKSWTMER*AASCCW Trigger: CCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCA...GGATTTGTAAGGCTGAAGGCTTATCACAGAGTTGAGTAGTGAGAGGTCCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GGTATAACGCCTCTGATGGCACTCAGCTGCTCCAGTTTTTCCCCAAATATTCAGAAAAGGATTCCCAGCTaGGCTGTCATCCAGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GITPLMALSCSSFSPNIQKRIPS*AVIQQR Trigger: CCGCTGCTGGATGACAGCCCAGCTGGGAATCCTTTT...CTGAATATTTGGGGAAAAACTGGAGCAGCTGAGTGCCATCAGAGGCGTTATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCAGTCAGTAGCATCTTCCTaGACAAGGTTGGTGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVIPQEVKMGRLQVQGQSVASS*TRLVTR Trigger: GCGTGTCACCAACCTTGTGCAGGAAGATGCTACTGA...CTGACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| 3UTR CAA 72 bp | AAAGTGTGGTATCCATGTGGTCATCATGACATGGCTTaGGGGCCACTGTGTATGCCCACATATCCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVWYPCGHHDMA*GPLCMPTYPPC Trigger: ACACGGTGGATATGTGGGCATACACAGTGGCCCCAAAGCCATGTCATGATGACCACATGGATACCACACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTTAAAGGGCACACAGCTGGTCAAAGGCTCCTGCCCTTGGCTGTGAGTGGTCATATTCTTCTCTaGATTACCTGGATCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EKFKGHTAGQRLLPLAVSGHILL*ITWIWT Trigger: AGTCCAGATCCAGGTAATGCAGAGAAGAATATGACC...ACTCACAGCCAAGGGCAGGAGCCTTTGACCAGCTGTGTGCCCTTTAAATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAGGGTCAGCATGAGCTACATATCATGTTTGAATCTAACCTAGGATACAGATGTTTTCTGAGGTGCTaGTGTCAGGGAGTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGQHELHIMFESNLGYRCFLRC*CQGVSL Trigger: CAGGGACACTCCCTGACATCAGCACCTCAGAAAACA...TCTGTATCCTAGGTTAGATTCAAACATGATATGTAGCTCATGCTGACCCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCAGCATGAGCTACATATCTCTCAATCCTGTTATTaGTGTGTTCCGTGGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: QEVKMGRLQVQGQHELHISQSCY*CVPWIP Trigger: GGGTATCCACGGAACACACCAATAACAGGATTGAGA...GATATGTAGCTCATGCTGACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAGGGTGGAACAGATAATGGCACAAAGTGTTAAGAACCTCCAGGACTACGGTCATATTCTTCTCTaGATTACCTGGATCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVEQIMAQSVKNLQDYGHILL*ITWIWT Trigger: AGTCCAGATCCAGGTAATGCAGAGAAGAATATGACC...GTAGTCCTGGAGGTTCTTAACACTTTGTGCCATTATCTGTTCCACCCTGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATAAGCCTTCAGCCTTACAAATCCATTGTTTTAACAGGCCCTTAAGGATTTCAGTAGCATCTTCCTaGACAAGGTTGGTGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: CDKPSALQIHCFNRPLRISVASS*TRLVTR Trigger: GCGTGTCACCAACCTTGTGCAGGAAGATGCTACTGA...AATCCTTAAGGGCCTGTTAAAACAATGGATTTGTAAGGCTGAAGGCTTATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGGTCAGCATGAGCTACATATCATGTTTGAATCTAACCTAGGATACAGAGGACGAGGAAGATTCTaGAACCTTCACCAACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQGQHELHIMFESNLGYRGRGRF*NLHQLS Trigger: ACTGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCC...TCTGTATCCTAGGTTAGATTCAAACATGATATGTAGCTCATGCTGACCCTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | TACCCGGGGCTCTGGAGGTTCCCTGGGAGAAAAAGGATTCCCAGCTaGGCTGTCATCCAGCAGCGGCAGGTTCTCCAGGTAGGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPGLWRFPGRKRIPS*AVIQQRQVLQVGGP Trigger: GGGGCCACCTACCTGGAGAACCTGCCGCTGCTGGATGACAGCCCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGCCCCGGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS TCA 90 bp | TCTCCGGCACAGGTGGTCTTGAGTGGTCGATCCGTTGGGAAGGCTTaGAGCATCCCCAGGAACAGCAACCCCGCTGCGGTGAGTAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPAQVVLSGRSVGKA*SIPRNSNPAAVSRA Trigger: CGCCCTACTCACCGCAGCGGGGTTGCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGATCGACCACTCAAGACCACCTGTGCCGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | TCCCAGCTGGGCTGTCATCCAGCAGCGGCAGGTTCTCCAGGTAGGTaGCCCCAACACTGGCACAAGTCTCTACAGCTGGAGGAGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQLGCHPAAAGSPGR*PQHWHKSLQLEEGS Trigger: TGAGCCCTCCTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTACCTGGAGAACCTGCCGCTGCTGGATGACAGCCCAGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | AGTAACACAGGAGAAAGGAGCCGGAGCCAACCAGTAGCACCACCATaGCCACCCAGAAGAGCACGGGCCCTTGCCACCCCAACCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNTGERSRSQPVAPP*PPRRARALATPTWL Trigger: GAGCCAGGTTGGGGTGGCAAGGGCCCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGGTTGGCTCCGGCTCCTTTCTCCTGTGTTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | CATCAGCCTGATGGTGAGTGCCCACTGATGGGGCCCAGGGGCCAGTGCTCTTGGCCCGGATTGGAGCAATaGGGACCAGATCCCGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HQPDGECPLMGPRGQCSWPGLEQ*GPDPEE Trigger: TTCCTCGGGATCTGGTCCCAATTGCTCCAATCCGGG...CCAAGAGCACTGGCCCCTGGGCCCCATCAGTGGGCACTCACCATCAGGCTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | CCACCCAGAAGAGCACGGGCCCTGGATCCAGAAATGGTGTTCCCGTaGACAATGGAGAGGTGGGCTGCATCCTGCTGCTGGTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPRRARALDPEMVFP*TMERWAASCCWSRH Trigger: ATGCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGGGCCCGTGCTCTTCTGGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | CACCACCATGGCCACCCAGAAGAGCACGGGCCCTGGATCCAGAAATaGTGTTCCCGTGGACAATGGAGAGGTGGGCTGCATCCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHHGHPEEHGPWIQK*CSRGQWRGGLHPAA Trigger: AGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGGGCCCGTGCTCTTCTGGGTGGCCATGGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | GGCCCTTGCCACCCCAACCTGGCTCCAGGAAGCTGGATCCAGAAATaGTGTTCCCGTGGACAATGGAGAGGTGGGCTGCATCCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPCHPNLAPGSWIQK*CSRGQWRGGLHPAA Trigger: AGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGCTTCCTGGAGCCAGGTTGGGGTGGCAAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS GCA 90 bp | CCAGAAATGGTGTTCCCGTGGACAATGGAGAGGTGGGCTGCATCCTaGTGCTGGTCCAGGCATCTACCACAAGGCTTAGGGTGGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PEMVFPWTMERWAAS*CWSRHLPQGLGWRR Trigger: CCGCCTCCACCCTAAGCCTTGTGGTAGATGCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | CTCCCCTGGGTAGTGGCTGAGGTCTCCGGCACAGGTGGTCTTGAGTaGTCGATCCGTTGGGAAGGCTTGAAGCATCCCCAGGAACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPWVVAEVSGTGGLE*SIRWEGLKHPQEQQ Trigger: TTGCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGATCGACCACTCAAGACCACCTGTGCCGGAGACCTCAGCCACTACCCAGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | GTTCTCCAGGTAGGTGGCCCCAACACTGGCACAAGTCTCTACAGCTaGAGGAGGGCTCACTGGGCTCAACTTGTGTCCCGTGCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLQVGGPNTGTSLYS*RRAHWAQLVSRAGI Trigger: GATCCCAGCACGGGACACAAGTTGAGCCCAGTGAGCCCTCCTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTACCTGGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | TGTCATCCAGCAGCGGCAGGTTCTCCAGGTAGGTGGCCCCAACACTaGCACAAGTCTCTACAGCTGGAGGAGGGCTCACTGGGCTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: CHPAAAGSPGRWPQH*HKSLQLEEGSLGST Trigger: AGTTGAGCCCAGTGAGCCCTCCTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTACCTGGAGAACCTGCCGCTGCTGGATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | CCCCAACCTGGCTCCAGGAAGCTGGATCCAGAAATGGTGTTCCCGTaGACAATGGAGAGGTGGGCTGCATCCTGCTGCTGGTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQPGSRKLDPEMVFP*TMERWAASCCWSRH Trigger: ATGCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGCTTCCTGGAGCCAGGTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCCTGGGCTCCCTTGCCTaGGACGAGGAAGATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLGWVGSALQHLPGMHKALGSLA*DEEDSG Trigger: TCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAG...GGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCCTTGGCTGTGAGTATCGTGCACACAGAGAAAAGCCCTGCCTGGGGGCTGGACTGGGCTCCCTaGCCTTGGACGAGGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLAVSIVHTEKSPAWGLDWAP*PWTRKI Trigger: AATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAG...CCCCCAGGCAGGGCTTTTCTCTGTGTGCACGATACTCACAGCCAAGGGCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS TCA 90 bp | GGCCTGGCAAACAGGTCACGCAGGCTGTGCACTTCCCGTCTTCATTaGCGTAGTAGTCAGGTGCACACTGCTTCCTGCAGTGGGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLANRSRRLCTSRLH*RSSQVHTASCSGQD Trigger: GTCCTGCCCACTGCAGGAAGCAGTGTGCACCTGACTACTACGTCAATGAAGACGGGAAGTGCACAGCCTGCGTGACCTGTTTGCCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | CGGGCCCTGGATCCAGAAATGGTGTTCCCGTGGACAATGGAGAGGTaGGCTGCATCCTGCTGCTGGTCCAGGCATCTACCACAAGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RALDPEMVFPWTMER*AASCCWSRHLPQGL Trigger: TAAGCCTTGTGGTAGATGCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCACAGTGGGCGTGGGCTAAGCAGTGTGAGCAGCAGGGTACCTTCAAATTGGCAGCAAGCTCCTaGCACTGTCATTGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSQWAWAKQCEQQGTFKLAASS*HCHWLG Trigger: CCCCAGCCAATGACAGTGCAAGGAGCTTGCTGCCAA...TTTGAAGGTACCCTGCTGCTCACACTGCTTAGCCCACGCCCACTGTGAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGGCCTGGACTGGGCTCCCTaGCCTTGGACGAGGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: GGCAKRVSFCPPCVMGTGLDWAP*PWTRKI Trigger: AATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAG...GCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS TCA 90 bp | CAACCTCCTCTCCAGAACAGTGGAGTTTGCAGCGGGCGCAGGAATTaGCTGCTGGTGTGCAGCAGTGCATGCCAGGCTGACACTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPPLQNSGVCSGRRN*LLVCSSACQADTHR Trigger: TCTGTGAGTGTCAGCCTGGCATGCACTGCTGCACACCAGCAGTCAATTCCTGCGCCCGCTGCAAACTCCACTGTTCTGGAGAGGAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | GATTCGAGGAGAGTTCCCGGAACACGGAGCCTTCTCCACAAGGCCTaGCAAACAGGTCACGCAGGCTGTGCACTTCCCGTCTTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DSRRVPGTRSLLHKA*QTGHAGCALPVFID Trigger: GTCAATGAAGACGGGAAGTGCACAGCCTGCGTGACCTGTTTGCCAGGCCTTGTGGAGAAGGCTCCGTGTTCCGGGAACTCTCCTCGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | AGTAACACAGGAGAAAGGAGCCGGAGCCAACCAGTAGCACCACCATaGCCACCCAGAAGAGCACGGGCCCTGGATCCAGAAATGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNTGERSRSQPVAPP*PPRRARALDPEMVF Trigger: GAACACCATTTCTGGATCCAGGGCCCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGGTTGGCTCCGGCTCCTTTCTCCTGTGTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 90 bp | TGTTATTGGTGTGTTCCGTGGATACCCGGGGCTCTGGAGGTTCCCTaGGAGAAAAAGGATTCCCAGCTGGGCTGTCATCCAGCAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CYWCVPWIPGALEVP*EKKDSQLGCHPAAA Trigger: TGCCGCTGCTGGATGACAGCCCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGCCCCGGGTATCCACGGAACACACCAATAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGTGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGATCCGTTGGGAAGGCTaGAAGCATCCCCAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SGVGGISPATFAWHAQSQIRWEG*KHPQEQ Trigger: CTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGAT...CTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCACCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGGCGCTGTGCCTGGAGACTaGACAACCTCCTCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGCAKRVSFCPPCVMGTGAVPGD*TTSSPE Trigger: TTCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAGC...GCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGTGCCAAAAGGGTCTCATTCTGCCCTCCCTGTGTGATGGGTACAGGCTCTTCCTGCACAAGGTaGGTGACACGCATTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGCAKRVSFCPPCVMGTGSSCTR*VTRIGS Trigger: GCTGCCAATGCGTGTCACCAACCTTGTGCAGGAAGA...GCCTGTACCCATCACACAGGGAGGGCAGAATGAGACCCTTTTGGCACAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCTGTCATCCCTCAGGAAGTTAAGATGGGAAGGTTACAGGTTCAGGGTCGAAGAGCACGGGCCCTaGCCACCCCAACCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSSLRKLRWEGYRFRVEEHGP*PPQPGS Trigger: GGAGCCAGGTTGGGGTGGCAAGGGCCCGTGCTCTTC...GACCCTGAACCTGTAACCTTCCCATCTTAACTTCCTGAGGGATGACAGGCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCTGAGGAGGTCCATAGAACAGGGAGGCTGTGCCAAAAGGGTCTCATTTTGGCAGCAAGCTCCTaGCACTGTCATTGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAEEVHRTGRLCQKGLILAASS*HCHWLG Trigger: CCCCAGCCAATGACAGTGCAAGGAGCTTGCTGCCAA...AATGAGACCCTTTTGGCACAGCCTCCCTGTTCTATGGACCTCCTCAGCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGATCAGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCATCTTCCTGCACAAGGTaGGTGACACGCATTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVGSALQHLPGMHKARGSSSCTR*VTRIGS Trigger: GCTGCCAATGCGTGTCACCAACCTTGTGCAGGAAGA...TGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCTGATCCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | AGATCTTCAGGTATGTTCACCAGAACGGCCTCCTCACAGTGGGCGTGGGCTAAGCTGGGCTCCCTTGCCTaGGACGAGGAAGATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSSGMFTRTASSQWAWAKLGSLA*DEEDSG Trigger: TCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAG...CTTAGCCCACGCCCACTGTGAGGAGGCCGTTCTGGTGAACATACCTGAAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGCAACATTTGCCTGGCATGCACAAAGCCAGGGGTTCAAGCTCAGTACCGGGTGGAGGCGGTACTaGCAGGCTCCTTGCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPATFAWHAQSQGFKLSTGWRRY*QAPCCF Trigger: AAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACCC...GGTACTGAGCTTGAACCCCTGGCTTTGTGCATGCCAGGCAAATGTTGCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | AGGAAGCTGGATCCAGAAATGGTGTTCCCGTGGACAATGGAGAGGTaGGCTGCATCCTGCTGCTGGTCCAGGCATCTACCACAAGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKLDPEMVFPWTMER*AASCCWSRHLPQGL Trigger: TAAGCCTTGTGGTAGATGCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | TTTCTCAATCCTGTTATTGGTGTGTTCCGTGGATACCCGGGGCTCTaGAGGTTCCCTGGGAGAAAAAGGATTCCCAGCTGGGCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FLNPVIGVFRGYPGL*RFPGRKRIPSWAVI Trigger: GATGACAGCCCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGCCCCGGGTATCCACGGAACACACCAATAACAGGATTGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS-3UTR CAA 90 bp | GCCACTGTGTATGCCCACATATCCACCGTGTCCTTGCACAAGACAAATGGGCAAGCTGTGCCTGGAGACTaGACAACCTCCTCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ATVYAHISTVSLHKTNGQAVPGD*TTSSPE Trigger: TTCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAGC...TTGCCCATTTGTCTTGTGCAAGGACACGGTGGATATGTGGGCATACACAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS GCA 90 bp | GGTCATATTCTTCTCTGCATTACCTGGATCTGGACTGGGCTCCCTTaGCTTGGACGAGGAAGATTCTGGAACCTTCACCAACTCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHILLCITWIWTGLP*LGRGRFWNLHQLSS Trigger: GCTACTGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATATGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 90 bp | GAAGCTCCAAGGTCATATTCTTCTCTGCATTACCTGGATCTGGACTaGGCTCCCTTGCCTTGGACGAGGAAGATTCTGGAACCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EAPRSYSSLHYLDLD*APLPWTRKILEPSP Trigger: TGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATATGACCTTGGAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 90 bp | AGATGGAAGCTCCAAGGTCATATTCTTCTCTGCATTACCTGGATCTaGACTGGGCTCCCTTGCCTTGGACGAGGAAGATTCTGGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWKLQGHILLCITWI*TGLPCLGRGRFWNL Trigger: AAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATATGACCTTGGAGCTTCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTGAAGAGCCACTCTGTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGGGTGGAGGCGGTACTaGCAGGCTCCTTGCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CVKSHSVREYVTLLKCVAGWRRY*QAPCCF Trigger: AAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACCC...TGCCACACATTTCAGCAAAGTGACATATTCCCTTACAGAGTGGCTCTTCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAATATGTCACTTTGCTGAAATGTGTGGCAGTCTGGCATAGTGGCTCAGTACTTGCAGGCTCCTaGCTGTTTTCTGAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VREYVTLLKCVAVWHSGSVLAGS*LFSEVL Trigger: CAGCACCTCAGAAAACAGCAAGGAGCCTGCAAGTAC...TGAGCCACTATGCCAGACTGCCACACATTTCAGCAAAGTGACATATTCCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGCATGAGCTACATATCATGTTTGAATCTAACCTAGGATACAGAACAAGAATCCGTTGGGAAGGCTaGAAGCATCCCCAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GQHELHIMFESNLGYRTRIRWEG*KHPQEQ Trigger: CTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGAT...TCTTGTTCTGTATCCTAGGTTAGATTCAAACATGATATGTAGCTCATGCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAACATTAAAAGCAGATCTTCAGGTATGTTCACCAGAACGGCCTCCTCAGTACTTGCAGGCTCCTaGCTGTTTTCTGAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQNIKSRSSGMFTRTASSVLAGS*LFSEVL Trigger: CAGCACCTCAGAAAACAGCAAGGAGCCTGCAAGTAC...TGAGGAGGCCGTTCTGGTGAACATACCTGAAGATCTGCTTTTAATGTTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | GGAGAAAGGAGCCGGAGCCAACCAGTAGCACCACCATaGCCACCCAGAAGAGCACGGGCCCTTGCCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GERSRSQPVAPP*PPRRARALATP Trigger: TGGGGTGGCAAGGGCCCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGGTTGGCTCCGGCTCCTTTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | GGGCCCTGGATCCAGAAATGGTGTTCCCGTGGACAATaGAGAGGTGGGCTGCATCCTGCTGCTGGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPWIQKWCSRGQ*RGGLHPAAGPG Trigger: GCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 72 bp | GGAGAAAGGAGCCGGAGCCAACCAGTAGCACCACCATaGCCACCCAGAAGAGCACGGGCCCTGGATCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GERSRSQPVAPP*PPRRARALDPE Trigger: TTCTGGATCCAGGGCCCGTGCTCTTCTGGGTGGCCATGGTGGTGCTACTGGTTGGCTCCGGCTCCTTTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS CCA 72 bp | GCAGCGGCAGGTTCTCCAGGTAGGTGGCCCCAACACTaGCACAAGTCTCTACAGCTGGAGGAGGGCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AAAGSPGRWPQH*HKSLQLEEGSL Trigger: CAGTGAGCCCTCCTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTACCTGGAGAACCTGCCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS CCA 72 bp | CCACCCAGAAGAGCACGGGCCCTTGCCACCCCAACCTaGCTCCAGGAAGCTGGATCCAGAAATGGTGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPRRARALATPT*LQEAGSRNGVP Trigger: GGGAACACCATTTCTGGATCCAGCTTCCTGGAGCCAGGTTGGGGTGGCAAGGGCCCGTGCTCTTCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
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| CDS CCA 72 bp | GGCCACCCAGAAGAGCACGGGCCCTGGATCCAGAAATaGTGTTCCCGTGGACAATGGAGAGGTGGGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHPEEHGPWIQK*CSRGQWRGGLH Trigger: ATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGGGCCCGTGCTCTTCTGGGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS CCA 72 bp | GGCTGTCATCCAGCAGCGGCAGGTTCTCCAGGTAGGTaGCCCCAACACTGGCACAAGTCTCTACAGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCHPAAAGSPGR*PQHWHKSLQLE Trigger: CTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTACCTGGAGAACCTGCCGCTGCTGGATGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS TCA 72 bp | CTCCAGAACAGTGGAGTTTGCAGCGGGCGCAGGAATTaGCTGCTGGTGTGCAGCAGTGCATGCCAGGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQNSGVCSGRRN*LLVCSSACQAD Trigger: GTCAGCCTGGCATGCACTGCTGCACACCAGCAGTCAATTCCTGCGCCCGCTGCAAACTCCACTGTTCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | GTCTCCGGCACAGGTGGTCTTGAGTGGTCGATCCGTTaGGAAGGCTTGAAGCATCCCCAGGAACAGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: VSGTGGLEWSIR*EGLKHPQEQQP Trigger: GGGTTGCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGATCGACCACTCAAGACCACCTGTGCCGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | GTAGGTGGCCCCAACACTGGCACAAGTCTCTACAGCTaGAGGAGGGCTCACTGGGCTCAACTTGTGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VGGPNTGTSLYS*RRAHWAQLVSR Trigger: ACGGGACACAAGTTGAGCCCAGTGAGCCCTCCTCCAGCTGTAGAGACTTGTGCCAGTGTTGGGGCCACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS CCA 72 bp | GGAAGCTGGATCCAGAAATGGTGTTCCCGTGGACAATaGAGAGGTGGGCTGCATCCTGCTGCTGGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSWIQKWCSRGQ*RGGLHPAAGPG Trigger: GCCTGGACCAGCAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
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| CDS CAA 72 bp | ACAGGTGGTCTTGAGTGGTCGATCCGTTGGGAAGGCTaGAAGCATCCCCAGGAACAGCAACCCCGCTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGGLEWSIRWEG*KHPQEQQPRCG Trigger: ACCGCAGCGGGGTTGCTGTTCCTGGGGATGCTTCAAGCCTTCCCAACGGATCGACCACTCAAGACCACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS TCA 72 bp | GGTGGAGGCGGTACTTGCAGGCTCCTTGCTGTTTTCTaGGGTGCTGATGTCAGGGAGTGTCCCTGGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGGTCRLLAVF*GADVRECPWRW Trigger: CCATCTCCAGGGACACTCCCTGACATCAGCACCTCAGAAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS GCA 72 bp | TGTGCACTTCCCGTCTTCATTGACGTAGTAGTCAGGTaGACACTGCTTCCTGCAGTGGGCAGGACCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CALPVFIDVVVR*TLLPAVGRTPW Trigger: CCACGGGGTCCTGCCCACTGCAGGAAGCAGTGTGCACCTGACTACTACGTCAATGAAGACGGGAAGTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | ACAGTGGAGTTTGCAGCGGGCGCAGGAATTGACTGCTaGTGTGCAGCAGTGCATGCCAGGCTGACACTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TVEFAAGAGIDC*CAAVHARLTLT Trigger: TGTGAGTGTCAGCCTGGCATGCACTGCTGCACACCAGCAGTCAATTCCTGCGCCCGCTGCAAACTCCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | CTCTGGAGGTTCCCTGGGAGAAAAAGGATTCCCAGCTaGGCTGTCATCCAGCAGCGGCAGGTTCTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LWRFPGRKRIPS*AVIQQRQVLQV Trigger: TACCTGGAGAACCTGCCGCTGCTGGATGACAGCCCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 72 bp | TGTGTTCCGTGGATACCCGGGGCTCTGGAGGTTCCCTaGGAGAAAAAGGATTCCCAGCTGGGCTGTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: CVPWIPGALEVP*EKKDSQLGCHP Trigger: TGGATGACAGCCCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGCCCCGGGTATCCACGGAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CCA 72 bp | CACCCCAACCTGGCTCCAGGAAGCTGGATCCAGAAATaGTGTTCCCGTGGACAATGGAGAGGTGGGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HPNLAPGSWIQK*CSRGQWRGGLH Trigger: ATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGGATCCAGCTTCCTGGAGCCAGGTTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | TGCTGCTGGTCCAGGCATCTACCACAAGGCTTAGGGTaGAGGCGGTACTTGCAGGCTCCTTGCTGTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCWSRHLPQGLG*RRYLQAPCCFL Trigger: CAGAAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACCCTAAGCCTTGTGGTAGATGCCTGGACCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | CCTGTTATTGGTGTGTTCCGTGGATACCCGGGGCTCTaGAGGTTCCCTGGGAGAAAAAGGATTCCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVIGVFRGYPGL*RFPGRKRIPSW Trigger: CCAGCTGGGAATCCTTTTTCTCCCAGGGAACCTCCAGAGCCCCGGGTATCCACGGAACACACCAATAACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
||
| CDS CAA 90 bp | GCATCTACCACAAGGCTTAGGGTGGAGGCGGTACTTGCAGGCTCCTaGCTGTTTTCTGAGGTGCTGATGTCAGGGAGTGTCCCTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASTTRLRVEAVLAGS*LFSEVLMSGSVPGD Trigger: ATCTCCAGGGACACTCCCTGACATCAGCACCTCAGAAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACCCTAAGCCTTGTGGTAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CAA 72 bp | ACAAGGCTTAGGGTGGAGGCGGTACTTGCAGGCTCCTaGCTGTTTTCTGAGGTGCTGATGTCAGGGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TRLRVEAVLAGS*LFSEVLMSGSV Trigger: GACACTCCCTGACATCAGCACCTCAGAAAACAGCAAGGAGCCTGCAAGTACCGCCTCCACCCTAAGCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS TCA 72 bp | AACAGGTCACGCAGGCTGTGCACTTCCCGTCTTCATTaGCGTAGTAGTCAGGTGCACACTGCTTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NRSRRLCTSRLH*RSSQVHTASCS Trigger: ACTGCAGGAAGCAGTGTGCACCTGACTACTACGTCAATGAAGACGGGAAGTGCACAGCCTGCGTGACCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS GCA 72 bp | TCCCGAGGAAGGCAGCTCACAGATAGTGTCCTTCTTTaGTGTGCCTGGAGACTTGACAACCTCCTCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRGRQLTDSVLL*CAWRLDNLLSR Trigger: TCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAGCAAAGAAGGACACTATCTGTGAGCTGCCTTCCTCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | AGTAGCATCTTCCTGCACAAGGTTGGTGACACGCATTaGCAGCAAGCTCCTTGCACTGTCATTGGCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSIFLHKVGDTH*QQAPCTVIGWG Trigger: TCCCCAGCCAATGACAGTGCAAGGAGCTTGCTGCCAATGCGTGTCACCAACCTTGTGCAGGAAGATGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CCA 72 bp | CTGCATTACCTGGATCTGGACTGGGCTCCCTTGCCTTaGACGAGGAAGATTCTGGAACCTTCACCAACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHYLDLDWAPLP*TRKILEPSPTQ Trigger: CTGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CAA 72 bp | CTAGTAAGTGTCTTGCGGTCACCCGGATTGGAGCAATaGGGACCAGATCCCGAGGAAGGCAGCTCACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LVSVLRSPGLEQ*GPDPEEGSSQI Trigger: TATCTGTGAGCTGCCTTCCTCGGGATCTGGTCCCAATTGCTCCAATCCGGGTGACCGCAAGACACTTACTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS GCA 72 bp | CTTCTCTGCATTACCTGGATCTGGACTGGGCTCCCTTaGCTTGGACGAGGAAGATTCTGGAACCTTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLCITWIWTGLP*LGRGRFWNLHQ Trigger: TTGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
||
| CDS CAA 72 bp | TCTGCATTACCTGGATCTGGACTGGGCTCCCTTGCCTaGGACGAGGAAGATTCTGGAACCTTCACCAACTCA | + |
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Preference number: 6 (lower is better) Translates to: SALPGSGLGSLA*DEEDSGTFTNS Trigger: TGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CAA 72 bp | TCTTCTCTGCATTACCTGGATCTGGACTGGGCTCCCTaGCCTTGGACGAGGAAGATTCTGGAACCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SSLHYLDLDWAP*PWTRKILEPSP Trigger: TGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS GCA 72 bp | GATTCTGGAACCTTCACCAACTCAGTAGCATCTTCCTaGACAAGGTTGGTGACACGCATTGGCAGCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: DSGTFTNSVASS*TRLVTRIGSKL Trigger: GAGCTTGCTGCCAATGCGTGTCACCAACCTTGTGCAGGAAGATGCTACTGAGTTGGTGAAGGTTCCAGAATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | CTCCAAGGTCATATTCTTCTCTGCATTACCTGGATCTaGACTGGGCTCCCTTGCCTTGGACGAGGAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: LQGHILLCITWI*TGLPCLGRGRF Trigger: GAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATATGACCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | AGGTCATATTCTTCTCTGCATTACCTGGATCTGGACTaGGCTCCCTTGCCTTGGACGAGGAAGATTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSYSSLHYLDLD*APLPWTRKILE Trigger: TTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATATGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CCA 72 bp | TGTAGATTTTCTCAATCCTGTTATTGGTGTGTTCCGTaGATACCCGGGGCTCTGGAGGTTCCCTGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: CRFSQSCYWCVP*IPGALEVPWEK Trigger: TTTCTCCCAGGGAACCTCCAGAGCCCCGGGTATCCACGGAACACACCAATAACAGGATTGAGAAAATCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030339.13 |
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| CDS CAA 72 bp | TCACAGATAGTGTCCTTCTTTGCTGTGCCTGGAGACTaGACAACCTCCTCTCCAGAACAGTGGAGTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQIVSFFAVPGD*TTSSPEQWSLQ Trigger: CTGCAAACTCCACTGTTCTGGAGAGGAGGTTGTCAAGTCTCCAGGCACAGCAAAGAAGGACACTATCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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| CDS CAA 90 bp | ATATTCTTCTCTGCATTACCTGGATCTGGACTGGGCTCCCTTGCCTaGGACGAGGAAGATTCTGGAACCTTCACCAACTCAGTAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: IFFSALPGSGLGSLA*DEEDSGTFTNSVAS Trigger: AGATGCTACTGAGTTGGTGAAGGTTCCAGAATCTTCCTCGTCCAAGGCAAGGGAGCCCAGTCCAGATCCAGGTAATGCAGAGAAGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030339.13 ENSMUST00000123027.2 |
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