Pregenerated sensors for TNFRSF18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041954Ensembl transcript IDs: ENSMUST00000040274.13, ENSMUST00000103173.10, ENSMUST00000122001.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTaGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: GKGAEHGPCSHQGYS*ASLVASGLGHRGRP Trigger: TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTGGGAAGTCTTGTAGCGTCTaGCTTGGGGCACAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AQGRVQNMAPALTKGIAGKSCSV*LGAQRK Trigger: CTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTT...CCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR-3UTR GCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCAAGGCCCAGGGAAGGGTaGAGAACATGGCCCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VFILVQDLVLNVVLLVGPRPREG*RTWPLL Trigger: GAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCT...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACTCACCGCTCTCATACCACTTTTCTTCTGTCTaGTCCCCGCGTTCCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CQMRKAAIGPNRNSPLSYHFSSV*SPRSSS Trigger: TGAGGAGGAACGCGGGGAGCAGACAGAAGAAAAGTG...GTATGAGAGCGGTGAGTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGAAGTCTTGTAGCGTCTaGCTTGGGGCACAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RQVFILVQDLVLNVVLLVKSCSV*LGAQRK Trigger: CTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTT...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR GCA 72 bp | GGGCCAGGCCCAGGGAAGGGTGCAGAACATGGCCCCTaGTCTCACCAAGGGTATAGCTGGGCAAGTCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: GPGPGKGAEHGP*SHQGYSWASLV Trigger: TACAAGACTTGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR CCA 72 bp | GCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTaGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: AEHGPCSHQGYS*ASLVASGLGHR Trigger: TCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR-3UTR CAA 90 bp | CCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCTTGTAGCGTCTGGCTaGGGGCACAGAGGAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: PKDPTPTELSNEKGSHRALVASG*GHRGRP Trigger: TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAG...GGCCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| 3UTR-3UTR CAA 90 bp | TGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACTCACCGCTCTCATACCTTGTAGCGTCTGGCTaGGGGCACAGAGGAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: CQMRKAAIGPNRNSPLSYLVASG*GHRGRP Trigger: TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAG...GTATGAGAGCGGTGAGTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | AGGGCCAGGCCCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTAACAGTCCTCCTTGCCTaGAGCATACAGGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RARPREGCRTWPLLSPRVTVLLA*SIQAAA Trigger: TGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACTGT...TACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTGGGCACTGGAGCATACAGGCTaGAGCAGCGAGTGTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PGKGAEHGPCSHQGYSWALEHTG*SSECCC Trigger: GCAACAACACTCGCTGCTGCAGCCTGTATGCTCCAG...TGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | TATAGCTGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCAGGCGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: YSWASLVASGLGHRGRPGDLRRR*PWHRQH Trigger: GTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTC...GCCTGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | CAGGGCCAGGCCCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTTATGCACCTTTCTTTTaGACAGTCCTCCTTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGQAQGRVQNMAPALTKGYAPFF*TVLLAW Trigger: CCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATA...ACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCTGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | CAGGGCCAGGCCCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTAAGATGACAGTCAAATaGCCGTATTGCTCAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QGQAQGRVQNMAPALTKGKMTVK*PYCSVG Trigger: GCCCACTGAGCAATACGGCCATTTGACTGTCATCTT...ACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCTGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTGGGCACAGGGAACTGGAAGCTaGAAGCATCCTCAGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: PGKGAEHGPCSHQGYSWAQGTGS*KHPQLT Trigger: TGTCAGCTGAGGATGCTTGCAGCTTCCAGTTCCCTG...TGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR TCA 90 bp | TGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCAGGCCTCATGTTGCAGATCTTGCACTaGGGGTCTCCACAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: WASLVASGLGHRGRPGLMLQILH*GSPQWY Trigger: GTACCACTGTGGAGACCCTCAGTGCAAGATCTGCAA...CATGAGGCCTGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| CDS-3UTR TCA 90 bp | GGGAAGGGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTGGGCAAGTTTGCAGATCTTGCACTaGGGGTCTCCACAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GKGAEHGPCSHQGYSWASLQILH*GSPQWY Trigger: GTACCACTGTGGAGACCCTCAGTGCAAGATCTGCAA...ACTTGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | GGTGGGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATCTCCACCCTCTGGCCTaGTTGGCAGGGGTAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GGPKDPTPTELSNEKGSHLHPLA*LAGVVL Trigger: AAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAG...ATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | GGTGGGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATTTCCGTTCTGAACCTTaGCAGGGCCACAGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GGPKDPTPTELSNEKGSHFRSEP*QGHSQA Trigger: AGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAA...ATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | TATAGCTGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCAGGCCTTTGGTCCAAAGTCTaGAGTGACCGTCACGACCTG | + |
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Preference number: 4 (lower is better) Translates to: YSWASLVASGLGHRGRPGLWSKV*SDRHDL Trigger: CAGGTCGTGACGGTCACTGCAGACTTTGGACCAAAG...GCCTGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| CDS-3UTR TCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACACTTCCGCCACTGTTaGGGGGAGCAGGGCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VFILVQDLVLNVVLLVGPHFRHC*GEQGQA Trigger: GGCCTGGCCCTGCTCCCCTCAACAGTGGCGGAAGTG...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
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| CDS-3UTR GCA 90 bp | CTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: LLQQSCQMRKAAIGPNRNDLRRR*PWHRQH Trigger: GTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTC...GTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | AGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACTCACCGCTCTCAGCAGTGGCTCCGGGATaGACACAGCATTGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SCQMRKAAIGPNRNSPLSAVAPG*TQHCGS Trigger: AGACCCACAATGCTGTGTGCATCCCGGAGCCACTGC...TGAGAGCGGTGAGTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | AAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCTCCACCCTCTGGCCTaGTTGGCAGGGGTAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KTLLQQSCQMRKAAIGPNLHPLA*LAGVVL Trigger: AAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAG...ATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | GGGTATAGCTGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCAATGCACACAGCATTGTaGGTCTTGTTCCCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GYSWASLVASGLGHRGRPMHTAL*VLFPGN Trigger: GTTCCCTGGGAACAAGACCCACAATGCTGTGTGCAT...TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | AGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACTCACCGCTCTCATTGGACAGTCCTCCTTaGCTGGAGCATACAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCQMRKAAIGPNRNSPLSLDSPP*LEHTGC Trigger: GCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAA...TGAGAGCGGTGAGTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | GGGTATAGCTGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCATATGCACCTTTCTTTTaGACAGTCCTCCTTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GYSWASLVASGLGHRGRPYAPFF*TVLLAW Trigger: CCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATA...TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | GGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGTCCTCCTCAGGGAACTaGAAGCTGCAAGCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GPKTLLQQSCQMRKAAIGSSSGN*KLQASS Trigger: TGAGGATGCTTGCAGCTTCCAGTTCCCTGAGGAGGA...CCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | CTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACACAGTCCTCCTTGCCTaGAGCATACAGGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLQQSCQMRKAAIGPNRNTVLLA*SIQAAA Trigger: TGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACTGT...GTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR CCA 90 bp | GGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGGAATGGCTGGGTCTTTaGTCCAAAGTCTGCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GPKTLLQQSCQMRKAAIGEWLGL*SKVCSD Trigger: GTCACTGCAGACTTTGGACCAAAGACCCAGCCATTC...CCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| CDS-3UTR CCA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCGGCCGTATTGCTCAGTaGGCAGTGGCTCCGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SIYSCTRSCAKRGALGGPGRIAQ*AVAPGC Trigger: GCATCCCGGAGCCACTGCCCACTGAGCAATACGGCC...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR TCA 90 bp | TGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCGTAACTCACCGCTCTCATACAACACAATATCCCCTTaGGACTCCACCCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CQMRKAAIGPNRNSPLSYNTISP*DSTLWP Trigger: AGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTT...GTATGAGAGCGGTGAGTTACGATTGGGCCCTATGGCTGCCTTTCTCATTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | AAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGCCCAATCACTTTTCTTCTGTCTaGTCCCCGCGTTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KTLLQQSCQMRKAAIGPNHFSSV*SPRSSS Trigger: TGAGGAGGAACGCGGGGAGCAGACAGAAGAAAAGTG...ATTGGGCCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS-3UTR GCA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCAGGCCCAGGGAAGGGTaGAGAACATGGCCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QVFILVQDLVLNVVLLVGRPREG*RTWPLL Trigger: GAGCAGGGGCCATGTTCTGCACCCTTCCCTGGGCCT...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
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| CDS-3UTR CCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACTCCACCCTCTGGCCTaGTTGGCAGGGGTAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VFILVQDLVLNVVLLVGPLHPLA*LAGVVL Trigger: AAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAG...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR GCA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCGCAGTGGCTCCGGGATaGACACAGCATTGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SIYSCTRSCAKRGALGGPAVAPG*TQHCGS Trigger: AGACCCACAATGCTGTGTGCATCCCGGAGCCACTGC...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR TCA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCTTGCCACTTCCGTTCTaGACCTTGCCAGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: QVFILVQDLVLNVVLLVGLPLPF*TLPGPQ Trigger: CTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAA...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR TCA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCTCCCTGGGACACAACTaGCCTCGAGGACACATGTGT | + |
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Preference number: 4 (lower is better) Translates to: SIYSCTRSCAKRGALGGPSLGHN*PRGHMC Trigger: ACACATGTGTCCTCGAGGTCAGTTGTGTCCCAGGGA...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
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| CDS-3UTR GCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACTGGAGCATACAGGCTaGAGCAGCGAGTGTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VFILVQDLVLNVVLLVGPLEHTG*SSECCC Trigger: GCAACAACACTCGCTGCTGCAGCCTGTATGCTCCAG...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CCA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACAGTCCTCCTTGCCTaGAGCATACAGGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SIYSCTRSCAKRGALGGPTVLLA*SIQAAA Trigger: TGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACTGT...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR TCA 90 bp | ACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGTTGCCACTTCCGTTCTaGACCTTGCCAGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TSIYSCTRSCAKRGALGGLPLPF*TLPGPQ Trigger: CTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAA...CCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR GCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVDLRRR*PWHRQH Trigger: GTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTC...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CCA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCTGCACCTCCGCGAATaGCTGGGTCTTTGGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QVFILVQDLVLNVVLLVGLHLRE*LGLWSK Trigger: TTTGGACCAAAGACCCAGCCATTCGCGGAGGTGCAG...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| CDS-3UTR CCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCATCCTCCTCAGGGAACTaGAAGCTGCAAGCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFILVQDLVLNVVLLVGPSSSGN*KLQASS Trigger: TGAGGATGCTTGCAGCTTCCAGTTCCCTGAGGAGGA...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACTGCACCTCCGCGAATaGCTGGGTCTCTGTAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFILVQDLVLNVVLLVGPLHLRE*LGLCSK Trigger: TTTACTACAGAGACCCAGCCATTCGCGGAGGTGCAG...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCAAGTCTTGTAGCGTCTaGCTTGGGGCACAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIYSCTRSCAKRGALGGPKSCSV*LGAQRK Trigger: CTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTT...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCAACACAATATCCCCTTaGGACTCCACCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFILVQDLVLNVVLLVGNTISP*DSTLWP Trigger: AGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTT...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGTTCCGTTCTGAACCTTaGCAGGGCCACAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVFRSEP*QGHSQA Trigger: AGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAA...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR TCA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGTTGCCACTTCCGTTCTaGACCTTGCCAGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TRQVFILVQDLVLNVVLLLPLPF*TLPGPQ Trigger: CTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAA...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGTTCCGTTCTGAACCTTaGCAGGGCCACAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRQVFILVQDLVLNVVLLFRSEP*QGHSQA Trigger: AGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAA...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGTTGGACAGTCCTCCTTaGCTGGAGCATACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVLDSPP*LEHTGC Trigger: GCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAA...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCAGGGAACTGGAAGCTaGAAGCATCCTCAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSIYSCTRSCAKRGALGGQGTGS*KHPQLT Trigger: TGTCAGCTGAGGATGCTTGCAGCTTCCAGTTCCCTG...CCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCATGCACACAGCATTGTaGGTCTTGTTCCCAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFILVQDLVLNVVLLVGMHTAL*VLFPGN Trigger: GTTCCCTGGGAACAAGACCCACAATGCTGTGTGCAT...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGAACACAATATCCCCTTaGGACTCCACCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVNTISP*DSTLWP Trigger: AGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTT...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGTTGGACAGTCCTCCTTaGCTGGAGCATACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRQVFILVQDLVLNVVLLLDSPP*LEHTGC Trigger: GCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAA...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGCACTTTTCTTCTGTCTaGTCCCCGCGTTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVHFSSV*SPRSSS Trigger: TGAGGAGGAACGCGGGGAGCAGACAGAAGAAAAGTG...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGACCTCCGCGAATGGCTaGGTCTCTGTAGTAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSIYSCTRSCAKRGALGGTSANG*VSVVKL Trigger: CAGTTTTACTACAGAGACCCAGCCATTCGCGGAGGT...CCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGCATTTTCCCCTTCCCTaGGACACAACTGACCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRQVFILVQDLVLNVVLLHFPLP*DTTDLE Trigger: CTCGAGGTCAGTTGTGTCCCAGGGAAGGGGAAAATG...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGTCCCAGGGAACATGGTaGGAAATCCAAACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVSQGTW*EIQTEN Trigger: GTTCTCAGTTTGGATTTCTCACCATGTTCCCTGGGA...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCAAACTGAGAACAGTTaGTCCAAAGTCTGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSIYSCTRSCAKRGALGGQTENS*SKVCSD Trigger: GTCACTGCAGACTTTGGACCAACTGTTCTCAGTTTG...CCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGAAGATGACAGTCAAATaGCCGTATTGCTCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVFILVQDLVLNVVLLVKMTVK*PYCSVG Trigger: GCCCACTGAGCAATACGGCCATTTGACTGTCATCTT...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | ACTCACCGCTCTCATACACCCACTTCCGCCACTGTTGAGGGGAGCAGGGCCAGGGGGATGCACACAGCATaGTGGGTCTTGTTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: THRSHTPTSATVEGSRARGMHTA*WVLFPG Trigger: CCCTGGGAACAAGACCCACAATGCTGTGTGCATCCC...CCTGGCCCTGCTCCCCTCAACAGTGGCGGAAGTGGGTGTATGAGAGCGGTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
||
| CDS TCA 90 bp | GGAGCATACAGGCTGCAGCAGCGAGTGTTGTTGCCACTTCCGTTCTaGACCTTGCCAGGGCCACAGCCAGGCTCCTCAACTACACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAYRLQQRVLLPLPF*TLPGPQPGSSTTLG Trigger: GCCGAGTGTAGTTGAGGAGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAACAACACTCGCTGCTGCAGCCTGTATGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS TCA 90 bp | ACTGCACCTCCGCGAATGGCTGGGTCTTTGGTCCAAAGTCTGCAGTaGCCGTCACGACCTGCGGAGAAGGTGCCCATGGCACAGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TAPPRMAGSLVQSLQ*PSRPAEKVPMAQAT Trigger: TGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTCGTGACGGTCACTGCAGACTTTGGACCAAAGACCCAGCCATTCGCGGAGGTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
||
| CDS GCA 90 bp | AGTCCTCCTTGCCTGGAGCATACAGGCTGCAGCAGCGAGTGTTGTTaGCACTTCCGTTCTGAACCTTGCCAGGGCCACAGCCAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPCLEHTGCSSECC*HFRSEPCQGHSQAP Trigger: AGGAGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAACAACACTCGCTGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 90 bp | ACAGGCTGCAGCAGCGAGTGTTGTTGCCACTTCCGTTCTGAACCTTaGCAGGGCCACAGCCAGGCTCCTCAACTACACTCGGCTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGCSSECCCHFRSEP*QGHSQAPQLHSADL Trigger: TAGGTCAGCCGAGTGTAGTTGAGGAGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAACAACACTCGCTGCTGCAGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 90 bp | TTTCTTCTGTCTGCTCCCCGCGTTCCTCCTCAGGGAACTGGAAGCTaGAAGCATCCTCAGCTGACAACTGCACCTCCGCGAATGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLSAPRVPPQGTGS*KHPQLTTAPPRMAG Trigger: CCCAGCCATTCGCGGAGGTGCAGTTGTCAGCTGAGGATGCTTGCAGCTTCCAGTTCCCTGAGGAGGAACGCGGGGAGCAGACAGAAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 90 bp | CCGGAAGCCAAACACAATATCCCCTTGAGACTCCACCCTCTGGCCTaGTTGGCAGGGGTAGTGCTTGCAGATCTTGCACTGAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PEAKHNIPLRLHPLA*LAGVVLADLALRVS Trigger: GGAGACCCTCAGTGCAAGATCTGCAAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTTTGGCTTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 90 bp | CTTTGGTCCAAAGTCTGCAGTGACCGTCACGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACACACCGGAAGCCAAACACAATATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWSKVCSDRHDLRRR*PWHRQHTGSQTQYP Trigger: GGGATATTGTGTTTGGCTTCCGGTGTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTCGTGACGGTCACTGCAGACTTTGGACCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040274.13 |
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| CDS GCA 90 bp | AGTTGGTCCAAAGTCTGCAGTGACCGTCACGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACACACCGGAAGCCAAACACAATATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSKVCSDRHDLRRR*PWHRQHTGSQTQYP Trigger: GGGATATTGTGTTTGGCTTCCGGTGTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTCGTGACGGTCACTGCAGACTTTGGACCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 90 bp | TCCAAAGTCTGCAGTGACCGTCACGACCTGCGGAGAAGGTGCCCATaGCACAGGCAACACACCGGAAGCCAAACACAATATCCCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKVCSDRHDLRRRCP*HRQHTGSQTQYPLE Trigger: CTCAAGGGGATATTGTGTTTGGCTTCCGGTGTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTCGTGACGGTCACTGCAGACTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 90 bp | AAGCTGCAAGCATCCTCAGCTGACAACTGCACCTCCGCGAATGGCTaGGTCTCTCGAGGACACATGTGTTGCCTCCTCAGCTGCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: KLQASSADNCTSANG*VSRGHMCCLLSCHM Trigger: CATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGAGAGACCCAGCCATTCGCGGAGGTGCAGTTGTCAGCTGAGGATGCTTGCAGCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS CCA 90 bp | AAGCTGCAAGCATCCTCAGCTGACAACTGCACCTCCGCGAATGGCTaGGTCTCTGTAGTAAAACTGCGTGCGGTAAGTGAGGGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLQASSADNCTSANG*VSVVKLRAVSEGPE Trigger: CTCAGGCCCCTCACTTACCGCACGCAGTTTTACTACAGAGACCCAGCCATTCGCGGAGGTGCAGTTGTCAGCTGAGGATGCTTGCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | GGGTATAGCTGGGCAAGTCTTGTAGCGTCTGGCTTGGGGCACAGAGGAAGACCATTTGGACAGTCCTCCTaGCCTGGAGCATACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GYSWASLVASGLGHRGRPFGQSS*PGAYRL Trigger: CAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAA...TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAGACTTGCCCAGCTATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
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| CDS GCA 90 bp | TGGGTCTCTCGAGGACACATGTGTTGCCTCCTCAGCTGCCATATGTaGAGGCCGAGCTGGACTGTGGTTAGGAAGAAAATGCATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WVSRGHMCCLLSCHM*RPSWTVVRKKMHAA Trigger: GGCTGCATGCATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGAGAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS CCA 90 bp | GACCAGGAAGATGACAGTCAAATGGCCGTATTGCTCAGTGGGCAGTaGCTCCGGGATGCACACAGCATTGTGGGTCTTGTTCCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DQEDDSQMAVLLSGQ*LRDAHSIVGLVPRE Trigger: TTCCCTGGGAACAAGACCCACAATGCTGTGTGCATCCCGGAGCCACTGCCCACTGAGCAATACGGCCATTTGACTGTCATCTTCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS CCA 90 bp | GGACACATGTGTTGCCTCCTCAGCTGCCATATGTGCAGGCCGAGCTaGACTGTGGTTAGGAAGAAAATGCATGCAGCCATGACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHMCCLLSCHMCRPS*TVVRKKMHAAMTRK Trigger: CTTCCTGGTCATGGCTGCATGCATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCCATAGGGTTTGGACAGTCCTCCTaGCCTGGAGCATACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPKTLLQQSCQMRKAAIGFGQSS*PGAYRL Trigger: CAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAA...CCCTATGGCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGTGGGCCCAAAGACCCTACTCCAACAGAGCTGTCAAATGAGAAAGGCAGCAGTCAAATGGCCGTATaGCTCAGTGGGCAGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGGPKDPTPTELSNEKGSSQMAV*LSGQWL Trigger: GAGCCACTGCCCACTGAGCAATACGGCCATTTGACT...GCTGCCTTTCTCATTTGACAGCTCTGTTGGAGTAGGGTCTTTGGGCCCACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
||
| CDS CCA 90 bp | GTCTCCACAGTGGTACTCAGGTGTGACACATATGCACCTTTCTTTTaGACAGTCCTCCTTGCCTGGAGCATACAGGCTGCAGCAGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTVVLRCDTYAPFF*TVLLAWSIQAAAAS Trigger: ACTCGCTGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATATGTGTCACACCTGAGTACCACTGTGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS TCA 90 bp | GCTTGCAGATCTTGCACTGAGGGTCTCCACAGTGGTACTCAGGTGTaGCACATATGCACCTTTCTTTTGGACAGTCCTCCTTGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACRSCTEGLHSGTQV*HICTFLLDSPPCLE Trigger: CTCCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATATGTGTCACACCTGAGTACCACTGTGGAGACCCTCAGTGCAAGATCTGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGAACATGGCCCCTGCTCTCACCAAGGGTATAGCTGGGCAAGTCTTGTAATATGCACCTTTCTTTaGGACAGTCCTCCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAEHGPCSHQGYSWASLVICTFL*DSPPCL Trigger: CAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATAT...TACAAGACTTGCCCAGCTATACCCTTGGTGAGAGCAGGGGCCATGTTCTGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 |
||
| CDS TCA 90 bp | CCGGGATGCACACAGCATTGTGGGTCTTGTTCCCAGGGAACATGGTaGGAAATCCAAACTGAGAACAGTTGGTCCAAAGTCTGCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGCTQHCGSCSQGTW*EIQTENSWSKVCSD Trigger: GTCACTGCAGACTTTGGACCAACTGTTCTCAGTTTGGATTTCTCACCATGTTCCCTGGGAACAAGACCCACAATGCTGTGTGCATCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGCCACTTCCGCCACTGTaGAGGGGAGCAGGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQVFILVQDLVLNVVLLVPLPPL*RGAGPG Trigger: GCCTGGCCCTGCTCCCCTCAACAGTGGCGGAAGTGG...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | GTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCACTTGTAGCGTCTGGCTaGGGGCACAGAGGAAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: VFILVQDLVLNVVLLVGPLVASG*GHRGRP Trigger: TGGTCTTCCTCTGTGCCCCAAGCCAGACGCTACAAG...TGGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | AGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCCCTTTGGACAGTCCTCCTaGCCTGGAGCATACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIYSCTRSCAKRGALGGPFGQSS*PGAYRL Trigger: CAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAA...GGGCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGCACAGCATTGTGGGTCTaGTTCCCAGGGAACATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVFILVQDLVLNVVLLVGTALWV*FPGNMV Trigger: CACCATGTTCCCTGGGAACAAGACCCACAATGCTGT...GCCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CAA 90 bp | AGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGGATGCACACAGCATaGTGGGTCTTGTTCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RQVFILVQDLVLNVVLLVGMHTA*WVLFPG Trigger: CCCTGGGAACAAGACCCACAATGCTGTGTGCATCCC...CACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CAA 90 bp | ACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGGTGGGACAGCATTGTGGGTCTaGTTCCCAGGGAACATGGTG | + |
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Preference number: 5 (lower is better) Translates to: TSIYSCTRSCAKRGALGGTALWV*FPGNMV Trigger: CACCATGTTCCCTGGGAACAAGACCCACAATGCTGT...CCCACCAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CAA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGAGTCAAATGGCCGTATaGCTCAGTGGGCAGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TRQVFILVQDLVLNVVLLSQMAV*LSGQWL Trigger: GAGCCACTGCCCACTGAGCAATACGGCCATTTGACT...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CAA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGTCGAGGACACATGTGTaGCCTCCTCAGCTGCCATAT | + |
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Preference number: 5 (lower is better) Translates to: TRQVFILVQDLVLNVVLLSRTHV*PPQLPY Trigger: ATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGA...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS-3UTR CAA 90 bp | ACTAGACAAGTATTTATTCTTGTACAAGATCTTGTGCTAAACGTGGTGCTCTTGATATGCACCTTTCTTTaGGACAGTCCTCCTTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TRQVFILVQDLVLNVVLLICTFL*DSPPCL Trigger: CAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATAT...CAAGAGCACCACGTTTAGCACAAGATCTTGTACAAGAATAAATACTTGTCTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 72 bp | TCTGCTCCCCGCGTTCCTCCTCAGGGAACTGGAAGCTaGAAGCATCCTCAGCTGACAACTGCACCTCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: SAPRVPPQGTGS*KHPQLTTAPPR Trigger: TCGCGGAGGTGCAGTTGTCAGCTGAGGATGCTTGCAGCTTCCAGTTCCCTGAGGAGGAACGCGGGGAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 72 bp | CTCCGCGAATGGCTGGGTCTCTCGAGGACACATGTGTaGCCTCCTCAGCTGCCATATGTGCAGGCCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LREWLGLSRTHV*PPQLPYVQAEL Trigger: CAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGAGAGACCCAGCCATTCGCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS CAA 90 bp | CAACTGCACCTCCGCGAATGGCTGGGTCTCTCGAGGACACATGTGTaGCCTCCTCAGCTGCCATATGTGCAGGCCGAGCTGGACTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: QLHLREWLGLSRTHV*PPQLPYVQAELDCG Trigger: ACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGAGAGACCCAGCCATTCGCGGAGGTGCAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS TCA 72 bp | AGGCTGCAGCAGCGAGTGTTGTTGCCACTTCCGTTCTaGACCTTGCCAGGGCCACAGCCAGGCTCCTCAACT | + |
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Preference number: 6 (lower is better) Translates to: RLQQRVLLPLPF*TLPGPQPGSST Trigger: AGTTGAGGAGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAACAACACTCGCTGCTGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | GCATCCTCAGCTGACAACTGCACCTCCGCGAATGGCTaGGTCTCTCGAGGACACATGTGTTGCCTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASSADNCTSANG*VSRGHMCCLLS Trigger: GCTGAGGAGGCAACACATGTGTCCTCGAGAGACCCAGCCATTCGCGGAGGTGCAGTTGTCAGCTGAGGATGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103173.10 |
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| CDS CAA 90 bp | GCCCATGGCACAGGCAACACACCGGAAGCCAAACACAATATCCCCTaGAGACTCCACCCTCTGGCCTGGTTGGCAGGGGTAGTGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: AHGTGNTPEAKHNIP*RLHPLAWLAGVVLA Trigger: TGCAAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTTTGGCTTCCGGTGTGTTGCCTGTGCCATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 72 bp | AGCAGCGAGTGTTGTTGCCACTTCCGTTCTGAACCTTaGCAGGGCCACAGCCAGGCTCCTCAACTACACTCG | + |
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Preference number: 6 (lower is better) Translates to: SSECCCHFRSEP*QGHSQAPQLHS Trigger: CGAGTGTAGTTGAGGAGCCTGGCTGTGGCCCTGGCAAGGTTCAGAACGGAAGTGGCAACAACACTCGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS GCA 72 bp | AAAGTCTGCAGTGACCGTCACGACCTGCGGAGAAGGTaGCCATGGCACAGGCAACACACCGGAAGCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: KVCSDRHDLRRR*PWHRQHTGSQT Trigger: TGTTTGGCTTCCGGTGTGTTGCCTGTGCCATGGGCACCTTCTCCGCAGGTCGTGACGGTCACTGCAGACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 90 bp | ATTTTCCCCTTCCCTGGGACACAACTGACCTCGAGGACACATGTGTaGCCTCCTCAGCTGCCATATGTGCAGGCCGAGCTGGACTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IFPFPGTQLTSRTHV*PPQLPYVQAELDCG Trigger: ACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCCTCGAGGTCAGTTGTGTCCCAGGGAAGGGGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
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| CDS GCA 72 bp | GCCATGACCAGGAAGATGACAGTCAAATGGCCGTATTaGTCAGTGGGCAGTGGCTCCGGGATGCACACAGCA | + |
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Preference number: 6 (lower is better) Translates to: AMTRKMTVKWPY*SVGSGSGMHTA Trigger: TGCTGTGTGCATCCCGGAGCCACTGCCCACTGAGCAATACGGCCATTTGACTGTCATCTTCCTGGTCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 72 bp | ACAGGCAACACACCGGAAGCCAAACACAATATCCCCTaGAGACTCCACCCTCTGGCCTGGTTGGCAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TGNTPEAKHNIP*RLHPLAWLAGV Trigger: TACCCCTGCCAACCAGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTTTGGCTTCCGGTGTGTTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 72 bp | AGCCATGACCAGGAAGATGACAGTCAAATGGCCGTATaGCTCAGTGGGCAGTGGCTCCGGGATGCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: SHDQEDDSQMAV*LSGQWLRDAHS Trigger: GCTGTGTGCATCCCGGAGCCACTGCCCACTGAGCAATACGGCCATTTGACTGTCATCTTCCTGGTCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 90 bp | GAAGCCAAACACAATATCCCCTTGAGACTCCACCCTCTGGCCTGGTaGGCAGGGGTAGTGCTTGCAGATCTTGCACTGAGGGTCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: EAKHNIPLRLHPLAW*AGVVLADLALRVST Trigger: TGTGGAGACCCTCAGTGCAAGATCTGCAAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTTTGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | TCAGTGGGCAGTGGCTCCGGGATGCACACAGCATTGTaGGTCTTGTTCCCAGGGAACATGGTGAGAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SVGSGSGMHTAL*VLFPGNMVRNP Trigger: TGGATTTCTCACCATGTTCCCTGGGAACAAGACCCACAATGCTGTGTGCATCCCGGAGCCACTGCCCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | GCATCCTCAGCTGACAACTGCACCTCCGCGAATGGCTaGGTCTCTGTAGTAAAACTGCGTGCGGTAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ASSADNCTSANG*VSVVKLRAVSE Trigger: CTCACTTACCGCACGCAGTTTTACTACAGAGACCCAGCCATTCGCGGAGGTGCAGTTGTCAGCTGAGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122001.3 |
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| CDS GCA 72 bp | CGAGGACACATGTGTTGCCTCCTCAGCTGCCATATGTaGAGGCCGAGCTGGACTGTGGTTAGGAAGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: RGHMCCLLSCHM*RPSWTVVRKKM Trigger: CATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACACATGTGTCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | AAACACAATATCCCCTTGAGACTCCACCCTCTGGCCTaGTTGGCAGGGGTAGTGCTTGCAGATCTTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: KHNIPLRLHPLA*LAGVVLADLAL Trigger: CAGTGCAAGATCTGCAAGCACTACCCCTGCCAACCAGGCCAGAGGGTGGAGTCTCAAGGGGATATTGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | GATGACAGTCAAATGGCCGTATTGCTCAGTGGGCAGTaGCTCCGGGATGCACACAGCATTGTGGGTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: DDSQMAVLLSGQ*LRDAHSIVGLV Trigger: AACAAGACCCACAATGCTGTGTGCATCCCGGAGCCACTGCCCACTGAGCAATACGGCCATTTGACTGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | TGTTGCCTCCTCAGCTGCCATATGTGCAGGCCGAGCTaGACTGTGGTTAGGAAGAAAATGCATGCAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: CCLLSCHMCRPS*TVVRKKMHAAM Trigger: CATGGCTGCATGCATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGCACATATGGCAGCTGAGGAGGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CAA 72 bp | GTGACACATATGCACCTTTCTTTTGGACAGTCCTCCTaGCCTGGAGCATACAGGCTGCAGCAGCGAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VTHMHLSFGQSS*PGAYRLQQRVL Trigger: CAACACTCGCTGCTGCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATATGTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS CCA 72 bp | GTGGTACTCAGGTGTGACACATATGCACCTTTCTTTTaGACAGTCCTCCTTGCCTGGAGCATACAGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VVLRCDTYAPFF*TVLLAWSIQAA Trigger: TGCAGCCTGTATGCTCCAGGCAAGGAGGACTGTCCAAAAGAAAGGTGCATATGTGTCACACCTGAGTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS TCA 72 bp | TCTTGCACTGAGGGTCTCCACAGTGGTACTCAGGTGTaGCACATATGCACCTTTCTTTTGGACAGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCTEGLHSGTQV*HICTFLLDSPP Trigger: AGGAGGACTGTCCAAAAGAAAGGTGCATATGTGTCACACCTGAGTACCACTGTGGAGACCCTCAGTGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040274.13 ENSMUST00000103173.10 ENSMUST00000122001.3 |
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| CDS TCA 72 bp | ACACAGCATTGTGGGTCTTGTTCCCAGGGAACATGGTaGGAAATCCAAACTGAGAACAGTTGGTCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: TQHCGSCSQGTW*EIQTENSWSKV Trigger: GACTTTGGACCAACTGTTCTCAGTTTGGATTTCTCACCATGTTCCCTGGGAACAAGACCCACAATGCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103173.10 ENSMUST00000122001.3 |
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