Pregenerated sensors for TNFRSF11B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063727Ensembl transcript IDs: ENSMUST00000079772.4
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCAAATCAAATCTTTAGAGGGAAAAATAGCTAACAGTCAAGCTTaGCTAGCAACCTACAAAGGTGATGAGGCTCTGATAAGCATTATA | + |
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Preference number: 1 (lower is better) Translates to: TQIKSLEGKIANSQA*LATYKGDEALISII Trigger: TATAATGCTTATCAGAGCCTCATCACCTTTGTAGGTTGCTAGGCAAGCTTGACTGTTAGCTATTTTTCCCTCTAAAGATTTGATTTGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR CCA 90 bp | ACCAGACATGACAGCTGGATAAACTGTTGGGGATTTGTTGAATATTaGAGGAGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: TRHDSWINCWGFVEY*RRYQFFLHIVVSSG Trigger: ACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCTCCTCCAATATTCAACAAATCCCCAACAGTTTATCCAGCTGTCATGTCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGCTGGGCCGTTTCAAGTaGTTGAGAAACAGTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: IACLTLRTQSPQCVCWGWLGRFK*LRNSLL Trigger: AAGAAGACTGTTTCTCAAGCACTTGAAACGGCCCAG...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CCA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACAGCATGCTTGGCTTTCTaGGTATACACCTGGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: NVIDYQMQKETDLHLGVTACLAF*VYTWFY Trigger: ATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGC...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCCTCCTCAGTCAGTTTTaGCCCATCTTGAAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: FLGIHLVLYNYKIACLTLLLSQF*PILKKQ Trigger: CTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAG...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CAA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACATCTCACTCAGCATGCTaGGCTTTCTGGGTATACACC | + |
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Preference number: 3 (lower is better) Translates to: NVIDYQMQKETDLHLGVTSHSAC*AFWVYT Trigger: GGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGA...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR CCA 72 bp | TGCTTGAGAAACAGTCTTCTTCTCCTCAGTCAGTTTTaGCCCATCTTGAAGAAACAGCCCAGTGACCATTCC | + |
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Preference number: 3 (lower is better) Translates to: CLRNSLLLLSQF*PILKKQPSDHS Trigger: GGAATGGTCACTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTTCTCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR TCA 72 bp | CATGTGGTAATGAGAGGACACACAGTCTGTAGATACTaGACCAGACATGACAGCTGGATAAACTGTTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: HVVMRGHTVCRY*TRHDSWINCWG Trigger: TCCCCAACAGTTTATCCAGCTGTCATGTCTGGTTCAGTATCTACAGACTGTGTGTCCTCTCATTACCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR GCA 72 bp | CGACTGATGAGAAAGGAATCACTGGGCCGTTTCAAGTaGTTGAGAAACAGTCTTCTTCTCCTCAGTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: RLMRKESLGRFK*LRNSLLLLSQF Trigger: AAACTGACTGAGGAGAAGAAGACTGTTTCTCAAGCACTTGAAACGGCCCAGTGATTCCTTTCTCATCAGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CAA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAACAGTTTTGGCCCATCTaGAAGAAACAGCCCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: QMQKETDLHLGVTHKIVEQFWPI*KKQPSD Trigger: GTCACTGGGCTGTTTCTTCAAGATGGGCCAAAACTG...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTGGCCGTTTCAAGTGCTaGAGAAACAGTCTTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: CSHSACLAFWVYTWFYTIGRFKC*RNSLLL Trigger: GAGAAGAAGACTGTTTCTCAAGCACTTGAAACGGCC...AATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR GCA 72 bp | AAATCTTTAGAGGGAAAAATAGCTAACAGTCAAGCTTaGCTAGCAACCTACAAAGGTGATGAGGCTCTGATA | + |
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Preference number: 3 (lower is better) Translates to: KSLEGKIANSQA*LATYKGDEALI Trigger: TATCAGAGCCTCATCACCTTTGTAGGTTGCTAGGCAAGCTTGACTGTTAGCTATTTTTCCCTCTAAAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR-3UTR CAA 90 bp | AGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGTGCTATGAAACCAAGCTCTCCTCAGTCAGTTTaGGCCCATCTTGAAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RYQFFLHIVVSSGAMKPSSPQSV*AHLEET Trigger: TGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGA...GCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR CCA 72 bp | GAGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTaGTGCTATGAAACCAAGCCAGCCATTGTTAATGTA | + |
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Preference number: 3 (lower is better) Translates to: EISILSPYSSFF*CYETKPAIVNV Trigger: TACATTAACAATGGCTGGCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGGATGCCGCTGCACGCTaGTTTCACAGAGGTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: IACLTLRTQSPQCVCWGWDAAAR*FHRGQC Trigger: ACATTGACCTCTGTGAAAGCAGCGTGCAGCGGCATC...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGACACACACTCATCACTaGTGTGCCAGCTGTCCGTAT | + |
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Preference number: 4 (lower is better) Translates to: IACLTLRTQSPQCVCWGWTHTHH*CASCPY Trigger: ATACGGACAGCTGGCACACCAGTGATGAGTGTGTGT...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGTTCCACACTTTTGCGTaGCTTCTCTGTTTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: IACLTLRTQSPQCVCWGWFHTFA*LLCFRN Trigger: GTTCCGGAAACAGAGAAGCCACGCAAAAGTGTGGAA...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGTCTATTCCACACTTTTaGGTGGCTTCTCTGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: IACLTLRTQSPQCVCWGWSIPHF*VASLFP Trigger: CGGAAACAGAGAAGCCACGCAAAAGTGTGGAATAGA...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGTACATTGTGAAGCTGTaGAGGAACCTCATGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IACLTLRTQSPQCVCWGWYIVKL*RNLMVF Trigger: GAAGACCATGAGGTTCCTGCACAGCTTCACAATGTA...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGTCACACACTCGGTTGTaGGTGCGGTTGCACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KQSSSPQSVLAHLEETAQSHTRL*VRLHSC Trigger: GCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGA...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGTCCTGCTTCACGGACTaGAGTTCCTTGCACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: KQSSSPQSVLAHLEETAQSCFTD*SSLHTG Trigger: CCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGA...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAATGGCCGAGATGCCGCTaGACGCTGCTTTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVEWPRCR*TLLSQR Trigger: CCTCTGTGAAAGCAGCGTGCAGCGGCATCTCGGCCA...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAAACACTCGGTTGTGGGTaGGGTTGCACTCCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVETLGCG*GCTPAS Trigger: TGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGT...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACAGCTGCTCGCTCGATTTaGAGGTCTTTCTCGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NVIDYQMQKETDLHLGVTAARSI*RSFSFS Trigger: AGAGAACGAGAAAGACCTGCAAATCGAGCGAGCAGC...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGGTCTTCCTCAGACTGTaGGTGACAGTTTTGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KQSSSPQSVLAHLEETAQVFLRL*VTVLGK Trigger: CTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGAC...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAATCCTCAGACTGTGGGTaGCAGTTTTGGGAAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVESSDCG*QFWESG Trigger: CCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGA...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCCAGGAGCACCAGGAGTaGGCAGCACAGCCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FLGIHLVLYNYKIACLTLQEHQE*AAQPLV Trigger: AACAAGTGGCTGTGCTGCGCACTCCTGGTGCTCCTG...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACAGCTGTTTTAGGTAGGTaGCAGGAGCACATTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NVIDYQMQKETDLHLGVTAVLGR*QEHICH Trigger: GTGACAAATGTGCTCCTGGCACCTACCTAAAACAGC...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| 3UTR CAA 72 bp | CTGATGAGAAAGGAATCACTGGGCCGTTTCAAGTGCTaGAGAAACAGTCTTCTTCTCCTCAGTCAGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LMRKESLGRFKC*RNSLLLLSQFW Trigger: CCAAAACTGACTGAGGAGAAGAAGACTGTTTCTCAAGCACTTGAAACGGCCCAGTGATTCCTTTCTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | TTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTATCGGACTGCAGTTCCTTaGACACTGGGCTGCAATACA | + |
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Preference number: 4 (lower is better) Translates to: FSLSMLGFLGIHLVLYNYRTAVP*TLGCNT Trigger: TGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCG...ATAATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | AGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGTGCTATGAAACCAAGCGGTTGTGGGTGCGGTTaGACTCCTGCTTCACGGACT | + |
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Preference number: 4 (lower is better) Translates to: RYQFFLHIVVSSGAMKPSGCGCG*TPASRT Trigger: AGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACC...GCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAATCCTGGTCTCTGTTTTaGTGTTTCCACAGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVESWSLF*CFHSFS Trigger: GCTGAAGCTGTGGAAACATCAAAACAGAGACCAGGA...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAAGCAGGAGGCCAAATGTaGTGCAGTTCGTGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVEAGGQM*CSSCVL Trigger: TAAAACACACGAACTGCAGCACATTTGGCCTCCTGC...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | TTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTATAGCAGCTGGAAGGTTTaGTCTTGTGAGCTGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSLSMLGFLGIHLVLYNYSSWKV*SCELCL Trigger: GAGACACAGCTCACAAGAGCAAACCTTCCAGCTGCT...ATAATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAAGGAGGAAGGGTTTCCTaGGTTGTCCATTCAATGATG | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVEGGRVS*VVHSMM Trigger: CATCATTGAATGGACAACCCAGGAAACCCTTCCTCC...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | TTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTATTCTCGGCATTCACTTTaGTCCCAGGCAAACTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSLSMLGFLGIHLVLYNYSRHSL*SQANCP Trigger: TGGACAGTTTGCCTGGGACCAAAGTGAATGCCGAGA...ATAATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAACCTCTTCACACAGGGTaGCATCTATTCCACACTTTT | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVEPLHTG*HLFHTF Trigger: AAAAGTGTGGAATAGATGTCACCCTGTGTGAAGAGG...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR GCA 90 bp | TTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTATTCTTCCTCCTCACTGTaGAGTGCTGTTTTAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLSMLGFLGIHLVLYNYSSSSL*SAVLGR Trigger: CCTACCTAAAACAGCACTGCACAGTGAGGAGGAAGA...ATAATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCCAGTTCCTTGCACACTaGGCTGCAATACACACACTC | + |
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Preference number: 4 (lower is better) Translates to: FLGIHLVLYNYKIACLTLQFLAH*AAIHTL Trigger: GAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTG...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGAACACTCAGCCAATTTaGTATAATCTTGGTAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KQSSSPQSVLAHLEETAQNTQPI*YNLGRN Trigger: GTTCCTACCAAGATTATACCAAATTGGCTGAGTGTT...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | TGTTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTCCCTTCAAGGTGTCTTaGTCACCATTTTTGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: CSHSACLAFWVYTWFYTIPFKVS*SPFLIL Trigger: GAGGATCAAAAATGGTGACCAAGACACCTTGAAGGG...AATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAAGTTGCATTTCCTTTCTaGATTAGCAGGAGGCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVEVAFPF*ISRRPN Trigger: ATTTGGCCTCCTGCTAATTCAGAAAGGAAATGCAAC...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCACAGTCTGTACATTGTaGAGCTGTGCAGGAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: FLGIHLVLYNYKIACLTLTVCTL*SCAGTS Trigger: TGAGGTTCCTGCACAGCTTCACAATGTACAGACTGT...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | TTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTATGGTCAATGTCTTGGATaGTCTTCTTCACCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FSLSMLGFLGIHLVLYNYGQCLG*SSSPFP Trigger: AGGAAATGGTGAAGAAGATCATCCAAGACATTGACC...ATAATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAAACAGTTTTGGGAAAGTaGGATGTTTTCAAGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QMQKETDLHLGVTHKIVETVLGK*DVFKCL Trigger: CAAGCACTTGAAAACATCCCACTTTCCCAAAACTGT...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR TCA 90 bp | TGTTCTCACTCAGCATGCTTGGCTTTCTGGGTATACACCTGGTTTTATACAATTTCTAAAAAGAGCTTCTaGTACAGTCTGTACATTGTG | + |
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Preference number: 4 (lower is better) Translates to: CSHSACLAFWVYTWFYTISKKSF*YSLYIV Trigger: CACAATGTACAGACTGTATCAGAAGCTCTTTTTAGA...AATTGTATAAAACCAGGTGTATACCCAGAAAGCCAAGCATGCTGAGTGAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCATAATGCAAGTACTTTaGAGGAAGGGTTTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGIHLVLYNYKIACLTLIMQVL*RKGFLG Trigger: ACCCAGGAAACCCTTCCTCCAAAGTACTTGCATTAT...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CCA 90 bp | AGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGTGCTATGAAACCAAGCCTGATGACCAGTTTCTaGGTCATAATGCAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RYQFFLHIVVSSGAMKPSLMTSF*VIMQVL Trigger: AAGTACTTGCATTATGACCCAGAAACTGGTCATCAG...GCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | GGGCTGATCTTCTTCCCAGGCAGGCTCTCCATCAAGGCAAGAAGCTaGTCTGTGGTGAGGTTCGAGTGGCCGAGATGCCGCTGCACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLIFFPGRLSIKARS*SVVRFEWPRCRCTL Trigger: CAGCGTGCAGCGGCATCTCGGCCACTCGAACCTCACCACAGAGCAGCTTCTTGCCTTGATGGAGAGCCTGCCTGGGAAGAAGATCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | GGTAACGCCCTTCCTCACACTCACACACTCGGTTGTGGGTGCGGTTaGACTCCTGCTTCACGGACTGCAGTTCCTTGCACACTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GNALPHTHTLGCGCG*TPASRTAVPCTLGC Trigger: GCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAGGGCGTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | GGTTGTGGGTGCGGTTGCACTCCTGCTTCACGGACTGCAGTTCCTTaGACACTGGGCTGCAATACACACACTCATCACTGGTGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCGCGCTPASRTAVP*TLGCNTHTHHWCAS Trigger: GCTGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | TCTCCAGGTAACGCCCTTCCTCACACTCACACACTCGGTTGTGGGTaGGGTTGCACTCCTGCTTCACGGACTGCAGTTCCTTGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGNALPHTHTLGCG*GCTPASRTAVPCTL Trigger: CAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAGGGCGTTACCTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | GGTGCGGTTGCACTCCTGCTTCACGGACTGCAGTTCCTTGCACACTaGGCTGCAATACACACACTCATCACTGGTGTGCCAGCTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GAVALLLHGLQFLAH*AAIHTLITGVPAVR Trigger: ACGGACAGCTGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | CCTTCCTCACACTCACACACTCGGTTGTGGGTGCGGTTGCACTCCTaGTTCACGGACTGCAGTTCCTTGCACACTGGGCTGCAATACACA | + |
|
Preference number: 5 (lower is better) Translates to: PSSHSHTRLWVRLHS*FTDCSSLHTGLQYT Trigger: TGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | TCACACACTCGGTTGTGGGTGCGGTTGCACTCCTGCTTCACGGACTaGAGTTCCTTGCACACTGGGCTGCAATACACACACTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SHTRLWVRLHSCFTD*SSLHTGLQYTHSSL Trigger: CAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | GCAAGAAGCTGCTCTGTGGTGAGGTTCGAGTGGCCGAGATGCCGCTaGACGCTGCTTTCACAGAGGTCAATGTCTTGGATGATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARSCSVVRFEWPRCR*TLLSQRSMSWMIFF Trigger: GAAGAAGATCATCCAAGACATTGACCTCTGTGAAAGCAGCGTGCAGCGGCATCTCGGCCACTCGAACCTCACCACAGAGCAGCTTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | ACTGCAGTTCCTTGCACACTGGGCTGCAATACACACACTCATCACTaGTGTGCCAGCTGTCCGTATAAGAGTGGTCAGGGCAAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: TAVPCTLGCNTHTHH*CASCPYKSGQGKGH Trigger: GTGTCCCTTGCCCTGACCACTCTTATACGGACAGCTGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | ATAGCCTGCCTCACTCTCCGGACTCAGAGTCCCCAGTGTGTGTGTTGGGGGTGGTCTTGGTCACCATTTTaGATCCTCCATAAACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IACLTLRTQSPQCVCWGWSWSPF*ILHKLS Trigger: ACTCAGTTTATGGAGGATCAAAAATGGTGACCAAGA...CCACCCCCAACACACACACTGGGGACTCTGAGTCCGGAGAGTGAGGCAGGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | AAGAGTGGTCAGGGCAAGGGACACACAATGTCTTCCTCCTCACTGTaGAGTGCTGTTTTAGGTAGGTGCCAGGAGCACATTTGTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: KSGQGKGHTMSSSSL*SAVLGRCQEHICHT Trigger: TGTGTGACAAATGTGCTCCTGGCACCTACCTAAAACAGCACTGCACAGTGAGGAGGAAGACATTGTGTGTCCCTTGCCCTGACCACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | GGTGCCAGGAGCACATTTGTCACACAGGAGCTGATGACCAGTTTCTaGGTCATAATGCAAGTACTTTGGAGGAAGGGTTTCCTGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GARSTFVTQELMTSF*VIMQVLWRKGFLGC Trigger: ACAACCCAGGAAACCCTTCCTCCAAAGTACTTGCATTATGACCCAGAAACTGGTCATCAGCTCCTGTGTGACAAATGTGCTCCTGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGACGGACTGCAGTTCCTaGCACACTGGGCTGCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: KQSSSPQSVLAHLEETAQTDCSS*HTGLQY Trigger: GTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGT...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | AACCTCATGGTCTTCCTCAGACTGTGGGTGACAGTTTTGGGAAAGTaGGATGTTTTCAAGTGCTTGAGGGCATACATCAGGCCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NLMVFLRLWVTVLGK*DVFKCLRAYIRPFK Trigger: CTTGAAGGGCCTGATGTATGCCCTCAAGCACTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGACCATGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | ACACAGGAGCTGATGACCAGTTTCTGGGTCATAATGCAAGTACTTTaGAGGAAGGGTTTCCTGGGTTGTCCATTCAATGATGTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQELMTSFWVIMQVL*RKGFLGCPFNDVQE Trigger: CTCCTGGACATCATTGAATGGACAACCCAGGAAACCCTTCCTCCAAAGTACTTGCATTATGACCCAGAAACTGGTCATCAGCTCCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | TACATTGTGAAGCTGTGCAGGAACCTCATGGTCTTCCTCAGACTGTaGGTGACAGTTTTGGGAAAGTGGGATGTTTTCAAGTGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YIVKLCRNLMVFLRL*VTVLGKWDVFKCLR Trigger: CCTCAAGCACTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGACCATGAGGTTCCTGCACAGCTTCACAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCCGGTTGTGGGTGCGGTaGCACTCCTGCTTCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLGIHLVLYNYKIACLTLRLWVR*HSCFTD Trigger: GTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCG...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 90 bp | GTTTTCAAGTGCTTGAGGGCATACATCAGGCCCTTCAAGGTGTCTTaGTCACCATTTTTGATCCTCCATAAACTGAGTAGCTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFKCLRAYIRPFKVS*SPFLILHKLSSFRS Trigger: GCTCCTGAAGCTACTCAGTTTATGGAGGATCAAAAATGGTGACCAAGACACCTTGAAGGGCCTGATGTATGCCCTCAAGCACTTGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | CAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACATAAAATAGTAGAACTCTCGGCATTCACTTaGGTCCCAGGCAAACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QMQKETDLHLGVTHKIVELSAFT*VPGKLS Trigger: GGACAGTTTGCCTGGGACCAAAGTGAATGCCGAGAG...TTCTACTATTTTATGTGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACACTGTGGGTGACAGTTTaGGGAAAGTGGGATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVIDYQMQKETDLHLGVTLWVTV*GKWDVF Trigger: GAAAACATCCCACTTTCCCAAAACTGTCACCCACAG...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | CATGTGTTGCATTTCCTTTCTGAATTAGCAGGAGGCCAAATGTGCTaGAGTTCGTGTGTTTTATACAGGGTGCTTTCGATGAAGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HVLHFLSELAGGQMC*SSCVLYRVLSMKSH Trigger: GTGAGACTTCATCGAAAGCACCCTGTATAAAACACACGAACTGCAGCACATTTGGCCTCCTGCTAATTCAGAAAGGAAATGCAACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AAACAGTCTTCTTCTCCTCAGTCAGTTTTGGCCCATCTTGAAGAAACAGCCCAGCCATCTGGACATTTTTaGCAAACTGTGTTTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQSSSPQSVLAHLEETAQPSGHF*QTVFRS Trigger: AGAGCGAAACACAGTTTGCAAAAAATGTCCAGATGG...CTGGGCTGTTTCTTCAAGATGGGCCAAAACTGACTGAGGAGAAGAAGACTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AACGTCATAGACTATCAGATGCAGAAGGAAACAGACCTTCATCTAGGGGTGACATTTCCGGAACACACGTaGTCATGTGTTGCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NVIDYQMQKETDLHLGVTFPEHT*SCVAFP Trigger: AGGAAATGCAACACATGACAACGTGTGTTCCGGAAA...TGTCACCCCTAGATGAAGGTCTGTTTCCTTCTGCATCTGATAGTCTATGACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 90 bp | TGTCATGTGTTGCATTTCCTTTCTGAATTAGCAGGAGGCCAAATGTaGTGCAGTTCGTGTGTTTTATACAGGGTGCTTTCGATGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CHVLHFLSELAGGQM*CSSCVLYRVLSMKS Trigger: AGACTTCATCGAAAGCACCCTGTATAAAACACACGAACTGCAGCACATTTGGCCTCCTGCTAATTCAGAAAGGAAATGCAACACATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGTGCTATGAAACCAAGCGCCCTTCAAGGTGTCTaGGTCACCATTTTTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RYQFFLHIVVSSGAMKPSALQGV*VTIFDP Trigger: AGGATCAAAAATGGTGACCAAGACACCTTGAAGGGC...GCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGTATACACCTGGTTTTATACAATTATAAAATAGCCTGCCTCACTCTCACAGAGGTCAATGTCTaGGATGATCTTCTTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLGIHLVLYNYKIACLTLTEVNV*DDLLHH Trigger: ATGGTGAAGAAGATCATCCAAGACATTGACCTCTGT...GAGAGTGAGGCAGGCTATTTTATAATTGTATAAAACCAGGTGTATACCCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS-3UTR CAA 90 bp | AGATATCAATTCTTTCTCCATATAGTAGTTTCTTCTGGTGCTATGAAACCAAGCACACGTTGTCATGTGTaGCATTTCCTTTCTGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: RYQFFLHIVVSSGAMKPSTRCHV*HFLSEL Trigger: TAATTCAGAAAGGAAATGCAACACATGACAACGTGT...GCTTGGTTTCATAGCACCAGAAGAAACTACTATATGGAGAAAGAATTGATATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | CACTCACACACTCGGTTGTGGGTGCGGTTGCACTCCTaGTTCACGGACTGCAGTTCCTTGCACACTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSHTRLWVRLHS*FTDCSSLHTGL Trigger: CAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 90 bp | CGGTTGTGGGTGCGGTTGCACTCCTGCTTCACGGACTGCAGTTCCTaGCACACTGGGCTGCAATACACACACTCATCACTGGTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLWVRLHSCFTDCSS*HTGLQYTHSSLVCQ Trigger: CTGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | CGGTTGTGGGTGCGGTTGCACTCCTGCTTCACGGACTaGAGTTCCTTGCACACTGGGCTGCAATACACACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLWVRLHSCFTD*SSLHTGLQYTH Trigger: GTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | AACGCCCTTCCTCACACTCACACACTCGGTTGTGGGTaGGGTTGCACTCCTGCTTCACGGACTGCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NALPHTHTLGCG*GCTPASRTAVP Trigger: AGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAGGGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 72 bp | CCTTCCTCACACTCACACACTCGGTTGTGGGTGCGGTaGCACTCCTGCTTCACGGACTGCAGTTCCTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSHSHTRLWVR*HSCFTDCSSLH Trigger: GTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | CTTCCTCACACTCACACACTCGGTTGTGGGTGCGGTTaGACTCCTGCTTCACGGACTGCAGTTCCTTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPHTHTLGCGCG*TPASRTAVPCT Trigger: TGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCACCCACAACCGAGTGTGTGAGTGTGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | TGCTCTGTGGTGAGGTTCGAGTGGCCGAGATGCCGCTaGACGCTGCTTTCACAGAGGTCAATGTCTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CSVVRFEWPRCR*TLLSQRSMSWM Trigger: CATCCAAGACATTGACCTCTGTGAAAGCAGCGTGCAGCGGCATCTCGGCCACTCGAACCTCACCACAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | AGAAGCTGCTCTGTGGTGAGGTTCGAGTGGCCGAGATaGCGCTGCACGCTGCTTTCACAGAGGTCAATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSCSVVRFEWPR*RCTLLSQRSMS Trigger: AGACATTGACCTCTGTGAAAGCAGCGTGCAGCGGCATCTCGGCCACTCGAACCTCACCACAGAGCAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | TGCGGTTGCACTCCTGCTTCACGGACTGCAGTTCCTTaGACACTGGGCTGCAATACACACACTCATCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGCTPASRTAVP*TLGCNTHTHHW Trigger: CCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGCAACCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 72 bp | CCTTGCACACTGGGCTGCAATACACACACTCATCACTaGTGTGCCAGCTGTCCGTATAAGAGTGGTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PCTLGCNTHTHH*CASCPYKSGQG Trigger: GCCCTGACCACTCTTATACGGACAGCTGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 72 bp | GCACTCCTGCTTCACGGACTGCAGTTCCTTGCACACTaGGCTGCAATACACACACTCATCACTGGTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLLHGLQFLAH*AAIHTLITGVP Trigger: TGGCACACCAGTGATGAGTGTGTGTATTGCAGCCCAGTGTGCAAGGAACTGCAGTCCGTGAAGCAGGAGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 90 bp | GCTTTCGATGAAGTCTCACCTGAGAAGAACCCATCTGGACATTTTTaGCAAACTGTGTTTCGCTCTGGGGTTCCAGCTTGCACCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AFDEVSPEKNPSGHF*QTVFRSGVPACTTP Trigger: CGGCGTGGTGCAAGCTGGAACCCCAGAGCGAAACACAGTTTGCAAAAAATGTCCAGATGGGTTCTTCTCAGGTGAGACTTCATCGAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS TCA 72 bp | TGCAGGTCTTTCTCGTTCTCTCAATCTCTTCTGGGCTaGTCTTCTTCCCAGGCAGGCTCTCCATCAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: CRSFSFSQSLLG*SSSQAGSPSRQ Trigger: TTGCCTTGATGGAGAGCCTGCCTGGGAAGAAGATCAGCCCAGAAGAGATTGAGAGAACGAGAAAGACCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 72 bp | GGCCTCTTCACACAGGGTGACATCTATTCCACACTTTaGCGTGGCTTCTCTGTTTCCGGAACACACGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLFTQGDIYSTL*RGFSVSGTHVV Trigger: GACAACGTGTGTTCCGGAAACAGAGAAGCCACGCAAAAGTGTGGAATAGATGTCACCCTGTGTGAAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS GCA 72 bp | GCCTCTTCACACAGGGTGACATCTATTCCACACTTTTaGGTGGCTTCTCTGTTTCCGGAACACACGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSHRVTSIPHF*VASLFPEHTLS Trigger: TGACAACGTGTGTTCCGGAAACAGAGAAGCCACGCAAAAGTGTGGAATAGATGTCACCCTGTGTGAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 90 bp | TTGAGGGCATACATCAGGCCCTTCAAGGTGTCTTGGTCACCATTTTaGATCCTCCATAAACTGAGTAGCTTCAGGAGCTGCTCGCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRAYIRPFKVSWSPF*ILHKLSSFRSCSLD Trigger: ATCGAGCGAGCAGCTCCTGAAGCTACTCAGTTTATGGAGGATCAAAAATGGTGACCAAGACACCTTGAAGGGCCTGATGTATGCCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS TCA 72 bp | TGTGCAGGAACCTCATGGTCTTCCTCAGACTGTGGGTaGCAGTTTTGGGAAAGTGGGATGTTTTCAAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CAGTSWSSSDCG*QFWESGMFSSA Trigger: AGCACTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGACCATGAGGTTCCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 72 bp | GTCTTCCTCAGACTGTGGGTGACAGTTTTGGGAAAGTaGGATGTTTTCAAGTGCTTGAGGGCATACATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VFLRLWVTVLGK*DVFKCLRAYIR Trigger: CCTGATGTATGCCCTCAAGCACTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CCA 72 bp | AAGCTGTGCAGGAACCTCATGGTCTTCCTCAGACTGTaGGTGACAGTTTTGGGAAAGTGGGATGTTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KLCRNLMVFLRL*VTVLGKWDVFK Trigger: CTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCTGAGGAAGACCATGAGGTTCCTGCACAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
||
| CDS CAA 72 bp | CATAAACTGAGTAGCTTCAGGAGCTGCTCGCTCGATTaGCAGGTCTTTCTCGTTCTCTCAATCTCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HKLSSFRSCSLD*QVFLVLSISSG Trigger: CCCAGAAGAGATTGAGAGAACGAGAAAGACCTGCAAATCGAGCGAGCAGCTCCTGAAGCTACTCAGTTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CAA 72 bp | GTGACAGTTTTGGGAAAGTGGGATGTTTTCAAGTGCTaGAGGGCATACATCAGGCCCTTCAAGGTGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VTVLGKWDVFKC*RAYIRPFKVSW Trigger: CCAAGACACCTTGAAGGGCCTGATGTATGCCCTCAAGCACTTGAAAACATCCCACTTTCCCAAAACTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CAA 90 bp | AGACTGTGGGTGACAGTTTTGGGAAAGTGGGATGTTTTCAAGTGCTaGAGGGCATACATCAGGCCCTTCAAGGTGTCTTGGTCACCATTT | + |
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Preference number: 6 (lower is better) Translates to: RLWVTVLGKWDVFKC*RAYIRPFKVSWSPF Trigger: AAATGGTGACCAAGACACCTTGAAGGGCCTGATGTATGCCCTCAAGCACTTGAAAACATCCCACTTTCCCAAAACTGTCACCCACAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CAA 90 bp | ACTTTTGCGTGGCTTCTCTGTTTCCGGAACACACGTTGTCATGTGTaGCATTTCCTTTCTGAATTAGCAGGAGGCCAAATGTGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TFAWLLCFRNTRCHV*HFLSELAGGQMCCS Trigger: ACTGCAGCACATTTGGCCTCCTGCTAATTCAGAAAGGAAATGCAACACATGACAACGTGTGTTCCGGAAACAGAGAAGCCACGCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CCA 72 bp | TGCTTGAGGGCATACATCAGGCCCTTCAAGGTGTCTTaGTCACCATTTTTGATCCTCCATAAACTGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CLRAYIRPFKVS*SPFLILHKLSS Trigger: GCTACTCAGTTTATGGAGGATCAAAAATGGTGACCAAGACACCTTGAAGGGCCTGATGTATGCCCTCAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CCA 72 bp | AGCACATTTGTCACACAGGAGCTGATGACCAGTTTCTaGGTCATAATGCAAGTACTTTGGAGGAAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: STFVTQELMTSF*VIMQVLWRKGF Trigger: GAAACCCTTCCTCCAAAGTACTTGCATTATGACCCAGAAACTGGTCATCAGCTCCTGTGTGACAAATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS GCA 72 bp | TTGCATTTCCTTTCTGAATTAGCAGGAGGCCAAATGTaGTGCAGTTCGTGTGTTTTATACAGGGTGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LHFLSELAGGQM*CSSCVLYRVLS Trigger: CGAAAGCACCCTGTATAAAACACACGAACTGCAGCACATTTGGCCTCCTGCTAATTCAGAAAGGAAATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CCA 72 bp | CTGATGACCAGTTTCTGGGTCATAATGCAAGTACTTTaGAGGAAGGGTTTCCTGGGTTGTCCATTCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: LMTSFWVIMQVL*RKGFLGCPFND Trigger: ATCATTGAATGGACAACCCAGGAAACCCTTCCTCCAAAGTACTTGCATTATGACCCAGAAACTGGTCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CAA 72 bp | CTGTCCACCAAAACACTCAGCCAATTTGGTATAATCTaGGTAGGAACAGCAAACCTGAAGAAGGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSTKTLSQFGII*VGTANLKKASS Trigger: TGAAGAGGCCTTCTTCAGGTTTGCTGTTCCTACCAAGATTATACCAAATTGGCTGAGTGTTTTGGTGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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| CDS CAA 72 bp | TTGGATGATCTTCTTCACCATTTCCTGGTCTCTGTTTaGATGTTTCCACAGCTTCAGCAGCTGGAAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LDDLLHHFLVSV*MFPQLQQLEGL Trigger: CAAACCTTCCAGCTGCTGAAGCTGTGGAAACATCAAAACAGAGACCAGGAAATGGTGAAGAAGATCATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079772.4 |
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