RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF10B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022074

Ensembl transcript IDs: ENSMUST00000022663.7

Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCTCAGTAGGCTGCCCACTAGCACCTGGCACAGGGAGGTGCCGTaGAGCTGTGTAGTGCTGAGCAGTAGTCTAACAGTAAACAGCAGT +
Preference number: 1 (lower is better)
Translates to: TLSRLPTSTWHREVP*SCVVLSSSLTVNSS
Trigger: ACTGCTGTTTACTGTTAGACTACTGCTCAGCACTACACAGCTGCACGGCACCTCCCTGTGCCAGGTGCTAGTGGGCAGCCTACTGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 90 bp AGGCTGAGGCAGGACAATGGTGAGTTTCAGTGTTTACTCTCACAATaGTCAAATGCTTACAGGGGGCGTGGTCCTCAAGGGTCACCCCAG +
Preference number: 1 (lower is better)
Translates to: RLRQDNGEFQCLLSQ*SNAYRGRGPQGSPQ
Trigger: CTGGGGTGACCCTTGAGGACCACGCCCCCTGTAAGCATTTGACCATTGTGAGAGTAAACACTGAAACTCACCATTGTCCTGCCTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 90 bp GCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATTaGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTACC +
Preference number: 1 (lower is better)
Translates to: ASAWQIQKWMLTVIY*IEHRAPSGGAREST
Trigger: GGTACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 90 bp TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCAGTaGAAAGAGACGCCCCTTGGTCTTGCAAACGTTATATGCCCCAGT +
Preference number: 1 (lower is better)
Translates to: SLAAYVSEDGLVGHQ*KETPLGLANVICPS
Trigger: ACTGGGGCATATAACGTTTGCAAGACCAAGGGGCGTCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR GCA 90 bp CCTATCACAGTATCTAAAGGTAGTTATTTCTCCTTCTGGATCCGGTaGAGCATACCTATGATTCCAGCTCTAGAAAGGCTGAGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: PITVSKGSYFSFWIR*SIPMIPALERLRQD
Trigger: GTCCTGCCTCAGCCTTTCTAGAGCTGGAATCATAGGTATGCTGCACCGGATCCAGAAGGAGAAATAACTACCTTTAGATACTGTGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR TCA 90 bp CATACCTATGATTCCAGCTCTAGAAAGGCTGAGGCAGGACAATGGTaGGTTTCAGTGTTTACTCTCACAATGGTCAAATGCTTACAGGGG +
Preference number: 1 (lower is better)
Translates to: HTYDSSSRKAEAGQW*VSVFTLTMVKCLQG
Trigger: CCCCTGTAAGCATTTGACCATTGTGAGAGTAAACACTGAAACTCACCATTGTCCTGCCTCAGCCTTTCTAGAGCTGGAATCATAGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 90 bp CTAGAAATCCCTATCACAGTATCTAAAGGTAGTTATTTCTCCTTCTaGATCCGGTGCAGCATACCTATGATTCCAGCTCTAGAAAGGCTG +
Preference number: 1 (lower is better)
Translates to: LEIPITVSKGSYFSF*IRCSIPMIPALERL
Trigger: CAGCCTTTCTAGAGCTGGAATCATAGGTATGCTGCACCGGATCCAGAAGGAGAAATAACTACCTTTAGATACTGTGATAGGGATTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR TCA 90 bp AAACTGGACCCTGATATAGCTGTCTCGTATGAGGCTATGCCAGTGCCTGGCAAAAAGTACCCAAGGAGCTaGAGGGGTCGGCAACCCTAT +
Preference number: 2 (lower is better)
Translates to: KLDPDIAVSYEAMPVPGKKYPRS*RGRQPY
Trigger: ATAGGGTTGCCGACCCCTTCAGCTCCTTGGGTACTT...TTTGCCAGGCACTGGCATAGCCTCATACGAGACAGCTATATCAGGGTCCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR GCA 90 bp ACAGTCATCTATTGGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTGTACCCTCAGTAGGCTaGCCACTAGCACCTGGCACA +
Preference number: 2 (lower is better)
Translates to: TVIYWIEHRAPSGGARESVPSVG*PLAPGT
Trigger: TGTGCCAGGTGCTAGTGGGCAGCCTACTGAGGGTAC...ACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATAGATGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CCA 90 bp CCCCCAGAGCTCGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCCTCTGTTACAGAGGTaGTCTTTTGTCTCTGGACAA +
Preference number: 2 (lower is better)
Translates to: PPELVSLAAYVSEDGLVGPLLQR*SFVSGQ
Trigger: TTGTCCAGAGACAAAAGACCACCTCTGTAACAGAGG...GCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR TCA 90 bp ACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTTGTCTCTGCTGGCCTCGAACTCTTaGTCTTCCTGGCTCCATCAC +
Preference number: 2 (lower is better)
Translates to: TLGLFYSSLCYRGGLLSLLASNS*SSWLHH
Trigger: GTGATGGAGCCAGGAAGATCAAGAGTTCGAGGCCAG...CAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CCA 90 bp CACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGAGTTATTTCTCCTTCTaGATCCGGTGCAGCATACCT +
Preference number: 2 (lower is better)
Translates to: HYVAAGNWNSGPLEEQPLSYFSF*IRCSIP
Trigger: AGGTATGCTGCACCGGATCCAGAAGGAGAAATAACT...CAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR TCA 90 bp TTAGAGAAGGTTGTGAGCCACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTATATGGGATCTTATGTaGACCAGCTGGCCTCGAACT +
Preference number: 2 (lower is better)
Translates to: LEKVVSHYVAAGNWNSGPIWDLM*TSWPRT
Trigger: AGTTCGAGGCCAGCTGGTTCACATAAGATCCCATAT...AGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CCA 90 bp CCCCCAGAGCTCGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCACAAAAATCTGTATGTaGCAGCTTTCTAGAAATCCC +
Preference number: 2 (lower is better)
Translates to: PPELVSLAAYVSEDGLVGTKICM*QLSRNP
Trigger: GGGATTTCTAGAAAGCTGCCACATACAGATTTTTGT...GCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CCA 90 bp ACAGTCATCTATTGGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTAACAGTAAACAGCAGTaGCTGTGTTCACAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: TVIYWIEHRAPSGGARESNSKQQ*LCSQGV
Trigger: AACTCCTTGTGAACACAGCCACTGCTGTTTACTGTT...ACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATAGATGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR GCA 72 bp AGGCTGCCCACTAGCACCTGGCACAGGGAGGTGCCGTaGAGCTGTGTAGTGCTGAGCAGTAGTCTAACAGTA +
Preference number: 3 (lower is better)
Translates to: RLPTSTWHREVP*SCVVLSSSLTV
Trigger: TACTGTTAGACTACTGCTCAGCACTACACAGCTGCACGGCACCTCCCTGTGCCAGGTGCTAGTGGGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR GCA 72 bp TGTGTTAGATTCAAGTTAGATGTACCCTCAGTAGGCTaGCCACTAGCACCTGGCACAGGGAGGTGCCGTGCA +
Preference number: 3 (lower is better)
Translates to: CVRFKLDVPSVG*PLAPGTGRCRA
Trigger: TGCACGGCACCTCCCTGTGCCAGGTGCTAGTGGGCAGCCTACTGAGGGTACATCTAACTTGAATCTAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp GAGAAGGTTGTGAGCCACTATGTAGCTGCTGGGAATTaGAACTCAGGACCTCTGGAAGAGCAGCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: EKVVSHYVAAGN*NSGPLEEQPLL
Trigger: GAGCAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp CCCATTAGAGAAGGTTGTGAGCCACTATGTAGCTGCTaGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: PIREGCEPLCSC*ELELRTSGRAA
Trigger: GGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTCTAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CAA 90 bp CACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGGCTCTCTACATAGCCTaGGCTGTCCTGAGTTCACTA +
Preference number: 3 (lower is better)
Translates to: HYVAAGNWNSGPLEEQPLALYIA*AVLSSL
Trigger: TAGTGAACTCAGGACAGCCAAGGCTATGTAGAGAGC...CAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR TCA 72 bp ATGGGATCTTATGTGAACCAGCTGGCCTCGAACTCTTaGTCTTCCTGGCTCCATCACCGGAGTGTTAGGATG +
Preference number: 3 (lower is better)
Translates to: MGSYVNQLASNS*SSWLHHRSVRM
Trigger: CATCCTAACACTCCGGTGATGGAGCCAGGAAGATCAAGAGTTCGAGGCCAGCTGGTTCACATAAGATCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp CAGGACAATGGTGAGTTTCAGTGTTTACTCTCACAATaGTCAAATGCTTACAGGGGGCGTGGTCCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: QDNGEFQCLLSQ*SNAYRGRGPQG
Trigger: CCCTTGAGGACCACGCCCCCTGTAAGCATTTGACCATTGTGAGAGTAAACACTGAAACTCACCATTGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp GCATATGTATCAGAAGATGGCCTAGTCGGCCATCAGTaGAAAGAGACGCCCCTTGGTCTTGCAAACGTTATA +
Preference number: 3 (lower is better)
Translates to: AYVSEDGLVGHQ*KETPLGLANVI
Trigger: TATAACGTTTGCAAGACCAAGGGGCGTCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR-3UTR CAA 90 bp ACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTTGTCTCTGATCATACCCTACCAATaGTGCCTTGTTCAGGAACAA +
Preference number: 3 (lower is better)
Translates to: TLGLFYSSLCYRGGLLSLIIPYQ*CLVQEQ
Trigger: TTGTTCCTGAACAAGGCACAATTGGTAGGGTATGAT...CAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR GCA 72 bp GTATCTAAAGGTAGTTATTTCTCCTTCTGGATCCGGTaGAGCATACCTATGATTCCAGCTCTAGAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: VSKGSYFSFWIR*SIPMIPALERL
Trigger: CAGCCTTTCTAGAGCTGGAATCATAGGTATGCTGCACCGGATCCAGAAGGAGAAATAACTACCTTTAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp CCTATCACAGTATCTAAAGGTAGTTATTTCTCCTTCTaGATCCGGTGCAGCATACCTATGATTCCAGCTCTA +
Preference number: 3 (lower is better)
Translates to: PITVSKGSYFSF*IRCSIPMIPAL
Trigger: TAGAGCTGGAATCATAGGTATGCTGCACCGGATCCAGAAGGAGAAATAACTACCTTTAGATACTGTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CCA 72 bp ATTCTTCCCTCTGTTACAGAGGTGGTCTTTTGTCTCTaGACAAGGGTCTTAGTAATGAATATCGCTAGAATC +
Preference number: 3 (lower is better)
Translates to: ILPSVTEVVFCL*TRVLVMNIARI
Trigger: GATTCTAGCGATATTCATTACTAAGACCCTTGTCCAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp TATTGGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTACCCAAGGACAGAGGCTGTGGGCGTaGTGGGTCCTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: YWIEHRAPSGGARESTQGQRLWA*WVLEAP
Trigger: TGGAGCCTCCAGGACCCAGCACGCCCACAGCCTCTG...TCCTTGGGTACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp AAACTGGACCCTGATATAGCTGTCTCGTATGAGGCTATGCCAGTGCCTGGCAAATCTGCGCTTCGGGAGTaGCCGGAGGCCTGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: KLDPDIAVSYEAMPVPGKSALRE*PEAWGV
Trigger: TACACCCCAGGCCTCCGGCCACTCCCGAAGCGCAGA...TTTGCCAGGCACTGGCATAGCCTCATACGAGACAGCTATATCAGGGTCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR TCA 90 bp CTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGCTTCTGGTGGCGCCACTTaGGCAGCATTTGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LCSCWELELRTSGRAATASGGAT*AAFGTG
Trigger: CCCTGTACCAAATGCTGCTCAAGTGGCGCCACCAGA...AGCAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp ACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTTGTCTCTGCAGCGGCAGAGGCTGTaGGCGTGCTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLGLFYSSLCYRGGLLSLQRQRL*ACWVLE
Trigger: CTCCAGGACCCAGCACGCCCACAGCCTCTGCCGCTG...CAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGCTCCTTCTGACAGGTACTaGCCTGCTAGACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LCSCWELELRTSGRAATAPSDRY*PARQGP
Trigger: AGGACCCTGTCTAGCAGGCCAGTACCTGTCAGAAGG...AGCAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CCCCCAGAGCTCGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCACTTGAGCAGCATTTaGTACAGGGCCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: PPELVSLAAYVSEDGLVGHLSSI*YRASRV
Trigger: CACACGTGAGGCCCTGTACCAAATGCTGCTCAAGTG...GCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp TATTGGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTACCCAAGGAGCACTGAGATCCTCCTaGCCCTGTCTCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: YWIEHRAPSGGARESTQGALRSS*PCLWLG
Trigger: GCCCAACCAGAGACAGGGCCAGGAGGATCTCAGTGC...TCCTTGGGTACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CAA 72 bp AGAGAAGGTTGTGAGCCACTATGTAGCTGCTGGGAATaGGAACTCAGGACCTCTGGAAGAGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: REGCEPLCSCWE*ELRTSGRAATA
Trigger: AGCAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp CACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGATACAGAGCAACCATTaGCTCCATGCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HYVAAGNWNSGPLEEQPLIQSNH*LHAPVF
Trigger: GAAGACTGGAGCATGGAGGCAATGGTTGCTCTGTAT...CAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCATCTTCGGGGCTCTCTACATAGCCTTGGCTGTCCTGAGTTCAATGGTTGGAATGGCTaGTGTAGTCAATACCCTCTC +
Preference number: 4 (lower is better)
Translates to: LKSLHLRGSLHSLGCPEFNGWNG*CSQYPL
Trigger: GAGAGGGTATTGACTACACCAGCCATTCCAACCATT...GAACTCAGGACAGCCAAGGCTATGTAGAGAGCCCCGAAGATGCAGGCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGCTACTTCCGGTTTTCTCTaGGGGTACAGGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LCSCWELELRTSGRAATATSGFL*GYRKSV
Trigger: AACTGACTTCCTGTACCCCCAGAGAAAACCGGAAGT...AGCAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCATCTTCGGGGCTCTCTACATAGCCTTGGCTGTCCTGAGTTCCTTCAATTTTCTCCATaGCATCTCTCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: LKSLHLRGSLHSLGCPEFLQFSP*HLSLPR
Trigger: CCGTGGAAGAGAGAGATGCCATGGAGAAAATTGAAG...GAACTCAGGACAGCCAAGGCTATGTAGAGAGCCCCGAAGATGCAGGCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp CTGAAGAGCCTGCATCTTCGGGGCTCTCTACATAGCCTTGGCTGTCCTGAGTTCCTTTATCTTCAAAGGTaGCTGGTTTGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: LKSLHLRGSLHSLGCPEFLYLQR*LVCIDT
Trigger: TGTGTCGATGCAAACCAGGCACCTTTGAAGATAAAG...GAACTCAGGACAGCCAAGGCTATGTAGAGAGCCCCGAAGATGCAGGCTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp AAACTGGACCCTGATATAGCTGTCTCGTATGAGGCTATGCCAGTGCCTGGCAAACAACCATTGCCTCCATaGTCCAGTCTTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: KLDPDIAVSYEAMPVPGKQPLPP*SSLPDK
Trigger: CTTGTCTGGAAGACTGGAGCATGGAGGCAATGGTTG...TTTGCCAGGCACTGGCATAGCCTCATACGAGACAGCTATATCAGGGTCCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCATCTTCGGGGCTCTCTACATAGCCTTGGCTGTCCTGAGTTCGACACACCGTATTTGTaGTTATGTTGCATCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LKSLHLRGSLHSLGCPEFDTPYL*LCCIGF
Trigger: AAACCCGATGCAACATAACCACAAATACGGTGTGTC...GAACTCAGGACAGCCAAGGCTATGTAGAGAGCCCCGAAGATGCAGGCTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR TCA 90 bp AAACTGGACCCTGATATAGCTGTCTCGTATGAGGCTATGCCAGTGCCTGGCAAATTCTTTCCTGTTTTCTaGGTCTTGCCAGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: KLDPDIAVSYEAMPVPGKFFPVF*VLPGSV
Trigger: CACGGAACCTGGCAAGACTCAGAAAACAGGAAAGAA...TTTGCCAGGCACTGGCATAGCCTCATACGAGACAGCTATATCAGGGTCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CCA 90 bp AAACTGGACCCTGATATAGCTGTCTCGTATGAGGCTATGCCAGTGCCTGGCAAAATGCCCAAGCCGTTTTaGAGACACACTTCCGGTTTT +
Preference number: 4 (lower is better)
Translates to: KLDPDIAVSYEAMPVPGKMPKPF*RHTSGF
Trigger: AAAACCGGAAGTGTGTCTCCAAAACGGCTTGGGCAT...TTTGCCAGGCACTGGCATAGCCTCATACGAGACAGCTATATCAGGGTCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR TCA 90 bp TTAGAGAAGGTTGTGAGCCACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTTTGACCATTTGGATTTaGTTGTCTGTGAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LEKVVSHYVAAGNWNSGPLTIWI*LSVRPN
Trigger: GTTGGGCCTCACAGACAATCAAATCCAAATGGTCAA...AGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp ACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTTGTCTCTGCTGTTTTCTGAGTCTTaGCAGGTTCCGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TLGLFYSSLCYRGGLLSLLFSES*QVPCCG
Trigger: ACCACAACACGGAACCTGGCAAGACTCAGAAAACAG...CAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp TATTGGATAGAACACAGGGCCCCTAGTGGAGGAGCTAGAGAAAGTACCCAAGGACTTCCTTACAGACTGTaGAGAGAATACATGAATCCA +
Preference number: 4 (lower is better)
Translates to: YWIEHRAPSGGARESTQGLPYRL*REYMNP
Trigger: TGGATTCATGTATTCTCTGCACAGTCTGTAAGGAAG...TCCTTGGGTACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR TCA 90 bp AGTTTCCACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTTTGTGCAGAGAATACATaGATCCAGAGAATGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SFHPRAVLFFPLLQRWSFCAENT*IQRMVG
Trigger: TCCAACCATTCTCTGGATTCATGTATTCTCTGCACA...AAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGTGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR GCA 90 bp TTAGAGAAGGTTGTGAGCCACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTTATTTGTGGTTATGTTaGATCGGGTTTCTACGACTT +
Preference number: 4 (lower is better)
Translates to: LEKVVSHYVAAGNWNSGPYLWLC*IGFLRL
Trigger: AAGTCGTAGAAACCCGATGCAACATAACCACAAATA...AGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTGGCTCACAACCTTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
3UTR CAA 72 bp CTGTTTTATTCTTCCCTCTGTTACAGAGGTGGTCTTTaGTCTCTGGACAAGGGTCTTAGTAATGAATATCGC +
Preference number: 4 (lower is better)
Translates to: LFYSSLCYRGGL*SLDKGLSNEYR
Trigger: GCGATATTCATTACTAAGACCCTTGTCCAGAGACAAAAGACCACCTCTGTAACAGAGGGAAGAATAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CCA 90 bp AAGGCATCCAGCAGATGGTTGATGGAGGCACTTCGCCCAGTCTGGTaGCGCCACTTGAGCAGCATTTGGTACAGGGCCTCACGTGTGACC +
Preference number: 5 (lower is better)
Translates to: KASSRWLMEALRPVW*RHLSSIWYRASRVT
Trigger: GGTCACACGTGAGGCCCTGTACCAAATGCTGCTCAAGTGGCGCCACCAGACTGGGCGAAGTGCCTCCATCAACCATCTGCTGGATGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CCA 90 bp TCCAAGGCATCCAGCAGATGGTTGATGGAGGCACTTCGCCCAGTCTaGTGGCGCCACTTGAGCAGCATTTGGTACAGGGCCTCACGTGTG +
Preference number: 5 (lower is better)
Translates to: SKASSRWLMEALRPV*WRHLSSIWYRASRV
Trigger: CACACGTGAGGCCCTGTACCAAATGCTGCTCAAGTGGCGCCACCAGACTGGGCGAAGTGCCTCCATCAACCATCTGCTGGATGCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS TCA 90 bp GGTACAGGAAGTCAGTTCCTCTTCCCCGTCAGTGCAGTTAGAGCATaGCTGGCAGATCTCAGGGGAGTCTTTATCTTCAAAGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GTGSQFLFPVSAVRA*LADLRGVFIFKGAW
Trigger: CCAGGCACCTTTGAAGATAAAGACTCCCCTGAGATCTGCCAGTCATGCTCTAACTGCACTGACGGGGAAGAGGAACTGACTTCCTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 90 bp CTTTCGGGATCCCGTTCACAGCCTCTTTTTATACAGAGCAACCATTaGCTCCATGCTCCAGTCTTCCAGACAAGCAGAGCTCCAATCAGC +
Preference number: 5 (lower is better)
Translates to: LSGSRSQPLFIQSNH*LHAPVFQTSRAPIS
Trigger: GCTGATTGGAGCTCTGCTTGTCTGGAAGACTGGAGCATGGAGGCAATGGTTGCTCTGTATAAAAAGAGGCTGTGAACGGGATCCCGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CAA 90 bp CACTATGTAGCTGCTGGGAATTGGAACTCAGGACCTCTGGAAGAGCAGCCACTGTATACAGAGCAACCATaGCCTCCATGCTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: HYVAAGNWNSGPLEEQPLYTEQP*PPCSSL
Trigger: AAGACTGGAGCATGGAGGCAATGGTTGCTCTGTATA...CAGTGGCTGCTCTTCCAGAGGTCCTGAGTTCCAATTCCCAGCAGCTACATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 90 bp CAAAGGTGCCTGGTTTGCATCGACACACCGTATTTGTGGTTATGTTaGATCGGGTTTCTACGACTTTATCTTCCTTACAGACTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: QRCLVCIDTPYLWLC*IGFLRLYLPYRLCR
Trigger: TCTGCACAGTCTGTAAGGAAGATAAAGTCGTAGAAACCCGATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAGGCACCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS-3UTR CAA 90 bp TCACAAGGAGTTTCCACCCTAGGGCTGTTTTATTCTTCCCTCTGTTACAGAGGTTTTGACCATTTGGATTaGATTGTCTGTGAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SQGVSTLGLFYSSLCYRGFDHLD*IVCEAQ
Trigger: TTGGGCCTCACAGACAATCAAATCCAAATGGTCAAA...ACCTCTGTAACAGAGGGAAGAATAAAACAGCCCTAGGGTGGAAACTCCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp CTTCGGGAGTGGCCGGAGGCCTGGGGTGTAGTGATCTaGCCGGGCAGCGGCAGAGGCTGTGGGCGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LREWPEAWGVVI*PGSGRGCGRAG
Trigger: CCCAGCACGCCCACAGCCTCTGCCGCTGCCCGGGCAGATCACTACACCCCAGGCCTCCGGCCACTCCCGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CCA 72 bp TCCAGCAGATGGTTGATGGAGGCACTTCGCCCAGTCTaGTGGCGCCACTTGAGCAGCATTTGGTACAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSRWLMEALRPV*WRHLSSIWYRA
Trigger: GGCCCTGTACCAAATGCTGCTCAAGTGGCGCCACCAGACTGGGCGAAGTGCCTCCATCAACCATCTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CCA 72 bp AGCAGATGGTTGATGGAGGCACTTCGCCCAGTCTGGTaGCGCCACTTGAGCAGCATTTGGTACAGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SRWLMEALRPVW*RHLSSIWYRAS
Trigger: TGAGGCCCTGTACCAAATGCTGCTCAAGTGGCGCCACCAGACTGGGCGAAGTGCCTCCATCAACCATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 72 bp TCAAACGCACTGAGATCCTCCTGGCCCTGTCTCTGGTaGGGCTGCAGCGTTCTGATAAGTAAACCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: SNALRSSWPCLW*GCSVLISKPPG
Trigger: TCCGGGAGGTTTACTTATCAGAACGCTGCAGCCCAACCAGAGACAGGGCCAGGAGGATCTCAGTGCGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 90 bp CAGGGCCTCACGTGTGACCAGTGTTTCGGCTTTGACCATTTGGATTaGATTGTCTGTGAGGCCCAACTGCCGCATGAGACGGTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: QGLTCDQCFGFDHLD*IVCEAQLPHETVPG
Trigger: TCCTGGAACCGTCTCATGCGGCAGTTGGGCCTCACAGACAATCAAATCCAAATGGTCAAAGCCGAAACACTGGTCACACGTGAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS TCA 72 bp CGTGTGACCAGTGTTTCGGCTTTGACCATTTGGATTTaGTTGTCTGTGAGGCCCAACTGCCGCATGAGACGG +
Preference number: 6 (lower is better)
Translates to: RVTSVSALTIWI*LSVRPNCRMRR
Trigger: CCGTCTCATGCGGCAGTTGGGCCTCACAGACAATCAAATCCAAATGGTCAAAGCCGAAACACTGGTCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 72 bp ACGTGTGACCAGTGTTTCGGCTTTGACCATTTGGATTaGATTGTCTGTGAGGCCCAACTGCCGCATGAGACG +
Preference number: 6 (lower is better)
Translates to: TCDQCFGFDHLD*IVCEAQLPHET
Trigger: CGTCTCATGCGGCAGTTGGGCCTCACAGACAATCAAATCCAAATGGTCAAAGCCGAAACACTGGTCACACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 90 bp ACTTTCGGGATCCCGTTCACAGCCTCTTTTTATACAGAGCAACCATaGCCTCCATGCTCCAGTCTTCCAGACAAGCAGAGCTCCAATCAG +
Preference number: 6 (lower is better)
Translates to: TFGIPFTASFYTEQP*PPCSSLPDKQSSNQ
Trigger: CTGATTGGAGCTCTGCTTGTCTGGAAGACTGGAGCATGGAGGCAATGGTTGCTCTGTATAAAAAGAGGCTGTGAACGGGATCCCGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS TCA 72 bp AGTCAGTTCCTCTTCCCCGTCAGTGCAGTTAGAGCATaGCTGGCAGATCTCAGGGGAGTCTTTATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SQFLFPVSAVRA*LADLRGVFIFK
Trigger: TTTGAAGATAAAGACTCCCCTGAGATCTGCCAGTCATGCTCTAACTGCACTGACGGGGAAGAGGAACTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp ACAGCCTCTTTTTATACAGAGCAACCATTGCCTCCATaGTCCAGTCTTCCAGACAAGCAGAGCTCCAATCAG +
Preference number: 6 (lower is better)
Translates to: TASFYTEQPLPP*SSLPDKQSSNQ
Trigger: CTGATTGGAGCTCTGCTTGTCTGGAAGACTGGAGCATGGAGGCAATGGTTGCTCTGTATAAAAAGAGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp ACTGGCAGATCTCAGGGGAGTCTTTATCTTCAAAGGTaGCTGGTTTGCATCGACACACCGTATTTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: TGRSQGSLYLQR*LVCIDTPYLWL
Trigger: TAACCACAAATACGGTGTGTCGATGCAAACCAGGCACCTTTGAAGATAAAGACTCCCCTGAGATCTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp TCTCAGGGGAGTCTTTATCTTCAAAGGTGCCTGGTTTaGATCGACACACCGTATTTGTGGTTATGTTGCATC +
Preference number: 6 (lower is better)
Translates to: SQGSLYLQRCLV*IDTPYLWLCCI
Trigger: GATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAGGCACCTTTGAAGATAAAGACTCCCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 72 bp CCTGGTTTGCATCGACACACCGTATTTGTGGTTATGTaGCATCGGGTTTCTACGACTTTATCTTCCTTACAG +
Preference number: 6 (lower is better)
Translates to: PGLHRHTVFVVM*HRVSTTLSSLQ
Trigger: CTGTAAGGAAGATAAAGTCGTAGAAACCCGATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 72 bp CTTCAAAGGTGCCTGGTTTGCATCGACACACCGTATTaGTGGTTATGTTGCATCGGGTTTCTACGACTTTAT +
Preference number: 6 (lower is better)
Translates to: LQRCLVCIDTPY*WLCCIGFLRLY
Trigger: ATAAAGTCGTAGAAACCCGATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAGGCACCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS CAA 72 bp ATCTCAGGGGAGTCTTTATCTTCAAAGGTGCCTGGTTaGCATCGACACACCGTATTTGTGGTTATGTTGCAT +
Preference number: 6 (lower is better)
Translates to: ISGESLSSKVPG*HRHTVFVVMLH
Trigger: ATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAGGCACCTTTGAAGATAAAGACTCCCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS TCA 72 bp GACTTTATCTTCCTTACAGACTGTGCAGAGAATACATaGATCCAGAGAATGGTTGGAATGGCTGGTGTAGTC +
Preference number: 6 (lower is better)
Translates to: DFIFLTDCAENT*IQRMVGMAGVV
Trigger: GACTACACCAGCCATTCCAACCATTCTCTGGATTCATGTATTCTCTGCACAGTCTGTAAGGAAGATAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp CTGGTTTGCATCGACACACCGTATTTGTGGTTATGTTaGATCGGGTTTCTACGACTTTATCTTCCTTACAGA +
Preference number: 6 (lower is better)
Translates to: LVCIDTPYLWLC*IGFLRLYLPYR
Trigger: TCTGTAAGGAAGATAAAGTCGTAGAAACCCGATGCAACATAACCACAAATACGGTGTGTCGATGCAAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7
CDS GCA 72 bp ATCGGGTTTCTACGACTTTATCTTCCTTACAGACTGTaGAGAGAATACATGAATCCAGAGAATGGTTGGAAT +
Preference number: 6 (lower is better)
Translates to: IGFLRLYLPYRL*REYMNPENGWN
Trigger: ATTCCAACCATTCTCTGGATTCATGTATTCTCTGCACAGTCTGTAAGGAAGATAAAGTCGTAGAAACCCGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022663.7