Pregenerated sensors for TNFRSF14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042333Ensembl transcript IDs: ENSMUST00000123514.8, ENSMUST00000137803.8, ENSMUST00000145296.2, ENSMUST00000152687.8, ENSMUST00000219534.3
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATaGAAACTTCCCACCAACGTCTCCTCGGTGTCTTGTCACCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VMMNQPGHLPCPNSI*KLPTNVSSVSCHPE Trigger: TTCTGGGTGACAAGACACCGAGGAGACGTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATTGTCCCAATAGCATATaGAAACTTCCCACCAACGTC | + |
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Preference number: 2 (lower is better) Translates to: KATPRPWAMTTYPLLCDDCPNSI*KLPTNV Trigger: GACGTTGGTGGGAAGTTTCCATATGCTATTGGGACA...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| 3UTR CCA 72 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATaGAAACTTCCCACCAACGTCTCCTCGGTGTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: NQPGHLPCPNSI*KLPTNVSSVSC Trigger: ACAAGACACCGAGGAGACGTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| 3UTR TCA 72 bp | AAAAGAATGGCAAAGCAACTCCTAGACCCTGGGCCATaGCCACATATCCACTGTTGTGTGATGATGAACCAG | + |
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Preference number: 3 (lower is better) Translates to: KRMAKQLLDPGP*PHIHCCVMMNQ Trigger: CTGGTTCATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTTGCCATTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATGGCCTGGCTCCAGGGTaGCGACCCCCATCCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDGLAPG*RPPSWE Trigger: CTCCCAGGATGGGGGTCGGCACCCTGGAGCCAGGCC...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR TCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACCTCCTCCTGTCTGCATaGGGGCTGGGCAGAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNLLLSA*GLGRDA Trigger: CGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAG...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCAGCTGGAGCACTCCTaGCAGGTCAGCAGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSQLEHS*QVSRPM Trigger: CATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCTCTACCCTCTGCCCTaGAGGGCAGGTGGTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSLYPLP*RAGGVL Trigger: CAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACGGCGGTATATGTCTGTaGGGGACAGGGGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNGGICL*GTGGTH Trigger: GTGTGTGCCCCCTGTCCCCCACAGACATATACCGCC...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCCTGGGAGGAGCAGGTaGTGTCTGTGCTGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSPGRSR*CLCCWS Trigger: GGACCAACAGCACAGACACCACCTGCTCCTCCCAGG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCGGAACTCCTCCTGTCTaGATGAGGGCTGGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSGTPPV*MRAGQR Trigger: TCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCC...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCGCAGGGCAGACACTTaGTCAGGCCATTTGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSRRADT*SGHLHG Trigger: CCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACGGAGGGCAGGTGGTGTaGTGCAAGCATGTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNGGQVV*CKHVEQ Trigger: CTGTTCCACATGCTTGCAGCACACCACCTGCCCTCC...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATGCCCTGGAGGGCAGGTaGTGTGCTGCAAGCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDALEGR*CAASMW Trigger: CCACATGCTTGCAGCACACCACCTGCCCTCCAGGGC...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGCCTTGGCCACTGAGCTaGTGTGCAGGTGTCTTCGCG | + |
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Preference number: 4 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWPWPLS*CAGVFA Trigger: CGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGG...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCCTGTTGAAATGCACTaGAGTTGGTCCAGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSPVEMH*SWSRAG Trigger: GCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACAGGGCTGGGCAGAGATaGGCTGCAGCAAGTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNRAGQR*AAASSK Trigger: TTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCT...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGCATGGTAACCTGGGTTaGACATGGGGCAGCACTCGT | + |
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Preference number: 4 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWHGNLG*TWGSTR Trigger: ACGAGTGCTGCCCCATGTGCAACCCAGGTTACCATG...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCAGCAGGTGGTGTCTGTaGTGTTGGTCCCACGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSSRWCL*CWSHVL Trigger: TAAGACGTGGGACCAACAGCACAGACACCACCTGCT...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACGAAATGCACTGCAGTTaGTCCAGGGCAGGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNEMHCS*SRAGIP Trigger: AGGAATGCCTGCCCTGGACCAACTGCAGTGCATTTC...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATAAGGCTCCAGCTCCTTaGCCACTGAGCTGGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDKAPAP*PLSWCA Trigger: TGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTT...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACTGCCTGTATGCTCACTaGAGACCTGCTTCACATGGT | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNCLYAH*RPASHG Trigger: ACCATGTGAAGCAGGTCTGCAGTGAGCATACAGGCA...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGAAACTTCCCACCAACCTCACAGAAGTAGCCTaGGATGCATCTGCACACAGT | + |
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Preference number: 4 (lower is better) Translates to: NQPGHLPCPNSIWKLPTNLTEVA*DASAHS Trigger: ACTGTGTGCAGATGCATCCCAGGCTACTTCTGTGAG...GTTGGTGGGAAGTTTCCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATTTCTCCTGTTGTTCCTaGTGGAAAGGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDFSCCS*WKGSSS Trigger: GGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGAA...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGTGGTGTCTGTGCTGTTaGTCCCACGTCTTACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWWCLCC*SHVLLP Trigger: AGGAAGTAAGACGTGGGACCAACAGCACAGACACCA...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATTCCTGTTGTTCCTGCTaGAAAGGCTCCAGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDSCCSC*KGSSSL Trigger: CAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGA...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR GCA 90 bp | CACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATACTTCCTGTTGAAATaGACTGCAGTTGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HCCVMMNQPGHLPCPNSIYFLLK*TAVGPG Trigger: CCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTA...TATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATTCCCACTATCACAAGTaGCAAAAGGATGGACACAAC | + |
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Preference number: 4 (lower is better) Translates to: KATPRPWAMTTYPLLCDDSHYHK*QKDGHN Trigger: GTTGTGTCCATCCTTTTGCCACTTGTGATAGTGGGA...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS GCA 90 bp | CCTGGGATGCATCTGCACACAGTGTCCTTCCAGCTGGAGCACTCCTaGCAGGTCAGCAGGCCCATGTCTGGATCACAGACTCCGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PGMHLHTVSFQLEHS*QVSRPMSGSQTPQG Trigger: GCCCTGCGGAGTCTGTGATCCAGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | GGTCGTGAGTCCCTCTCTTCTCTACCCTCTGCCCTGGAGGGCAGGTaGTGTGCTGCAAGCATGTGGAACAGTGGCTCCCATCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRESLSSLPSALEGR*CAASMWNSGSHPGS Trigger: AGAACCAGGATGGGAGCCACTGTTCCACATGCTTGCAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAGAAGAGAGGGACTCACGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | TACAGTGTCCTGGTCGTGAGTCCCTCTCTTCTCTACCCTCTGCCCTaGAGGGCAGGTGGTGTGCTGCAAGCATGTGGAACAGTGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: YSVLVVSPSLLYPLP*RAGGVLQACGTVAP Trigger: GGGAGCCACTGTTCCACATGCTTGCAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAGAAGAGAGGGACTCACGACCAGGACACTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS TCA 90 bp | GAGAAGGTCCCTGTTAGGCAGTCAGCACATACAGTGTCCTGGTCGTaGGTCCCTCTCTTCTCTACCCTCTGCCCTGGAGGGCAGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: EKVPVRQSAHTVSWS*VPLFSTLCPGGQVV Trigger: CACCACCTGCCCTCCAGGGCAGAGGGTAGAGAAGAGAGGGACTCACGACCAGGACACTGTATGTGCTGACTGCCTAACAGGGACCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS GCA 90 bp | GTCTGGATCACAGACTCCGCAGGGCAGACACTTGCTCAGGCCATTTaGATGGGCGGTATATGTCTGTGGGGGACAGGGGGCACACACTGT | + |
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Preference number: 5 (lower is better) Translates to: VWITDSAGQTLAQAI*MGGICLWGTGGTHC Trigger: ACAGTGTGTGCCCCCTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGGAGTCTGTGATCCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS GCA 90 bp | GTCCCTCTCTTCTCTACCCTCTGCCCTGGAGGGCAGGTGGTGTGCTaGAAGCATGTGGAACAGTGGCTCCCATCCTGGTTCTCACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPLFSTLCPGGQVVC*KHVEQWLPSWFSQK Trigger: CTTCTGTGAGAACCAGGATGGGAGCCACTGTTCCACATGCTTGCAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAGAAGAGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | GGGCAGACACTTGCTCAGGCCATTTGCATGGGCGGTATATGTCTGTaGGGGACAGGGGGCACACACTGTGCCTGTATGCTCACTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GQTLAQAICMGGICL*GTGGTHCACMLTAD Trigger: GTCTGCAGTGAGCATACAGGCACAGTGTGTGCCCCCTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | TCTCTACCCTCTGCCCTGGAGGGCAGGTGGTGTGCTGCAAGCATGTaGAACAGTGGCTCCCATCCTGGTTCTCACAGAAGTAGCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SLPSALEGRWCAASM*NSGSHPGSHRSSLG Trigger: TCCCAGGCTACTTCTGTGAGAACCAGGATGGGAGCCACTGTTCCACATGCTTGCAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | CACAGAAGTAGCCTGGGATGCATCTGCACACAGTGTCCTTCCAGCTaGAGCACTCCTGCCAGGTCAGCAGGCCCATGTCAGCCTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: HRSSLGCICTQCPSS*STPARSAGPCQPEG Trigger: ACCTTCAGGCTGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCTACTTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152687.8 |
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| CDS GCA 90 bp | TGCACATGGGGCAGCACTCGTCTCCCACAAGGAACTCCTCCTGTCTaGATGAGGGCTGGGCAGAGATGCGCTGCAGCAAGTTCAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: CTWGSTRLPQGTPPV*MRAGQRCAAASSKG Trigger: TCCTTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCCTTGTGGGAGACGAGTGCTGCCCCATGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | CACAGAAGTAGCCTGGGATGCATCTGCACACAGTGTCCTTCCAGCTaGAGCACTCCTGCCAGGTCAGCAGGCCCATGTCTGGATCACAGA | + |
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Preference number: 5 (lower is better) Translates to: HRSSLGCICTQCPSS*STPARSAGPCLDHR Trigger: TCTGTGATCCAGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCTACTTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS GCA 90 bp | GGTGGTGTCTGTGCTGTTGGTCCCACGTCTTACTTCCTGTTGAAATaGACTGCAGTTGGTCCAGGGCAGGCATTCCTCCTGAGTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGVCAVGPTSYFLLK*TAVGPGQAFLLSPS Trigger: GGAGGGACTCAGGAGGAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | CAGCACTCGTCTCCCACAAGGAACTCCTCCTGTCTGCATGAGGGCTaGGCAGAGATGCGCTGCAGCAAGTTCAAAAGGAAGACACAAGGC | + |
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Preference number: 5 (lower is better) Translates to: QHSSPTRNSSCLHEG*AEMRCSKFKRKTQG Trigger: GCCTTGTGTCTTCCTTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCCTTGTGGGAGACGAGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS CCA 90 bp | GGAGGCTGTCTCCTCCTCGGTCTCAGCAAACCCAACCTCGGTGACTaGAAACCTGATGGTGTTCTCCTGTTGTTCCTGGAAAGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GGCLLLGLSKPNLGD*KPDGVLLLFLERLQ Trigger: CTGGAGCCTTTCCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGTTGGGTTTGCTGAGACCGAGGAGGAGACAGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123514.8 |
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| CDS CCA 90 bp | ACCTCGGTGACTGGAAACCTGATGGTGTTCTCCTGTTGTTCCTGCTaGAAAGGCTCCAGCTCCTTGGCCACTGAGCTGGTGTGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: TSVTGNLMVFSCCSC*KGSSSLATELVCRC Trigger: ACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS CCA 90 bp | GGAGGCTGTCTCCTCCTCGGTCTCAGCAAACCCAACCTCGGTGACTaGAAACCTGATGGTGTTCTCCTGTTGTTCCTGCTGGAAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GGCLLLGLSKPNLGD*KPDGVLLLFLLERL Trigger: GAGCCTTTCCAGCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGTTGGGTTTGCTGAGACCGAGGAGGAGACAGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS TCA 90 bp | GCTCCTTGGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTGCAGATaGGGAATCCAGCTATCCCAGCTCCCACTATCACAAGTGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: APWPLSWCAGVFACR*GIQLSQLPLSQVAK Trigger: TTTTGCCACTTGTGATAGTGGGAGCTGGGATAGCTGGATTCCTCATCTGCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS GCA 90 bp | ACAAGGAACTCCTCCTGTCTGCATGAGGGCTGGGCAGAGATGCGCTaGAGCAAGTTCAAAAGGAAGACACAAGGCACCAGCCTGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRNSSCLHEGWAEMR*SKFKRKTQGTSLKV Trigger: CACCTTCAGGCTGGTGCCTTGTGTCTTCCTTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
||
| CDS CCA 90 bp | TATGCTCACTGCAGACCTGCTTCACATGGTAACCTGGGTTGCACATaGGGCAGCACTCGTCTCCCACAAGGAACTCCTCCTGTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: YAHCRPASHGNLGCT*GSTRLPQGTPPVCM Trigger: CATGCAGACAGGAGGAGTTCCTTGTGGGAGACGAGTGCTGCCCCATGTGCAACCCAGGTTACCATGTGAAGCAGGTCTGCAGTGAGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
||
| CDS-3UTR CAA 90 bp | ATCCACTGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCCCGCAGGGCAGACACTaGCTCAGGCCATTTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: IHCCVMMNQPGHLPCPNSPQGRH*LRPFAW Trigger: CCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGG...GCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACAGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS GCA 90 bp | TGTCTGTGCTGTTGGTCCCACGTCTTACTTCCTGTTGAAATGCACTaGAGTTGGTCCAGGGCAGGCATTCCTCCTGAGTCCCTCCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLCCWSHVLLPVEMH*SWSRAGIPPESLQV Trigger: CACTTGGAGGGACTCAGGAGGAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS CCA 90 bp | TGCTGTTGGTCCCACGTCTTACTTCCTGTTGAAATGCACTGCAGTTaGTCCAGGGCAGGCATTCCTCCTGAGTCCCTCCAAGTGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCWSHVLLPVEMHCS*SRAGIPPESLQVRR Trigger: CCTTCTCACTTGGAGGGACTCAGGAGGAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS GCA 90 bp | TGGACACAACGTAGTAGACGACCTGGGAGGAGCAGGTGGTGTCTGTaGTGTTGGTCCCACGTCTTACTTCCTGTTGAAATGCACTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WTQRSRRPGRSRWCL*CWSHVLLPVEMHCS Trigger: ACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACCACCTGCTCCTCCCAGGTCGTCTACTACGTTGTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCAACTCCTAGACCCTGGGCCATGACCACATATCCACTGTTGTGTGATGATACCAGCCTGAAGGTGTaGTCTGTAGGGGCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KATPRPWAMTTYPLLCDDTSLKV*SVGAWL Trigger: GAGCCAGGCCCCTACAGACAACACCTTCAGGCTGGT...ATCATCACACAACAGTGGATATGTGGTCATGGCCCAGGGTCTAGGAGTTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGGTGGTGTCTGTGCTGTaGGTCCCACGTCTTACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWVVSVL*VPRLTS Trigger: GGAAGTAAGACGTGGGACCAACAGCACAGACACCAC...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGGATGGTGTTCTCCTGTaGTTCCTGCTGGAAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWDGVLL*FLLERL Trigger: GAGCCTTTCCAGCAGGAACAACAGGAGAACACCATC...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGTGATGATGAACCAGCCAGGGCATCTGCCATGTCCCAATAGCATATGGACGTCTTACTTCCTGTaGAAATGCACTGCAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCVMMNQPGHLPCPNSIWTSYFL*KCTAVG Trigger: ACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGT...CCATATGCTATTGGGACATGGCAGATGCCCTGGCTGGTTCATCATCACACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS CAA 72 bp | CTGCCAGGTCAGCAGGCCCATGTCAGCCTGAAGGTGTaGTCTGTAGGGGCCTGGCTCCAGGGTGCCGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGQQAHVSLKV*SVGAWLQGADP Trigger: GGGGTCGGCACCCTGGAGCCAGGCCCCTACAGACAACACCTTCAGGCTGACATGGGCCTGCTGACCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152687.8 |
||
| CDS CCA 72 bp | CAAGGCACCAGCCTGAAGGTGTTGTCTGTAGGGGCCTaGCTCCAGGGTGCCGACCCCCATCCTGGGAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGTSLKVLSVGA*LQGADPHPGRG Trigger: ACCTCTCCCAGGATGGGGGTCGGCACCCTGGAGCCAGGCCCCTACAGACAACACCTTCAGGCTGGTGCCTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | ACTCCGCAGGGCAGACACTTGCTCAGGCCATTTGCATaGGCGGTATATGTCTGTGGGGGACAGGGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TPQGRHLLRPFA*AVYVCGGQGAH Trigger: GTGTGCCCCCTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | AGCCTGGGATGCATCTGCACACAGTGTCCTTCCAGCTaGAGCACTCCTGCCAGGTCAGCAGGCCCATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGCICTQCPSS*STPARSAGPCL Trigger: CAGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | AGCCTGGGATGCATCTGCACACAGTGTCCTTCCAGCTaGAGCACTCCTGCCAGGTCAGCAGGCCCATGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLGCICTQCPSS*STPARSAGPCQ Trigger: CTGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152687.8 |
||
| CDS GCA 72 bp | TTCTCTACCCTCTGCCCTGGAGGGCAGGTGGTGTGCTaGAAGCATGTGGAACAGTGGCTCCCATCCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSTLCPGGQVVC*KHVEQWLPSWF Trigger: GAACCAGGATGGGAGCCACTGTTCCACATGCTTGCAGCACACCACCTGCCCTCCAGGGCAGAGGGTAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 72 bp | TCTCCTGTTGTTCCTGCTGGAAAGGCTCCAGCTCCTTaGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPVVPAGKAPAP*PLSWCAGVFAC Trigger: GCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS CAA 72 bp | TTCAAAAGGAAGACACAAGGCACCAGCCTGAAGGTGTaGTCTGTAGGGGCCTGGCTCCAGGGTGCCGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: FKRKTQGTSLKV*SVGAWLQGADP Trigger: GGGGTCGGCACCCTGGAGCCAGGCCCCTACAGACAACACCTTCAGGCTGGTGCCTTGTGTCTTCCTTTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS CAA 90 bp | TGTCTGGATCACAGACTCCGCAGGGCAGACACTTGCTCAGGCCATTaGCATGGGCGGTATATGTCTGTGGGGGACAGGGGGCACACACTG | + |
|
Preference number: 6 (lower is better) Translates to: CLDHRLRRADTCSGH*HGRYMSVGDRGHTL Trigger: CAGTGTGTGCCCCCTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGGAGTCTGTGATCCAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CAA 90 bp | GTCAGCAGGCCCATGTCTGGATCACAGACTCCGCAGGGCAGACACTaGCTCAGGCCATTTGCATGGGCGGTATATGTCTGTGGGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VSRPMSGSQTPQGRH*LRPFAWAVYVCGGQ Trigger: CTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGGAGTCTGTGATCCAGACATGGGCCTGCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS TCA 72 bp | GCACTCGTCTCCCACAAGGAACTCCTCCTGTCTGCATaGGGGCTGGGCAGAGATGCGCTGCAGCAAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALVSHKELLLSA*GLGRDALQQVQ Trigger: TTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCCTTGTGGGAGACGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS TCA 72 bp | CCTGTTAGGCAGTCAGCACATACAGTGTCCTGGTCGTaGGTCCCTCTCTTCTCTACCCTCTGCCCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVRQSAHTVSWS*VPLFSTLCPGG Trigger: CCCTCCAGGGCAGAGGGTAGAGAAGAGAGGGACTCACGACCAGGACACTGTATGTGCTGACTGCCTAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS TCA 72 bp | CTGTTGTTCCTGGAAAGGCTCCAGCTCCTTGGCCACTaGGCTGGTGTGCAGGTGTCTTCGCGTGCAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLFLERLQLLGH*AGVQVSSRADE Trigger: CTCATCTGCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGGAACAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 |
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| CDS TCA 72 bp | TTGTTCCTGCTGGAAAGGCTCCAGCTCCTTGGCCACTaGGCTGGTGTGCAGGTGTCTTCGCGTGCAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFLLERLQLLGH*AGVQVSSRADE Trigger: CTCATCTGCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS GCA 72 bp | GGGGACAGGGGGCACACACTGTGCCTGTATGCTCACTaGAGACCTGCTTCACATGGTAACCTGGGTTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: GDRGHTLCLYAH*RPASHGNLGCT Trigger: TGTGCAACCCAGGTTACCATGTGAAGCAGGTCTGCAGTGAGCATACAGGCACAGTGTGTGCCCCCTGTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS GCA 72 bp | CATCTGCACACAGTGTCCTTCCAGCTGGAGCACTCCTaGCAGGTCAGCAGGCCCATGTCTGGATCACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: HLHTVSFQLEHS*QVSRPMSGSQT Trigger: AGTCTGTGATCCAGACATGGGCCTGCTGACCTGGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CCA 72 bp | CTTGCTCAGGCCATTTGCATGGGCGGTATATGTCTGTaGGGGACAGGGGGCACACACTGTGCCTGTATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAQAICMGGICL*GTGGTHCACML Trigger: GAGCATACAGGCACAGTGTGTGCCCCCTGTCCCCCACAGACATATACCGCCCATGCAAATGGCCTGAGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CCA 72 bp | TGTTCTCCTGTTGTTCCTGGAAAGGCTCCAGCTCCTTaGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSPVVPGKAPAP*PLSWCAGVFAC Trigger: GCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGGAACAACAGGAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 |
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| CDS CAA 72 bp | GTGTTCTCCTGTTGTTCCTGGAAAGGCTCCAGCTCCTaGGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VFSCCSWKGSSS*ATELVCRCLRV Trigger: CACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGGAACAACAGGAGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 |
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| CDS CAA 72 bp | TTCTCCTGTTGTTCCTGCTGGAAAGGCTCCAGCTCCTaGGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSCCSCWKGSSS*ATELVCRCLRV Trigger: CACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS CAA 90 bp | AACCTGATGGTGTTCTCCTGTTGTTCCTGGAAAGGCTCCAGCTCCTaGGCCACTGAGCTGGTGTGCAGGTGTCTTCGCGTGCAGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NLMVFSCCSWKGSSS*ATELVCRCLRVQMR Trigger: CCTCATCTGCACGCGAAGACACCTGCACACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGGAACAACAGGAGAACACCATCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 |
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| CDS TCA 72 bp | AATGCACTGCAGTTGGTCCAGGGCAGGCATTCCTCCTaGGTCCCTCCAAGTGAGAAGGTCCCTGTTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NALQLVQGRHSS*VPPSEKVPVRQ Trigger: CTGCCTAACAGGGACCTTCTCACTTGGAGGGACTCAGGAGGAATGCCTGCCCTGGACCAACTGCAGTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS GCA 72 bp | TCCTCCTGTCTGCATGAGGGCTGGGCAGAGATGCGCTaGAGCAAGTTCAAAAGGAAGACACAAGGCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCLHEGWAEMR*SKFKRKTQGTS Trigger: GCTGGTGCCTTGTGTCTTCCTTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS GCA 72 bp | GCTCACTGCAGACCTGCTTCACATGGTAACCTGGGTTaGACATGGGGCAGCACTCGTCTCCCACAAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: AHCRPASHGNLG*TWGSTRLPQGT Trigger: AGTTCCTTGTGGGAGACGAGTGCTGCCCCATGTGCAACCCAGGTTACCATGTGAAGCAGGTCTGCAGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS GCA 72 bp | CATCCTGGTTCTCACAGAAGTAGCCTGGGATGCATCTaGACACAGTGTCCTTCCAGCTGGAGCACTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HPGSHRSSLGCI*TQCPSSWSTPA Trigger: GGCAGGAGTGCTCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCTACTTCTGTGAGAACCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 72 bp | TGCAGACCTGCTTCACATGGTAACCTGGGTTGCACATaGGGCAGCACTCGTCTCCCACAAGGAACTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRPASHGNLGCT*GSTRLPQGTPP Trigger: AGGAGGAGTTCCTTGTGGGAGACGAGTGCTGCCCCATGTGCAACCCAGGTTACCATGTGAAGCAGGTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
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| CDS CAA 90 bp | GGAGCAGGTGGTGTCTGTGCTGTTGGTCCCACGTCTTACTTCCTGTaGAAATGCACTGCAGTTGGTCCAGGGCAGGCATTCCTCCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GAGGVCAVGPTSYFL*KCTAVGPGQAFLLS Trigger: ACTCAGGAGGAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACCACCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS TCA 72 bp | CCACTGAGCTGGTGTGCAGGTGTCTTCGCGTGCAGATaGGGAATCCAGCTATCCCAGCTCCCACTATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PLSWCAGVFACR*GIQLSQLPLSQ Trigger: TTGTGATAGTGGGAGCTGGGATAGCTGGATTCCTCATCTGCACGCGAAGACACCTGCACACCAGCTCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | TCTCCCACAAGGAACTCCTCCTGTCTGCATGAGGGCTaGGCAGAGATGCGCTGCAGCAAGTTCAAAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPTRNSSCLHEG*AEMRCSKFKRK Trigger: CTTCCTTTTGAACTTGCTGCAGCGCATCTCTGCCCAGCCCTCATGCAGACAGGAGGAGTTCCTTGTGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000145296.2 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | ACAGTGGCTCCCATCCTGGTTCTCACAGAAGTAGCCTaGGATGCATCTGCACACAGTGTCCTTCCAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TVAPILVLTEVA*DASAHSVLPAG Trigger: TCCAGCTGGAAGGACACTGTGTGCAGATGCATCCCAGGCTACTTCTGTGAGAACCAGGATGGGAGCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | AGACGACCTGGGAGGAGCAGGTGGTGTCTGTGCTGTTaGTCCCACGTCTTACTTCCTGTTGAAATGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRPGRSRWCLCC*SHVLLPVEMHC Trigger: GCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACCACCTGCTCCTCCCAGGTCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | TGGACACAACGTAGTAGACGACCTGGGAGGAGCAGGTaGTGTCTGTGCTGTTGGTCCCACGTCTTACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WTQRSRRPGRSR*CLCCWSHVLLP Trigger: AGGAAGTAAGACGTGGGACCAACAGCACAGACACCACCTGCTCCTCCCAGGTCGTCTACTACGTTGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | GTGACTGGAAACCTGATGGTGTTCTCCTGTTGTTCCTaGAAAGGCTCCAGCTCCTTGGCCACTGAGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VTGNLMVFSCCS*KGSSSLATELV Trigger: CACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 |
||
| CDS CCA 72 bp | ACTGGAAACCTGATGGTGTTCTCCTGTTGTTCCTGCTaGAAAGGCTCCAGCTCCTTGGCCACTGAGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGNLMVFSCCSC*KGSSSLATELV Trigger: CACCAGCTCAGTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGAACACCATCAGGTTTCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS CCA 72 bp | CTCCTCCTCGGTCTCAGCAAACCCAACCTCGGTGACTaGAAACCTGATGGTGTTCTCCTGTTGTTCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLGLSKPNLGD*KPDGVLLLFLL Trigger: CAGCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGTTGGGTTTGCTGAGACCGAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
||
| CDS CAA 72 bp | CCCATGTCTGGATCACAGACTCCGCAGGGCAGACACTaGCTCAGGCCATTTGCATGGGCGGTATATGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PMSGSQTPQGRH*LRPFAWAVYVC Trigger: ACAGACATATACCGCCCATGCAAATGGCCTGAGCAAGTGTCTGCCCTGCGGAGTCTGTGATCCAGACATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000137803.8 ENSMUST00000219534.3 |
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| CDS CAA 72 bp | AACCTCGGTGACTGGAAACCTGATGGTGTTCTCCTGTaGTTCCTGCTGGAAAGGCTCCAGCTCCTTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: NLGDWKPDGVLL*FLLERLQLLGH Trigger: GTGGCCAAGGAGCTGGAGCCTTTCCAGCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219534.3 |
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| CDS TCA 72 bp | GTGTCTGTGCTGTTGGTCCCACGTCTTACTTCCTGTTaGAATGCACTGCAGTTGGTCCAGGGCAGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: VSVLLVPRLTSC*NALQLVQGRHS Trigger: GGAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS GCA 72 bp | CGTAGTAGACGACCTGGGAGGAGCAGGTGGTGTCTGTaGTGTTGGTCCCACGTCTTACTTCCTGTTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: RSRRPGRSRWCL*CWSHVLLPVEM Trigger: CATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACCACCTGCTCCTCCCAGGTCGTCTACTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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| CDS CCA 72 bp | CTCCTCCTCGGTCTCAGCAAACCCAACCTCGGTGACTaGAAACCTGATGGTGTTCTCCTGTTGTTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLLGLSKPNLGD*KPDGVLLLFLE Trigger: TTCCAGGAACAACAGGAGAACACCATCAGGTTTCCAGTCACCGAGGTTGGGTTTGCTGAGACCGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123514.8 |
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| CDS CAA 72 bp | GGTGTCTGTGCTGTTGGTCCCACGTCTTACTTCCTGTaGAAATGCACTGCAGTTGGTCCAGGGCAGGCATTC | + |
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Preference number: 6 (lower is better) Translates to: GVCAVGPTSYFL*KCTAVGPGQAF Trigger: GAATGCCTGCCCTGGACCAACTGCAGTGCATTTCAACAGGAAGTAAGACGTGGGACCAACAGCACAGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123514.8 ENSMUST00000152687.8 ENSMUST00000219534.3 |
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