Pregenerated sensors for TNFRSF26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045362Ensembl transcript IDs: ENSMUST00000055723.9, ENSMUST00000208124.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCAGGTAGATTCCTGAGTTTGAGGCCAGACCGGTCTACAGAGTaGGTTCCAGGACATCTGGGGCTACACCAAGAAAACAAACCAACC | + |
|
Preference number: 1 (lower is better) Translates to: EAGRFLSLRPDRSTE*VPGHLGLHQENKPT Trigger: GGTTGGTTTGTTTTCTTGGTGTAGCCCCAGATGTCCTGGAACTCACTCTGTAGACCGGTCTGGCCTCAAACTCAGGAATCTACCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 90 bp | GCAAAGTCCACAGTTGCTCAGGCTGGCCTGCCAGGGGCTTTGTTATaGGTTTTTATGGATAACAAAGCACCTTGTCTGGGCCACATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: AKSTVAQAGLPGALL*VFMDNKAPCLGHIL Trigger: CAGGATGTGGCCCAGACAAGGTGCTTTGTTATCCATAAAAACCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTGGACTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 90 bp | CTGGGTGGAAAACAGGTCTACTTCTCTGTGAGCACAAGAACCTTGTaGCCTCTACAGCATGTTAGTTCTGACCCAGAGGGAGGCAAGACA | + |
|
Preference number: 1 (lower is better) Translates to: LGGKQVYFSVSTRTL*PLQHVSSDPEGGKT Trigger: TGTCTTGCCTCCCTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGAGAAGTAGACCTGTTTTCCACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 90 bp | CTTCAAGGAGAGAAGCCCTCTGGCTGCATACAGAGAGAAACCCTCTaGTCTTCACAAGAGAGAAGGGCACATCATATATCTGGGGGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: LQGEKPSGCIQRETL*SSQERRAHHISGGP Trigger: TGGACCCCCAGATATATGATGTGCCCTTCTCTCTTGTGAAGACCAGAGGGTTTCTCTCTGTATGCAGCCAGAGGGCTTCTCTCCTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 90 bp | TCCCAGTGTCTGATGTGGCAAAGTCCACAGTTGCTCAGGCTGGCCTaGCAGGGGCTTTGTTATGGGTTTTTATGGATAACAAAGCACCTT | + |
|
Preference number: 1 (lower is better) Translates to: SQCLMWQSPQLLRLA*QGLCYGFLWITKHL Trigger: AAGGTGCTTTGTTATCCATAAAAACCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTGGACTTTGCCACATCAGACACTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 90 bp | CCTGATGTGGGCTCAAAGGACAACATTTTTGGGTCCTCCCATCCTTaGCTTCTAGGAAAACATACTGAGCACCATGAACCCAAACTGACT | + |
|
Preference number: 1 (lower is better) Translates to: PDVGSKDNIFGSSHP*LLGKHTEHHEPKLT Trigger: AGTCAGTTTGGGTTCATGGTGCTCAGTATGTTTTCCTAGAAGGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTTGAGCCCACATCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 90 bp | GTTTTTATGGATAACAAAGCACCTTGTCTGGGCCACATCCTGATGTaGGCTCAAAGGACAACATTTTTGGGTCCTCCCATCCTTGCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: VFMDNKAPCLGHILM*AQRTTFLGPPILAF Trigger: GAAGGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTTGAGCCCACATCAGGATGTGGCCCAGACAAGGTGCTTTGTTATCCATAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 90 bp | ACAGAACACCAGGATGTTAACTATATCCATTCCCAGACATCTGGGTaGAAAACAGGTCTACTTCTCTGTGAGCACAAGAACCTTGTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: TEHQDVNYIHSQTSG*KTGLLLCEHKNLVP Trigger: GGGCACAAGGTTCTTGTGCTCACAGAGAAGTAGACCTGTTTTCCACCCAGATGTCTGGGAATGGATATAGTTAACATCCTGGTGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 90 bp | CATTCCTGCAAGGTCAGTCTCCAGTTTAGAAACAATAGTGTTCATTaGTTCCTCGACTTCCTTAAATCCAGTGATCTTCAGGAATGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: HSCKVSLQFRNNSVH*FLDFLKSSDLQECH Trigger: ATGGCATTCCTGAAGATCACTGGATTTAAGGAAGTCGAGGAAGCAATGAACACTATTGTTTCTAAACTGGAGACTGACCTTGCAGGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 90 bp | AAACGTTACAGCACAGTGATAATCTCAGCTCTGGCTTCAGATATATaGCAGCATTCACAGTACTTGGACTGGTGGAGAATAGTTTTATCA | + |
|
Preference number: 1 (lower is better) Translates to: KRYSTVIISALASDI*QHSQYLDWWRIVLS Trigger: TGATAAAACTATTCTCCACCAGTCCAAGTACTGTGAATGCTGTCATATATCTGAAGCCAGAGCTGAGATTATCACTGTGCTGTAACGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 90 bp | CATCACATAATACAAAGAAAAAGGAAATGGTCAAAGCACATACTGTaGTATTGTACAACTTTGAGCAGAAGCACCACCTTGGTAGCATTA | + |
|
Preference number: 1 (lower is better) Translates to: HHIIQRKRKWSKHIL*YCTTLSRSTTLVAL Trigger: TAATGCTACCAAGGTGGTGCTTCTGCTCAAAGTTGTACAATATCACAGTATGTGCTTTGACCATTTCCTTTTTCTTTGTATTATGTGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGAGCACAAGAACCTTGTGCCCTCTACAGCATGTTAGTTCTGACCCAGAGTTGCTCAGGCTGGCCTaGCAGGGGCTTTGTTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SVSTRTLCPLQHVSSDPELLRLA*QGLCYG Trigger: CCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAA...CTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAACAGTATTCAAGAAAAGGGCCTATTGGCAGGCAAAAGGCCTATGGAGGAACACAGTTGCTCAGGCTaGCCTGCCAGGGGCTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SNSIQEKGLLAGKRPMEEHSCSG*PARGFV Trigger: AACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTG...TTCCTCCATAGGCCTTTTGCCTGCCAATAGGCCCTTTTCTTGAATACTGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 90 bp | AAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTaGCTCAGGCTGGCCTGCCAGGGGCTTTGTTATGGGTTTTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: KHRHYSQCLMWQSPQ*LRLACQGLCYGFLW Trigger: CCATAAAAACCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 90 bp | GCTTCTGAGAAATTCCCATTCACACCTCCATCTGCTCACTGTGGGTaGAGAGGACTAAAGACTAAGGCTAGTTCTGAGATGCCTGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASEKFPFTPPSAHCG*RGLKTKASSEMPGG Trigger: TCCCCCAGGCATCTCAGAACTAGCCTTAGTCTTTAGTCCTCTCAACCCACAGTGAGCAGATGGAGGTGTGAATGGGAATTTCTCAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAAGAGAGAAGGGCACATCATATATCTGGGGGTCCACGGGGTATGCAGTGAGTGATCTTCAGGAATaGCATCTGCTTACTTTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: FTREKGTSYIWGSTGYAVSDLQE*HLLTFR Trigger: CCGGAAAGTAAGCAGATGGCATTCCTGAAGATCACT...CACTGCATACCCCGTGGACCCCCAGATATATGATGTGCCCTTCTCTCTTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 90 bp | TGCCCTCTACAGCATGTTAGTTCTGACCCAGAGGGAGGCAAGACATaGCTTAGGTTGGAACAGCCTAAGCTATGCCTCTCTACATCATTA | + |
|
Preference number: 2 (lower is better) Translates to: CPLQHVSSDPEGGKT*LRLEQPKLCLSTSL Trigger: TAATGATGTAGAGAGGCATAGCTTAGGCTGTTCCAACCTAAGCAATGTCTTGCCTCCCTCTGGGTCAGAACTAACATGCTGTAGAGGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAGGGTATGCAGTGGGATaGATGTCAGCTCCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQGYAVG*MSAPNS Trigger: TGAATTTGGAGCTGACATTCATCCCACTGCATACCC...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCAGGATGTTTGGGGATCTCTGCAAACACCAAGGCTGGCAGCCTAATGATCTGTAGACATAGCTTCTaGGAAATTCCCATTCACACC | + |
|
Preference number: 2 (lower is better) Translates to: LSGCLGISANTKAGSLMICRHSF*EIPIHT Trigger: GGTGTGAATGGGAATTTCTCAGAAGCTATGTCTACA...GATCATTAGGCTGCCAGCCTTGGTGTTTGCAGAGATCCCCAAACATCCTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAAGGGAGGCAAGACATTaGTTAGGTTGGAACAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQREARH*LGWNSL Trigger: TAGGCTGTTCCAACCTAAGCAATGTCTTGCCTCCCT...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTAGGAGAGAAGCCCTCTaGCTGCATACAGAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVRREAL*LHTERN Trigger: GTTTCTCTCTGTATGCAGCCAGAGGGCTTCTCTCCT...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAACCATTCCCAGACATCTaGGTGGAAAACAGGTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQPFPDI*VENRST Trigger: AGTAGACCTGTTTTCCACCCAGATGTCTGGGAATGG...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTATTGGCAGGCAAAAGGCCATTCACACCTCCATCTaGTCACTGTGGGTTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RFIEQQYSRKGPIGRQKAIHTSI*SLWVER Trigger: CCTCTCAACCCACAGTGAGCAGATGGAGGTGTGAAT...GGCCTTTTGCCTGCCAATAGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAAAAGGACAACATTTTTaGGTCCTCCCATCCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQKGQHF*VLPSLP Trigger: AGGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTT...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTGGCCACATCCTGATGTaGGCTCAAAGGACAACATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVGHILM*AQRTTF Trigger: AAATGTTGTCCTTTGAGCCCACATCAGGATGTGGCC...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 90 bp | GACTCTAGCTCGAGGGTGAAGCAAACACAATTTTTAGCAGCTAAGTaGCCACAGTTTGCAAATACATTCCTGCAAGGTCAGTCTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: DSSSRVKQTQFLAAK*PQFANTFLQGQSPV Trigger: AACTGGAGACTGACCTTGCAGGAATGTATTTGCAAACTGTGGCAACTTAGCTGCTAAAAATTGTGTTTGCTTCACCCTCGAGCTAGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATAGCAGGTGGATCTCTGTaGGTTCCAGGTCAGCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGINKDNSLFKCVLGLQIAGGSL*VPGQLS Trigger: GCTAAGCTGACCTGGAACTCACAGAGATCCACCTGC...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAATGATCCATTTGAGGCCAAAAGGAAATCCAGTTCAACACAACTTAGCCTATGAGAAGCCCTCTGGCTaGATACAGAGAGAAACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LMIHLRPKGNPVQHNLAYEKPSG*IQRETL Trigger: GAGGGTTTCTCTCTGTATGCAGCCAGAGGGCTTCTC...ATAGGCTAAGTTGTGTTGAACTGGATTTCCTTTTGGCCTCAAATGGATCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACAGGAGAGAAGCCCTCTaGCTGCATACAGAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: REIQDSQGYIEKSYLIKNRREAL*LHTERN Trigger: GTTTCTCTCTGTATGCAGCCAGAGGGCTTCTCTCCT...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATAATTCACACCTCCATCTaGTCACTGTGGGTTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SGINKDNSLFKCVLGLQIIHTSI*SLWVER Trigger: CCTCTCAACCCACAGTGAGCAGATGGAGGTGTGAAT...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACGGCCACATCCTGATGTaGGCTCAAAGGACAACATTT | + |
|
Preference number: 2 (lower is better) Translates to: REIQDSQGYIEKSYLIKNGHILM*AQRTTF Trigger: AAATGTTGTCCTTTGAGCCCACATCAGGATGTGGCC...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACTCCATCTGCTCACTGTaGGTTGAGAGGACTAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: REIQDSQGYIEKSYLIKNSICSL*VERTKD Trigger: GTCTTTAGTCCTCTCAACCCACAGTGAGCAGATGGA...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTGGGTATGCAGTGGGATaGATGTCAGCTCCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPGYAVG*MSAPNS Trigger: TGAATTTGGAGCTGACATTCATCCCACTGCATACCC...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTTCCCAGACATCTGGGTaGAAAACAGGTCTACTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPSQTSG*KTGLLL Trigger: GAGAAGTAGACCTGTTTTCCACCCAGATGTCTGGGA...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACTGTAGACATAGCTTCTaGGAAATTCCCATTCACACC | + |
|
Preference number: 2 (lower is better) Translates to: REIQDSQGYIEKSYLIKNCRHSF*EIPIHT Trigger: GGTGTGAATGGGAATTTCTCAGAAGCTATGTCTACA...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAATGATCCATTTGAGGCCAAAAGGAAATCCAGTTCAACACAACTTAGCCTATTTGACTCACAAACAGTaGTGGAGATACAGGTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LMIHLRPKGNPVQHNLAYLTHKQ*WRYRSK Trigger: CTTAGACCTGTATCTCCAGCACTGTTTGTGAGTCAA...ATAGGCTAAGTTGTGTTGAACTGGATTTCCTTTTGGCCTCAAATGGATCATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTTGTTATGGGTTTTTATaGATAACAAAGCACCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVCYGFL*ITKHLV Trigger: GACAAGGTGCTTTGTTATCCATAAAAACCCATAACA...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACTTCAGATGGGCTATTTaGAATGTTTCAGTCCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: REIQDSQGYIEKSYLIKNFRWAI*NVSVLY Trigger: ATACAGGACTGAAACATTCCAAATAGCCCATCTGAA...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTGAACAGCCTAAGCTATaGCTCTCTACATCATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPEQPKL*LSTSLK Trigger: TTTTAATGATGTAGAGAGGCATAGCTTAGGCTGTTC...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTTTCAGATGGGCTATTTaGAATGTTTCAGTCCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPFRWAI*NVSVLY Trigger: ATACAGGACTGAAACATTCCAAATAGCCCATCTGAA...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATATGTTATGGGTTTTTATaGATAACAAAGCACCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SGINKDNSLFKCVLGLQICYGFL*ITKHLV Trigger: GACAAGGTGCTTTGTTATCCATAAAAACCCATAACA...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GGCCAGCCAAGGCAGGCTTCAAGGAGAGAAGCCCTCTaGCTGCATACAGAGAGAAACCCTCTGGTCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GQPRQASRREAL*LHTERNPLVFT Trigger: TGTGAAGACCAGAGGGTTTCTCTCTGTATGCAGCCAGAGGGCTTCTCTCCTTGAAGCCTGCCTTGGCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | CCCAGCACTCAGGAGGTAGAGGCAGGTGGATCTCTGTaGGTTCCAGGTCAGCTTAGCCTACAAAGGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: PSTQEVEAGGSL*VPGQLSLQREI Trigger: GATCTCCCTTTGTAGGCTAAGCTGACCTGGAACTCACAGAGATCCACCTGCCTCTACCTCCTGAGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | GGAGAGCCTAAAAACACAGACACTATTCCCAGTGTCTaGTGTGGCAAAGTCCACAGTTGCTCAGGCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GEPKNTDTIPSV*CGKVHSCSGWP Trigger: AGGCCAGCCTGAGCAACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | TCTTCCGTAAAGACGGGATCTGTTAGCTTGGCATGGTaGTGCACAACTTCAATCCCAGCACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVKTGSVSLAW*CTTSIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTGAAGTTGTGCATCACCATGCCAAGCTAACAGATCCCGTCTTTACGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCAGGATGTTTGGGGATCTCTGCAAACACCAAGGCTGGCAGCCTAATGATCCAAGAAAAGGGCCTATaGGCAGGCAAAAGGCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LSGCLGISANTKAGSLMIQEKGL*AGKRPM Trigger: CATAGGCCTTTTGCCTGCCAATAGGCCCTTTTCTTG...GATCATTAGGCTGCCAGCCTTGGTGTTTGCAGAGATCCCCAAACATCCTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 72 bp | CTGATGTGGCAAAGTCCACAGTTGCTCAGGCTGGCCTaGCAGGGGCTTTGTTATGGGTTTTTATGGATAACA | + |
|
Preference number: 3 (lower is better) Translates to: LMWQSPQLLRLA*QGLCYGFLWIT Trigger: TGTTATCCATAAAAACCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTGGACTTTGCCACATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GCACATCATATATCTGGGGGTCCACGGGGTATGCAGTaGGATGAATGTCAGCTCCAAATTCAGATGGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AHHISGGPRGMQ*DECQLQIQMGY Trigger: ATAGCCCATCTGAATTTGGAGCTGACATTCATCCCACTGCATACCCCGTGGACCCCCAGATATATGATGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GATAACAAAGCACCTTGTCTGGGCCACATCCTGATGTaGGCTCAAAGGACAACATTTTTGGGTCCTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: DNKAPCLGHILM*AQRTTFLGPPI Trigger: GATGGGAGGACCCAAAAATGTTGTCCTTTGAGCCCACATCAGGATGTGGCCCAGACAAGGTGCTTTGTTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAGAGGGAGGCAAGACATaGCTTAGGTTGGAACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQEGGKT*LRLEQP Trigger: AGGCTGTTCCAACCTAAGCAATGTCTTGCCTCCCTC...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | TCATATATCTGGGGGTCCACGGGGTATGCAGTGGGATaGATGTCAGCTCCAAATTCAGATGGGCTATTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SYIWGSTGYAVG*MSAPNSDGLFG Trigger: TCCAAATAGCCCATCTGAATTTGGAGCTGACATTCATCCCACTGCATACCCCGTGGACCCCCAGATATATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 72 bp | GGCTCAAAGGACAACATTTTTGGGTCCTCCCATCCTTaGCTTCTAGGAAAACATACTGAGCACCATGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: GSKDNIFGSSHP*LLGKHTEHHEP Trigger: GGGTTCATGGTGCTCAGTATGTTTTCCTAGAAGGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 72 bp | AAACAGGTCTACTTCTCTGTGAGCACAAGAACCTTGTaGCCTCTACAGCATGTTAGTTCTGACCCAGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KQVYFSVSTRTL*PLQHVSSDPEG Trigger: TCCCTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGAGAAGTAGACCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GAGAAGCCCTCTGGCTGCATACAGAGAGAAACCCTCTaGTCTTCACAAGAGAGAAGGGCACATCATATATCT | + |
|
Preference number: 3 (lower is better) Translates to: EKPSGCIQRETL*SSQERRAHHIS Trigger: AGATATATGATGTGCCCTTCTCTCTTGTGAAGACCAGAGGGTTTCTCTCTGTATGCAGCCAGAGGGCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GTCAGGATGTTTGGGGATCTCTGCAAACACCAAGGCTaGCAGCCTAATGATCCATTTGAGGCCAAAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VRMFGDLCKHQG*QPNDPFEAKRK Trigger: TTTCCTTTTGGCCTCAAATGGATCATTAGGCTGCCAGCCTTGGTGTTTGCAGAGATCCCCAAACATCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAAGAGAGAAGGGCACATCATATATCTGGGGGTCCACGGGGTATGCAGTGCTAAGTTGCCACAGTTaGCAAATACATTCCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTREKGTSYIWGSTGYAVLSCHS*QIHSCK Trigger: CTTGCAGGAATGTATTTGCAAACTGTGGCAACTTAG...CACTGCATACCCCGTGGACCCCCAGATATATGATGTGCCCTTCTCTCTTGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTCAAAGGACAACATTTTaGGGTCCTCCCATCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVQRTTF*GPPILA Trigger: GGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTTG...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAAAGACATTGCTTAGGTaGGAACAGCCTAAGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQKTLLR*EQPKLC Trigger: GCATAGCTTAGGCTGTTCCAACCTAAGCAATGTCTT...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 72 bp | TGGTTTAAATCTGTTGTCAGGATGTTTGGGGATCTCTaGAAACACCAAGGCTGGCAGCCTAATGATCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: WFKSVVRMFGDL*KHQGWQPNDPF Trigger: AAATGGATCATTAGGCTGCCAGCCTTGGTGTTTGCAGAGATCCCCAAACATCCTGACAACAGATTTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | CAGGATGTTAACTATATCCATTCCCAGACATCTGGGTaGAAAACAGGTCTACTTCTCTGTGAGCACAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QDVNYIHSQTSG*KTGLLLCEHKN Trigger: GTTCTTGTGCTCACAGAGAAGTAGACCTGTTTTCCACCCAGATGTCTGGGAATGGATATAGTTAACATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACGGCCTGCCAGGGGCTTaGTTATGGGTTTTTATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: REIQDSQGYIEKSYLIKNGLPGA*LWVFMD Trigger: ATCCATAAAAACCCATAACAAAGCCCCTGGCAGGCC...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | AGCACAGTGATAATCTCAGCTCTGGCTTCAGATATATaGCAGCATTCACAGTACTTGGACTGGTGGAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: STVIISALASDI*QHSQYLDWWRI Trigger: TATTCTCCACCAGTCCAAGTACTGTGAATGCTGTCATATATCTGAAGCCAGAGCTGAGATTATCACTGTGCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | GTATGCAGTGGGATGAATGTCAGCTCCAAATTCAGATaGGCTATTTGGAATGTTTCAGTCCTGTATCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCSGMNVSSKFR*AIWNVSVLYQR Trigger: CCTTTGATACAGGACTGAAACATTCCAAATAGCCCATCTGAATTTGGAGCTGACATTCATCCCACTGCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTATTGGCAGGCAAAAGGCCCTAAGTTGCCACAGTTaGCAAATACATTCCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RFIEQQYSRKGPIGRQKALSCHS*QIHSCK Trigger: CTTGCAGGAATGTATTTGCAAACTGTGGCAACTTAG...GGCCTTTTGCCTGCCAATAGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTCAAAGGACAACATTTTaGGGTCCTCCCATCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPQRTTF*GPPILA Trigger: GGCAAGGATGGGAGGACCCAAAAATGTTGTCCTTTG...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTGGCCTGCCAGGGGCTTaGTTATGGGTTTTTATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPGLPGA*LWVFMD Trigger: ATCCATAAAAACCCATAACAAAGCCCCTGGCAGGCC...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR TCA 72 bp | CAAAACAAGATAAGTTTGGCAGAGGTAGAGGTCTATTaGCTCACAAACAGTGCTGGAGATACAGGTCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QNKISLAEVEVY*LTNSAGDTGLR Trigger: TCTTAGACCTGTATCTCCAGCACTGTTTGTGAGTCAATAGACCTCTACCTCTGCCAAACTTATCTTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTTTTTTAGCAGCTAAGTaGCCACAGTTTGCAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVFLAAK*PQFANT Trigger: TGTATTTGCAAACTGTGGCAACTTAGCTGCTAAAAA...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAATGATCCATTTGAGGCCAAAAGGAAATCCAGTTCAACACAACTTAGCCTATTCCGGGGGAAGTTTTTaGATGATAATTAACTCGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LMIHLRPKGNPVQHNLAYSGGSF*MIINSV Trigger: GACCGAGTTAATTATCATCAAAAAACTTCCCCCGGA...ATAGGCTAAGTTGTGTTGAACTGGATTTCCTTTTGGCCTCAAATGGATCATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR GCA 72 bp | AAGGTCAGTCTCCAGTTTAGAAACAATAGTGTTCATTaGTTCCTCGACTTCCTTAAATCCAGTGATCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVSLQFRNNSVH*FLDFLKSSDLQ Trigger: CTGAAGATCACTGGATTTAAGGAAGTCGAGGAAGCAATGAACACTATTGTTTCTAAACTGGAGACTGACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACATTCAGATGGGCTATTaGGAATGTTTCAGTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: REIQDSQGYIEKSYLIKNIQMGY*ECFSPV Trigger: TACAGGACTGAAACATTCCAAATAGCCCATCTGAAT...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CCA 72 bp | TTAGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTaGTTTAAATCTGTTGTCAGGATGTTTGGGGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVWFGLVWFGLV*FKSVVRMFGDL Trigger: GAGATCCCCAAACATCCTGACAACAGATTTAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAATGATCCATTTGAGGCCAAAAGGAAATCCAGTTCAACACAACTTAGCCTATTTTTTAGCAGCTAAGTaGCCACAGTTTGCAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: LMIHLRPKGNPVQHNLAYFLAAK*PQFANT Trigger: TGTATTTGCAAACTGTGGCAACTTAGCTGCTAAAAA...ATAGGCTAAGTTGTGTTGAACTGGATTTCCTTTTGGCCTCAAATGGATCATTAG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | CACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTaGCTCAGGCTGGCCTGCCAGGGGCTTTGTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYSQCLMWQSPQ*LRLACQGLCYG Trigger: CCCATAACAAAGCCCCTGGCAGGCCAGCCTGAGCAACTGTGGACTTTGCCACATCAGACACTGGGAATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTAAAAACACAGACACTATTCCCAGTGTCTGATGTGGCAAAGTCCACAGTTCGTCAGGGCAGCTGCTaGATGTGTGGCACCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKTQTLFPVSDVAKSTVRQGSC*MCGTSP Trigger: TGGAGAGGTGCCACACATGCAGCAGCTGCCCTGACG...AACTGTGGACTTTGCCACATCAGACACTGGGAATAGTGTCTGTGTTTTTAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTATTTGGAATGTTTCAGTCCTGTATCAAAGGACACTTGACTCTAGCTCGTGGCATTGCATTTCCTaGCGACTCTGCCGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WAIWNVSVLYQRTLDSSSWHCIS*RLCRQG Trigger: GCCCTGACGGCAGAGTCGTCAGGAAATGCAATGCCA...CGAGCTAGAGTCAAGTGTCCTTTGATACAGGACTGAAACATTCCAAATAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAGCACAAGAACCTTGTGCCCTCTACAGCATGTTAGTTCTGACCCAGAGGATTCCGGAGGTAAGTaGCAGCAGAACATTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSTRTLCPLQHVSSDPEDSGGK*QQNIVG Trigger: GCCTACAATGTTCTGCTGGCACTTACCTCCGGAATC...CTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| 3UTR CAA 72 bp | CAGCATGTTAGTTCTGACCCAGAGGGAGGCAAGACATaGCTTAGGTTGGAACAGCCTAAGCTATGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHVSSDPEGGKT*LRLEQPKLCLS Trigger: AGAGAGGCATAGCTTAGGCTGTTCCAACCTAAGCAATGTCTTGCCTCCCTCTGGGTCAGAACTAACATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR TCA 90 bp | CCTATTGGCAGGCAAAAGGCCTATGGAGGAAGAGTCTGGGATAAACAAAGACAAGAGAAGCAGAAACATTaGGAGCCTGACTGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIGRQKAYGGRVWDKQRQEKQKH*EPDCPG Trigger: GCCAGGACAGTCAGGCTCTCAATGTTTCTGCTTCTC...TTGTCTTTGTTTATCCCAGACTCTTCCTCCATAGGCCTTTTGCCTGCCAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGCACAAGAACCTTGTGCCCTCTACAGCATGTTAGTTCTGACCCAGAGCTGTACGGGAACATTTaGCCACTTCTTCTTGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSTRTLCPLQHVSSDPELYGNI*PLLLGR Trigger: ACGACCAAGAAGAAGTGGCCAAATGTTCCCGTACAG...CTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| 3UTR CAA 72 bp | GGAAAACAGGTCTACTTCTCTGTGAGCACAAGAACCTaGTGCCCTCTACAGCATGTTAGTTCTGACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKQVYFSVSTRT*CPLQHVSSDPE Trigger: CTCTGGGTCAGAACTAACATGCTGTAGAGGGCACAAGGTTCTTGTGCTCACAGAGAAGTAGACCTGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACTGCCGTCAGGGCAGCTaGTGCATGTGTGGCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REIQDSQGYIEKSYLIKNCRQGS*CMCGTS Trigger: AGAGGTGCCACACATGCAGCAGCTGCCCTGACGGCA...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATGAATGTCAGCTCCAAATTCAGATGGGCTATTTGGAATGTTTCAGTCCTCAGCTGCTGCATGTGTaGCACCTCTCCAAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WDECQLQIQMGYLECFSPQLLHV*HLSKQF Trigger: AAACTGTTTGGAGAGGTGCCACACATGCAGCAGCTG...AGGACTGAAACATTCCAAATAGCCCATCTGAATTTGGAGCTGACATTCATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| 3UTR CAA 72 bp | AAATTCCCATTCACACCTCCATCTGCTCACTGTGGGTaGAGAGGACTAAAGACTAAGGCTAGTTCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KFPFTPPSAHCG*RGLKTKASSEM Trigger: CATCTCAGAACTAGCCTTAGTCTTTAGTCCTCTCAACCCACAGTGAGCAGATGGAGGTGTGAATGGGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | TTGGTTTGGTTTGGTTTAAATCTGTTGTCAGGATGTTaGGGGATCTCTGCAAACACCAAGGCTGGCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVWFGLNLLSGC*GISANTKAGSL Trigger: TAGGCTGCCAGCCTTGGTGTTTGCAGAGATCCCCAAACATCCTGACAACAGATTTAAACCAAACCAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | TCTGCAAACACCAAGGCTGGCAGCCTAATGATCCATTaGAGGCCAAAAGGAAATCCAGTTCAACACAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SANTKAGSLMIH*RPKGNPVQHNL Trigger: TAAGTTGTGTTGAACTGGATTTCCTTTTGGCCTCAAATGGATCATTAGGCTGCCAGCCTTGGTGTTTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTCCTATAAGGATGAGATTTATTGAGCAACAGTATTCAAGAAAAGGGCCTGAGAAGCAGAAACATTaGGAGCCTGACTGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPIRMRFIEQQYSRKGPEKQKH*EPDCPG Trigger: GCCAGGACAGTCAGGCTCTCAATGTTTCTGCTTCTC...AGGCCCTTTTCTTGAATACTGTTGCTCAATAAATCTCATCCTTATAGGAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | TCGAGGGTGAAGCAAACACAATTTTTAGCAGCTAAGTaGCCACAGTTTGCAAATACATTCCTGCAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVKQTQFLAAK*PQFANTFLQGQ Trigger: CTGACCTTGCAGGAATGTATTTGCAAACTGTGGCAACTTAGCTGCTAAAAATTGTGTTTGCTTCACCCTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTATTTGGAATGTTTCAGTCCTGTATCAAAGGACACTTGACTCTAGCTCGCATTCACTCTTATTATaGTTCTCCTGGCATGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: WAIWNVSVLYQRTLDSSSHSLLL*FSWHGF Trigger: GAATCCATGCCAGGAGAACCATAATAAGAGTGAATG...CGAGCTAGAGTCAAGTGTCCTTTGATACAGGACTGAAACATTCCAAATAGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS-3UTR CCA 90 bp | CGGGGTATGCAGTGGGATGAATGTCAGCTCCAAATTCAGATGGGCTATTTGGAAGATTCTCTGTTTTTGTaGTCTATGAAGTGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGMQWDECQLQIQMGYLEDSLFL*SMKCSE Trigger: TTCTGAACACTTCATAGACCACAAAAACAGAGAATC...TTCCAAATAGCCCATCTGAATTTGGAGCTGACATTCATCCCACTGCATACCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| 3UTR CAA 72 bp | GTTTGGTTTGGTTTGGTTTGGTTTGGTTTAAATCTGTaGTCAGGATGTTTGGGGATCTCTGCAAACACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWFGLVWFGLNL*SGCLGISANTK Trigger: CTTGGTGTTTGCAGAGATCCCCAAACATCCTGACAACAGATTTAAACCAAACCAAACCAAACCAAACCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | AAGAAAAAGGAAATGGTCAAAGCACATACTGTGATATaGTACAACTTTGAGCAGAAGCACCACCTTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKKEMVKAHTVI*YNFEQKHHLGS Trigger: GCTACCAAGGTGGTGCTTCTGCTCAAAGTTGTACAATATCACAGTATGTGCTTTGACCATTTCCTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| 3UTR CAA 72 bp | TGTTGGTTAGTTTGGTTTGGTTTGGTTTGGTTTGGTTaGGTTTGGTTTAAATCTGTTGTCAGGATGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CWLVWFGLVWFG*VWFKSVVRMFG Trigger: CCCAAACATCCTGACAACAGATTTAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACTAACCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATAATAGTGGAGGAGAGCTaGATATTCTCTCCTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGINKDNSLFKCVLGLQIIVEES*IFSPLL Trigger: TAAAAGAGGAGAGAATATTCAGCTCTCCTCCACTAT...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATATGTTTTTGTGGTCTATaGAGTGTTCAGAATCACATG | + |
|
Preference number: 4 (lower is better) Translates to: SGINKDNSLFKCVLGLQICFCGL*SVQNHM Trigger: CATGTGATTCTGAACACTTCATAGACCACAAAAACA...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS GCA 90 bp | TGCATGTGTGGCACCTCTCCAAACAGTTTTCAGAGTCACAGTAGGTaGCCTGCTTACACTGGCACACACGATCAGCTGTACGGGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: CMCGTSPNSFQSHSR*PAYTGTHDQLYGNI Trigger: AATGTTCCCGTACAGCTGATCGTGTGTGCCAGTGTAAGCAGGGCACCTACTGTGACTCTGAAAACTGTTTGGAGAGGTGCCACACATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS TCA 90 bp | GCTATGATAACCACAATACCCAGAGGCTTAGAGAAGCAGAAACATTaGGAGCCTGACTGTCCTGGCTCTGAGTCAAACTTGTCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: AMITTIPRGLEKQKH*EPDCPGSESNLSHT Trigger: TGTGTGTGACAAGTTTGACTCAGAGCCAGGACAGTCAGGCTCTCAATGTTTCTGCTTCTCTAAGCCTCTGGGTATTGTGGTTATCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055723.9 ENSMUST00000208124.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGATCCAGGATAGCCAAGGCTACATAGAGAAATCCTATCTTATTAAAAACGCTGTACGGGAACATTaGGCCACTTCTTCTTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: REIQDSQGYIEKSYLIKNAVREH*ATSSWS Trigger: CGACCAAGAAGAAGTGGCCAAATGTTCCCGTACAGC...GTTTTTAATAAGATAGGATTTCTCTATGTAGCCTTGGCTATCCTGGATCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATAAACAAAGACAATAGTCTGTTCAAGTGTGTGCTAGGTCTACAAATACAGAGGTTCTCATGTTaGAACTCACCAATCTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SGINKDNSLFKCVLGLQIQRFSC*NSPILH Trigger: GTGTAAGATTGGTGAGTTCAAACATGAGAACCTCTG...TATTTGTAGACCTAGCACACACTTGAACAGACTATTGTCTTTGTTTATCCCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS GCA 72 bp | GGCACCTCTCCAAACAGTTTTCAGAGTCACAGTAGGTaGCCTGCTTACACTGGCACACACGATCAGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GTSPNSFQSHSR*PAYTGTHDQLY Trigger: GTACAGCTGATCGTGTGTGCCAGTGTAAGCAGGGCACCTACTGTGACTCTGAAAACTGTTTGGAGAGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS CAA 72 bp | GAGTCAAACTTGTCACACACAGTGTCCATTGTGGCATaGCATTTCCTGACGACTCTGCCGTCAGGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESNLSHTVSIVA*HFLTTLPSGQL Trigger: CAGCTGCCCTGACGGCAGAGTCGTCAGGAAATGCAATGCCACAATGGACACTGTGTGTGACAAGTTTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS CAA 90 bp | TCGTCCCGGCACACAGAGCAGGGAAAGCATTCAGATTCTCTGTTTTaGTGGTCTATGAAGTGTTCAGAATCACATGGAGCACATTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRHTEQGKHSDSLF*WSMKCSESHGAHSL Trigger: GAGTGAATGTGCTCCATGTGATTCTGAACACTTCATAGACCACAAAAACAGAGAATCTGAATGCTTTCCCTGCTCTGTGTGCCGGGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS CAA 72 bp | CCAGCAGAACATTGTAGGCAGCAGAGGTTCTCATGTTaGAACTCACCAATCTTACACAGGGTTATAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PAEHCRQQRFSC*NSPILHRVIVF Trigger: AAACACTATAACCCTGTGTAAGATTGGTGAGTTCAAACATGAGAACCTCTGCTGCCTACAATGTTCTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||
| CDS CCA 72 bp | TCTGTTTTTGTGGTCTATGAAGTGTTCAGAATCACATaGAGCACATTCACTCTTATTATGGTTCTCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVFVVYEVFRIT*STFTLIMVLLA Trigger: TGCCAGGAGAACCATAATAAGAGTGAATGTGCTCCATGTGATTCTGAACACTTCATAGACCACAAAAACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055723.9 |
||