Pregenerated sensors for TNFRSF23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037613Ensembl transcript IDs: ENSMUST00000035742.14, ENSMUST00000152703.2, ENSMUST00000208017.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGATGAGTCCAGAGCAGAGAGAAAGTAGTAGATTAAACATGGCCTaGAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: WMSPEQRESSRLNMA*RLTQALRGGWWRVG Trigger: TCCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCCATGTTTAATCTACTACTTTCTCTCTGCTCTGGACTCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR GCA 90 bp | GAACAGGAAGACCAAAATCCTCTGGATTATATAGGGAAGAGCCTCTaGGGGAATGGCAGCCCAGTCCCTAGGTGGGAAGTTCAGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: EQEDQNPLDYIGKSL*GNGSPVPRWEVQDW Trigger: CCAATCCTGAACTTCCCACCTAGGGACTGGGCTGCCATTCCCGCAGAGGCTCTTCCCTATATAATCCAGAGGATTTTGGTCTTCCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 90 bp | GAAACAGATGAACTGCACACAGTGTTAGCTGTGGAGTTGCATTCCTaGAGGACAGGGATTCCTTGGGGACACTTGGTACATGGGCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: ETDELHTVLAVELHS*RTGIPWGHLVHGRH Trigger: ATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTCATCTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 90 bp | CTGTGGAGTTGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTTaGTACATGGGCGGCATGATTCCGGAAATTTTGGGTCATAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: LWSCIPGGQGFLGDT*YMGGMIPEILGHSS Trigger: ACTACTATGACCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 90 bp | CTGGAGGACAGGGATTCCTTGGGGACACTTGGTACATGGGCGGCATaGTTCCGGAAATTTTGGGTCATAGTAGTAAAGACCTATTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: LEDRDSLGTLGTWAA*FRKFWVIVVKTYLA Trigger: TGCCAAATAGGTCTTTACTACTATGACCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 90 bp | AAGGGTTTTATTGTAGATAGGAGGGAGAGCTCAGCCAGAGACATCTaGATGAGTCCAGAGCAGAGAGAAAGTAGTAGATTAAACATGGCC | + |
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Preference number: 1 (lower is better) Translates to: KGFIVDRRESSARDI*MSPEQRESSRLNMA Trigger: GGCCATGTTTAATCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTCCCTCCTATCTACAATAAAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR CCA 90 bp | TTTCTGAGTAGTGATAGCAAGGCATTGACCACACCCCTAGGCAAGTaGAAATTTCCTGCTATGGTGAGGAGAAGCAAATGGTTAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: FLSSDSKALTTPLGK*KFPAMVRRSKWLEQ Trigger: TTGCTCTAACCATTTGCTTCTCCTCACCATAGCAGGAAATTTCCACTTGCCTAGGGGTGTGGTCAATGCCTTGCTATCACTACTCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 90 bp | CCGTGCCTCCATGCTTCGCACTATGATAATCATGGACAGAACTTCTaGAACTGTAAGCCAGTCCCAATTCAATGTTTTCCTATATTAGAG | + |
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Preference number: 1 (lower is better) Translates to: PCLHASHYDNHGQNF*NCKPVPIQCFPILE Trigger: CTCTAATATAGGAAAACATTGAATTGGGACTGGCTTACAGTTTCAGAAGTTCTGTCCATGATTATCATAGTGCGAAGCATGGAGGCACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR TCA 90 bp | AATAGGAACCACAGTGGACCATTCATCCTGAGTTTCTTTTGGACCTaGTACCAGGACTTGCCTTCATCTAAATTGTTACTTACTCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: NRNHSGPFILSFFWT*YQDLPSSKLLLTLK Trigger: CTTGAGAGTAAGTAACAATTTAGATGAAGGCAAGTCCTGGTATCAGGTCCAAAAGAAACTCAGGATGAATGGTCCACTGTGGTTCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCACAGGTATGGGGAAACTTACTGAGCAGTaGGAAAAAGGCACTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: VEFTDPGKKVREVTTGMGKLTEQ*EKGTDH Trigger: GTGGTCAGTGCCTTTTTCTCACTGCTCAGTAAGTTT...CCCCATACCTGTGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CAA 90 bp | CTGGGATTTGAAACAGATGAACTGCACACAGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTTGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: LGFETDELHTVLAVE*HSWRTGIPWGHLVH Trigger: ATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTCATCTGTTTCAAATCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CAA 90 bp | TTCCTTGGGGACACTTGGTACATGGGCGGCATGATTCCGGAAATTTaGGGTCATAGTAGTAAAGACCTATTTGGCACTCGCATTTCCGGT | + |
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Preference number: 2 (lower is better) Translates to: FLGDTWYMGGMIPEI*GHSSKDLFGTRISG Trigger: ACCGGAAATGCGAGTGCCAAATAGGTCTTTACTACTATGACCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGGGAGAGCAAAGCACTGACCACACCCTAGTTACATGGAAGTTTACTGAGAGATTAAACATGGCCTaGAGACTGACTCAGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: MVGEQSTDHTLVTWKFTERLNMA*RLTQAL Trigger: TAAGGCCTGAGTCAGTCTGCAGGCCATGTTTAATCT...CTCAGTAAACTTCCATGTAACTAGGGTGTGGTCAGTGCTTTGCTCTCCCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGGGAGAGCAAAGCACTGACCACACCCTAGTTACATGGAAGTTTACTGAGAAATTTACTGAGCAGTaGGAAAAAGGCACTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: MVGEQSTDHTLVTWKFTEKFTEQ*EKGTDH Trigger: GTGGTCAGTGCCTTTTTCTCACTGCTCAGTAAATTT...CTCAGTAAACTTCCATGTAACTAGGGTGTGGTCAGTGCTTTGCTCTCCCACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCATGCTTCGCACTATGATAATCATGGACAGAACTTCTGAAACTGTAAGCTCAGCCACCATATTCTaGTCTGCAATCCAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASMLRTMIIMDRTSETVSSATIF*SAIQGR Trigger: TCTTCCCTGGATTGCAGACCAGAATATGGTGGCTGA...GCTTACAGTTTCAGAAGTTCTGTCCATGATTATCATAGTGCGAAGCATGGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CAA 90 bp | ATGTTCAAGCTATGTGTAGTGTGGCACACAGTCTCCTTTTATTGCTaGCAGATCAAGATGCAGAACTCTCAGCTTCTTCTCCAGCACCAT | + |
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Preference number: 2 (lower is better) Translates to: MFKLCVVWHTVSFYC*QIKMQNSQLLLQHH Trigger: ATGGTGCTGGAGAAGAAGCTGAGAGTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTACACATAGCTTGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR CAA 90 bp | TCCTATGTTCAAGCTATGTGTAGTGTGGCACACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCAGAACTCTCAGCTTCTTCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SYVQAMCSVAHSLLL*LADQDAELSASSPA Trigger: TGCTGGAGAAGAAGCTGAGAGTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTACACATAGCTTGAACATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATGGTATTATTAGGAGGTATGACCTTGTTGGAGGAAGTTTGTCACTGTGGGCATGGACAGAACTTCTaGAACTGTAAGCCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: EMVLLGGMTLLEEVCHCGHGQNF*NCKPVP Trigger: TGGGACTGGCTTACAGTTTCAGAAGTTCTGTCCATG...CCCACAGTGACAAACTTCCTCCAACAAGGTCATACCTCCTAATAATACCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGAGAGGAGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: GLQTDSGLKRRLVESGRGVLAVE*HSWRTG Trigger: CCCTGTCCTCCAGGAATGCAACTCCACAGCTAACAC...TCCTCTCCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | TGGGGGTGGCCAAAAAGCTTGATTGTTGGCTACTTCTaGGAGGAGCTGGCTGTCTCCCTGCTGTCCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WGWPKSLIVGYF*EELAVSLLSRL Trigger: CAGCCTGGACAGCAGGGAGACAGCCAGCTCCTCCCAGAAGTAGCCAACAATCAAGCTTTTTGGCCACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | GCTGTGGAGTTGCATTCCTGGAGGACAGGGATTCCTTaGGGACACTTGGTACATGGGCGGCATGATTCCGGA | + |
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Preference number: 3 (lower is better) Translates to: AVELHSWRTGIP*GHLVHGRHDSG Trigger: TCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | GGGGGCAGGTTATGCCAGGTAAGGACAGAAGGATGCTaGGAGAACCTGGAGGCCAGGTCTGCTTTGGTATGT | + |
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Preference number: 3 (lower is better) Translates to: GGRLCQVRTEGC*ENLEARSALVC Trigger: ACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCTTCTGTCCTTACCTGGCATAACCTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | GGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGAGAGGAGCCAGTTTCTGGGATTaGAAACAGATGAACTGCACA | + |
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Preference number: 3 (lower is better) Translates to: GLQTDSGLKRRLVESGRGASFWD*KQMNCT Trigger: TGTGCAGTTCATCTGTTTCAAATCCCAGAAACTGGC...TCCTCTCCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | GGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGAGAGGATTAGGAGGTATGACCTaGTTGGAGGAAGTTTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GLQTDSGLKRRLVESGRGLGGMT*LEEVCH Trigger: GTGACAAACTTCCTCCAACAAGGTCATACCTCCTAA...TCCTCTCCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR GCA 72 bp | ATTGGGGGCAGGTTATGCCAGGTAAGGACAGAAGGATaGTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: IGGRLCQVRTEG*WENLEARSALV Trigger: TACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCTTCTGTCCTTACCTGGCATAACCTGCCCCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 72 bp | ACCACACCCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGAGCAGTGCACTGACCACACCTCTAGCCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: TTPLGKWKFTEQ*EQCTDHTSSQG Trigger: CCCTTGGCTAGAGGTGTGGTCAGTGCACTGCTCTCACTGCTCAGTAAATTTCCACTTGCCTAGGGGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 72 bp | ACCACACCCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGAGCAAGGCACTGACCACACCCCTAGCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: TTPLGKWKFTEQ*EQGTDHTPSQE Trigger: CTCTTGGCTAGGGGTGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAATTTCCACTTGCCTAGGGGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | GGCATCATTATGGGGGTGGCCAAAAAGCTTGATTGTTaGCTACTTCTGGGAGGAGCTGGCTGTCTCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GIIMGVAKKLDC*LLLGGAGCLPA Trigger: AGCAGGGAGACAGCCAGCTCCTCCCAGAAGTAGCCAACAATCAAGCTTTTTGGCCACCCCCATAATGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | AAACATGGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGTTAACCTGTGGTGGTTaGAATTGGTTTGGCCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: KHGLQTDSGLKRRLVESGLTCGG*NWFGPH Trigger: ATGAGGGCCAAACCAATTCAAACCACCACAGGTTAA...CCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCCATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR GCA 72 bp | ACTGGTGGCAGAACAGTCAGCCACCATATTCTGGTCTaGAATCCAGGGAAGAATAGGGTCAGGTTGTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: TGGRTVSHHILV*NPGKNRVRLWC Trigger: GCACCACAACCTGACCCTATTCTTCCCTGGATTGCAGACCAGAATATGGTGGCTGACTGTTCTGCCACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR GCA 72 bp | CTCTCAGCTTCTTCTCCAGCACCATGTGTGCCTCCGTaGCTCCATGCTTCGCACTATGATAATCATGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LSASSPAPCVPP*LHASHYDNHGQ Trigger: CTGTCCATGATTATCATAGTGCGAAGCATGGAGGCACGGAGGCACACATGGTGCTGGAGAAGAAGCTGAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR GCA 72 bp | CCAGAGCAGAGAGAAAGTAGTAGATTAAACATGGCCTaGAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: PEQRESSRLNMA*RLTQALRGGWW Trigger: CCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCCATGTTTAATCTACTACTTTCTCTCTGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR GCA 72 bp | GACCAAAATCCTCTGGATTATATAGGGAAGAGCCTCTaGGGGAATGGCAGCCCAGTCCCTAGGTGGGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: DQNPLDYIGKSL*GNGSPVPRWEV Trigger: AACTTCCCACCTAGGGACTGGGCTGCCATTCCCGCAGAGGCTCTTCCCTATATAATCCAGAGGATTTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | AAACATGGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGGTCTCCTTTTATTGCTaGCAGATCAAGATGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KHGLQTDSGLKRRLVESGVSFYC*QIKMQN Trigger: GTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGAC...CCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCCATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR TCA 72 bp | ACCACACCCCTAGCCAAGAGGAAATTTACTGAGAAGTaGGAGCAGTGCAGTGATCACACCCCTAGGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: TTPLAKRKFTEK*EQCSDHTPRQV Trigger: CACTTGCCTAGGGGTGTGATCACTGCACTGCTCTCACTTCTCAGTAAATTTCCTCTTGGCTAGGGGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | GAACTGCACACAGTGTTAGCTGTGGAGTTGCATTCCTaGAGGACAGGGATTCCTTGGGGACACTTGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: ELHTVLAVELHS*RTGIPWGHLVH Trigger: ATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCTCAGCCAGAGACATCTGGATGAGTCCAGAGCAGAGAGAAAGTAGTAGAAGCTGCAGAGGGCAATaGTTAACCTGTGGTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: ESSARDIWMSPEQRESSRSCRGQ*LTCGGL Trigger: CAAACCACCACAGGTTAACAATTGCCCTCTGCAGCT...TCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR TCA 72 bp | ACCACACCCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGCACAAGGCACTAACCAAACCCATAGGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: TTPLGKWKFTEQ*AQGTNQTHRQV Trigger: CACTTGCCTATGGGTTTGGTTAGTGCCTTGTGCTCACTGCTCAGTAAATTTCCACTTGCCTAGGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | AGCATGGTTTGGCTAGGAGAGGCTGAGTCTCTTGGATaGGGTCATATATATTCCTCTCTGGTTTCAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: SMVWLGEAESLG*GHIYSSLVSGT Trigger: GGTGCCTGAAACCAGAGAGGAATATATATGACCCCATCCAAGAGACTCAGCCTCTCCTAGCCAAACCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 72 bp | AGGGATTCCTTGGGGACACTTGGTACATGGGCGGCATaGTTCCGGAAATTTTGGGTCATAGTAGTAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: RDSLGTLGTWAA*FRKFWVIVVKT Trigger: GGTCTTTACTACTATGACCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR TCA 72 bp | GGGGAAGGGAAGCCAGTGAGGTGGAGAAGTCTAAGGTaGGGTCATGTTCTTCAGTATGTTAATAGGAACCAC | + |
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Preference number: 3 (lower is better) Translates to: GEGKPVRWRSLR*GHVLQYVNRNH Trigger: GTGGTTCCTATTAACATACTGAAGAACATGACCTCACCTTAGACTTCTCCACCTCACTGGCTTCCCTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR TCA 72 bp | TTGGGGACACATAAATGTTTGAGGGCTCTGTCCAACTaGCCCCACTCCTCATCTGGAAATCATAGGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: LGTHKCLRALSN*PHSSSGNHRRA Trigger: AGCTCTCCTATGATTTCCAGATGAGGAGTGGGGTCAGTTGGACAGAGCCCTCAAACATTTATGTGTCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR GCA 72 bp | GGCATTGACCACACCCCTAGGCAAGTGGAAATTTCCTaGTATGGTGAGGAGAAGCAAATGGTTAGAGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: GIDHTPRQVEIS*YGEEKQMVRAS Trigger: ACTTGCTCTAACCATTTGCTTCTCCTCACCATAGCAGGAAATTTCCACTTGCCTAGGGGTGTGGTCAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR CCA 72 bp | AGGAGGTATGACCTTGTTGGAGGAAGTTTGTCACTGTaGGGACAGGCTTTGAGGTCTCCTATGTTCAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: RRYDLVGGSLSL*GQALRSPMFKL Trigger: TAGCTTGAACATAGGAGACCTCAAAGCCTGTCCCCACAGTGACAAACTTCCTCCAACAAGGTCATACCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
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| 3UTR CCA 72 bp | AGTGATAGCAAGGCATTGACCACACCCCTAGGCAAGTaGAAATTTCCTGCTATGGTGAGGAGAAGCAAATGG | + |
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Preference number: 3 (lower is better) Translates to: SDSKALTTPLGK*KFPAMVRRSKW Trigger: CCATTTGCTTCTCCTCACCATAGCAGGAAATTTCCACTTGCCTAGGGGTGTGGTCAATGCCTTGCTATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | TCAAGATGCAGAACTCTCAGCTTCTTCTCCAGCACCATGTGTGCCTCCGTGCCTATGATTCCGGAAATTTaGGGTCATAGTAGTAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SRCRTLSFFSSTMCASVPMIPEI*GHSSKD Trigger: GTCTTTACTACTATGACCCAAAATTTCCGGAATCAT...AGGCACGGAGGCACACATGGTGCTGGAGAAGAAGCTGAGAGTTCTGCATCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGGGAGAGCAAAGCACTGACCACACCCTAGTTACATGGAAGTTTACTGAGGAGAGGCTGAGTCTCTaGGATGGGGTCATATATATT | + |
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Preference number: 3 (lower is better) Translates to: MVGEQSTDHTLVTWKFTEERLSL*DGVIYI Trigger: AATATATATGACCCCATCCAAGAGACTCAGCCTCTC...CTCAGTAAACTTCCATGTAACTAGGGTGTGGTCAGTGCTTTGCTCTCCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
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| 3UTR GCA 72 bp | GGCACACAGTCTCCTTTTATTGCTTGCAGATCAAGATaGAGAACTCTCAGCTTCTTCTCCAGCACCATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTQSPFIACRSR*RTLSFFSSTMC Trigger: ACACATGGTGCTGGAGAAGAAGCTGAGAGTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCATATATATTCCTCTCTGGTTTCAGGCACCAGATGTACAAAGTGAGGACCACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GVIYIPLWFQAPDVQSEDHSLLL*LADQDA Trigger: TGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTG...GTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATATATGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCTCAGCCAGAGACATCTGGATGAGTCCAGAGCAGAGAGAAAGTAGTAGACATGTGTTTGAATGCTaGCCTCATAAGAAATGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ESSARDIWMSPEQRESSRHVFEC*PHKKWY Trigger: ATACCATTTCTTATGAGGCAAGCATTCAAACACATG...TCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CCA 72 bp | CTGAGTCTCTTGGATGGGGTCATATATATTCCTCTCTaGTTTCAGGCACCAGATGTACAAAGTGAGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLLDGVIYIPL*FQAPDVQSEDK Trigger: TTTGTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATATATGACCCCATCCAAGAGACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCATATATATTCCTCTCTGGTTTCAGGCACCAGATGTACAAAGTGAGGACAATAAAATGAAAGAGTaGCCTCCATGGTTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVIYIPLWFQAPDVQSEDNKMKE*PPWFLF Trigger: GAAGAGAAACCATGGAGGCAACTCTTTCATTTTATT...GTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATATATGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGGTATTATTAGGAGGTATGACCTTGTTGGAGGAAGTTTGTCACTGTGGGCACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: EMVLLGGMTLLEEVCHCGHSLLL*LADQDA Trigger: TGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTG...CCCACAGTGACAAACTTCCTCCAACAAGGTCATACCTCCTAATAATACCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTGATCCATCCATGCATACCTTAGGAAGTCGTCAAACCAACAGCATGGTTTTGCCTTCATCTAAATaGTTACTTACTCTCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSDPSMHTLGSRQTNSMVLPSSK*LLTLKE Trigger: CTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAA...AACCATGCTGTTGGTTTGACGACTTCCTAAGGTATGCATGGATGGATCACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR GCA 72 bp | TGGTTTGGCCCTCATAGACTCATGTGTTTGAATGCTTaGCTCATAAGAAATGGTATTATTAGGAGGTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: WFGPHRLMCLNA*LIRNGIIRRYD Trigger: GTCATACCTCCTAATAATACCATTTCTTATGAGGCAAGCATTCAAACACATGAGTCTATGAGGGCCAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | GTGGGACCATCTGGTGCTAGGAGTGCACACACCCAATaGAAGGATTCTGTGAGGCTGGGCTGGAGCACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VGPSGARSAHTQ*KDSVRLGWSTY Trigger: ATAGGTGCTCCAGCCCAGCCTCACAGAATCCTTCAATTGGGTGTGTGCACTCCTAGCACCAGATGGTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR CAA 72 bp | CAAGGAGGGCCTCCACCAGAGAGCTGCAGAGGGCAATaGTTAACCTGTGGTGGTTTGAATTGGTTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGPPPESCRGQ*LTCGGLNWFGP Trigger: AGGGCCAAACCAATTCAAACCACCACAGGTTAACAATTGCCCTCTGCAGCTCTCTGGTGGAGGCCCTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGTCAGCCACCATATTCTaGTCTTTATCACAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHGLQTDSGLKRRLVESGSATIF*SLSQVE Trigger: CTCCACCTGTGATAAAGACCAGAATATGGTGGCTGA...CCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCCATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | TTGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTaGGTACATGGGCGGCATGATTCCGGAAATTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSWRTGIPWGH*VHGRHDSGNFG Trigger: CCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGCTCAGCCAGAGACATCTGGATGAGTCCAGAGCAGAGAGAAAGTAGTAGAAGCAAGAGGAACCAGTaGCTCAGACTGGAGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSARDIWMSPEQRESSRSKRNQ*LRLETW Trigger: CCACGTCTCCAGTCTGAGTCACTGGTTCCTCTTGCT...TCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | CTTGTTGGAGGAAGTTTGTCACTGTGGGGACAGGCTTaGAGGTCTCCTATGTTCAAGCTATGTGTAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVGGSLSLWGQA*RSPMFKLCVVW Trigger: CCACACTACACATAGCTTGAACATAGGAGACCTCAAAGCCTGTCCCCACAGTGACAAACTTCCTCCAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | GAGGTGAATTCCAGGTTTGGAGTTCACTATGGTAGGTaGCAGAAGCCTGCAGGAACAAGTGATCCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EVNSRFGVHYGR*QKPAGTSDPSM Trigger: CATGGATGGATCACTTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAACTCCAAACCTGGAATTCACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGAAGCAAGAGGAACCAGTaGCTCAGACTGGAGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKELPPWFLFTAIKGSYRSKRNQ*LRLETW Trigger: CCACGTCTCCAGTCTGAGTCACTGGTTCCTCTTGCT...TCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGAGAGCTGCAGAGCATTATCTTTCCCTGTaGATGTTCCTGGGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SSKLLLTLKEGLHQRAAEHYLSL*MFLGDT Trigger: AGTGTCACCCAGGAACATTCACAGGGAAAGATAATG...CTCTGCAGCTCTCTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCATCTGTAGAACCTCGCATTTCCGGTCACTaGTGGCAGAACAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVSLHSNKRKLQTPSVEPRISGH*WQNSQP Trigger: TGGCTGACTGTTCTGCCACCAGTGACCGGAAATGCG...AGGTTCTACAGATGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152703.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCATCTGAGGACAGGGATTCCTTaGGGACACCTTTATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPWFLFTAIKGSYRHHLRTGIP*GHLYHR Trigger: CCTGTGATAAAGGTGTCCCCAAGGAATCCCTGTCCT...CAGATGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
||
| 3UTR CAA 72 bp | GACACTTGGTACATGGGCGGCATGATTCCGGAAATTTaGGGTCATAGTAGTAAAGACCTATTTGGCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DTWYMGGMIPEI*GHSSKDLFGTR Trigger: GCGAGTGCCAAATAGGTCTTTACTACTATGACCCAAAATTTCCGGAATCATGCCGCCCATGTACCAAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| 3UTR CAA 72 bp | GAGAGCTGCAGAGGGCAATTGTTAACCTGTGGTGGTTaGAATTGGTTTGGCCCTCATAGACTCATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESCRGQLLTCGG*NWFGPHRLMCL Trigger: CAAACACATGAGTCTATGAGGGCCAAACCAATTCAAACCACCACAGGTTAACAATTGCCCTCTGCAGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | TTCCGGAAATTTTGGGTCATAGTAGTAAAGACCTATTaGGCACTCGCATTTCCGGTCACTGGTGGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FRKFWVIVVKTY*ALAFPVTGGRT Trigger: TGTTCTGCCACCAGTGACCGGAAATGCGAGTGCCAAATAGGTCTTTACTACTATGACCCAAAATTTCCGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035742.14 |
||
| CDS-3UTR TCA 90 bp | ACAGACACCATCTGTAGAACCTTTATCTTCTTCAGATACAGAAGACAATTAGCAAGCAAGAGGAACCAGTaGCTCAGACTGGAGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDTICRTFIFFRYRRQLASKRNQ*LRLETW Trigger: CCACGTCTCCAGTCTGAGTCACTGGTTCCTCTTGCT...TGCTAATTGTCTTCTGTATCTGAAGAAGATAAAGGTTCTACAGATGGTGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000208017.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGACTTGCCTTCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCCAAAGTTCACAATCATaGAGGCCATTATCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRTCLHLNCYLLSRRASTQSSQS*RPLSFP Trigger: AGGGAAAGATAATGGCCTGCATGATTGTGAACTTTG...GGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAAGTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| 3UTR CAA 72 bp | CAAGCTATGTGTAGTGTGGCACACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCAGAACTCTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAMCSVAHSLLL*LADQDAELSAS Trigger: AGAAGCTGAGAGTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTACACATAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACATTATCTTTCCCTGTaGATGTTCCTGGGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: MKELPPWFLFTAIKGSYRHYLSL*MFLGDT Trigger: AGTGTCACCCAGGAACATTCACAGGGAAAGATAATG...TCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCACAAAGTTCACAATCATaGAGGCCATTATCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVASMVSLHSNKRKLQTPQSSQS*RPLSFP Trigger: AGGGAAAGATAATGGCCTGCATGATTGTGAACTTTG...TGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACAGGAACAGCCAGTTTCTaGGATTTGAAACAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERVASMVSLHSNKRKLQTGTASF*DLKQMN Trigger: GTTCATCTGTTTCAAATCCCAGAAACTGGCTGTTCC...TGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCAACAGTTGAAGGAGTATaGTTCAGGCATAGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RVASMVSLHSNKRKLQTPTVEGV*FRHSKY Trigger: ATATTTGCTATGCCTGAATCATACTCCTTCAACTGT...TGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCATGCTTCGCACTATGATAATCATGGACAGAACTTCTGAAACTGTAAGCACAGTTGAAGGAGTATaGTTCAGGCATAGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ASMLRTMIIMDRTSETVSTVEGV*FRHSKY Trigger: ATATTTGCTATGCCTGAATCATACTCCTTCAACTGT...GCTTACAGTTTCAGAAGTTCTGTCCATGATTATCATAGTGCGAAGCATGGAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR TCA 90 bp | GCTACAGACACCATCTGTAGAACCTTTATCTTCTTCAGATACAGAAGACAATTACATTATCTTTCCCTGTaGATGTTCCTGGGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: ATDTICRTFIFFRYRRQLHYLSL*MFLGDT Trigger: AGTGTCACCCAGGAACATTCACAGGGAAAGATAATG...TAATTGTCTTCTGTATCTGAAGAAGATAAAGGTTCTACAGATGGTGTCTGTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000208017.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGCAAAGTTCACAATCATaGAGGCCATTATCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NERVASMVSLHSNKRKLQQSSQS*RPLSFP Trigger: AGGGAAAGATAATGGCCTGCATGATTGTGAACTTTG...CTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| 3UTR CAA 72 bp | GGTTTGAATTGGTTTGGCCCTCATAGACTCATGTGTTaGAATGCTTGCCTCATAAGAAATGGTATTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLNWFGPHRLMC*NACLIRNGIIR Trigger: CCTAATAATACCATTTCTTATGAGGCAAGCATTCAAACACATGAGTCTATGAGGGCCAAACCAATTCAAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CCA 90 bp | AATAAAAGGAAGCTACAGACACCATCTGTAGAACCTTTATCTTCTTCAGATACAGGAACAGCCAGTTTCTaGGATTTGAAACAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKRKLQTPSVEPLSSSDTGTASF*DLKQMN Trigger: GTTCATCTGTTTCAAATCCCAGAAACTGGCTGTTCC...TGTATCTGAAGAAGATAAAGGTTCTACAGATGGTGTCTGTAGCTTCCTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCAGACTGACTCAGGCCTTAAGAGGCGGCTGGTGGAGAGTGGGAGAGGATCACCATCGGGACAGTaGAAGGAGTATGATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLQTDSGLKRRLVESGRGSPSGQ*KEYDSG Trigger: GCCTGAATCATACTCCTTCAACTGTCCCGATGGTGA...TCCTCTCCCACTCTCCACCAGCCGCCTCTTAAGGCCTGAGTCAGTCTGCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CAA 90 bp | GATAGGAGGGAGAGCTCAGCCAGAGACATCTGGATGAGTCCAGAGCAGAGAGAACTTCTCACATTGTCCTaGAGTATGGGGGATTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRRESSARDIWMSPEQRELLTLS*SMGDFA Trigger: TGCAAAATCCCCCATACTCAAGGACAATGTGAGAAG...TTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTCCCTCCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CAA 90 bp | CAGGACTTGCCTTCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGTCACCATCGGGACAGTaGAAGGAGTATGATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDLPSSKLLLTLKEGLHQSPSGQ*KEYDSG Trigger: GCCTGAATCATACTCCTTCAACTGTCCCGATGGTGA...CTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAAGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS CCA 90 bp | CATAGTAGTAAAGACCTATTTGGCACTCGCATTTCCGGTCACTGGTaGCAGAACAGTCAGCCACCATATTCTGGTCTTTATCACAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSKDLFGTRISGHW*QNSQPPYSGLYHRW Trigger: CCACCTGTGATAAAGACCAGAATATGGTGGCTGACTGTTCTGCCACCAGTGACCGGAAATGCGAGTGCCAAATAGGTCTTTACTACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152703.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCCGGATCTCTGTGAGTTTGAGTCCAGCCTGGTCTTCAAATCAAGTTCACTTCTCACATTGTCCTaGAGTATGGGGGATTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPDLCEFESSLVFKSSSLLTLS*SMGDFA Trigger: TGCAAAATCCCCCATACTCAAGGACAATGTGAGAAG...TGAACTTGATTTGAAGACCAGGCTGGACTCAAACTCACAGAGATCCGGACTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCATCTGTAGAACCTGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MVSLHSNKRKLQTPSVEPVLAVE*HSWRTG Trigger: CCCTGTCCTCCAGGAATGCAACTCCACAGCTAACAC...AGGTTCTACAGATGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KMKELPPWFLFTAIKGSYVLAVE*HSWRTG Trigger: CCCTGTCCTCCAGGAATGCAACTCCACAGCTAACAC...GTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCCTTCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGAGAGGCCAGTTTCTGGGATTaGAAACAGATGAACTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TCLHLNCYLLSRRASTREASFWD*KQMNCT Trigger: TGTGCAGTTCATCTGTTTCAAATCCCAGAAACTGGC...CTCTCTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152703.2 |
||
| CDS CCA 90 bp | ACAAATGTACCTGAGGGACAGGTCTTGCAACAGACATCATTAGACTaGTATTCACCATCGGGACAGTTGAAGGAGTATGATTCAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TNVPEGQVLQQTSLD*YSPSGQLKEYDSGI Trigger: TATGCCTGAATCATACTCCTTCAACTGTCCCGATGGTGAATACCAGTCTAATGATGTCTGTTGCAAGACCTGTCCCTCAGGTACATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGACACCATCTGTAGAACCTTCACCATCGGGACAGTaGAAGGAGTATGATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MVSLHSNKRKLQTPSVEPSPSGQ*KEYDSG Trigger: GCCTGAATCATACTCCTTCAACTGTCCCGATGGTGA...AGGTTCTACAGATGGTGTCTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGAGAGCTGCAGAGGGCAATATGATTCCGGAAATTTaGGGTCATAGTAGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLLLTLKEGLHQRAAEGNMIPEI*GHSSKD Trigger: GTCTTTACTACTATGACCCAAAATTTCCGGAATCAT...ATTGCCCTCTGCAGCTCTCTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152703.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAAGAGTTGCCTCCATGGTTTCTCTTCACAGCAATAAAAGGAAGCTACAGGCCAGTTTCTGGGATTaGAAACAGATGAACTGCACA | + |
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Preference number: 5 (lower is better) Translates to: NERVASMVSLHSNKRKLQASFWD*KQMNCT Trigger: TGTGCAGTTCATCTGTTTCAAATCCCAGAAACTGGC...CTGTAGCTTCCTTTTATTGCTGTGAAGAGAAACCATGGAGGCAACTCTTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CCA 72 bp | GAACTGCACACAGTGTTAGCTGTGGAGTTGCATTCCTaGAGGACAGGGATTCCTTGGGGACACCTTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: ELHTVLAVELHS*RTGIPWGHLYH Trigger: GTGATAAAGGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
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| CDS CAA 72 bp | AGCTGTGGAGTTGCATTCCTGGAGGACAGGGATTCCTaGGGGACACCTTTATCACAGGTGGAGCAAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SCGVAFLEDRDS*GTPLSQVEQSS Trigger: TGAACTTTGCTCCACCTGTGATAAAGGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
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| CDS TCA 72 bp | ATTGTCCTTGAGTATGGGGGATTTTGCAGGGCGCCTTaGCAAATGTACCTGAGGGACAGGTCTTGCAACAGA | + |
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Preference number: 6 (lower is better) Translates to: IVLEYGGFCRAP*QMYLRDRSCNR Trigger: TCTGTTGCAAGACCTGTCCCTCAGGTACATTTGTCAAGGCGCCCTGCAAAATCCCCCATACTCAAGGACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CAA 72 bp | CAGGGCGCCTTGACAAATGTACCTGAGGGACAGGTCTaGCAACAGACATCATTAGACTGGTATTCACCATCG | + |
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Preference number: 6 (lower is better) Translates to: QGALTNVPEGQV*QQTSLDWYSPS Trigger: CGATGGTGAATACCAGTCTAATGATGTCTGTTGCAAGACCTGTCCCTCAGGTACATTTGTCAAGGCGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CAA 72 bp | TTTCCCTGTGAATGTTCCTGGGTGACACTTCTCACATaGTCCTTGAGTATGGGGGATTTTGCAGGGCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FPCECSWVTLLT*SLSMGDFAGRL Trigger: AAGGCGCCCTGCAAAATCCCCCATACTCAAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACAGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CAA 90 bp | CTGGGATTTGAAACAGATGAACTGCACACAGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGGATTCCTTGGGGACACCTTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: LGFETDELHTVLAVE*HSWRTGIPWGHLYH Trigger: GTGATAAAGGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTCATCTGTTTCAAATCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
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| CDS CAA 72 bp | TGTGAATGTTCCTGGGTGACACTTCTCACATTGTCCTaGAGTATGGGGGATTTTGCAGGGCGCCTTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: CECSWVTLLTLS*SMGDFAGRLDK Trigger: TTTGTCAAGGCGCCCTGCAAAATCCCCCATACTCAAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CCA 72 bp | CCTGAGGGACAGGTCTTGCAACAGACATCATTAGACTaGTATTCACCATCGGGACAGTTGAAGGAGTATGAT | + |
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Preference number: 6 (lower is better) Translates to: PEGQVLQQTSLD*YSPSGQLKEYD Trigger: ATCATACTCCTTCAACTGTCCCGATGGTGAATACCAGTCTAATGATGTCTGTTGCAAGACCTGTCCCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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| CDS CCA 72 bp | AGGACAGGGATTCCTTGGGGACACCTTTATCACAGGTaGAGCAAAGTTCACAATCATGCAGGCCATTATCTT | + |
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Preference number: 6 (lower is better) Translates to: RTGIPWGHLYHR*SKVHNHAGHYL Trigger: AAGATAATGGCCTGCATGATTGTGAACTTTGCTCCACCTGTGATAAAGGTGTCCCCAAGGAATCCCTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208017.2 |
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| CDS TCA 72 bp | AGACTGGTATTCACCATCGGGACAGTTGAAGGAGTATaGTTCAGGCATAGCAAATATTACCGGCAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: RLVFTIGTVEGV*FRHSKYYRQEQ Trigger: CTGTTCTTGCCGGTAATATTTGCTATGCCTGAATCATACTCCTTCAACTGTCCCGATGGTGAATACCAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035742.14 ENSMUST00000152703.2 ENSMUST00000208017.2 |
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