Pregenerated sensors for TNFRSF25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024793Ensembl transcript IDs: ENSMUST00000025706.10, ENSMUST00000035275.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTaGCATAAAATGTCTACACGCATAAGTAACAATACT | + |
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Preference number: 3 (lower is better) Translates to: PCYAGPRQGVSN*HKMSTRISNNT Trigger: AGTATTGTTACTTATGCGTGTAGACATTTTATGTCAATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| 3UTR TCA 72 bp | TTTAATACCAAGTCCAAACTCGGGCTAATTAACAGCTaGGCAACCAATCACTTGGCCCCTTCTGGTATTTCT | + |
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Preference number: 3 (lower is better) Translates to: FNTKSKLGLINS*ATNHLAPSGIS Trigger: AGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAATTAGCCCGAGTTTGGACTTGGTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGCACGCTGCAGGCGGCTaGGCAGGTCCTCGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRHAAGG*AGPRHS Trigger: GCTGTGCCGAGGACCTGCGCAGCCGCCTGCAGCGTG...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGCTGCCCCAGGAGGTaGCCTCTCCCTCCTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRGCPRR*PLPPRQ Trigger: CTGCCTAGGAGGGAGAGGTCACCTCCTGGGGCAGCC...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACCACGCTGCAGGCGGCTaGGCAGGTCCTCGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHHAAGG*AGPRHS Trigger: GCTGTGCCGAGGACCTGCGCAGCCGCCTGCAGCGTG...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGCCAGACATGCCGCCCTaGCCCTGGCCACCAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRPDMPP*PWPPSS Trigger: GCTGCTTGGTGGCCAGGGCCAGGGCGGCATGTCTGG...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGCTGCGGGCCAGGCTaGAGCACAGCAGCCGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGSCGPG*STAAGE Trigger: CTCTCCGGCTGCTGTGCTCCAGCCTGGCCCGCAGCT...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGCCTGCAGGCTGCTGCTaGCGCCAGCGCTTGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRPAGCC*RQRLSI Trigger: GATGCTCAAGCGCTGGCGTCAGCAGCAGCCTGCAGG...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCGATGGCACCGAGGCCTaGAGGCTGCTGCTGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGDGTEA*RLLLTP Trigger: TGGCGTCAGCAGCAGCCTGCAGGCCTCGGTGCCATC...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACAGCTGCGGGCCAGGCTaGAGCACAGCAGCCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHSCGPG*STAAGE Trigger: CTCTCCGGCTGCTGTGCTCCAGCCTGGCCCGCAGCT...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCCCGCAGACCACCTCCTaGGTCTGGGATAAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGPQTTS*VWDKPG Trigger: CCCTGGCTTATCCCAGACTCAGGAGGTGGTCTGCGG...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTCACACCTGCCAGACATaGCGCCCTGGCCCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIHTCQT*RPGPGH Trigger: GTGGCCAGGGCCAGGGCGGCATGTCTGGCAGGTGTG...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTATGCCGCCCTGGCCCTaGCCACCAAGCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIMPPWP*PPSSSS Trigger: GCTGCTGCTGCTTGGTGGCCAGGGCCAGGGCGGCAT...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGCAGTTGACCCTGGTGTaGCTGCCCCAGGAGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRQLTLV*LPQEVT Trigger: GGTCACCTCCTGGGGCAGCCACACCAGGGTCAACTG...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTCCTGCAGGCTGCTGCTaGCGCCAGCGCTTGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIPAGCC*RQRLSI Trigger: GATGCTCAAGCGCTGGCGTCAGCAGCAGCCTGCAGG...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCGGGGTTGGAGCCTCATaGACTGGTGTTGTAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGGVGAS*TGVVAP Trigger: CGGGGCTACAACACCAGTCCATGAGGCTCCAACCCC...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGTCAACACACCAGCCTaGCTGGCAGCCACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHVNTPA*LAATVG Trigger: ACCCACTGTGGCTGCCAGTCAGGCTGGTGTGTTGAC...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACAGTACTGCTTGGAGGTaGCAGGAGGGTGTGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHSTAWR*QEGVGA Trigger: AGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACT...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGGGTTGGAGCCTCATaGACTGGTGTTGTAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHGVGAS*TGVVAP Trigger: CGGGGCTACAACACCAGTCCATGAGGCTCCAACCCC...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCTCTGAGGCTGAGAGATaGGCAGTCTGTGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGSEAER*AVCGEA Trigger: GGCCTCACCACAGACTGCCCATCTCTCAGCCTCAGA...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTGTCAACACACCAGCCTaGCTGGCAGCCACAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIVNTPA*LAATVG Trigger: ACCCACTGTGGCTGCCAGTCAGGCTGGTGTGTTGAC...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACCAGCTGTGTCTGCAGTaGCCACGGCCTTACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHQLCLQ*PRPYKA Trigger: AGCCTTGTAAGGCCGTGGTCACTGCAGACACAGCTG...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCCACACCTGCCAGACATaGCGCCCTGGCCCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASHTCQT*RPGPGH Trigger: GTGGCCAGGGCCAGGGCGGCATGTCTGGCAGGTGTG...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGTTGCCACAGGGTTCTaGGCAGGGGGCCTTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHVATGF*AGGLHV Trigger: TACATGAAGGCCCCCTGCGCAGAACCCTGTGGCAAC...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTGAAGGCAGGTGGAGTTaGCACAGGGTTCTGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIEGRWS*HRVLRR Trigger: CCTGCGCAGAACCCTGTGGCAACTCCACCTGCCTTC...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACCGTCCCAGCTGTGTCTaGAGTGACCACGGCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHRPSCV*SDHGLT Trigger: TGTAAGGCCGTGGTCACTGCAGACACAGCTGGGACG...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTAGTACTGCTTGGAGGTaGCAGGAGGGTGTGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVISTAWR*QEGVGA Trigger: AGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACT...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCCCCGCAGCCCCAGCGTaGGCACGAACTCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASPAAPA*ARTPST Trigger: GGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGG...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACAGCCTTCCAGACCCATaGGCTCCAGAGCCGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHSLPDP*APEPHR Trigger: TCTATGCGGCTCTGGAGCGCATGGGTCTGGAAGGCT...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGTGGGTGTCCGACTTTaGCGAGCAGTTCTCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHVGVRL*RAVLKG Trigger: ACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCAC...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACCAGGGGTCCAGTTGTTaGCTACCAACTGGACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHQGSSC*LPTGQW Trigger: CCACTGTCCAGTTGGTAGGCAACAACTGGACCCCTG...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCGATGGCACCGAGGCCTaGAGGCTGCTGCTGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASDGTEA*RLLLTP Trigger: TGGCGTCAGCAGCAGCCTGCAGGCCTCGGTGCCATC...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCTTCTCAAGGGTCACTTaGAGGGCCTCTTCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGFSRVT*RASSSQ Trigger: CTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAA...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | AAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGGGGTTAGTAATTCAGGGGTCCAGTTGTTaGCTACCAACTGGACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KSEAASPATQDHGRGLVIQGSSC*LPTGQW Trigger: CCACTGTCCAGTTGGTAGGCAACAACTGGACCCCTG...AATTACTAACCCCCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTCCCGCAGCCCCAGCGTaGGCACGAACTCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAPAAPA*ARTPST Trigger: GGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGG...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACTTGAGCATCTCATACTaGTGGTCTCGGAAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVLQISKSEAASPATQDHLSISY*WSRKRQ Trigger: CTGCCGCTTCCGAGACCAGCAGTATGAGATGCTCAA...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCTCCAAGAGTTCTGTTTaGCAGCTGATCCCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VLQISKSEAASPATQDHGSKSSV*QLIPGL Trigger: CAACCCTGGGATCAGCTGCCAAACAGAACTCTTGGA...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGTCCAAGAGTTCTGTTTaGCAGCTGATCCCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRSKSSV*QLIPGL Trigger: CAACCCTGGGATCAGCTGCCAAACAGAACTCTTGGA...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCAGGAGCATCTCATACTGCTaGTCTCGGAAGCGGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: LQISKSEAASPATQDHGRSISYC*SRKRQI Trigger: AATCTGCCGCTTCCGAGACCAGCAGTATGAGATGCT...CCTGCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTCCGCAGACCACCTCCTaGGTCTGGGATAAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAPQTTS*VWDKPG Trigger: CCCTGGCTTATCCCAGACTCAGGAGGTGGTCTGCGG...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCCGTCCCAGCTGTGTCTaGAGTGACCACGGCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASRPSCV*SDHGLT Trigger: TGTAAGGCCGTGGTCACTGCAGACACAGCTGGGACG...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCAGCCTTCCAGACCCATaGGCTCCAGAGCCGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASSLPDP*APEPHR Trigger: TCTATGCGGCTCTGGAGCGCATGGGTCTGGAAGGCT...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCGACAGGGAAGGCAGGTaGAGTTGCCACAGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASDREGR*SCHRVL Trigger: CAGAACCCTGTGGCAACTCCACCTGCCTTCCCTGTC...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCTCTTCTGGGACTCACTaGCACAGTCACACCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASSSGTH*HSHTCQ Trigger: CTGGCAGGTGTGACTGTGCCAGTGAGTCCCAGAAGA...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR TCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTCAGCTGTGTCTGCAGTaGCCACGGCCTTACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAQLCLQ*PRPYKA Trigger: AGCCTTGTAAGGCCGTGGTCACTGCAGACACAGCTG...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR TCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTGCTGACGCCAGCGCTTaGGCATCTCATACTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAADASA*ASHTAG Trigger: ACCAGCAGTATGAGATGCTCAAGCGCTGGCGTCAGC...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR GCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTGTTGCCACAGGGTTCTaGGCAGGGGGCCTTCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAVATGF*AGGLHV Trigger: TACATGAAGGCCCCCTGCGCAGAACCCTGTGGCAAC...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTGACAGGGAAGGCAGGTaGAGTTGCCACAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDADREGR*SCHRVL Trigger: CAGAACCCTGTGGCAACTCCACCTGCCTTCCCTGTC...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR CCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCTGAGGCTGAGAGATaGGCAGTCTGTGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDASEAER*AVCGEA Trigger: GGCCTCACCACAGACTGCCCATCTCTCAGCCTCAGA...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCGACACAAGAGAAAGGTaGGCTTTTCCCACATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAEQPITWPLLVFLHDASDTRER*AFPTWL Trigger: GAGCCATGTGGGAAAAGCTCACCTTTCTCTTGTGTC...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR GCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTGTGGGTGTCCGACTTTaGCGAGCAGTTCTCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAVGVRL*RAVLKG Trigger: ACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCAC...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR CCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTTTCCCAGTACTGCTTaGAGGTGCCAGGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAFPSTA*RCQEGV Trigger: CACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAA...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR GCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTTGAGCATCTCATACTaGTGGTCTCGGAAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDALSISY*WSRKRQ Trigger: CTGCCGCTTCCGAGACCAGCAGTATGAGATGCTCAA...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR TCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTTCTCAAGGGTCACTTaGAGGGCCTCTTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAFSRVT*RASSSQ Trigger: CTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAA...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR GCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTGGACCCAAAACATCTaGTTCCAGCCACAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAWTQNI*FQPQTA Trigger: TGCTGTCTGTGGCTGGAAGCAGATGTTTTGGGTCCA...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025706.10 |
||
| CDS-3UTR CCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTACTCCTAGAAGCACCTaGACCCAAAACATCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDATPRST*TQNICF Trigger: GAAGCAGATGTTTTGGGTCCAGGTGCTTCTAGGAGT...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025706.10 |
||
| CDS-3UTR CCA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTCAGTCAGTCTTAAAGTaGTTGTCTCTGGTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTAEQPITWPLLVFLHDAQSVLK*LSLVKK Trigger: CTTCTTGACCAGAGACAACCACTTTAAGACTGACTG...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS GCA 90 bp | CGCTTCCCGCAGCCCCAGCGTGCGCACGAACTCCTTCCACCTTCGTaGTGGGACCGCATCCATCACATCGTAGAGCTGCGGGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFPQPQRAHELLPPS*WDRIHHIVELRARL Trigger: CAGCCTGGCCCGCAGCTCTACGATGTGATGGATGCGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGGAAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 90 bp | CACAGCAGCCGGAGAGCCCGCAGGGGGCGCTGGCGAGAGCGGAGATaGCAGAGGAGTTCCAAGAGTTCTGTTTGGCAGCTGATCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSRRARRGRWRERR*QRSSKSSVWQLIPG Trigger: CCCTGGGATCAGCTGCCAAACAGAACTCTTGGAACTCCTCTGGCATCTCCGCTCTCGCCAGCGCCCCCTGCGGGCTCTCCGGCTGCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS CCA 90 bp | TTCCCGCAGCCCCAGCGTGCGCACGAACTCCTTCCACCTTCGTGCTaGGACCGCATCCATCACATCGTAGAGCTGCGGGCCAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FPQPQRAHELLPPSC*DRIHHIVELRARLE Trigger: CTCCAGCCTGGCCCGCAGCTCTACGATGTGATGGATGCGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 90 bp | GGTGTCCGAGGGACAGGGAAGGCAGGTGGAGTTGCCACAGGGTTCTaGGCAGGGGGCCTTCATGTAGTGTCCCTTTGGGCAGCCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVRGTGKAGGVATGF*AGGLHVVSLWAAPA Trigger: TGCAGGGGCTGCCCAAAGGGACACTACATGAAGGCCCCCTGCGCAGAACCCTGTGGCAACTCCACCTGCCTTCCCTGTCCCTCGGACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | GACTCACTGGCACAGTCACACCTGCCAGACATGCCGCCCTGGCCCTaGCCACCAAGCAGCAGCAGCAGCAGCAGCAGCAGTGGTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSLAQSHLPDMPPWP*PPSSSSSSSSSGRN Trigger: GTTCCTACCACTGCTGCTGCTGCTGCTGCTGCTGCTTGGTGGCCAGGGCCAGGGCGGCATGTCTGGCAGGTGTGACTGTGCCAGTGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | GGCAGCCCCTGCAACAAAACGGGCCATACCTCTTCTGGGACTCACTaGCACAGTCACACCTGCCAGACATGCCGCCCTGGCCCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSPCNKTGHTSSGTH*HSHTCQTCRPGPGH Trigger: GTGGCCAGGGCCAGGGCGGCATGTCTGGCAGGTGTGACTGTGCCAGTGAGTCCCAGAAGAGGTATGGCCCGTTTTGTTGCAGGGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS CCA 90 bp | CTTGGAGGTGCCAGGAGGGTGTGGGCGCTGTCTGAGGCTGAGAGATaGGCAGTCTGTGGTGAGGCCAGGGTCTCCGTCCCAGCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGARRVWALSEAER*AVCGEARVSVPAVS Trigger: AGACACAGCTGGGACGGAGACCCTGGCCTCACCACAGACTGCCCATCTCTCAGCCTCAGACAGCGCCCACACCCTCCTGGCACCTCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | CCAAGCAGCAGCAGCAGCAGCAGCAGCAGTGGTAGGAACAGAGGCTaGAGAACACGTGCAGTTGACCCTGGTGTGGCTGCCCCAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSSSSSSSSGRNRG*RTRAVDPGVAAPGG Trigger: ACCTCCTGGGGCAGCCACACCAGGGTCAACTGCACGTGTTCTCCAGCCTCTGTTCCTACCACTGCTGCTGCTGCTGCTGCTGCTGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035275.8 |
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| CDS GCA 90 bp | TTTCCACCTCCACGGCTTCAATTTCCGCTTCCCGCAGCCCCAGCGTaGGCACGAACTCCTTCCACCTTCGTGCTGGGACCGCATCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FPPPRLQFPLPAAPA*ARTPSTFVLGPHPS Trigger: TGATGGATGCGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGGAAGCGGAAATTGAAGCCGTGGAGGTGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | TGTCCCTTTGGGCAGCCCCTGCAACAAAACGGGCCATACCTCTTCTaGGACTCACTGGCACAGTCACACCTGCCAGACATGCCGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPFGQPLQQNGPYLF*DSLAQSHLPDMPPW Trigger: CCAGGGCGGCATGTCTGGCAGGTGTGACTGTGCCAGTGAGTCCCAGAAGAGGTATGGCCCGTTTTGTTGCAGGGGCTGCCCAAAGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 90 bp | CTCTGGTCAAGAAGGTGTCCGAGGGACAGGGAAGGCAGGTGGAGTTaGCACAGGGTTCTGCGCAGGGGGCCTTCATGTAGTGTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWSRRCPRDREGRWS*HRVLRRGPSCSVPL Trigger: CAAAGGGACACTACATGAAGGCCCCCTGCGCAGAACCCTGTGGCAACTCCACCTGCCTTCCCTGTCCCTCGGACACCTTCTTGACCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | GTGGTACAGATTTTCCCAGTACTGCTTGGAGGTGCCAGGAGGGTGTaGGCGCTGTCTGAGGCTGAGAGATGGGCAGTCTGTGGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VVQIFPVLLGGARRV*ALSEAERWAVCGEA Trigger: GGCCTCACCACAGACTGCCCATCTCTCAGCCTCAGACAGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAAATCTGTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCTTTTCCCAGTACTGCTaGGAGGTGCCAGGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLQISKSEAASPATQDHGFSQYC*EVPGGC Trigger: ACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAAA...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACAAGCCAGGGGTCCAGTaGTTGCCTACCAACTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLQISKSEAASPATQDHKPGVQ*LPTNWT Trigger: TGTCCAGTTGGTAGGCAACAACTGGACCCCTGGCTT...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS TCA 90 bp | CCACAGTGGGTGTCCGACTTTGCCGAGCAGTTCTCAAGGGTCACTTaGAGGGCCTCTTCATCACAGACTTGGCAGCGGGTACAGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQWVSDFAEQFSRVT*RASSSQTWQRVQSV Trigger: GACTGACTGTACCCGCTGCCAAGTCTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCACTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACTCATGTAGTGTCCCTTaGGGCAGCCCCTGCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLQISKSEAASPATQDHSCSVP*GSPCNK Trigger: TTTGTTGCAGGGGCTGCCCAAAGGGACACTACATGA...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 90 bp | AGTTGTTGCCTACCAACTGGACAGTGGTACAGATTTTCCCAGTACTaGTTGGAGGTGCCAGGAGGGTGTGGGCGCTGTCTGAGGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCCLPTGQWYRFSQY*LEVPGGCGRCLRLR Trigger: TCTCAGCCTCAGACAGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAAATCTGTACCACTGTCCAGTTGGTAGGCAACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGTTCTCAAGGGTCACTaGAAGGGCCTCTTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLQISKSEAASPATQDHVLKGH*KGLFIT Trigger: TGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAAC...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 90 bp | CGCAGACCACCTCCTGAGTCTGGGATAAGCCAGGGGTCCAGTTGTTaGCTACCAACTGGACAGTGGTACAGATTTTCCCAGTACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRPPPESGISQGSSC*LPTGQWYRFSQYCL Trigger: CAAGCAGTACTGGGAAAATCTGTACCACTGTCCAGTTGGTAGGCAACAACTGGACCCCTGGCTTATCCCAGACTCAGGAGGTGGTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 90 bp | GCCTCTTCATCACAGACTTGGCAGCGGGTACAGTCAGTCTTAAAGTaGTTGTCTCTGGTCAAGAAGGTGTCCGAGGGACAGGGAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSQTWQRVQSVLK*LSLVKKVSEGQGRQ Trigger: CTGCCTTCCCTGTCCCTCGGACACCTTCTTGACCAGAGACAACCACTTTAAGACTGACTGTACCCGCTGCCAAGTCTGTGATGAAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACGGCTCAGTCTTAAAGTGGTaGTCTCTGGTCAAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQISKSEAASPATQDHGSVLKW*SLVKKV Trigger: CACCTTCTTGACCAGAGACAACCACTTTAAGACTGA...GCCGTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGCTGCAGATAAGCAAAAGTGAGGCAGCCAGCCCTGCTACGCAGGACCACTCAGTCTTAAAGTGGTaGTCTCTGGTCAAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLQISKSEAASPATQDHSVLKW*SLVKKV Trigger: CACCTTCTTGACCAGAGACAACCACTTTAAGACTGA...GTGGTCCTGCGTAGCAGGGCTGGCTGCCTCACTTTTGCTTATCTGCAGCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTTCCAAGCCAGGGGTCCAGTaGTTGCCTACCAACTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TAEQPITWPLLVFLHDASKPGVQ*LPTNWT Trigger: TGTCCAGTTGGTAGGCAACAACTGGACCCCTGGCTT...GGAAGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS-3UTR CAA 90 bp | TTAACAGCTGAGCAACCAATCACTTGGCCCCTTCTGGTATTTCTCCATGACGCTCCAGGGGTCCAGTTGTaGCCTACCAACTGGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTAEQPITWPLLVFLHDAPGVQL*PTNWTV Trigger: CACTGTCCAGTTGGTAGGCAACAACTGGACCCCTGG...AGCGTCATGGAGAAATACCAGAAGGGGCCAAGTGATTGGTTGCTCAGCTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS GCA 72 bp | GGCTGCGCAGGTCCTCGGCACAGCCTTCCAGACCCATaGGCTCCAGAGCCGCATAGATGGCACCGAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCAGPRHSLPDP*APEPHRWHRGL Trigger: CAGGCCTCGGTGCCATCTATGCGGCTCTGGAGCGCATGGGTCTGGAAGGCTGTGCCGAGGACCTGCGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS CCA 72 bp | CTGGAGCACAGCAGCCGGAGAGCCCGCAGGGGGCGCTaGCGAGAGCGGAGATGCCAGAGGAGTTCCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEHSSRRARRGR*RERRCQRSSKS Trigger: ACTCTTGGAACTCCTCTGGCATCTCCGCTCTCGCCAGCGCCCCCTGCGGGCTCTCCGGCTGCTGTGCTCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS GCA 72 bp | CCACGGCTTCAATTTCCGCTTCCCGCAGCCCCAGCGTaGGCACGAACTCCTTCCACCTTCGTGCTGGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: PRLQFPLPAAPA*ARTPSTFVLGP Trigger: CGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGGGAAGCGGAAATTGAAGCCGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS CCA 72 bp | CCCCAGCGTGCGCACGAACTCCTTCCACCTTCGTGCTaGGACCGCATCCATCACATCGTAGAGCTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQRAHELLPPSC*DRIHHIVELRA Trigger: GGCCCGCAGCTCTACGATGTGATGGATGCGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS GCA 72 bp | CAGCCCCAGCGTGCGCACGAACTCCTTCCACCTTCGTaGTGGGACCGCATCCATCACATCGTAGAGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QPQRAHELLPPS*WDRIHHIVELR Trigger: CCGCAGCTCTACGATGTGATGGATGCGGTCCCAGCACGAAGGTGGAAGGAGTTCGTGCGCACGCTGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS CCA 72 bp | CATGGCTCGGTGGAGCAGTCAACACACCAGCCTGACTaGCAGCCACAGTGGGTGTCCGACTTTGCCGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGSVEQSTHQPD*QPQWVSDFAEQ Trigger: CTGCTCGGCAAAGTCGGACACCCACTGTGGCTGCCAGTCAGGCTGGTGTGTTGACTGCTCCACCGAGCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
||
| CDS TCA 72 bp | TCCCAGGGTTGTGAGGCCTGTCCGCAGACCACCTCCTaGGTCTGGGATAAGCCAGGGGTCCAGTTGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQGCEACPQTTS*VWDKPGVQLLP Trigger: AGGCAACAACTGGACCCCTGGCTTATCCCAGACTCAGGAGGTGGTCTGCGGACAGGCCTCACAACCCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 72 bp | AGAAGGTGTCCGAGGGACAGGGAAGGCAGGTGGAGTTaGCACAGGGTTCTGCGCAGGGGGCCTTCATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RRCPRDREGRWS*HRVLRRGPSCS Trigger: ACTACATGAAGGCCCCCTGCGCAGAACCCTGTGGCAACTCCACCTGCCTTCCCTGTCCCTCGGACACCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS TCA 72 bp | GTGAGGCCAGGGTCTCCGTCCCAGCTGTGTCTGCAGTaGCCACGGCCTTACAAGGCTGCCATCGACAATATG | + |
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Preference number: 6 (lower is better) Translates to: VRPGSPSQLCLQ*PRPYKAAIDNM Trigger: CATATTGTCGATGGCAGCCTTGTAAGGCCGTGGTCACTGCAGACACAGCTGGGACGGAGACCCTGGCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 72 bp | TGCAACAAAACGGGCCATACCTCTTCTGGGACTCACTaGCACAGTCACACCTGCCAGACATGCCGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CNKTGHTSSGTH*HSHTCQTCRPG Trigger: GCCAGGGCGGCATGTCTGGCAGGTGTGACTGTGCCAGTGAGTCCCAGAAGAGGTATGGCCCGTTTTGTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 72 bp | GGGCAGCCCCTGCAACAAAACGGGCCATACCTCTTCTaGGACTCACTGGCACAGTCACACCTGCCAGACATG | + |
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Preference number: 6 (lower is better) Translates to: GQPLQQNGPYLF*DSLAQSHLPDM Trigger: CATGTCTGGCAGGTGTGACTGTGCCAGTGAGTCCCAGAAGAGGTATGGCCCGTTTTGTTGCAGGGGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 72 bp | GAGCAGTCAACACACCAGCCTGACTGGCAGCCACAGTaGGTGTCCGACTTTGCCGAGCAGTTCTCAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: EQSTHQPDWQPQ*VSDFAEQFSRV Trigger: GACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCACTGTGGCTGCCAGTCAGGCTGGTGTGTTGACTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS TCA 72 bp | GATGCCAGAGGAGTTCCAAGAGTTCTGTTTGGCAGCTaGTCCCAGGGTTGTGAGGCCTGTCCGCAGACCACC | + |
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Preference number: 6 (lower is better) Translates to: DARGVPRVLFGS*SQGCEACPQTT Trigger: GGTGGTCTGCGGACAGGCCTCACAACCCTGGGATCAGCTGCCAAACAGAACTCTTGGAACTCCTCTGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 72 bp | ATTTTCCCAGTACTGCTTGGAGGTGCCAGGAGGGTGTaGGCGCTGTCTGAGGCTGAGAGATGGGCAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: IFPVLLGGARRV*ALSEAERWAVC Trigger: ACAGACTGCCCATCTCTCAGCCTCAGACAGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 72 bp | AGAGCGGAGATGCCAGAGGAGTTCCAAGAGTTCTGTTaGGCAGCTGATCCCAGGGTTGTGAGGCCTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: RAEMPEEFQEFC*AADPRVVRPVR Trigger: GCGGACAGGCCTCACAACCCTGGGATCAGCTGCCAAACAGAACTCTTGGAACTCCTCTGGCATCTCCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 90 bp | GCCACAGTGGGTGTCCGACTTTGCCGAGCAGTTCTCAAGGGTCACTaGAAGGGCCTCTTCATCACAGACTTGGCAGCGGGTACAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ATVGVRLCRAVLKGH*KGLFITDLAAGTVS Trigger: ACTGACTGTACCCGCTGCCAAGTCTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCACTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 90 bp | AGTCAACACACCAGCCTGACTGGCAGCCACAGTGGGTGTCCGACTTaGCCGAGCAGTTCTCAAGGGTCACTTGAAGGGCCTCTTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: SQHTSLTGSHSGCPT*PSSSQGSLEGPLHH Trigger: GTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAACTGCTCGGCAAAGTCGGACACCCACTGTGGCTGCCAGTCAGGCTGGTGTGTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 72 bp | GGTGTCCGACTTTGCCGAGCAGTTCTCAAGGGTCACTaGAAGGGCCTCTTCATCACAGACTTGGCAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GVRLCRAVLKGH*KGLFITDLAAG Trigger: ACCCGCTGCCAAGTCTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAACTGCTCGGCAAAGTCGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 90 bp | TGTTGCCTACCAACTGGACAGTGGTACAGATTTTCCCAGTACTGCTaGGAGGTGCCAGGAGGGTGTGGGCGCTGTCTGAGGCTGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: CCLPTGQWYRFSQYC*EVPGGCGRCLRLRD Trigger: ATCTCTCAGCCTCAGACAGCGCCCACACCCTCCTGGCACCTCCAAGCAGTACTGGGAAAATCTGTACCACTGTCCAGTTGGTAGGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS TCA 72 bp | GTGTCCGACTTTGCCGAGCAGTTCTCAAGGGTCACTTaGAGGGCCTCTTCATCACAGACTTGGCAGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: VSDFAEQFSRVT*RASSSQTWQRV Trigger: TACCCGCTGCCAAGTCTGTGATGAAGAGGCCCTTCAAGTGACCCTTGAGAACTGCTCGGCAAAGTCGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS TCA 72 bp | TGGTGTTGTAGCCCCGCATGGGACACAAGAGAAAGGTaGGCTTTTCCCACATGGCTCGGTGGAGCAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WCCSPAWDTRER*AFPTWLGGAVN Trigger: GTTGACTGCTCCACCGAGCCATGTGGGAAAAGCTCACCTTTCTCTTGTGTCCCATGCGGGGCTACAACACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS GCA 72 bp | CCTCCTGAGTCTGGGATAAGCCAGGGGTCCAGTTGTTaGCTACCAACTGGACAGTGGTACAGATTTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PPESGISQGSSC*LPTGQWYRFSQ Trigger: CTGGGAAAATCTGTACCACTGTCCAGTTGGTAGGCAACAACTGGACCCCTGGCTTATCCCAGACTCAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CAA 90 bp | TCTTCATCACAGACTTGGCAGCGGGTACAGTCAGTCTTAAAGTGGTaGTCTCTGGTCAAGAAGGTGTCCGAGGGACAGGGAAGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSQTWQRVQSVLKW*SLVKKVSEGQGRQV Trigger: CACCTGCCTTCCCTGTCCCTCGGACACCTTCTTGACCAGAGACAACCACTTTAAGACTGACTGTACCCGCTGCCAAGTCTGTGATGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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| CDS CCA 72 bp | TCACAGACTTGGCAGCGGGTACAGTCAGTCTTAAAGTaGTTGTCTCTGGTCAAGAAGGTGTCCGAGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: SQTWQRVQSVLK*LSLVKKVSEGQ Trigger: CTGTCCCTCGGACACCTTCTTGACCAGAGACAACCACTTTAAGACTGACTGTACCCGCTGCCAAGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025706.10 ENSMUST00000035275.8 |
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