Pregenerated sensors for TNFRSF22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010751Ensembl transcript IDs: ENSMUST00000075588.13, ENSMUST00000084396.4, ENSMUST00000146692.8, ENSMUST00000171066.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTATTTCTGGGAGGAGCTGGCTGTCTCCCTGCTGTCCAGGCTGTaGGACCATCTGGTGCTAGGAGTGCACACCCCAATTCAAGGACCC | + |
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Preference number: 1 (lower is better) Translates to: GYFWEELAVSLLSRL*DHLVLGVHTPIQGP Trigger: GGGTCCTTGAATTGGGGTGTGCACTCCTAGCACCAGATGGTCCCACAGCCTGGACAGCAGGGAGACAGCCAGCTCCTCCCAGAAATAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR GCA 90 bp | CCAAGCATAACCTCCATCCCGACCACCATGGCCACTTTGTTCATGTaGCCATTGAGCAATGACAGGGATGGCTGGGGAGAGAGGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: PSITSIPTTMATLFM*PLSNDRDGWGERLT Trigger: AGTCAGCCTCTCTCCCCAGCCATCCCTGTCATTGCTCAATGGGCACATGAACAAAGTGGCCATGGTGGTCGGGATGGAGGTTATGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CCA 90 bp | TGGCTGGTCACCTCGAGGAATGATGCCATATCTGGGGCTCAGTGTTaGTTTCGGCTGTTGGCAGATCTGGCAATCAGCAGCAGCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: WLVTSRNDAISGAQC*FRLLADLAISSSCS Trigger: GCTACAGCTGCTGCTGATTGCCAGATCTGCCAACAGCCGAAACCAACACTGAGCCCCAGATATGGCATCATTCCTCGAGGTGACCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CCA 90 bp | ATGGCCACTTTGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTaGGGAGAGAGGCTGACTGTCCACAGAAGGGGTCATCGTATCCAC | + |
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Preference number: 1 (lower is better) Translates to: MATLFMCPLSNDRDG*GERLTVHRRGHRIH Trigger: GTGGATACGATGACCCCTTCTGTGGACAGTCAGCCTCTCTCCCCAGCCATCCCTGTCATTGCTCAATGGGCACATGAACAAAGTGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CCA 90 bp | ATCTACTCCAGTAAGAACAAAACGCTGTCCTTTCCACGAAGGAAGTaGTCCAATGTAGTCAACCTGCCACCAGGTTGCTGGCTGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: IYSSKNKTLSFPRRK*SNVVNLPPGCWLVT Trigger: GGTGACCAGCCAGCAACCTGGTGGCAGGTTGACTACATTGGACCACTTCCTTCGTGGAAAGGACAGCGTTTTGTTCTTACTGGAGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CCA 90 bp | AACAAGGAAGACCAAAATCCTCTGGATTATATAGGGAAGAGCCTCTaGGGGAATGGCAGCCCAGTCCCTAGGTGGAAAGCTCAGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: NKEDQNPLDYIGKSL*GNGSPVPRWKAQDW Trigger: CCAATCCTGAGCTTTCCACCTAGGGACTGGGCTGCCATTCCCCCAGAGGCTCTTCCCTATATAATCCAGAGGATTTTGGTCTTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR CCA 90 bp | CAAACCAACAGCATGGTTTGGCTAGGAGAGGCTGAGTCTCTTGGATaGGGGTCATATTCCTCTCTGGTTTCAGGCACCAGATGTACAAAG | + |
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Preference number: 1 (lower is better) Translates to: QTNSMVWLGEAESLG*GSYSSLVSGTRCTK Trigger: CTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATGACCCCCATCCAAGAGACTCAGCCTCTCCTAGCCAAACCATGCTGTTGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR TCA 90 bp | GAGAAGCTAGGGGAAGGGAAGTCAGTGAGGTGGAGACGTGTAAGGTaGGGTCATGTTCTTCAGTATGTTAATAGGAACCACAGTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: EKLGEGKSVRWRRVR*GHVLQYVNRNHSGP Trigger: TGGTCCACTGTGGTTCCTATTAACATACTGAAGAACATGACCTCACCTTACACGTCTCCACCTCACTGACTTCCCTTCCCCTAGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR TCA 90 bp | AAGCAAATGGTTAGCGCAAGTAGAGGGGAGAAGCAGCTGAAGAGGTaGATTCCAGGTTTGGAGTTCACTATGGTAGGTTGCAGAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KQMVSASRGEKQLKR*IPGLEFTMVGCRSL Trigger: CAGGCTTCTGCAACCTACCATAGTGAACTCCAAACCTGGAATTCACCTCTTCAGCTGCTTCTCCCCTCTACTTGCGCTAACCATTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR TCA 90 bp | TGCCTGACCATCCAGCCAATCCATTGGCTACAGCCCATGAGTCAGTaGATAATCGTACATCTGGCCATTTCTTCTTGCAAACAAACTGTA | + |
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Preference number: 1 (lower is better) Translates to: CLTIQPIHWLQPMSQ*IIVHLAISSCKQTV Trigger: TACAGTTTGTTTGCAAGAAGAAATGGCCAGATGTACGATTATTCACTGACTCATGGGCTGTAGCCAATGGATTGGCTGGATGGTCAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CCA 90 bp | AAGGGTTTTATTGTAGATAGGAGGGAGAGCTCAGCCAGAGACATCTaGATGAGTCCAGAGCAGAGAGAAAGTAGTAGATTAAACATGACC | + |
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Preference number: 1 (lower is better) Translates to: KGFIVDRRESSARDI*MSPEQRESSRLNMT Trigger: GGTCATGTTTAATCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTCCCTCCTATCTACAATAAAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR GCA 90 bp | CCTATGTTCAAGCTGTGTATAGTGTGGCACACAGTCTCCTTTTATTaGTTGCAGATCAAGATGCAGAAATCTCAGCTCCTTCTCCAACAT | + |
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Preference number: 1 (lower is better) Translates to: PMFKLCIVWHTVSFY*LQIKMQKSQLLLQH Trigger: ATGTTGGAGAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTATACACAGCTTGAACATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCACCAGGTTGCTGGCTGGTCACCTCGAGGAATGATGCCATATCTGGGGCTGCCTTAAGAGGAGGCTaGTGGAGAGTGGGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPPGCWLVTSRNDAISGAALRGG*WRVGEE Trigger: TTCCTCTCCCACTCTCCACCAGCCTCCTCTTAAGGC...AGCCCCAGATATGGCATCATTCCTCGAGGTGACCAGCCAGCAACCTGGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CAA 90 bp | TTGCTGAGCCCAAGCATAACCTCCATCCCGACCACCATGGCCACTTaGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLSPSITSIPTTMAT*FMCPLSNDRDGWGE Trigger: CTCTCCCCAGCCATCCCTGTCATTGCTCAATGGGCACATGAACAAAGTGGCCATGGTGGTCGGGATGGAGGTTATGCTTGGGCTCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR CAA 90 bp | CAAGGACCCTGTGAGACTGGGCTGGAGCACCTGTCAGTAACTGTTTaGGTCCTGTGGCAGCAGGGGTCTCCTACCAAAGTCCAGGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: QGPCETGLEHLSVTV*VLWQQGSPTKVQVD Trigger: ATCTACCTGGACTTTGGTAGGAGACCCCTGCTGCCACAGGACCAAAACAGTTACTGACAGGTGCTCCAGCCCAGTCTCACAGGGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCACAAGGGGGAGTTTCCTaGTGTGCTGAGGAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VPERGCNAAAVHFWVVPAQGGVS*CAEEKQ Trigger: TTGCTTCTCCTCAGCACATCAGGAAACTCCCCCTTG...TGCAGGCACCACCCAGAAGTGGACAGCTGCAGCATTACAACCCCTTTCTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR CCA 90 bp | GTAAGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTATGTGGAAGTTTGTCACTGTaGGGACAGGCTTTGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VRTEGCWENLEARSALVCGSLSL*GQALRS Trigger: AGACCTCAAAGCCTGTCCCCACAGTGACAAACTTCC...ACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACCAGGTTGCTGGCTGGTCACCTCGAGGAATGATGCCATATCTGGGGCTAAATTTACTGAGCAGTaGGAGCAAAGCACTGATCAC | + |
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Preference number: 2 (lower is better) Translates to: LPPGCWLVTSRNDAISGAKFTEQ*EQSTDH Trigger: GTGATCAGTGCTTTGCTCTCACTGCTCAGTAAATTT...AGCCCCAGATATGGCATCATTCCTCGAGGTGACCAGCCAGCAACCTGGTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTCTTGGATGGGGGTCATATTCCTCTCTGGTTTCAGGCACCAGATGTACAGAGGCTGGTGGAGAGTaGGAGAGGAAGAGAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: ESLGWGSYSSLVSGTRCTEAGGE*ERKRSK Trigger: CTTACTTCTCTTCCTCTCCCACTCTCCACCAGCCTC...TGTACATCTGGTGCCTGAAACCAGAGAGGAATATGACCCCCATCCAAGAGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACACCCCTAGGCAAGGAGAATTTACTGAGCAGTGAGAGCAAGGCACTGACCCAAGTGGAAATTTACTaGGCAGTGAGAGCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TTPLGKENLLSSESKALTQVEIY*AVRAKH Trigger: GTGCTTTGCTCTCACTGCTCAGTAAATTTCCACTTG...GGTCAGTGCCTTGCTCTCACTGCTCAGTAAATTCTCCTTGCCTAGGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCACCAGGTTGCTGGCTGGTCACCTCGAGGAATGATGCCATATCTGGGGCTACTCATGTGTTTGAATaGTTGCCTCATAAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LPPGCWLVTSRNDAISGATHVFE*LPHKKW Trigger: CCATTTCTTATGAGGCAAGCATTCAAACACATGAGT...AGCCCCAGATATGGCATCATTCCTCGAGGTGACCAGCCAGCAACCTGGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCACCTGATACCAGGACTTaGCTTCATCTAAATTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VPERGCNAAAVHFWVVPAPDTRT*LHLNCY Trigger: GTAACAATTTAGATGAAGGCAAGTCCTGGTATCAGG...TGCAGGCACCACCCAGAAGTGGACAGCTGCAGCATTACAACCCCTTTCTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR GCA 90 bp | CTGACCACACCCCTAGGCAAGGAGAATTTACTGAGCAGTGAGAGCAAGGCACTGTTCACTATGGTAGGTTaGAGAAGCCTGCAGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: LTTPLGKENLLSSESKALFTMVG*RSLQEQ Trigger: TTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAA...CAGTGCCTTGCTCTCACTGCTCAGTAAATTCTCCTTGCCTAGGGGTGTGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTCTGATTGGGGTCAGGGTATaGCAGGTAAGGACTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRESAHVQRENKEDQNPLIGVRV*QVRTEG Trigger: TCCCTCAGTCCTTACCTGGCATACCCTGACCCCAAT...CAGAGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCAGCAATTGTTAACCTGTaGTGGTTTGAATTGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VPERGCNAAAVHFWVVPAAIVNL*WFELVW Trigger: CCAAACCAATTCAAACCACCACAGGTTAACAATTGC...TGCAGGCACCACCCAGAAGTGGACAGCTGCAGCATTACAACCCCTTTCTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTTTACTGAGCAGTGAGAGCAAGGCACTGACCACACCCCTAGACAAGTGGGGTCATATTCCTCTCTaGTTTCAGGCACCAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: ESLLSSESKALTTPLDKWGHIPL*FQAPDV Trigger: TACATCTGGTGCCTGAAACCAGAGAGGAATATGACC...CCACTTGTCTAGGGGTGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATATGGAAAGCTCAGGATTaGGGTCAGGGTATGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LFSVEFTDPGKKVREVTIWKAQD*GQGMPG Trigger: ACCTGGCATACCCTGACCCCAATCCTGAGCTTTCCA...TATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCTGCAGAGGGCAATTGTTAACCTGTGGTGGTTTGAATTGGTTTGGCCCGCTTGCAGATCAAGATaGAGAAATCTCAGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RELQRAIVNLWWFELVWPACRSR*RNLSSF Trigger: GAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGC...GGGCCAAACCAATTCAAACCACCACAGGTTAACAATTGCCCTCTGCAGCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGGTGCTTGCAGATCAAGATaGAGAAATCTCAGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FSVEFTDPGKKVREVTIGACRSR*RNLSSF Trigger: GAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGC...ACCTATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAAAGGGGAAGAGAAAGTaGCCATGTGCAGAGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LFSVEFTDPGKKVREVTIKGKRK*PCAERE Trigger: TTCTCTCTCTGCACATGGGCACTTTCTCTTCCCCTT...TATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTTCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGAGAGCTTCATGTCTGCTTAGATaGTGCCATGCTTCCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: LPSSKLLLTLKEGLHQRASCLLR*CHASHY Trigger: ATAGTGGGAAGCATGGCAGCATCTAAGCAGACATGA...AGCTCTCTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAGGCAAAAAGAAATTTACTGAGCAGTTAGAGCAAGGCACTGACCACATCTGTGGTGGTTTGAATTaGTTTGGCCCTCATAGACTC | + |
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Preference number: 2 (lower is better) Translates to: PLGKKKFTEQLEQGTDHICGGLN*FGPHRL Trigger: GAGTCTATGAGGGCCAAACCAATTCAAACCACCACA...GATGTGGTCAGTGCCTTGCTCTAACTGCTCAGTAAATTTCTTTTTGCCTAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGGAGTTCACTATGGTAGGTTGCAGAAGCCTGCAGGAACAAGTGATCCATATTGTTAACCTGTGGTaGTTTGAATTGGTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GLEFTMVGCRSLQEQVIHIVNLW*FELVWP Trigger: GGGCCAAACCAATTCAAACCACCACAGGTTAACAAT...ATGGATCACTTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAACTCCAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | CATATTCCTCTCTGGTTTCAGGCACCAGATGTACAAAGTGAGGACAAAACTGTTGCTGAGTCTCTTGGATaGGGGTCATATTCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HIPLWFQAPDVQSEDKTVAESLG*GSYSSL Trigger: CAGAGAGGAATATGACCCCCATCCAAGAGACTCAGC...AACAGTTTTGTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGGAGTTCACTATGGTAGGTTGCAGAAGCCTGCAGGAACAAGTGATCCATACCTTTATCTTCTTATaGTACGGAAGACAACAACGG | + |
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Preference number: 2 (lower is better) Translates to: GLEFTMVGCRSLQEQVIHTFIFL*YGRQQR Trigger: CCGTTGTTGTCTTCCGTATCATAAGAAGATAAAGGT...ATGGATCACTTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAACTCCAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146692.8 |
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| 3UTR CAA 90 bp | TCCTATGTTCAAGCTGTGTATAGTGTGGCACACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCAGAAATCTCAGCTCCTTCTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: SYVQAVYSVAHSLLL*LADQDAEISAPSPT Trigger: TGTTGGAGAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTATACACAGCTTGAACATAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCTGCAGAGGGCAATTGTTAACCTGTGGTGGTTTGAATTGGTTTGGCCCTCTCCTTTTATTGCTTaGAGATCAAGATGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: RELQRAIVNLWWFELVWPSPFIA*RSRCRN Trigger: ATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGA...GGGCCAAACCAATTCAAACCACCACAGGTTAACAATTGCCCTCTGCAGCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | AAATTTACTGAGCAGTTAGAGCAAGGCACTGACCACATCCCTAGGCAAGTGGAAACAGTCTCCTTTTATTaGTTGCAGATCAAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: KFTEQLEQGTDHIPRQVETVSFY*LQIKMQ Trigger: CTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGT...TTCCACTTGCCTAGGGATGTGGTCAGTGCCTTGCTCTAACTGCTCAGTAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR CAA 90 bp | ATGTTCAAGCTGTGTATAGTGTGGCACACAGTCTCCTTTTATTGCTaGCAGATCAAGATGCAGAAATCTCAGCTCCTTCTCCAACATCAT | + |
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Preference number: 2 (lower is better) Translates to: MFKLCIVWHTVSFYC*QIKMQKSQLLLQHH Trigger: ATGATGTTGGAGAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTATACACAGCTTGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | AAATTTACTGAGCAGTTAGAGCAAGGCACTGACCACATCCCTAGGCAAGTGGAAACTCATGTGTTTGAATaGTTGCCTCATAAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: KFTEQLEQGTDHIPRQVETHVFE*LPHKKW Trigger: CCATTTCTTATGAGGCAAGCATTCAAACACATGAGT...TTCCACTTGCCTAGGGATGTGGTCAGTGCCTTGCTCTAACTGCTCAGTAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAACTGTAATACCATGTGTACTGCCCGAAGTTCTGCCCACTGTGAAGATTATTGTTAACCTGTGGTaGTTTGAATTGGTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KQTVIPCVLPEVLPTVKIIVNLW*FELVWP Trigger: GGGCCAAACCAATTCAAACCACCACAGGTTAACAAT...AATCTTCACAGTGGGCAGAACTTCGGGCAGTACACATGGTATTACAGTTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
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| 3UTR-3UTR CCA 90 bp | CATATTCCTCTCTGGTTTCAGGCACCAGATGTACAAAGTGAGGACAAAACTGTTAAACTGTTCCATTTCTaGTTAGGGGGAAGGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: HIPLWFQAPDVQSEDKTVKLFHF*LGGRVL Trigger: TAAAACCCTTCCCCCTAACCAGAAATGGAACAGTTT...AACAGTTTTGTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGAACAAGGCACTGATCACACCCCTAGGCAAAAAGAAATTTACTGAGCAGTCTCCTTTTATTGCTTaGAGATCAAGATGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: IENKALITPLGKKKFTEQSPFIA*RSRCRN Trigger: ATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGA...CTGCTCAGTAAATTTCTTTTTGCCTAGGGGTGTGATCAGTGCCTTGTTCTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
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| 3UTR CCA 72 bp | AAGAGCCTCTGGGGGAATGGCAGCCCAGTCCCTAGGTaGAAAGCTCAGGATTGGGGTCAGGGTATGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: KSLWGNGSPVPR*KAQDWGQGMPG Trigger: ACCTGGCATACCCTGACCCCAATCCTGAGCTTTCCACCTAGGGACTGGGCTGCCATTCCCCCAGAGGCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
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| 3UTR GCA 72 bp | ACCTCCATCCCGACCACCATGGCCACTTTGTTCATGTaGCCATTGAGCAATGACAGGGATGGCTGGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSIPTTMATLFM*PLSNDRDGWGE Trigger: CTCTCCCCAGCCATCCCTGTCATTGCTCAATGGGCACATGAACAAAGTGGCCATGGTGGTCGGGATGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR GCA 72 bp | ATTGGGGTCAGGGTATGCCAGGTAAGGACTGAGGGATaGTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IGVRVCQVRTEG*WENLEARSALV Trigger: TACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCTTACCTGGCATACCCTGACCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR GCA 72 bp | TCCCTAGGTGGAAAGCTCAGGATTGGGGTCAGGGTATaGCAGGTAAGGACTGAGGGATGCTGGGAGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLGGKLRIGVRV*QVRTEGCWENL Trigger: CAGGTTCTCCCAGCATCCCTCAGTCCTTACCTGGCATACCCTGACCCCAATCCTGAGCTTTCCACCTAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR TCA 72 bp | GGCACTGACCACATCCCTAGGCAAGTGGAAATTTACTaGGTAGTGAGCACAAGGCACAGCACTGACCGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GTDHIPRQVEIY*VVSTRHSTDRT Trigger: GGTGCGGTCAGTGCTGTGCCTTGTGCTCACTACTCAGTAAATTTCCACTTGCCTAGGGATGTGGTCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CCA 72 bp | ACCTCGAGGAATGATGCCATATCTGGGGCTCAGTGTTaGTTTCGGCTGTTGGCAGATCTGGCAATCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSRNDAISGAQC*FRLLADLAISS Trigger: GCTGCTGATTGCCAGATCTGCCAACAGCCGAAACCAACACTGAGCCCCAGATATGGCATCATTCCTCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR CCA 72 bp | AAGTGGTCCAATGTAGTCAACCTGCCACCAGGTTGCTaGCTGGTCACCTCGAGGAATGATGCCATATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KWSNVVNLPPGC*LVTSRNDAISG Trigger: CCCAGATATGGCATCATTCCTCGAGGTGACCAGCCAGCAACCTGGTGGCAGGTTGACTACATTGGACCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR TCA 72 bp | AGCACTGATCACACCCCTAGGCAAGGGGGAGTTTCCTaGTGTGCTGAGGAGAAGCAAATGGTTAGCGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: STDHTPRQGGVS*CAEEKQMVSAS Trigger: ACTTGCGCTAACCATTTGCTTCTCCTCAGCACATCAGGAAACTCCCCCTTGCCTAGGGGTGTGATCAGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ATCACACCCCTAGGCAAGGGAAAGTTTACTGAGCAGTaGGAGCAAGGCACTGACCACACCCCTAGACAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITPLGKGKFTEQ*EQGTDHTPRQV Trigger: CACTTGTCTAGGGGTGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAACTTTCCCTTGCCTAGGGGTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ATCACACCCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGAGCAAGGCACTGACCACACCCCTAGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITPLGKWKFTEQ*EQGTDHTPRQV Trigger: CACTTGCCTAGGGGTGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAATTTCCACTTGCCTAGGGGTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR CCA 72 bp | AGCATGGTTTGGCTAGGAGAGGCTGAGTCTCTTGGATaGGGGTCATATTCCTCTCTGGTTTCAGGCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SMVWLGEAESLG*GSYSSLVSGTR Trigger: TCTGGTGCCTGAAACCAGAGAGGAATATGACCCCCATCCAAGAGACTCAGCCTCTCCTAGCCAAACCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CCA 72 bp | GACCAAAATCCTCTGGATTATATAGGGAAGAGCCTCTaGGGGAATGGCAGCCCAGTCCCTAGGTGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DQNPLDYIGKSL*GNGSPVPRWKA Trigger: AGCTTTCCACCTAGGGACTGGGCTGCCATTCCCCCAGAGGCTCTTCCCTATATAATCCAGAGGATTTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGTTTACTGAGCAGTGAGAGCAAGGCACTGACCACACCCCTAGACAAGTGGTGGATCTCTGTGATTTaGAGGCCAGCCTGGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ESLLSSESKALTTPLDKWWISVI*RPAWSS Trigger: TGAAGACCAGGCTGGCCTCAAAATCACAGAGATCCA...CCACTTGTCTAGGGGTGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ACCACACCCTTAGGTAAGTGGAAATTTACTGAGCAGTaGGAGCAAGGCACTGATCACACCCCTAGGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TTPLGKWKFTEQ*EQGTDHTPRQG Trigger: CCCTTGCCTAGGGGTGTGATCAGTGCCTTGCTCTCACTGCTCAGTAAATTTCCACTTACCTAAGGGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ATCACACCCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGAGCAAGGCACTGATCACACCCCTAGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITPLGKWKFTEQ*EQGTDHTPRQV Trigger: CACTTGCCTAGGGGTGTGATCAGTGCCTTGCTCTCACTGCTCAGTAAATTTCCACTTGCCTAGGGGTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCATGCATACCTTAGGAAGTCGTCAAACCAACAGCATGGTTTGGCTAGGAGAGAGGCTGAGTCTCTaGGATGGGGGTCATATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSMHTLGSRQTNSMVWLGERLSL*DGGHIP Trigger: AGGAATATGACCCCCATCCAAGAGACTCAGCCTCTC...TCCTAGCCAAACCATGCTGTTGGTTTGACGACTTCCTAAGGTATGCATGGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | GTTAGCGCAAGTAGAGGGGAGAAGCAGCTGAAGAGGTaGATTCCAGGTTTGGAGTTCACTATGGTAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSASRGEKQLKR*IPGLEFTMVGC Trigger: GCAACCTACCATAGTGAACTCCAAACCTGGAATTCACCTCTTCAGCTGCTTCTCCCCTCTACTTGCGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ACCACACTCCTAGGCAAGTGGAAATTTACTGAGCAGTaGGAGCAAGGCACTGACCACATCCCTAGGCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TTLLGKWKFTEQ*EQGTDHIPRHV Trigger: TACATGCCTAGGGATGTGGTCAGTGCCTTGCTCTCACTGCTCAGTAAATTTCCACTTGCCTAGGAGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR TCA 72 bp | CTGGTCTTGGCTTCTGCTTGGGGACACATAAATATTTaGGGTCTCTGTCCAACTGACCCCACTCCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLASAWGHINI*GLCPTDPTPHL Trigger: CAGATGAGGAGTGGGGTCAGTTGGACAGAGACCTCAAATATTTATGTGTCCCCAAGCAGAAGCCAAGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR CCA 72 bp | AGGAGGTATGACCTTGTTGGAGGAAGTTTGTCACTGTaGGGACAGGCTTTGAGGTCTCCTATGTTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRYDLVGGSLSL*GQALRSPMFKL Trigger: CAGCTTGAACATAGGAGACCTCAAAGCCTGTCCCCACAGTGACAAACTTCCTCCAACAAGGTCATACCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CCA 72 bp | AGTAAGAACAAAACGCTGTCCTTTCCACGAAGGAAGTaGTCCAATGTAGTCAACCTGCCACCAGGTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKNKTLSFPRRK*SNVVNLPPGCW Trigger: CCAGCAACCTGGTGGCAGGTTGACTACATTGGACCACTTCCTTCGTGGAAAGGACAGCGTTTTGTTCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTGGATCTCTGTGATTTaGAGGCCAGCCTGGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGKRKCPCAEREQGRPKSWISVI*RPAWSS Trigger: TGAAGACCAGGCTGGCCTCAAAATCACAGAGATCCA...GGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR TCA 72 bp | GGGGAAGGGAAGTCAGTGAGGTGGAGACGTGTAAGGTaGGGTCATGTTCTTCAGTATGTTAATAGGAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GEGKSVRWRRVR*GHVLQYVNRNH Trigger: GTGGTTCCTATTAACATACTGAAGAACATGACCTCACCTTACACGTCTCCACCTCACTGACTTCCCTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | AGCAAATGGTTAGCGCAAGTAGAGGGGAGAAGCAGCTaGAGAGGTGAATTCCAGGTTTGGAGTTCACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SKWLAQVEGRSS*RGEFQVWSSLW Trigger: CCATAGTGAACTCCAAACCTGGAATTCACCTCTTCAGCTGCTTCTCCCCTCTACTTGCGCTAACCATTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CCA 72 bp | AGGCTGAGTCTCTTGGATGGGGGTCATATTCCTCTCTaGTTTCAGGCACCAGATGTACAAAGTGAGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLSLLDGGHIPL*FQAPDVQSEDK Trigger: TTTGTCCTCACTTTGTACATCTGGTGCCTGAAACCAGAGAGGAATATGACCCCCATCCAAGAGACTCAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CCA 72 bp | AGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTaGTATGTAAAATATGCAACTAAGCAACTTGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RDAGRTWRPGLL*YVKYATKQLVQ Trigger: CTGGACAAGTTGCTTAGTTGCATATTTTACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR GCA 72 bp | CTTTCTCACCAATTTTCCAATTGTGATCTTTCCAAGTaGCTGACCATCCAGCCAATCCATTGGCTACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHQFSNCDLSK*LTIQPIHWLQP Trigger: GGGCTGTAGCCAATGGATTGGCTGGATGGTCAGGCACTTGGAAAGATCACAATTGGAAAATTGGTGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTCTTGGATGGGGGTCATATTCCTCTCTGGTTTCAGGCACCAGATGTACAGTCTCCTTTTATTGCTaGCAGATCAAGATGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ESLGWGSYSSLVSGTRCTVSFYC*QIKMQK Trigger: TTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGAC...TGTACATCTGGTGCCTGAAACCAGAGAGGAATATGACCCCCATCCAAGAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | CTTCCCCAGATGTCTTTCTCACCAATTTTCCAATTGTaGTCTTTCCAAGTGCCTGACCATCCAGCCAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPQMSFSPIFQL*SFQVPDHPANP Trigger: TGGATTGGCTGGATGGTCAGGCACTTGGAAAGATCACAATTGGAAAATTGGTGAGAAAGACATCTGGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR TCA 72 bp | TTGGGGACACATAAATATTTGAGGTCTCTGTCCAACTaGCCCCACTCCTCATCTGGAAATCATAGGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGTHKYLRSLSN*PHSSSGNHRRA Trigger: AGCTCTCCTATGATTTCCAGATGAGGAGTGGGGTCAGTTGGACAGAGACCTCAAATATTTATGTGTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| 3UTR CCA 72 bp | ATTGTAGATAGGAGGGAGAGCTCAGCCAGAGACATCTaGATGAGTCCAGAGCAGAGAGAAAGTAGTAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: IVDRRESSARDI*MSPEQRESSRL Trigger: TAATCTACTACTTTCTCTCTGCTCTGGACTCATCCAGATGTCTCTGGCTGAGCTCTCCCTCCTATCTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | ATCCAGCCAATCCATTGGCTACAGCCCATGAGTCAGTaGATAATCGTACATCTGGCCATTTCTTCTTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IQPIHWLQPMSQ*IIVHLAISSCK Trigger: TTTGCAAGAAGAAATGGCCAGATGTACGATTATTCACTGACTCATGGGCTGTAGCCAATGGATTGGCTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| 3UTR GCA 72 bp | GGCACACAGTCTCCTTTTATTGCTTGCAGATCAAGATaGAGAAATCTCAGCTCCTTCTCCAACATCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTQSPFIACRSR*RNLSSFSNIMS Trigger: AGACATGATGTTGGAGAAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR GCA 72 bp | AAGCTGTGTATAGTGTGGCACACAGTCTCCTTTTATTaGTTGCAGATCAAGATGCAGAAATCTCAGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLCIVWHTVSFY*LQIKMQKSQLL Trigger: AAGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTATACACAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR TCA 72 bp | CACAGTGGACCATTCATCCTGAGTTTCTTTTGGACCTaGTACCAGGACTTGCCTTCATCTAAATTGTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: HSGPFILSFFWT*YQDLPSSKLLL Trigger: AAGTAACAATTTAGATGAAGGCAAGTCCTGGTATCAGGTCCAAAAGAAACTCAGGATGAATGGTCCACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGATCAAGATGCAGAAATCTCAGCTCCTTCTCCAACATCATGTCTGCTTAGATGTCTCCTTTTATTGCTaGCAGATCAAGATGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QIKMQKSQLLLQHHVCLDVSFYC*QIKMQK Trigger: TTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGAC...ATCTAAGCAGACATGATGTTGGAGAAGGAGCTGAGATTTCTGCATCTTGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CAA 72 bp | TGTAGCCAGGTCGGACTTGGTGAGCGGAAGCCCATGTaGCTGAGCCCAAGCATAACCTCCATCCCGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSQVGLGERKPM*LSPSITSIPTT Trigger: GGTGGTCGGGATGGAGGTTATGCTTGGGCTCAGCAACATGGGCTTCCGCTCACCAAGTCCGACCTGGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR TCA 90 bp | GTAAGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTATGTCCGGTCACTGGTGGCTaGGCAGTCGGCCACCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRTEGCWENLEARSALVCPVTGG*AVGHHF Trigger: GAAATGGTGGCCGACTGCTCAGCCACCAGTGACCGG...ACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGAGGAGCTGGCTGTCTCCCTGCTGTCCAGGCTGTGGGACCATCTGGTGTCGGCCACCATTTCCTaGTCTTTATCACAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FWEELAVSLLSRLWDHLVSATIS*SLSQVE Trigger: CTCCACCTGTGATAAAGATCAGGAAATGGTGGCCGA...CACCAGATGGTCCCACAGCCTGGACAGCAGGGAGACAGCCAGCTCCTCCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR TCA 90 bp | ATCATAGGAGAGCTGGTCACGGTGGGAGAGCAAGGCACTGACCACACTCCTAGGGTGCCCATTGAGCAATaGCAGGGATGGCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIGELVTVGEQGTDHTPRVPIEQ*QGWLGR Trigger: TCTCCCCAGCCATCCCTGTCATTGCTCAATGGGCAC...CCTAGGAGTGTGGTCAGTGCCTTGCTCTCCCACCGTGACCAGCTCTCCTATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | ATCATAGGAGAGCTGGTCACGGTGGGAGAGCAAGGCACTGACCACACTCCTAGGCACCAGGTTGCTGGCTaGTCACCTCGAGGAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: IIGELVTVGEQGTDHTPRHQVAG*SPRGMM Trigger: CATCATTCCTCGAGGTGACCAGCCAGCAACCTGGTG...CCTAGGAGTGTGGTCAGTGCCTTGCTCTCCCACCGTGACCAGCTCTCCTATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAATCATAGGAGAGCTGGTCACGGTGGGAGAGCAAGGCACTGACCACACTAATGACAGGGATGGCTaGGGAGAGAGGCTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEIIGELVTVGEQGTDHTNDRDG*GERLTV Trigger: GACAGTCAGCCTCTCTCCCCAGCCATCCCTGTCATT...AGTGTGGTCAGTGCCTTGCTCTCCCACCGTGACCAGCTCTCCTATGATTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| 3UTR CAA 72 bp | TGTGAGACTGGGCTGGAGCACCTGTCAGTAACTGTTTaGGTCCTGTGGCAGCAGGGGTCTCCTACCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CETGLEHLSVTV*VLWQQGSPTKV Trigger: GACTTTGGTAGGAGACCCCTGCTGCCACAGGACCAAAACAGTTACTGACAGGTGCTCCAGCCCAGTCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000171066.2 |
||
| CDS-3UTR TCA 90 bp | ACAACGGACACAATTAGCACACTCAAAGGTGATAACAGTAGGAACAGCCGGTTTCCGGTCACTGGTGGCTaGGCAGTCGGCCACCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTDTISTLKGDNSRNSRFPVTGG*AVGHHF Trigger: GAAATGGTGGCCGACTGCTCAGCCACCAGTGACCGG...AAACCGGCTGTTCCTACTGTTATCACCTTTGAGTGTGCTAATTGTGTCCGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146692.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAATCATAGGAGAGCTGGTCACGGTGGGAGAGCAAGGCACTGACCACACTGCCACTTTGTTCATGTaGCCATTGAGCAATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEIIGELVTVGEQGTDHTATLFM*PLSNDR Trigger: CCTGTCATTGCTCAATGGGCACATGAACAAAGTGGC...AGTGTGGTCAGTGCCTTGCTCTCCCACCGTGACCAGCTCTCCTATGATTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTAAGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTAGGAACAGCCGGTTTCTaGGATTTGAAACAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRTEGCWENLEARSALVGTAGF*DLKQMN Trigger: GTTCATCTGTTTCAAATCCCAGAAACCGGCTGTTCC...TACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCTTACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTATGTAAAATATCAGCCCATGAGTCAGTaGATAATCGTACATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRDAGRTWRPGLLWYVKYQPMSQ*IIVHLA Trigger: GGCCAGATGTACGATTATTCACTGACTCATGGGCTG...ATATTTTACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGGTTCTGGGGCTCAGTGTTaGTTTCGGCTGTTGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVEFTDPGKKVREVTIGSGAQC*FRLLAD Trigger: ATCTGCCAACAGCCGAAACCAACACTGAGCCCCAGA...ACCTATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCACGATTCTGGAAATTTTaGGTCATAGTAGTAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VPERGCNAAAVHFWVVPARFWKF*VIVVKT Trigger: GGTCTTTACTACTATGACCCAAAATTTCCAGAATCG...TGCAGGCACCACCCAGAAGTGGACAGCTGCAGCATTACAACCCCTTTCTGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR CCA 90 bp | TTGTTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGTGGAGTTGCATTCCTaGAGGACAGGGATTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSVEFTDPGKKVREVTIVELHS*RTGIPW Trigger: CCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCAC...TATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGGTATCCAGCCAATCCATTaGCTACAGCCCATGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVEFTDPGKKVREVTIGIQPIH*LQPMSQ Trigger: CTGACTCATGGGCTGTAGCCAATGGATTGGCTGGAT...ACCTATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| 3UTR CAA 72 bp | CTTGTTGGAGGAAGTTTGTCACTGTGGGGACAGGCTTaGAGGTCTCCTATGTTCAAGCTGTGTATAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVGGSLSLWGQA*RSPMFKLCIVW Trigger: CCACACTATACACAGCTTGAACATAGGAGACCTCAAAGCCTGTCCCCACAGTGACAAACTTCCTCCAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR TCA 90 bp | CCATCCATGCATACCTTAGGAAGTCGTCAAACCAACAGCATGGTTTGGCTAGGAGTGAATGTTCCTGGGTaGCACTTCTCACATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSMHTLGSRQTNSMVWLGVNVPG*HFSHCP Trigger: AGGACAATGTGAGAAGTGTCACCCAGGAACATTCAC...TCCTAGCCAAACCATGCTGTTGGTTTGACGACTTCCTAAGGTATGCATGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCACACCCCTAGGCAAGGAGAATTTACTGAGCAGTGAGAGCAAGGCACTGCTTGACAAATGTACCTaGAGAACAGTTCTTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTTPLGKENLLSSESKALLDKCT*RTVLAT Trigger: TGTTGCAAGAACTGTTCTGCAGGTACATTTGTCAAG...CAGTGCCTTGCTCTCACTGCTCAGTAAATTCTCCTTGCCTAGGGGTGTGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGGACTGAGGGATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGGTATGTCTGGCCATTTCTTCTTaGAAACAAACTGTAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: VRTEGCWENLEARSALVCLAISS*KQTVIP Trigger: TGGTATTACAGTTTGTTTGCAAGAAGAAATGGCCAG...ACATACCAAAGCAGACCTGGCCTCCAGGTTCTCCCAGCATCCCTCAGTCCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR TCA 90 bp | TATGCAACTAAGCAACTTGTCCAGGGCTCTGAAACCAAACATTCCAGCCTTCTGGTGAATGTTCCTGGGTaGCACTTCTCACATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YATKQLVQGSETKHSSLLVNVPG*HFSHCP Trigger: AGGACAATGTGAGAAGTGTCACCCAGGAACATTCAC...CAGAAGGCTGGAATGTTTGGTTTCAGAGCCCTGGACAAGTTGCTTAGTTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR TCA 90 bp | AGGGGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTTATCCACTTGATTATTaGACTCCTCCTCGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRESAHVQRENKEDQNPYPLDY*TPPRLK Trigger: CTTCAGCCGAGGAGGAGTTCAATAATCAAGTGGATA...AGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR GCA 90 bp | TATGCAACTAAGCAACTTGTCCAGGGCTCTGAAACCAAACATTCCAGCCTTCTGTGTGATCTTTCCAAGTaGCTGACCATCCAGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YATKQLVQGSETKHSSLLCDLSK*LTIQPI Trigger: GATTGGCTGGATGGTCAGGCACTTGGAAAGATCACA...CAGAAGGCTGGAATGTTTGGTTTCAGAGCCCTGGACAAGTTGCTTAGTTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCCTAGGCAAGGAGAATTTACTGAGCAGTGAGAGCAAGGCACTGACCCGATTCTGGAAATTTTaGGTCATAGTAGTAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TTPLGKENLLSSESKALTRFWKF*VIVVKT Trigger: GGTCTTTACTACTATGACCCAAAATTTCCAGAATCG...GGTCAGTGCCTTGCTCTCACTGCTCAGTAAATTCTCCTTGCCTAGGGGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTCAATTATCTTTCTCTGTaGATGTTCCTGGGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GEEKVPMCRERTRKTKILNYLSL*MFLGDT Trigger: AGTGTCACCCAGGAACATTCACAGAGAAAGATAATT...GAGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGGTATAGCAAATTTTACCTaGAAGGGCAGATTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVEFTDPGKKVREVTIGIANFT*KGRFSS Trigger: GCTGCTGAATCTGCCCTTGCAGGTAAAATTTGCTAT...ACCTATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR GCA 90 bp | CCATCCATGCATACCTTAGGAAGTCGTCAAACCAACAGCATGGTTTGGCTAGGAATAGCAAATTTTACCTaGAAGGGCAGATTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSMHTLGSRQTNSMVWLGIANFT*KGRFSS Trigger: GCTGCTGAATCTGCCCTTGCAGGTAAAATTTGCTAT...TCCTAGCCAAACCATGCTGTTGGTTTGACGACTTCCTAAGGTATGCATGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTCATCCTTTGCCCATTTaGAGAGATCTATCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RGRESAHVQRENKEDQNPHPLPI*RDLSTY Trigger: GTATGTGGATAGATCTCTCCAAATGGGCAAAGGATG...AGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTGGAGTTCACTATGGTAGGTTGCAGAAGCCTGCAGGAACAAGTGATCCATAATTATCTTTCTCTGTaGATGTTCCTGGGTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GLEFTMVGCRSLQEQVIHNYLSL*MFLGDT Trigger: AGTGTCACCCAGGAACATTCACAGAGAAAGATAATT...ATGGATCACTTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAACTCCAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CAA 72 bp | CAAGCTGTGTATAGTGTGGCACACAGTCTCCTTTTATaGCTTGCAGATCAAGATGCAGAAATCTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVYSVAHSLLL*LADQDAEISAP Trigger: AGGAGCTGAGATTTCTGCATCTTGATCTGCAAGCAATAAAAGGAGACTGTGTGCCACACTATACACAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATAGGTGATCTTTATCACAGGTaGAGCAAAGTATACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVEFTDPGKKVREVTIGDLYHR*SKVYKH Trigger: ATGCTTGTATACTTTGCTCCACCTGTGATAAAGATC...ACCTATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR GCA 90 bp | TTCTTGCAAACAAACTGTAATACCATGTGTACTGCCCGAAGTTCTGCCCACTGTCTTGACAAATGTACCTaGAGAACAGTTCTTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FLQTNCNTMCTARSSAHCLDKCT*RTVLAT Trigger: TGTTGCAAGAACTGTTCTGCAGGTACATTTGTCAAG...ACAGTGGGCAGAACTTCGGGCAGTACACATGGTATTACAGTTTGTTTGCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR CCA 90 bp | CCCCTAGGCAAAAAGAAATTTACTGAGCAGTTAGAGCAAGGCACTGACCACATCGATCTTTATCACAGGTaGAGCAAAGTATACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLGKKKFTEQLEQGTDHIDLYHR*SKVYKH Trigger: ATGCTTGTATACTTTGCTCCACCTGTGATAAAGATC...GATGTGGTCAGTGCCTTGCTCTAACTGCTCAGTAAATTTCTTTTTGCCTAGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| 3UTR CAA 72 bp | GAGTCAGTGAATAATCGTACATCTGGCCATTTCTTCTaGCAAACAAACTGTAATACCATGTGTACTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ESVNNRTSGHFF*QTNCNTMCTAR Trigger: TCGGGCAGTACACATGGTATTACAGTTTGTTTGCAAGAAGAAATGGCCAGATGTACGATTATTCACTGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGGGAGGAGCTGGCTGTCTCCCTGCTGTCCAGGCTGTGGGACCATCTGGCAACCTGCCACCAGGTaGCTGGCTGGTCACCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISGRSWLSPCCPGCGTIWQPATR*LAGHLE Trigger: CTCGAGGTGACCAGCCAGCAACCTGGTGGCAGGTTG...CCAGATGGTCCCACAGCCTGGACAGCAGGGAGACAGCCAGCTCCTCCCAGAAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGAGGAGCTGGCTGTCTCCCTGCTGTCCAGGCTGTGGGACCATCTGGTGTGTTGGTTTCGGCTGTaGGCAGATCTGGCAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FWEELAVSLLSRLWDHLVCWFRL*ADLAIS Trigger: GCTGATTGCCAGATCTGCCAACAGCCGAAACCAACA...CACCAGATGGTCCCACAGCCTGGACAGCAGGGAGACAGCCAGCTCCTCCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS CCA 90 bp | GAAACAGATGAACTGCACACAGTGTTAGCTGTGGAGTTGCATTCCTaGAGGACAGGGATTCCTTGGGGACACTTGGTACATGGGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETDELHTVLAVELHS*RTGIPWGHLVHGRH Trigger: GTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTCATCTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CCA 90 bp | TCCTTGGGGACACTTGGTACATGGGCGGCACGATTCTGGAAATTTTaGGTCATAGTAGTAAAGACCTGTTCGGCACTGGCATTTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGTLGTWAARFWKF*VIVVKTCSALAFPV Trigger: GACCGGAAATGCCAGTGCCGAACAGGTCTTTACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CCA 90 bp | CTGTGGAGTTGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTTaGTACATGGGCGGCACGATTCTGGAAATTTTGGGTCATAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LWSCIPGGQGFLGDT*YMGGTILEILGHSS Trigger: ACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTCACCACCATGGCCACTTaGTTCATGTGCCCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEEKVPMCRERTRKTKILTTMAT*FMCPLS Trigger: GCTCAATGGGCACATGAACAAAGTGGCCATGGTGGT...GAGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS CCA 90 bp | GTTGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTTGGTACATaGGCGGCACGATTCTGGAAATTTTGGGTCATAGTAGTAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VAFLEDRDSLGTLGT*AARFWKFWVIVVKT Trigger: GGTCTTTACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATACATCCAGCCAATCCATaGGCTACAGCCCATGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFSVEFTDPGKKVREVTIHPANP*ATAHES Trigger: TGACTCATGGGCTGTAGCCAATGGATTGGCTGGATG...TATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGGACCATTCATCCTGAGTTTCTTTTGGACCTGATACCAGGACTTGCCTTCCTTCTCACATTGTCCTaGAGTATGGGGGATTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QWTIHPEFLLDLIPGLAFLLTLS*SMGDFA Trigger: TGCGAAATCCCCCATACTCAAGGACAATGTGAGAAG...GAAGGCAAGTCCTGGTATCAGGTCCAAAAGAAACTCAGGATGAATGGTCCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGCTGCAGAGGGCAATTGTTAACCTGTGGTGGTTTGAATTGGTTTGGCCCCTGAGGCAGATCTTCTaGAAACAGATGAACTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RELQRAIVNLWWFELVWPLRQIF*KQMNCT Trigger: TGTGCAGTTCATCTGTTTCAAGAAGATCTGCCTCAG...GGGCCAAACCAATTCAAACCACCACAGGTTAACAATTGCCCTCTGCAGCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGACCATTCATCCTGAGTTTCTTTTGGACCTGATACCAGGACTTGCCTTCGCCGGTTTCTGGGATTaGAAACAGATGAACTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QWTIHPEFLLDLIPGLAFAGFWD*KQMNCT Trigger: TGTGCAGTTCATCTGTTTCAAATCCCAGAAACCGGC...GAAGGCAAGTCCTGGTATCAGGTCCAAAAGAAACTCAGGATGAATGGTCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075588.13 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGAAAGTGCCCATGTGCAGAGAGAGAACAAGGAAGACCAAAATCCTCTGGGTCATCGTATCCACTaGATTATTGAACTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRESAHVQRENKEDQNPLGHRIH*IIELLL Trigger: GAGGAGGAGTTCAATAATCAAGTGGATACGATGACC...CAGAGGATTTTGGTCTTCCTTGTTCTCTCTCTGCACATGGGCACTTTCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAACAAGGCACTGATCACACCCCTAGGCAAAAAGAAATTTACTGAGCAGCTTCTCACATTGTCCTaGAGTATGGGGGATTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: IENKALITPLGKKKFTEQLLTLS*SMGDFA Trigger: TGCGAAATCCCCCATACTCAAGGACAATGTGAGAAG...CTGCTCAGTAAATTTCTTTTTGCCTAGGGGTGTGATCAGTGCCTTGTTCTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGAGTTCACTATGGTAGGTTGCAGAAGCCTGCAGGAACAAGTGATCCATACGATTCTGGAAATTTaGGGTCATAGTAGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLEFTMVGCRSLQEQVIHTILEI*GHSSKD Trigger: GTCTTTACTACTATGACCCAAAATTTCCAGAATCGT...ATGGATCACTTGTTCCTGCAGGCTTCTGCAACCTACCATAGTGAACTCCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTCAGTTGAGTTCACTGACCCAGGGAAGAAGGTGAGGGAAGTTACCATATCTGGCCATTTCTTCTaGCAAACAAACTGTAATACC | + |
|
Preference number: 5 (lower is better) Translates to: LFSVEFTDPGKKVREVTISGHFF*QTNCNT Trigger: GGTATTACAGTTTGTTTGCAAGAAGAAATGGCCAGA...TATGGTAACTTCCCTCACCTTCTTCCCTGGGTCAGTGAACTCAACTGAGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171066.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCTTCATCTAAATTGTTACTTACTCTCAAGGAGGGCCTCCACCAGAGAGCTACGATTCTGGAAATTTaGGGTCATAGTAGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSSKLLLTLKEGLHQRATILEI*GHSSKD Trigger: GTCTTTACTACTATGACCCAAAATTTCCAGAATCGT...AGCTCTCTGGTGGAGGCCCTCCTTGAGAGTAAGTAACAATTTAGATGAAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075588.13 ENSMUST00000146692.8 |
||
| CDS CCA 72 bp | GCTGTGGAGTTGCATTCCTGGAGGACAGGGATTCCTTaGGGACACTTGGTACATGGGCGGCACGATTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVELHSWRTGIP*GHLVHGRHDSG Trigger: TCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 72 bp | TTGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTaGGTACATGGGCGGCACGATTCTGGAAATTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LHSWRTGIPWGH*VHGRHDSGNFG Trigger: CCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CCA 72 bp | CTGGAGGACAGGGATTCCTTGGGGACACTTGGTACATaGGCGGCACGATTCTGGAAATTTTGGGTCATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LEDRDSLGTLGT*AARFWKFWVIV Trigger: TACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 90 bp | TTCCTTGGGGACACTTGGTACATGGGCGGCACGATTCTGGAAATTTaGGGTCATAGTAGTAAAGACCTGTTCGGCACTGGCATTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLGDTWYMGGTILEI*GHSSKDLFGTGISG Trigger: ACCGGAAATGCCAGTGCCGAACAGGTCTTTACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTCCCCAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS GCA 72 bp | ATGGGGGATTTCGCAGGGCGCCTTGACAAATGTACCTaGAGAACAGTTCTTGCAACAGACGTCTTTAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: MGDFAGRLDKCT*RTVLATDVFRP Trigger: TGGTCTAAAGACGTCTGTTGCAAGAACTGTTCTGCAGGTACATTTGTCAAGGCGCCCTGCGAAATCCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 72 bp | CAGGGCGCCTTGACAAATGTACCTGCAGAACAGTTCTaGCAACAGACGTCTTTAGACCAGTATTCACCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QGALTNVPAEQF*QQTSLDQYSPA Trigger: CGCTGGTGAATACTGGTCTAAAGACGTCTGTTGCAAGAACTGTTCTGCAGGTACATTTGTCAAGGCGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 72 bp | TGTGAATGTTCCTGGGTGACACTTCTCACATTGTCCTaGAGTATGGGGGATTTCGCAGGGCGCCTTGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: CECSWVTLLTLS*SMGDFAGRLDK Trigger: TTTGTCAAGGCGCCCTGCGAAATCCCCCATACTCAAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 72 bp | TTTCTCTGTGAATGTTCCTGGGTGACACTTCTCACATaGTCCTTGAGTATGGGGGATTTCGCAGGGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLCECSWVTLLT*SLSMGDFAGRL Trigger: AAGGCGCCCTGCGAAATCCCCCATACTCAAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
||
| CDS CAA 72 bp | GACACTTGGTACATGGGCGGCACGATTCTGGAAATTTaGGGTCATAGTAGTAAAGACCTGTTCGGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: DTWYMGGTILEI*GHSSKDLFGTG Trigger: GCCAGTGCCGAACAGGTCTTTACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS CCA 72 bp | ACACTTGGTACATGGGCGGCACGATTCTGGAAATTTTaGGTCATAGTAGTAAAGACCTGTTCGGCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TLGTWAARFWKF*VIVVKTCSALA Trigger: TGCCAGTGCCGAACAGGTCTTTACTACTATGACCCAAAATTTCCAGAATCGTGCCGCCCATGTACCAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS CAA 90 bp | GATCTTCTTGAAACAGATGAACTGCACACAGTGTTAGCTGTGGAGTaGCATTCCTGGAGGACAGGGATTCCTTGGGGACACTTGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: DLLETDELHTVLAVE*HSWRTGIPWGHLVH Trigger: ATGTACCAAGTGTCCCCAAGGAATCCCTGTCCTCCAGGAATGCAACTCCACAGCTAACACTGTGTGCAGTTCATCTGTTTCAAGAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS CAA 90 bp | GTAATTATCTTTCTCTGTGAATGTTCCTGGGTGACACTTCTCACATaGTCCTTGAGTATGGGGGATTTCGCAGGGCGCCTTGACAAATGT | + |
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Preference number: 6 (lower is better) Translates to: VIIFLCECSWVTLLT*SLSMGDFAGRLDKC Trigger: ACATTTGTCAAGGCGCCCTGCGAAATCCCCCATACTCAAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACAGAGAAAGATAATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS CCA 72 bp | AGCAGTCGGCCACCATTTCCTGATCTTTATCACAGGTaGAGCAAAGTATACAAGCATCCAGGTAATTATCTT | + |
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Preference number: 6 (lower is better) Translates to: SSRPPFPDLYHR*SKVYKHPGNYL Trigger: AAGATAATTACCTGGATGCTTGTATACTTTGCTCCACCTGTGATAAAGATCAGGAAATGGTGGCCGACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS CAA 72 bp | CAGACGTCTTTAGACCAGTATTCACCAGCGGGACATTaGAAGGAGTGTAATTCTAGCATAGCAAATTTTACC | + |
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Preference number: 6 (lower is better) Translates to: QTSLDQYSPAGH*KECNSSIANFT Trigger: GGTAAAATTTGCTATGCTAGAATTACACTCCTTCAAATGTCCCGCTGGTGAATACTGGTCTAAAGACGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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| CDS TCA 72 bp | AAAGTATACAAGCATCCAGGTAATTATCTTTCTCTGTaGATGTTCCTGGGTGACACTTCTCACATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KVYKHPGNYLSL*MFLGDTSHIVL Trigger: AAGGACAATGTGAGAAGTGTCACCCAGGAACATTCACAGAGAAAGATAATTACCTGGATGCTTGTATACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075588.13 ENSMUST00000084396.4 ENSMUST00000146692.8 |
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