Pregenerated sensors for TNFRSF1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028599Ensembl transcript IDs: ENSMUST00000030336.11, ENSMUST00000143055.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGAAGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTaGTGGAACCGCCCTGCAGTGTCAGCATTCAGGCTGAAGAGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: PEGPLCPTRPPLAPT*WNRPAVSAFRLKSC Trigger: ACAGCTCTTCAGCCTGAATGCTGACACTGCAGGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCTTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 90 bp | AGTACAGTACCAAGCCGTTGGGGAGTTAGAGGGAGTGCTCCAGGCTaGGGTAGGAAGAGACAGGTGGCTGCAGGGGCCTGGGAACTCTAC | + |
|
Preference number: 1 (lower is better) Translates to: STVPSRWGVRGSAPG*GRKRQVAAGAWELY Trigger: GTAGAGTTCCCAGGCCCCTGCAGCCACCTGTCTCTTCCTACCTCAGCCTGGAGCACTCCCTCTAACTCCCCAACGGCTTGGTACTGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR GCA 90 bp | CCAGCCCTCTGTGTGCCCACCAGAGTAAAAGTCAAAGGCAGAGGCTaGAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: PALCVPTRVKVKGRG*KPHRGLAVLSAVCC Trigger: ACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTGCAGCCTCTGCCTTTGACTTTTACTCTGGTGGGCACACAGAGGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 90 bp | AGGAAGAGACAGGTGGCTGCAGGGGCCTGGGAACTCTACAGTCCCTaGGATTCCCTGAAGGAAGGCGTGGCCTTGGAAGGGCTCATTAGA | + |
|
Preference number: 1 (lower is better) Translates to: RKRQVAAGAWELYSP*DSLKEGVALEGLIR Trigger: TCTAATGAGCCCTTCCAAGGCCACGCCTTCCTTCAGGGAATCTCAGGGACTGTAGAGTTCCCAGGCCCCTGCAGCCACCTGTCTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 90 bp | AGGCCAGACTCAGAGCAGGAGATAGGGGCAAGCCTGGAGTCTACTTaGCTGGGTGTTTCCTCAGCATCCACAGGCTACAAGTGGGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: RPDSEQEIGASLEST*LGVSSASTGYKWET Trigger: TGTCTCCCACTTGTAGCCTGTGGATGCTGAGGAAACACCCAGCCAAGTAGACTCCAGGCTTGCCCCTATCTCCTGCTCTGAGTCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 90 bp | AGGTTCTCTGCAAGAGTGGCTGTAAAGGTGGGATGGGAGGTGGGGTaGGGTGGCTCAGCCAGGGCTCAGTGTACAAAACAACAACAAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RFSARVAVKVGWEVG*GGSARAQCTKQQQK Trigger: TTTTTGTTGTTGTTTTGTACACTGAGCCCTGGCTGAGCCACCCCACCCCACCTCCCATCCCACCTTTACAGCCACTCTTGCAGAGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 90 bp | CAAATTGTTCCCTGCTCCCCCTCCTCTGATTGCAGAGCCCTAAGCTaGTCTAAGCTAGTACAGCCATTGTTCACATCCACGGTGTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: QIVPCSPSSDCRALS*SKLVQPLFTSTVWA Trigger: AGCCCACACCGTGGATGTGAACAATGGCTGTACTAGCTTAGACCAGCTTAGGGCTCTGCAATCAGAGGAGGGGGAGCAGGGAACAATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 90 bp | AGAGTGATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTaGCACACACATACATGCAAACATGGACACACACACACACACACA | + |
|
Preference number: 1 (lower is better) Translates to: RVIKHTQSQPLASTH*HTHTCKHGHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTCCATGTTTGCATGTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 90 bp | TGGACACACACACACACACACACACACACACACACACACACACACTaGAGGAGGGAGATTCTGGACTGCCCATCCTTTAGGAATGTGTTA | + |
|
Preference number: 1 (lower is better) Translates to: WTHTHTHTHTHTHTH*RREILDCPSFRNVL Trigger: TAACACATTCCTAAAGGATGGGCAGTCCAGAATCTCCCTCCTTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 90 bp | CAAGAATGTGATGTGTGCACATATGCAGAAGCATGTATGGGGTGGTaGTCAGAGGACAACTTGCAGGAATCAGGTCTCTTCTACCTTATG | + |
|
Preference number: 1 (lower is better) Translates to: QECDVCTYAEACMGW*SEDNLQESGLFYLM Trigger: CATAAGGTAGAAGAGACCTGATTCCTGCAAGTTGTCCTCTGACCACCACCCCATACATGCTTCTGCATATGTGCACACATCACATTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTGAAGAGACAGGTGGCTaGAGGGGCCTGGGAACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPEETGG*RGLGTL Trigger: TAGAGTTCCCAGGCCCCTGCAGCCACCTGTCTCTTC...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR TCA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGGTCTCAGCCCTCACTTaGCCTGCAACTGGGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RTGHQGADVFLPLYSLMLVSALT*PATGAL Trigger: CAGAGCCCCAGTTGCAGGTCAAGTGAGGGCTGAGAC...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR TCA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGGGGAGTGCTCCAGGCTaGGGTAGGAAGAGACAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RTGHQGADVFLPLYSLMLGSAPG*GRKRQV Trigger: CACCTGTCTCTTCCTACCTCAGCCTGGAGCACTCCC...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTACCCGGACATGCACTTaGGGTCACAGCAAGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPTRTCT*GHSKYS Trigger: ACTGTACTTGCTGTGACCCCAAGTGCATGTCCGGGT...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTTGTTCCAACTCACAGTaGCTAACCCGGACATGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPCSNSQ*LTRTCT Trigger: AGTGCATGTCCGGGTTAGGCACTGTGAGTTGGAACA...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 90 bp | GAGGCCAGACTCAGAGCAGGAGATAGGGGCAAGCCTGGAGTCTACTaGGCTGGGTGTTTCCTCAGCATCCACAGGCTACAAGTGGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EARLRAGDRGKPGVY*AGCFLSIHRLQVGD Trigger: GTCTCCCACTTGTAGCCTGTGGATGCTGAGGAAACACCCAGCCAAGTAGACTCCAGGCTTGCCCCTATCTCCTGCTCTGAGTCTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | CAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTAGCCCTCACTTGACCTaGAACTGGGGCTCTGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QTTQGAGCAVCCLLSTYVSPHLT*NWGSGS Trigger: GCTTCCAGAGCCCCAGTTGCAGGTCAAGTGAGGGCT...AACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CCA 90 bp | CAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTCTTGCTCCTACTTGCTaGAACCGCCCTGCAGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QTTQGAGCAVCCLLSTYVLAPTC*NRPAVS Trigger: TGACACTGCAGGGCGGTTCCAGCAAGTAGGAGCAAG...AACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACAGCTGGCTGTGCTGTCTaGTGTCTGCTGTCTACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: CSLAHPLGIHTSTGAEATAGCAV*CLLSTY Trigger: GTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGC...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 90 bp | TCCTCTGATTGCAGAGCCCTAAGCTGGTCTAAGCTAGTACAGCCATaGTTCACATCCACGGTGTGGGCTTCCGAGATGACAGAACCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSDCRALSWSKLVQP*FTSTVWASEMTEPV Trigger: GACGGGTTCTGTCATCTCGGAAGCCCACACCGTGGATGTGAACAATGGCTGTACTAGCTTAGACCAGCTTAGGGCTCTGCAATCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACAGGAAGGCGTGGCCTTaGAAGGGCTCATTAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYRKAWP*KGSLEG Trigger: ACCTTCTAATGAGCCCTTCCAAGGCCACGCCTTCCT...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTGAGGAGTCTCCTGAACCCTTTCCTTCCAGGCATGCTAGGGGAGCAGGTCTTTGGCAAAAGAGCTaGCTTCAGCTGTTTCCGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLEESPEPFPSRHARGAGLWQKS*LQLFPG Trigger: ACCCGGAAACAGCTGAAGCCAGCTCTTTTGCCAAAG...ACCTGCTCCCCTAGCATGCCTGGAAGGAAAGGGTTCAGGAGACTCCTCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACACAACTTCCTGGGACTaGCCCCATAAAACACCATGG | + |
|
Preference number: 2 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYTTSWD*PHKTPW Trigger: CCATGGTGTTTTATGGGGGCAGTCCCAGGAAGTTGT...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACACAGGCTGAAGAGCTGTaGTATTCATGGAAGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CSLAHPLGIHTSTGAEATQAEEL*YSWKRM Trigger: CATCCTCTTCCATGAATAGCACAGCTCTTCAGCCTG...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR TCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACTGTCAGCATTCAGGCTaGAGAGCTGTGCTATTCATG | + |
|
Preference number: 2 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYCQHSG*RAVLFM Trigger: CATGAATAGCACAGCTCTTCAGCCTGAATGCTGACA...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACACAACTAGGCTCCTCTaGCAAGTTCATATCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYTTRLL*QVHIQW Trigger: CCACTGGATATGAACTTGGCAGAGGAGCCTAGTTGT...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACAATTCATTCTTTTGTTaGCTAGGAGGCCCGAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYNSFFC*LGGPRS Trigger: TGACCTCGGGCCTCCTAGGCAACAAAAGAATGAATT...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 90 bp | CAAAAAGCATTTATAAGCAGGAATTCTGTCCAGCACACAGTGCAATaGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QKAFISRNSVQHTVQ*LLSTPFRDPHKHRS Trigger: GCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCAATTGCACTGTGTGCTGGACAGAATTCCTGCTTATAAATGCTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGGTATACAAGTGTGAGGACCAGAATTCAGATCTCTAGTATTCATGTAAATGTGCTGTCTGCTGTCTaGTGTCTACTTACGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: CRYTSVRTRIQISSIHVNVLSAV*CLLTFC Trigger: GCAAAACGTAAGTAGACAGCAGACAGCAGACAGCAC...ATTTACATGAATACTAGAGATCTGAATTCTGGTCCTCACACTTGTATACCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 72 bp | CAGGTGGCTGCAGGGGCCTGGGAACTCTACAGTCCCTaGGATTCCCTGAAGGAAGGCGTGGCCTTGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVAAGAWELYSP*DSLKEGVALEG Trigger: CCCTTCCAAGGCCACGCCTTCCTTCAGGGAATCTCAGGGACTGTAGAGTTCCCAGGCCCCTGCAGCCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCACACCATGGCAGTTTTaGACCACTCTAGCTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EARGHPRTGHQGADVFLPTPWQF*TTLAVS Trigger: TGAGACAGCTAGAGTGGTCAAAAACTGCCATGGTGT...GGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | CTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTaGAACCGCCCTGCAGTGTCAGCATTCAGGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCPTRPPLAPTC*NRPAVSAFRLK Trigger: CTTCAGCCTGAATGCTGACACTGCAGGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACATGTCTCAGCCCTCACTaGACCTGCAACTGGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSLAHPLGIHTSTGAEATCLSPH*TCNWGS Trigger: AGAGCCCCAGTTGCAGGTCAAGTGAGGGCTGAGACA...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 72 bp | CAGGGGCCTGGGAACTCTACAGTCCCTGAGATTCCCTaGAGGAAGGCGTGGCCTTGGAAGGGCTCATTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGPGNSTVPEIP*RKAWPWKGSLE Trigger: TTCTAATGAGCCCTTCCAAGGCCACGCCTTCCTTCAGGGAATCTCAGGGACTGTAGAGTTCCCAGGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR GCA 72 bp | CAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCTaGAGTGTCAGCATTCAGGCTGAAGAGCTGTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: QATTCSYLLEPP*SVSIQAEELCY Trigger: ATAGCACAGCTCTTCAGCCTGAATGCTGACACTGCAGGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR GCA 72 bp | TGTGTGCCCACCAGAGTAAAAGTCAAAGGCAGAGGCTaGAAACCACACAGGGGGCTGGCTGTGCTGTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVPTRVKVKGRG*KPHRGLAVLSA Trigger: AGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTGCAGCCTCTGCCTTTGACTTTTACTCTGGTGGGCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR GCA 72 bp | AAGGCAGAGGCTGCAAACCACACAGGGGGCTGGCTGTaGTGTCTGCTGTCTGCTGTCTACTTACGTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KAEAANHTGGWL*CLLSAVYLRFA Trigger: TGCAAAACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTGCAGCCTCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | AAGTCAAAGGCAGAGGCTGCAAACCACACAGGGGGCTaGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGT | + |
|
Preference number: 3 (lower is better) Translates to: KSKAEAANHTGG*LCCLLSAVYLR Trigger: ACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTGCAGCCTCTGCCTTTGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | TCAGAGCAGGAGATAGGGGCAAGCCTGGAGTCTACTTaGCTGGGTGTTTCCTCAGCATCCACAGGCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: SEQEIGASLEST*LGVSSASTGYK Trigger: CTTGTAGCCTGTGGATGCTGAGGAAACACCCAGCCAAGTAGACTCCAGGCTTGCCCCTATCTCCTGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | CCCTGCTCCCCCTCCTCTGATTGCAGAGCCCTAAGCTaGTCTAAGCTAGTACAGCCATTGTTCACATCCACG | + |
|
Preference number: 3 (lower is better) Translates to: PCSPSSDCRALS*SKLVQPLFTST Trigger: CGTGGATGTGAACAATGGCTGTACTAGCTTAGACCAGCTTAGGGCTCTGCAATCAGAGGAGGGGGAGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 72 bp | TTGGAGAGGGTACTTCCTAAGAGTTTAGCACTAACCTaGAGGGCCTCTGTGCCCTACCAGGCCACCACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LERVLPKSLALT*RASVPYQATTC Trigger: GCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCTTCAGGTTAGTGCTAAACTCTTAGGAAGTACCCTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | CGGTTCTGCTGTTTAGTGCAGGCGCGGATCTCCACCTaGTCAGTGGTACAGGAAGAACTGCAGCTCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: RFCCLVQARIST*SVVQEELQLKH Trigger: ATGTTTGAGCTGCAGTTCTTCCTGTACCACTGACCAGGTGGAGATCCGCGCCTGCACTAAACAGCAGAACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| 3UTR CCA 72 bp | AAGGGAAATGGATCCAGCAAAAGTCATGAAGTTCCATaGGTTCAGGGTCTCGGGGGTCCCTTTGCAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGNGSSKSHEVP*VQGLGGPFAGC Trigger: ACACCCTGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGATCCATTTCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | TCTAAGCTAGTACAGCCATTGTTCACATCCACGGTGTaGGCTTCCGAGATGACAGAACCCGTCTCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKLVQPLFTSTV*ASEMTEPVSFP Trigger: TGGGAAGGAGACGGGTTCTGTCATCTCGGAAGCCCACACCGTGGATGTGAACAATGGCTGTACTAGCTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR-3UTR CAA 90 bp | AACCCGTCTCCTTCCCACAACACAATGAGGAGGCCAGACTCAGAGCAGGAGATAAGAATTTCGGTGGGCTaGGAGAGGGTACTTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NPSPSHNTMRRPDSEQEIRISVG*ERVLPK Trigger: CTTAGGAAGTACCCTCTCCAAGCCCACCGAAATTCT...TATCTCCTGCTCTGAGTCTGGCCTCCTCATTGTGTTGTGGGAAGGAGACGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR TCA 72 bp | ACACACACACACACACACACACACACACACACACACTaGAGGAGGGAGATTCTGGACTGCCCATCCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTH*RREILDCPSFR Trigger: CCTAAAGGATGGGCAGTCCAGAATCTCCCTCCTTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR GCA 72 bp | CAACCTCTGGCCTCCACACACTGGCACACACATACATaGAAACATGGACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: QPLASTHWHTHT*KHGHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTCCATGTTTGCATGTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CCA 72 bp | AAACACACCCAAAGCCAACCTCTGGCCTCCACACACTaGCACACACATACATGCAAACATGGACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KHTQSQPLASTH*HTHTCKHGHTH Trigger: GTGTGTGTGTCCATGTTTGCATGTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGTTCGGTCCCCAGCGCTaGCTGAGCTCTCTAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGHQGADVFLPLYSLMLFGPQR*LSSLGS Trigger: GCTCCCTAGAGAGCTCAGCCAGCGCTGGGGACCGAA...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | TGTGTGCCCACCAGAGTAAAAGTCAAAGGCAGAGGCTGCAAACCACACAGGGGGTGGGCGGGCACTGTGTaGCCGGTGGCCCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVPTRVKVKGRGCKPHRGWAGTV*PVAHSC Trigger: GCAGCTGTGGGCCACCGGGCACACAGTGCCCGCCCA...CCCCCTGTGTGGTTTGCAGCCTCTGCCTTTGACTTTTACTCTGGTGGGCACACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTCGACAGCTGCCAGAATaGGTTTTCAAGGCGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPRQLPE*VFKAQY Trigger: GTACTGCGCCTTGAAAACCCATTCTGGCAGCTGTCG...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTGCACACATCAGTGGATaGTGTGGTGTCAGAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPAHISG*CGVRER Trigger: ACGTTCTCTGACACCACATCATCCACTGATGTGTGC...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | TGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCCTTGGGCCTCCGCCATaGCTCTTGCTTGGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGLSEARIRQEPRRSRGVLGPPP*LLLGDG Trigger: GCCATCCCCAAGCAAGAGTCATGGCGGAGGCCCAAG...GACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | AACCCGTCTCCTTCCCACAACACAATGAGGAGGCCAGACTCAGAGCAGGAGATACTGGCACGGGCCTCCTaGAACCCTTGGGCCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSPSHNTMRRPDSEQEILARAS*NPWASA Trigger: GGCGGAGGCCCAAGGGTTTCAGGAGGCCCGTGCCAG...TATCTCCTGCTCTGAGTCTGGCCTCCTCATTGTGTTGTGGGAAGGAGACGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGGCTGCTGGAACTGGGTaGTGTGGTCAACAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGHQGADVFLPLYSLMLAAGTG*CGQQVL Trigger: CAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGC...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGTCCGTGGGAAGAATCTaGAATCCTGGAGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RTGHQGADVFLPLYSLMLSVGRI*NPGAGT Trigger: CGTGCCAGCTCCAGGATTTCAGATTCTTCCCACGGA...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACACTGGGTCTCCCACTGTaGCGCTGGCTTGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLAHPLGIHTSTGAEATLGLPL*RWLGKS Trigger: GCTCTTCCCAAGCCAGCGCCACAGTGGGAGACCCAG...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACACTGGGCCCTGGCTCTTaGTCCAGGGGTTGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLAHPLGIHTSTGAEATLGPGS*SRGWDL Trigger: AAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAG...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTACAGGAAGAACTGCAGCTCAAACATGTACGAAACTGGTTCCAGACCTTGGGCGGGCACTGTGTaGCCGGTGGCCCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWYRKNCSSNMYETGSRPWAGTV*PVAHSC Trigger: GCAGCTGTGGGCCACCGGGCACACAGTGCCCGCCCA...AGGTCTGGAACCAGTTTCGTACATGTTTGAGCTGCAGTTCTTCCTGTACCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCCTTGGCTGGGCTTCATaGCCATATCCGGCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLSEARIRQEPRRSRGVLGWAS*PYPAHQ Trigger: TTGGTGTGCCGGATATGGGCATGAAGCCCAGCCAAG...GACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTTGGAACTGGGTGCTGTaGTCAACAGGTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPLRSKNQARAQEIQRGWNWVL*STGAAA Trigger: AGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCA...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAAAAGTCATGAAGTTCCATGGGTTCAGGGTCTCGGGGGTCCCTTTGCAATCCTTTGGGGACGCTaGGGGCTTGGCATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSHEVPWVQGLGGPFAILWGR*GLGIWV Trigger: GACCCAGATGCCAAGCCCTCAGCGTCCCCAAAGGAT...TGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAAAAGTCATGAAGTTCCATGGGTTCAGGGTCTCGGGGGTCCCTTTGCAGACGGACACTCCTCCTaGGAGAAGGGGACCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSHEVPWVQGLGGPFADGHSS*EKGTCS Trigger: TGAGCAGGTCCCCTTCTCTCAGGAGGAGTGTCCGTC...TGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAAAAGTCATGAAGTTCCATGGGTTCAGGGTCTCGGGGGTCCCTTTGCATCTCTAGGGAGCTGCTaGTGGAACTGGGTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSHEVPWVQGLGGPFASLGSC*WNWVLW Trigger: CCACAGCACCCAGTTCCAGCAGCAGCTCCCTAGAGA...TGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTGGCTTCTCATGGCTCTaGAGTGTCTCTGTAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGPLRSKNQARAQEIQRGGFSWL*SVSVVS Trigger: TGAGACTACAGAGACACTGCAGAGCCATGAGAAGCC...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACAGCGCGGATCTCCACCTaGTCAGTGGTACAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLAHPLGIHTSTGAEATARIST*SVVQEE Trigger: TTCTTCCTGTACCACTGACCAGGTGGAGATCCGCGC...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 72 bp | ACACCCAGGAACAGTCCTTTCCAATTCATTCTTTTGTaGCCTAGGAGGCCCGAGGTCATCCCAGGACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPRNSPFQFILL*PRRPEVIPGRA Trigger: GGCCCGTCCTGGGATGACCTCGGGCCTCCTAGGCAACAAAAGAATGAATTGGAAAGGACTGTTCCTGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 72 bp | GCCACACCCAGGAACAGTCCTTTCCAATTCATTCTTTaGTTGCCTAGGAGGCCCGAGGTCATCCCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPRNSPFQFIL*LPRRPEVIPGR Trigger: CCGTCCTGGGATGACCTCGGGCCTCCTAGGCAACAAAAGAATGAATTGGAAAGGACTGTTCCTGGGTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | AACCCGTCTCCTTCCCACAACACAATGAGGAGGCCAGACTCAGAGCAGGAGATAAGATGCGGTGGGGCCTaGACACATCAGTGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPSPSHNTMRRPDSEQEIRCGGA*THQWMM Trigger: CATCATCCACTGATGTGTGCAGGCCCCACCGCATCT...TATCTCCTGCTCTGAGTCTGGCCTCCTCATTGTGTTGTGGGAAGGAGACGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACCTCGGGCGCACAGACTaGATCTGTGCTTGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYLGRTD*ICACIS Trigger: GGAAATGCAAGCACAGATGCAGTCTGTGCGCCCGAG...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTAACTGGTTCCAGACCTaGGTATACATGCTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGPLRSKNQARAQEIQRGNWFQT*VYMLAS Trigger: TGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTT...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | CAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTTCTCCACCTGGTCAGTaGTACAGGAAGAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTTQGAGCAVCCLLSTYVSPPGQ*YRKNCS Trigger: GCTGCAGTTCTTCCTGTACCACTGACCAGGTGGAGA...AACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTTCTTGAGGAGTCTCCTGAACCCTTTCCTTCCAGGCATGCTAGGGGAGATGCTACAGATGCGGTaGGGCCTGCACACATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCFLRSLLNPFLPGMLGEMLQMR*GLHTSV Trigger: CACTGATGTGTGCAGGCCCCACCGCATCTGTAGCAT...CTCCCCTAGCATGCCTGGAAGGAAAGGGTTCAGGAGACTCCTCAAGAAGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCATGGAAGAGCATGCTTGGAGTTTGGCTaGGCCCTGGCTCTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSKNQARAQEIQRGHGRACLEFG*ALALDP Trigger: TGGATCAAGAGCCAGGGCCCAGCCAAACTCCAAGCA...TGCTCTTCCATGACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGAGGAGTCTCCTGAACCCTTTCCTTCCAGGCATGCTAGGGGAGCAGGTCTGCTCAAGGCCTACTaGATCCTGGGATTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLEESPEPFPSRHARGAGLLKAY*ILGFLI Trigger: GATGAGAAATCCCAGGATGCAGTAGGCCTTGAGCAG...ACCTGCTCCCCTAGCATGCCTGGAAGGAAAGGGTTCAGGAGACTCCTCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTTAGCACACCCTTTAGGGATCCACACAAGCACAGGAGCTGAGGCCACAAGGCCTACTGCATCCTaGGATTTCTCATCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLAHPLGIHTSTGAEATRPTAS*DFSSGT Trigger: TGTGCCTGATGAGAAATCCCAGGATGCAGTAGGCCT...TGTGGCCTCAGCTCCTGTGCTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | AACCCGTCTCCTTCCCACAACACAATGAGGAGGCCAGACTCAGAGCAGGAGATATCAAACCAGCCAGCTTaGCTGGGCTTCATGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NPSPSHNTMRRPDSEQEISNQPA*LGFMPI Trigger: TATGGGCATGAAGCCCAGCCAAGCTGGCTGGTTTGA...TATCTCCTGCTCTGAGTCTGGCCTCCTCATTGTGTTGTGGGAAGGAGACGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 72 bp | GGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTTaGCATGTGTTGCTGAGGATCAAACCCAGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GCAVCCLLSTYV*HVLLRIKPRAC Trigger: GCATGCCCTGGGTTTGATCCTCAGCAACACATGCAAAACGTAAGTAGACAGCAGACAGCAGACAGCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTTGGTACAGGAAGAACTaGAGCTCAAACATGTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPLRSKNQARAQEIQRGWYRKN*SSNMYE Trigger: TTCGTACATGTTTGAGCTGCAGTTCTTCCTGTACCA...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACTGCACTGTCGACAGCTaGCAGAATGGGTTTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYCTVDS*QNGFSR Trigger: CCTTGAAAACCCATTCTGGCAGCTGTCGACAGTGCA...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCATGGAAGAGCAGACTGCATCTGTGCTTaGATTTCCGGGAATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSKNQARAQEIQRGHGRADCICA*ISGNSQ Trigger: CTGGCTATTCCCGGAAATGCAAGCACAGATGCAGTC...TGCTCTTCCATGACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAAAAGTCATGAAGTTCCATGGGTTCAGGGTCTCGGGGGTCCCTTTGCACATCAGTGGATGATGTaGTGTCAGAGAACGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSHEVPWVQGLGGPFAHQWMM*CQRTSL Trigger: CAGGGACGTTCTCTGACACCACATCATCCACTGATG...TGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACGCCTGCACACATCAGTaGATGATGTGGTGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYACTHQ*MMWCQR Trigger: TCTCTGACACCACATCATCCACTGATGTGTGCAGGC...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTAACAATCAGACCAATTaGAAGAGAGATGCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGPLRSKNQARAQEIQRGNNQTN*KRDATL Trigger: AAGGGTGGCATCTCTCTTCCAATTGGTCTGATTGTT...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | AGATCCAGAGGGGTCATGGAAGAGCAACAACTTCCTGGGACTGCCCCCATAAAAGCACATGAGGCACCTTaGCATCTCTTTGTAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRGVMEEQQLPGTAPIKAHEAP*HLFVGR Trigger: CCTGCCTACAAAGAGATGCCAAGGTGCCTCATGTGC...TTTTATGGGGGCAGTCCCAGGAAGTTGTTGCTCTTCCATGACCCCTCTGGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | GATCAAACACACCCAAAGCCAACCTCTGGCCTCCACACACTGGCACACACATACGGCTTCTTTTTCCTCTaGACCAGGATGATGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQTHPKPTSGLHTLAHTYGFFFL*TRMMQF Trigger: GAACTGCATCATCCTGGTGCAGAGGAAAAAGAAGCC...GTATGTGTGTGCCAGTGTGTGGAGGCCAGAGGTTGGCTTTGGGTGTGTTTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCATGGAAGAGCATCAGGCCACTTTGACTaGAATCTGATCAAACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSKNQARAQEIQRGHGRASGHFD*NLIKPA Trigger: GGCTGGTTTGATCAGATTGCAGTCAAAGTGGCCTGA...TGCTCTTCCATGACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGAGGAGTCTCCTGAACCCTTTCCTTCCAGGCATGCTAGGGGAGCAGGTCAATTGGAAGAGAGATaGCACCCTTGGTACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEESPEPFPSRHARGAGQLEER*HPWYFV Trigger: AACAAAGTACCAAGGGTGGCATCTCTCTTCCAATTG...ACCTGCTCCCCTAGCATGCCTGGAAGGAAAGGGTTCAGGAGACTCCTCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCCATCTTGCCAGTTCAAAACTAACTTATTAAATAGGAAGGGGGAGCCCCTGAAATCCTGGAGCTaGCACGGGCCTCCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TEPSCQFKTNLLNRKGEPLKSWS*HGPPET Trigger: GGTTTCAGGAGGCCCGTGCCAGCTCCAGGATTTCAG...GGGCTCCCCCTTCCTATTTAATAAGTTAGTTTTGAACTGGCAAGATGGCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 72 bp | CATCCTTTAGGAATGTGTTATAGGTCAGCACTCAAATaGTTCCCTGCTCCCCCTCCTCTGATTGCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HPLGMCYRSALK*FPAPPPLIAEP Trigger: GGGCTCTGCAATCAGAGGAGGGGGAGCAGGGAACAATTTGAGTGCTGACCTATAACACATTCCTAAAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCCATCTTGCCAGTTCAAAACTAACTTATTAAATAGGAAGGGGGAGCCCGTCCCGTGGCTTCCGTaGGAAGAATCTGAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEPSCQFKTNLLNRKGEPVPWLP*EESEIL Trigger: CAGGATTTCAGATTCTTCCCACGGAAGCCACGGGAC...GGGCTCCCCCTTCCTATTTAATAAGTTAGTTTTGAACTGGCAAGATGGCTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTATACAAGTGTGAGGACCAGAATTCAGATCTCTAGTATTCATGTAAATGGGACGCTGAGGGCTTaGCATCTGGGTCTCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CRYTSVRTRIQISSIHVNGTLRA*HLGLPL Trigger: CAGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCC...ATTTACATGAATACTAGAGATCTGAATTCTGGTCCTCACACTTGTATACCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAAAAGTCATGAAGTTCCATGGGTTCAGGGTCTCGGGGGTCCCTTTGCATGTCCGAGGTCTTGTTaGAGAAATGTTTCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSHEVPWVQGLGGPFACPRSC*RNVSHI Trigger: AATATGTGAAACATTTCTGCAACAAGACCTCGGACA...TGCAAAGGGACCCCCGAGACCCTGAACCCATGGAACTTCATGACTTTTGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCCATCTTGCCAGTTCAAAACTAACTTATTAAATAGGAAGGGGGAGCCCAACTGTGGTCAGAGCTaGTACAGACGTTCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TEPSCQFKTNLLNRKGEPNCGQS*YRRSRC Trigger: GCATCGTGAACGTCTGTAGCAGCTCTGACCACAGTT...GGGCTCCCCCTTCCTATTTAATAAGTTAGTTTTGAACTGGCAAGATGGCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| 3UTR CAA 72 bp | TTTATAAGCAGGAATTCTGTCCAGCACACAGTGCAATaGCTCCTTAGCACACCCTTTAGGGATCCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISRNSVQHTVQ*LLSTPFRDPHK Trigger: CTTGTGTGGATCCCTAAAGGGTGTGCTAAGGAGCAATTGCACTGTGTGCTGGACAGAATTCCTGCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGTCAGTGGTACAGGAAGAACTGCAGCTCAAACATGTACGAAACTGGTTCCTGTCCGAGGTCTTGTTaGAGAAATGTTTCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: PGQWYRKNCSSNMYETGSCPRSC*RNVSHI Trigger: AATATGTGAAACATTTCTGCAACAAGACCTCGGACA...GGAACCAGTTTCGTACATGTTTGAGCTGCAGTTCTTCCTGTACCACTGACCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCCGCCATGACTCTTGCTaGGGGATGGCCCCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RASVPYQATTCSYLLEPPRHDSC*GMAPRG Trigger: CCCCCTGGGGGCCATCCCCAAGCAAGAGTCATGGCG...GGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 90 bp | GGGGCGCCCTTCGGTCCCCAGCGCTGGCTGAGCTCTCTAGGGAGCTaGTGCTGGAACTGGGTGCTGTGGTCAACAGGTGCTGCTGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GAPFGPQRWLSSLGS*CWNWVLWSTGAAAQ Trigger: TTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAGCTCCCTAGAGAGCTCAGCCAGCGCTGGGGACCGAAGGGCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GTTTGTAGGGTGTCAAGACAACCTGGGCGGGCACTGTGTGCCCGGTaGCCCACAGCTGCAGTTCGAAGACCAGCGCGACCCAGAGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCRVSRQPGRALCAR*PTAAVRRPARPRGR Trigger: CCGCCCTCTGGGTCGCGCTGGTCTTCGAACTGCAGCTGTGGGCCACCGGGCACACAGTGCCCGCCCAGGTTGTCTTGACACCCTACAAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030336.11 ENSMUST00000143055.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCGGCCTCCTGAAACCCTaGGGCCTCCGCCATGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RASVPYQATTCSYLLEPPGLLKP*GLRHDS Trigger: AGAGTCATGGCGGAGGCCCAAGGGTTTCAGGAGGCC...GGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGGCCCGAGGTCATCCCAGGACGGGCCACCAGGGGGCAGACGTGTTCCTCACTGTGGCGCTGGCTaGGGAAGAGCACTGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LGGPRSSQDGPPGGRRVPHCGAG*GRALRT Trigger: AGTTCTCAGTGCTCTTCCCAAGCCAGCGCCACAGTG...AGGAACACGTCTGCCCCCTGGTGGCCCGTCCTGGGATGACCTCGGGCCTCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCACGATGCAGGTGACGTaGACGTGGGTCCCGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASVPYQATTCSYLLEPPTMQVT*TWVPWL Trigger: AAGCCACGGGACCCACGTCAACGTCACCTGCATCGT...GGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 90 bp | GCAGGTGACGTTGACGTGGGTCCCGTGGCTTCCGTGGGAAGAATCTaGAATCCTGGAGCTGGCACGGGCCTCCTGAAACCCTTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGDVDVGPVASVGRI*NPGAGTGLLKPLGL Trigger: GAGGCCCAAGGGTTTCAGGAGGCCCGTGCCAGCTCCAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GGTCCCCAGCGCTGGCTGAGCTCTCTAGGGAGCTGCTGCTGGAACTaGGTGCTGTGGTCAACAGGTGCTGCTGCTCAAGGCCTACTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPQRWLSSLGSCCWN*VLWSTGAAAQGLLH Trigger: ATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAGCTCCCTAGAGAGCTCAGCCAGCGCTGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | CCTGAGAGAAGGGGACCTGCTCATCCTTTGGGGACGCTGAGGGCTTaGCATCTGGGTCTCCCACTGTGGCGCTGGCTTGGGAAGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PERRGPAHPLGTLRA*HLGLPLWRWLGKST Trigger: AGTGCTCTTCCCAAGCCAGCGCCACAGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCCAAAGGATGAGCAGGTCCCCTTCTCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCAAGGATGCTTGGAGTTaGGCTGGGCCCTGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASVPYQATTCSYLLEPPKDAWS*AGPWLL Trigger: CAAGAGCCAGGGCCCAGCCAAACTCCAAGCATCCTT...GGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTGGGGACGCTGAGGGCTaGGCATCTGGGTCTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LGPLRSKNQARAQEIQRGGDAEG*ASGSPT Trigger: AGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCC...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 90 bp | CTTCCGTGGGAAGAATCTGAAATCCTGGAGCTGGCACGGGCCTCCTaGAACCCTTGGGCCTCCGCCATGACTCTTGCTTGGGGATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPWEESEILELARAS*NPWASAMTLAWGWP Trigger: GGGCCATCCCCAAGCAAGAGTCATGGCGGAGGCCCAAGGGTTTCAGGAGGCCCGTGCCAGCTCCAGGATTTCAGATTCTTCCCACGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTGCTGGGCCCTGGCTCTaGATCCAGGGGTTGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPLRSKNQARAQEIQRGAGPWL*IQGLGS Trigger: AGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGC...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | CTGCTACAGACGTTCACGATGCAGGTGACGTTGACGTGGGTCCCGTaGCTTCCGTGGGAAGAATCTGAAATCCTGGAGCTGGCACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLQTFTMQVTLTWVP*LPWEESEILELARA Trigger: GGCCCGTGCCAGCTCCAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGTCTGTAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | TTGGGGACGCTGAGGGCTTGGCATCTGGGTCTCCCACTGTGGCGCTaGCTTGGGAAGAGCACTGAGAACTGTGGTCAGAGCTGCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGTLRAWHLGLPLWR*LGKSTENCGQSCYR Trigger: TCTGTAGCAGCTCTGACCACAGTTCTCAGTGCTCTTCCCAAGCCAGCGCCACAGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 90 bp | TTGGCATCTGGGTCTCCCACTGTGGCGCTGGCTTGGGAAGAGCACTaGGAACTGTGGTCAGAGCTGCTACAGACGTTCACGATGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LASGSPTVALAWEEH*ELWSELLQTFTMQV Trigger: CACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCACAGTTCTCAGTGCTCTTCCCAAGCCAGCGCCACAGTGGGAGACCCAGATGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GGATGCTACAGATGCGGTGGGGCCTGCACACATCAGTGGATGATGTaGTGTCAGAGAACGTCCCTGGGGCACAGGCCTTGCATAGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GCYRCGGACTHQWMM*CQRTSLGHRPCIAH Trigger: ATGTGCTATGCAAGGCCTGTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTGATGTGTGCAGGCCCCACCGCATCTGTAGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GGGATCTTGTGGGCTCTGGCTGAGATACGTAGAGTGTCCTTGGGATaGCACTTAGAGTTGGGGACTCGGGCGCACAGACTGCATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GILWALAEIRRVSLG*HLELGTRAHRLHLC Trigger: GCACAGATGCAGTCTGTGCGCCCGAGTCCCCAACTCTAAGTGCCATCCCAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCTGTGCCCTACCAGGCCACCACTTGCTCCTACTTGCTGGAACCGCCCCAACAATCAGACCAATaGGAAGAGAGATGCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RASVPYQATTCSYLLEPPQQSDQ*EERCHP Trigger: AGGGTGGCATCTCTCTTCCAATTGGTCTGATTGTTG...GGGCGGTTCCAGCAAGTAGGAGCAAGTGGTGGCCTGGTAGGGCACAGAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 90 bp | GGAACTGGGTGCTGTGGTCAACAGGTGCTGCTGCTCAAGGCCTACTaGATCCTGGGATTTCTCATCAGGCACATGAGGCACCTTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GTGCCGQQVLLLKAY*ILGFLIRHMRHLGI Trigger: GATGCCAAGGTGCCTCATGTGCCTGATGAGAAATCCCAGGATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GAGTTTGGCTGGGCCCTGGCTCTTGATCCAGGGGTTGGGATCTTGTaGGCTCTGGCTGAGATACGTAGAGTGTCCTTGGGATGGCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: EFGWALALDPGVGIL*ALAEIRRVSLGWHL Trigger: TAAGTGCCATCCCAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCCAAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | TGGTCAGAGCTGCTACAGACGTTCACGATGCAGGTGACGTTGACGTaGGTCCCGTGGCTTCCGTGGGAAGAATCTGAAATCCTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSELLQTFTMQVTLT*VPWLPWEESEILEL Trigger: CAGCTCCAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCCTCTCAGAAGCAAGAATCAGGCAAGAGCCCAGGAGATCCAGAGGGGTCCTGGGGCACAGGCCTaGCATAGCACATTTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPLRSKNQARAQEIQRGPGAQA*HSTFPF Trigger: AAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGG...ACCCCTCTGGATCTCCTGGGCTCTTGCCTGATTCTTGCTTCTGAGAGGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | AGGACGGGCCACCAGGGGGCAGACGTGTTCCTTCCCCTCTACAGTCTGATGCTGATACGTAGAGTGTCCTaGGGATGGCACTTAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTGHQGADVFLPLYSLMLIRRVS*GWHLEL Trigger: CAACTCTAAGTGCCATCCCAAGGACACTCTACGTAT...CAGCATCAGACTGTAGAGGGGAAGGAACACGTCTGCCCCCTGGTGGCCCGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTCCAGGGGTTGGGATCTaGTGGGCTCTGGCTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: QTTQGAGCAVCCLLSTYVPGVGI*WALAEI Trigger: TATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGG...AACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 90 bp | CAGTGGATGATGTGGTGTCAGAGAACGTCCCTGGGGCACAGGCCTTaGATAGCACATTTCCATTTGGGGCTCTTGAACTGGCCACTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QWMMWCQRTSLGHRP*IAHFHLGLLNWPLR Trigger: TCGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CAAACCACACAGGGGGCTGGCTGTGCTGTCTGCTGTCTGCTGTCTACTTACGTTATCAAACCAGCCAGCTaGGCTGGGCTTCATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTTQGAGCAVCCLLSTYVIKPAS*AGLHAH Trigger: ATGGGCATGAAGCCCAGCCAAGCTGGCTGGTTTGAT...AACGTAAGTAGACAGCAGACAGCAGACAGCACAGCCAGCCCCCTGTGTGGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | GCACACACGGTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATTaGCCCAGGTTCCGGTTTGTAGGGTGTCAAGACAACCTGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHTVSEVLLQKCFTY*PRFRFVGCQDNLGG Trigger: CCCGCCCAGGTTGTCTTGACACCCTACAAACCGGAACCTGGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS GCA 90 bp | TGCAGCTCAAACATGTACGAAACTGGTTCCAGACCTGGGTATACATaGTTGCCTCACAGTCCGCACACACGGTGTCCGAGGTCTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSNMYETGSRPGYT*LPHSPHTRCPRSCC Trigger: GCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 90 bp | CAGGAAGAACTGCAGCTCAAACATGTACGAAACTGGTTCCAGACCTaGGTATACATGCTTGCCTCACAGTCCGCACACACGGTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEELQLKHVRNWFQT*VYMLASQSAHTVSE Trigger: CTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGCTGCAGTTCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 90 bp | GCTCAAACATGTACGAAACTGGTTCCAGACCTGGGTATACATGCTTaGCTCACAGTCCGCACACACGGTGTCCGAGGTCTTGTTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQTCTKLVPDLGIHA*LTVRTHGVRGLVAE Trigger: TTCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 90 bp | ACACTTAGCACAGCACATCTGAGCCTTCCTGTCATAGTATTCCTGTaGGATCTGGCACTCGTACCCAGGTTCCGGTTTGTAGGGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLSTAHLSLPVIVFL*DLALVPRFRFVGCQ Trigger: TTGACACCCTACAAACCGGAACCTGGGTACGAGTGCCAGATCTCACAGGAATACTATGACAGGAAGGCTCAGATGTGCTGTGCTAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCCATCTTGCCAGTTCAAAACTAACTTATTAAATAGGAAGGGGGAGCCCCTCTTGATCCAGGGGTaGGGATCTTGTGGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEPSCQFKTNLLNRKGEPLLIQG*GSCGLW Trigger: CCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAG...GGGCTCCCCCTTCCTATTTAATAAGTTAGTTTTGAACTGGCAAGATGGCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS-3UTR CAA 90 bp | CTTCTTGAGGAGTCTCCTGAACCCTTTCCTTCCAGGCATGCTAGGGGAGCAGGTAGAGAGATGCCACCCTaGGTACTTTGTTCAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLEESPEPFPSRHARGAGREMPP*VLCSIM Trigger: CATTATTGAACAAAGTACCAAGGGTGGCATCTCTCT...ACCTGCTCCCCTAGCATGCCTGGAAGGAAAGGGTTCAGGAGACTCCTCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | ACCTGGGCGGGCACTGTGTGCCCGGTGGCCCACAGCTaGAGTTCGAAGACCAGCGCGACCCAGAGGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TWAGTVCPVAHS*SSKTSATQRAA Trigger: CGCCGCCCTCTGGGTCGCGCTGGTCTTCGAACTGCAGCTGTGGGCCACCGGGCACACAGTGCCCGCCCAGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030336.11 ENSMUST00000143055.2 |
||
| CDS CCA 72 bp | GTGTCAAGACAACCTGGGCGGGCACTGTGTGCCCGGTaGCCCACAGCTGCAGTTCGAAGACCAGCGCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: VSRQPGRALCAR*PTAAVRRPARP Trigger: GGGTCGCGCTGGTCTTCGAACTGCAGCTGTGGGCCACCGGGCACACAGTGCCCGCCCAGGTTGTCTTGACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030336.11 ENSMUST00000143055.2 |
||
| CDS CCA 72 bp | AGGGGACCTGCTCATCCTTTGGGGACGCTGAGGGCTTaGCATCTGGGTCTCCCACTGTGGCGCTGGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPAHPLGTLRA*HLGLPLWRWLG Trigger: CCCAAGCCAGCGCCACAGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCCAAAGGATGAGCAGGTCCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | GGTCCCCAGCGCTGGCTGAGCTCTCTAGGGAGCTGCTaGTGGAACTGGGTGCTGTGGTCAACAGGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPQRWLSSLGSC*WNWVLWSTGAA Trigger: AGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAGCTCCCTAGAGAGCTCAGCCAGCGCTGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | ACTGAGACGGACACTCCTCCTGAGAGAAGGGGACCTGCTCATCCTTaGGGGACGCTGAGGGCTTGGCATCTGGGTCTCCCACTGTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TETDTPPERRGPAHP*GTLRAWHLGLPLWR Trigger: GCGCCACAGTGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCCAAAGGATGAGCAGGTCCCCTTCTCTCAGGAGGAGTGTCCGTCTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | TTCGGTCCCCAGCGCTGGCTGAGCTCTCTAGGGAGCTaGTGCTGGAACTGGGTGCTGTGGTCAACAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGPQRWLSSLGS*CWNWVLWSTGA Trigger: AGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAGCTCCCTAGAGAGCTCAGCCAGCGCTGGGGACCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 72 bp | GCTACAGATGCGGTGGGGCCTGCACACATCAGTGGATaGTGTGGTGTCAGAGAACGTCCCTGGGGCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATDAVGPAHISG*CGVRERPWGTG Trigger: GCCTGTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTGATGTGTGCAGGCCCCACCGCATCTGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 72 bp | GTTGACGTGGGTCCCGTGGCTTCCGTGGGAAGAATCTaGAATCCTGGAGCTGGCACGGGCCTCCTGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: VDVGPVASVGRI*NPGAGTGLLKP Trigger: GGGTTTCAGGAGGCCCGTGCCAGCTCCAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | AGATGCGGTGGGGCCTGCACACATCAGTGGATGATGTaGTGTCAGAGAACGTCCCTGGGGCACAGGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RCGGACTHQWMM*CQRTSLGHRPC Trigger: GCAAGGCCTGTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTGATGTGTGCAGGCCCCACCGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | GACACTCCTCCTGAGAGAAGGGGACCTGCTCATCCTTaGGGGACGCTGAGGGCTTGGCATCTGGGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DTPPERRGPAHP*GTLRAWHLGLP Trigger: TGGGAGACCCAGATGCCAAGCCCTCAGCGTCCCCAAAGGATGAGCAGGTCCCCTTCTCTCAGGAGGAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | TCCCTGGGGCACAGGCCTTGCATAGCACATTTCCATTTGGGGCTCTaGAACTGGCCACTCCGAAGCCAGGGCCGCACTTGCTCAGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGHRPCIAHFHLGL*NWPLRSQGRTCSAS Trigger: TGAGGCTGAGCAAGTGCGGCCCTGGCTTCGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | CAGAGAACGTCCCTGGGGCACAGGCCTTGCATAGCACATTTCCATTaGGGGCTCTTGAACTGGCCACTCCGAAGCCAGGGCCGCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRTSLGHRPCIAHFH*GLLNWPLRSQGRTC Trigger: GCAAGTGCGGCCCTGGCTTCGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGACGTTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | CCACTCCGAAGCCAGGGCCGCACTTGCTCAGCCTCATaGACTGTCGACAGCTGCCAGAATGGGTTTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRSQGRTCSAS*TVDSCQNGFSR Trigger: CCTTGAAAACCCATTCTGGCAGCTGTCGACAGTGCATGAGGCTGAGCAAGTGCGGCCCTGGCTTCGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | GGATGCTACAGATGCGGTGGGGCCTGCACACATCAGTaGATGATGTGGTGTCAGAGAACGTCCCTGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCYRCGGACTHQ*MMWCQRTSLGH Trigger: GTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTGATGTGTGCAGGCCCCACCGCATCTGTAGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | CCCATATCCGGCACACCAAGGGGCAAGGGCTTCTCATaGCTCTGCAGTGTCTCTGTAGTCTCACACGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PISGTPRGKGFS*LCSVSVVSHGD Trigger: GTCCCCGTGTGAGACTACAGAGACACTGCAGAGCCATGAGAAGCCCTTGCCCCTTGGTGTGCCGGATATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | TCCCTGGGGCACAGGCCTTGCATAGCACATTTCCATTaGGGGCTCTTGAACTGGCCACTCCGAAGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGHRPCIAHFH*GLLNWPLRSQG Trigger: GCCCTGGCTTCGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | GGCTGGGCCCTGGCTCTTGATCCAGGGGTTGGGATCTaGTGGGCTCTGGCTGAGATACGTAGAGTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GWALALDPGVGI*WALAEIRRVSL Trigger: CAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | TTGGAGTTTGGCTGGGCCCTGGCTCTTGATCCAGGGGTTGGGATCTaGTGGGCTCTGGCTGAGATACGTAGAGTGTCCTTGGGATGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LEFGWALALDPGVGI*WALAEIRRVSLGWH Trigger: GTGCCATCCCAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCCAAACTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | GAGCTGCTGCTGGAACTGGGTGCTGTGGTCAACAGGTaGTGCTGCTCAAGGCCTACTGCATCCTGGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLLELGAVVNR*CCSRPTASWDF Trigger: GAAATCCCAGGATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | TGGGCCCTGGCTCTTGATCCAGGGGTTGGGATCTTGTaGGCTCTGGCTGAGATACGTAGAGTGTCCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WALALDPGVGIL*ALAEIRRVSLG Trigger: TCCCAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | CACAGGCCTTGCATAGCACATTTCCATTTGGGGCTCTaGAACTGGCCACTCCGAAGCCAGGGCCGCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HRPCIAHFHLGL*NWPLRSQGRTC Trigger: GCAAGTGCGGCCCTGGCTTCGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | TGGAGTTTGGCTGGGCCCTGGCTCTTGATCCAGGGGTaGGGATCTTGTGGGCTCTGGCTGAGATACGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WSLAGPWLLIQG*GSCGLWLRYVE Trigger: CTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCCAAACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | TGTAAGGATGCTTGGAGTTTGGCTGGGCCCTGGCTCTaGATCCAGGGGTTGGGATCTTGTGGGCTCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CKDAWSLAGPWL*IQGLGSCGLWL Trigger: CAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCCAAACTCCAAGCATCCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | GCTCTGGCTGAGATACGTAGAGTGTCCTTGGGATGGCACTTAGAGTaGGGGACTCGGGCGCACAGACTGCATCTGTGCTTGCATTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALAEIRRVSLGWHLE*GTRAHRLHLCLHFR Trigger: CCGGAAATGCAAGCACAGATGCAGTCTGTGCGCCCGAGTCCCCAACTCTAAGTGCCATCCCAAGGACACTCTACGTATCTCAGCCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | AAGGATGCTTGGAGTTTGGCTGGGCCCTGGCTCTTGATCCAGGGGTaGGGATCTTGTGGGCTCTGGCTGAGATACGTAGAGTGTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KDAWSLAGPWLLIQG*GSCGLWLRYVECPW Trigger: CCAAGGACACTCTACGTATCTCAGCCAGAGCCCACAAGATCCCAACCCCTGGATCAAGAGCCAGGGCCCAGCCAAACTCCAAGCATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | AGTTGGGGACTCGGGCGCACAGACTGCATCTGTGCTTaGATTTCCGGGAATAGCCAGGATGCTACAGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: SWGLGRTDCICA*ISGNSQDATDA Trigger: CGCATCTGTAGCATCCTGGCTATTCCCGGAAATGCAAGCACAGATGCAGTCTGTGCGCCCGAGTCCCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | CTGCTGCTGGAACTGGGTGCTGTGGTCAACAGGTGCTaGTGCTCAAGGCCTACTGCATCCTGGGATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLELGAVVNRC*CSRPTASWDFS Trigger: TGAGAAATCCCAGGATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | CAATCTGATCAAACCAGCCAGCTTGGCTGGGCTTCATaGCCATATCCGGCACACCAAGGGGCAAGGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSDQTSQLGWAS*PYPAHQGARAS Trigger: AGAAGCCCTTGCCCCTTGGTGTGCCGGATATGGGCATGAAGCCCAGCCAAGCTGGCTGGTTTGATCAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | ACGTTCACGATGCAGGTGACGTTGACGTGGGTCCCGTaGCTTCCGTGGGAAGAATCTGAAATCCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFTMQVTLTWVP*LPWEESEILEL Trigger: CAGCTCCAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | TCAGAGCTGCTACAGACGTTCACGATGCAGGTGACGTaGACGTGGGTCCCGTGGCTTCCGTGGGAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SELLQTFTMQVT*TWVPWLPWEES Trigger: AGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | TCAGTGGATGATGTGGTGTCAGAGAACGTCCCTGGGGCACAGGCCTaGCATAGCACATTTCCATTTGGGGCTCTTGAACTGGCCACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SVDDVVSENVPGAQA*HSTFPFGALELATP Trigger: CGGAGTGGCCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGACGTTCTCTGACACCACATCATCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | GAACTGTGGTCAGAGCTGCTACAGACGTTCACGATGCAGGTGACGTaGACGTGGGTCCCGTGGCTTCCGTGGGAAGAATCTGAAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ELWSELLQTFTMQVT*TWVPWLPWEESEIL Trigger: CAGGATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCACAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 72 bp | AGGCCTACTGCATCCTGGGATTTCTCATCAGGCACATaGGGCACCTTGGCATCTCTTTGTAGGCAGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTASWDFSSGT*GTLASLCRQEG Trigger: GCCCTCCTGCCTACAAAGAGATGCCAAGGTGCCTCATGTGCCTGATGAGAAATCCCAGGATGCAGTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | GACAGCTGCCAGAATGGGTTTTCAAGGCGCAGTACCTaGCAGCTTCGCAAGCACACACTCGGTTCTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DSCQNGFSRRST*QLRKHTLGSAV Trigger: AACAGCAGAACCGAGTGTGTGCTTGCGAAGCTGGCAGGTACTGCGCCTTGAAAACCCATTCTGGCAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | TGCTGTGGTCAACAGGTGCTGCTGCTCAAGGCCTACTaGATCCTGGGATTTCTCATCAGGCACATGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCGQQVLLLKAY*ILGFLIRHMRH Trigger: GTGCCTCATGTGCCTGATGAGAAATCCCAGGATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | CTGCTGGAACTGGGTGCTGTGGTCAACAGGTGCTGCTaGTCAAGGCCTACTGCATCCTGGGATTTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LLELGAVVNRCC*SRPTASWDFSS Trigger: TGATGAGAAATCCCAGGATGCAGTAGGCCTTGAGCAGCAGCACCTGTTGACCACAGCACCCAGTTCCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | GCATTTCCGGGAATAGCCAGGATGCTACAGATGCGGTaGGGCCTGCACACATCAGTGGATGATGTGGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AFPGIARMLQMR*GLHTSVDDVVS Trigger: TGACACCACATCATCCACTGATGTGTGCAGGCCCCACCGCATCTGTAGCATCCTGGCTATTCCCGGAAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | CTGCTACAGACGTTCACGATGCAGGTGACGTTGACGTaGGTCCCGTGGCTTCCGTGGGAAGAATCTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LLQTFTMQVTLT*VPWLPWEESEI Trigger: GATTTCAGATTCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAACGTCTGTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | GGCCACTTTGACTGCAATCTGATCAAACCAGCCAGCTaGGCTGGGCTTCATGCCCATATCCGGCACACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GHFDCNLIKPAS*AGLHAHIRHTK Trigger: CTTGGTGTGCCGGATATGGGCATGAAGCCCAGCCAAGCTGGCTGGTTTGATCAGATTGCAGTCAAAGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | CGCACACACGGTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATaGGCCCAGGTTCCGGTTTGTAGGGTGTCAAGACAACCTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RTHGVRGLVAEMFHI*AQVPVCRVSRQPGR Trigger: CCGCCCAGGTTGTCTTGACACCCTACAAACCGGAACCTGGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS GCA 72 bp | TGTACGAAACTGGTTCCAGACCTGGGTATACATGCTTaGCTCACAGTCCGCACACACGGTGTCCGAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CTKLVPDLGIHA*LTVRTHGVRGL Trigger: AAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | AACATGTACGAAACTGGTTCCAGACCTGGGTATACATaGTTGCCTCACAGTCCGCACACACGGTGTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NMYETGSRPGYT*LPHSPHTRCPR Trigger: CCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | ATGTGGTGTCAGAGAACGTCCCTGGGGCACAGGCCTTaGATAGCACATTTCCATTTGGGGCTCTTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: MWCQRTSLGHRP*IAHFHLGLLNW Trigger: CCAGTTCAAGAGCCCCAAATGGAAATGTGCTATGCAAGGCCTGTGCCCCAGGGACGTTCTCTGACACCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | GCCTCACAGTCCGCACACACGGTGTCCGAGGTCTTGTaGCAGAAATGTTTCACATATTGGCCAGGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: ASQSAHTVSEVL*QKCFTYWPGGH Trigger: GTGTCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | ATGTACGAAACTGGTTCCAGACCTGGGTATACATGCTaGCCTCACAGTCCGCACACACGGTGTCCGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MYETGSRPGYTC*PHSPHTRCPRS Trigger: AGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | CTGCAGCTCAAACATGTACGAAACTGGTTCCAGACCTaGGTATACATGCTTGCCTCACAGTCCGCACACACG | + |
|
Preference number: 6 (lower is better) Translates to: LQLKHVRNWFQT*VYMLASQSAHT Trigger: CGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | CTTGCCTCACAGTCCGCACACACGGTGTCCGAGGTCTaGTTGCAGAAATGTTTCACATATTGGCCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LASQSAHTVSEV*LQKCFTYWPGG Trigger: TCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | CGCACACACGGTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATaGGCCAGGAGGACACTTAGCACAGCACATCTGAGCCTTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RTHGVRGLVAEMFHI*ARRTLSTAHLSLPV Trigger: GACAGGAAGGCTCAGATGTGCTGTGCTAAGTGTCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | AGCTCAAACATGTACGAAACTGGTTCCAGACCTGGGTATACATGCTaGCCTCACAGTCCGCACACACGGTGTCCGAGGTCTTGTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSNMYETGSRPGYTC*PHSPHTRCPRSCCR Trigger: TCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | TACATGCTTGCCTCACAGTCCGCACACACGGTGTCCGAGGTCTTGTaGCAGAAATGTTTCACATATTGGCCAGGAGGACACTTAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YMLASQSAHTVSEVL*QKCFTYWPGGHLAQ Trigger: CTGTGCTAAGTGTCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 90 bp | GTATACATGCTTGCCTCACAGTCCGCACACACGGTGTCCGAGGTCTaGTTGCAGAAATGTTTCACATATTGGCCAGGAGGACACTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VYMLASQSAHTVSEV*LQKCFTYWPGGHLA Trigger: TGCTAAGTGTCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACCGTGTGTGCGGACTGTGAGGCAAGCATGTATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS TCA 72 bp | ACAGCACATCTGAGCCTTCCTGTCATAGTATTCCTGTaGGATCTGGCACTCGTACCCAGGTTCCGGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TAHLSLPVIVFL*DLALVPRFRFV Trigger: TACAAACCGGAACCTGGGTACGAGTGCCAGATCTCACAGGAATACTATGACAGGAAGGCTCAGATGTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS GCA 72 bp | GCATCTCTTTGTAGGCAGGAGGGCTTCTTTTTCCTCTaGACCAGGATGATGCAGTTCACCAGTCCTAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASLCRQEGFFFL*TRMMQFTSPNI Trigger: GATGTTAGGACTGGTGAACTGCATCATCCTGGTGCAGAGGAAAAAGAAGCCCTCCTGCCTACAAAGAGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CAA 72 bp | GGTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATaGGCCAGGAGGACACTTAGCACAGCACATCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVRGLVAEMFHI*ARRTLSTAHLS Trigger: GCTCAGATGTGCTGTGCTAAGTGTCCTCCTGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | GTACAGGAAGAACTGCAGCTCAAACATGTACGAAACTaGTTCCAGACCTGGGTATACATGCTTGCCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VQEELQLKHVRN*FQTWVYMLASQ Trigger: CTGTGAGGCAAGCATGTATACCCAGGTCTGGAACCAGTTTCGTACATGTTTGAGCTGCAGTTCTTCCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||
| CDS CCA 72 bp | GTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATTaGCCCAGGTTCCGGTTTGTAGGGTGTCAAGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: VSEVLLQKCFTY*PRFRFVGCQDN Trigger: GTTGTCTTGACACCCTACAAACCGGAACCTGGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS CAA 72 bp | GGTGTCCGAGGTCTTGTTGCAGAAATGTTTCACATATaGGCCCAGGTTCCGGTTTGTAGGGTGTCAAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: GVRGLVAEMFHI*AQVPVCRVSRQ Trigger: TTGTCTTGACACCCTACAAACCGGAACCTGGGCCAATATGTGAAACATTTCTGCAACAAGACCTCGGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143055.2 |
||
| CDS CAA 72 bp | CCAACAATCAGACCAATTGGAAGAGAGATGCCACCCTaGGTACTTTGTTCAATAATGGGGGTTGAACCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PTIRPIGREMPP*VLCSIMGVEPN Trigger: GTTGGGTTCAACCCCCATTATTGAACAAAGTACCAAGGGTGGCATCTCTCTTCCAATTGGTCTGATTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030336.11 |
||