Pregenerated sensors for TNFAIP8L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074345Ensembl transcript IDs: ENSMUST00000098760.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAGAGTCACCGCGGCAGCCTTGAACAGGTGTCCTCAATCCACATaGAGAATAAAGGGGGCGGCATCACCTGGACTCTCATTTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LRVTAAALNRCPQST*RIKGAASPGLSFLL Trigger: TAAGAGAAATGAGAGTCCAGGTGATGCCGCCCCCTTTATTCTGCATGTGGATTGAGGACACCTGTTCAAGGCTGCCGCGGTGACTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 90 bp | AGCAGTGAATGCGAGTTCTCCTGTTCAGTCCTCACCACAGCCCAGTaGGGTAGTCAGGAAGCATCCAGTTCCAGAACACAGATCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSECEFSCSVLTTAQ*GSQEASSSRTQISF Trigger: AAAGGAGATCTGTGTTCTGGAACTGGATGCTTCCTGACTACCTCACTGGGCTGTGGTGAGGACTGAACAGGAGAACTCGCATTCACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 90 bp | AGCATCCAGTTCCAGAACACAGATCTCCTTTACCAGCGGCAGGGCTaGTATCCACATCCATGTTCTCTGTATCCTAATCCAGGGTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SIQFQNTDLLYQRQG*YPHPCSLYPNPGCL Trigger: AAGGCACCCTGGATTAGGATACAGAGAACATGGATGTGGATACCAGCCCTGCCGCTGGTAAAGGAGATCTGTGTTCTGGAACTGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR GCA 90 bp | TTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTaGCCAGGGAGTAAACACACCCAAGTCTGGGTTCAAATCCGCATC | + |
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Preference number: 1 (lower is better) Translates to: FFAKHSSFRLESSCL*PGSKHTQVWVQIRI Trigger: GATGCGGATTTGAACCCAGACTTGGGTGTGTTTACTCCCTGGGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 90 bp | ATCCATTTATTACATACAGTCATTGGTCTCTGTTTCAGAAAGCAGTaGATGCGAGTTCTCCTGTTCAGTCCTCACCACAGCCCAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: IHLLHTVIGLCFRKQ*MRVLLFSPHHSPVR Trigger: CCTCACTGGGCTGTGGTGAGGACTGAACAGGAGAACTCGCATTCACTGCTTTCTGAAACAGAGACCAATGACTGTATGTAATAAATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 90 bp | GGTACAGGGACTCCCCATATTTATTACAGCAATATTCGCAATAGCTaGGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GTGTPHIYYSNIRNS*ETDSKHPSTDERQK Trigger: CTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGGGAGTCCCTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 90 bp | CCAATAGATATCAGTCTTCCCAGAAAACTCCAGCTTATGTCAAGTTaGCAAATATTCAACCAAGTCACTGGACCCCTTGTCATGGTATGC | + |
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Preference number: 1 (lower is better) Translates to: PIDISLPRKLQLMSS*QIFNQVTGPLVMVC Trigger: GCATACCATGACAAGGGGTCCAGTGACTTGGTTGAATATTTGTCAACTTGACATAAGCTGGAGTTTTCTGGGAAGACTGATATCTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 90 bp | AAGACACAAGAACATCTTGAACAAGGGTTGCTGCTTGATTCTCACTaGATGAGGTTGAATATTCTAACTTCGAAGCAGCAAAGTCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KTQEHLEQGLLLDSH*MRLNILTSKQQSPR Trigger: TCTTGGACTTTGCTGCTTCGAAGTTAGAATATTCAACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGATGTTCTTGTGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR GCA 90 bp | ATTTTGACCAAAAGCAACTTGAGAAGGAAAGGATTTATGTCTCCTTaGAGACTAAAGTCCTTTATGAAGGGAATTAAGTGCACAAACTCA | + |
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Preference number: 1 (lower is better) Translates to: ILTKSNLRRKGFMSP*RLKSFMKGIKCTNS Trigger: TGAGTTTGTGCACTTAATTCCCTTCATAAAGGACTTTAGTCTGCAAGGAGACATAAATCCTTTCCTTCTCAAGTTGCTTTTGGTCAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAGAAAAAGTGACTACCAGCGGCAGGGCTaGTATCCACATCCATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ERQTQNTHQQMSDRRKSDYQRQG*YPHPCS Trigger: AGAACATGGATGTGGATACCAGCCCTGCCGCTGGTA...GTCACTTTTTCTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | CTGCTTACAACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTaGAGAGCTCTTGCCTGTGCCCAGGGAGTAAACACACCCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LLTTDYSLPNTVRLD*RALACAQGVNTPKS Trigger: AGACTTGGGTGTGTTTACTCCCTGGGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTTGTAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGACTCAGATCTTGACCTaGGCAGCTCAGTTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKTQILT*AAQFHW Trigger: CCAGTGAAACTGAGCTGCCCAGGTCAAGATCTGAGT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | AGGAAGGTAATCGAAGCAGCCTTTCTGCTTACAACAGACTATTCTTaGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RKVIEAAFLLTTDYS*PNTVRLDLRALACA Trigger: GGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTTGTAAGCAGAAAGGCTGCTTCGATTACCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR TCA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGACAAGGGTTGCTGCTTaGTTCTCACTGGATGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NRLFFAKHSSFRLESSCLTRVAA*FSLDEV Trigger: AACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGT...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | GAACATCTTGAACAAGGGTTGCTGCTTGATTCTCACTGGATGAGGTaGAATATTCTAACTTCGAAGCAGCAAAGTCCAAGAGAGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: EHLEQGLLLDSHWMR*NILTSKQQSPREGK Trigger: TTTCCCCTCTCTTGGACTTTGCTGCTTCGAAGTTAGAATATTCAACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAGAAAAAGTGACATCTTGAACAAGGGTTaGTGCTTGATTCTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: ERQTQNTHQQMSDRRKSDILNKG*CLILTG Trigger: TCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGAT...GTCACTTTTTCTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR GCA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCTGTCCTCAATCCACATaGAGAATAAAGGGGGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: PIFITAIFAIAERQTQNTCPQST*RIKGAA Trigger: TGCCGCCCCCTTTATTCTGCATGTGGATTGAGGACA...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGAAACACACCCAAGTCTaGGTTCAAATCCGCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: NRLFFAKHSSFRLESSCLKHTQV*VQIRIR Trigger: TCTGATGCGGATTTGAACCCAGACTTGGGTGTGTTT...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGATGAAACAATCATGTTaGAAACAGGTACAGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKMKQSC*KQVQGL Trigger: GAGTCCCTGTACCTGTTTTCAACATGATTGTTTCAT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGATAGATGCTGCTTACTaGTTTGGTTCTATGGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKIDAAY*FGSMVC Trigger: GCAAACCATAGAACCAAACCAGTAAGCAGCATCTAT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGATACACAAAAGACCCTaGAGAGTCCACAAGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKIHKRP*RVHKKY Trigger: ATATTTCTTGTGGACTCTTCAGGGTCTTTTGTGTAT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR GCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGGGATTTATGTCTCCTTaGAGACTAAAGTCCTTTATG | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKGFMSP*RLKSFM Trigger: CATAAAGGACTTTAGTCTGCAAGGAGACATAAATCC...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTATTACATACAGTCATTaGTCTCTGTTTCAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ASPGLSFLLKEARSSFFLITYSH*SLFQKA Trigger: TGCTTTCTGAAACAGAGACCAATGACTGTATGTAAT...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGTTTCACACCAATCATTaGTCAAGAAAATGCCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKFHTNH*SRKCPR Trigger: TCTAGGGCATTTTCTTGACCAATGATTGGTGTGAAA...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | CGCATCAGAGTTATAAAGAAGACACAAGAACATCTTGAACAAGGGTaGCTGCTTGATTCTCACTGGATGAGGTTGAATATTCTAACTTCG | + |
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Preference number: 2 (lower is better) Translates to: RIRVIKKTQEHLEQG*LLDSHWMRLNILTS Trigger: CGAAGTTAGAATATTCAACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGATGTTCTTGTGTCTTCTTTATAACTCTGATGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR GCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGATTACTGGCTCTGTATaGCAAGTAAATGAAACAATC | + |
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Preference number: 2 (lower is better) Translates to: ILVTKVLEASSSSMRHVKITGSV*QVNETI Trigger: GATTGTTTCATTTACTTGGCATACAGAGCCAGTAAT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | AGATCCTTTCACACCAATCATTGGTCAAGAAAATGCCCTAGACATTaGCCTACAATTAGATGTGTGTGTTTTCCCAATAGATATCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: RSFHTNHWSRKCPRH*PTIRCVCFPNRYQS Trigger: AGACTGATATCTATTGGGAAAACACACACATCTAATTGTAGGCAAATGTCTAGGGCATTTTCTTGACCAATGATTGGTGTGAAAGGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 90 bp | CTAATTATGAACAATTATACCACATCCATTTATTACATACAGTCATaGGTCTCTGTTTCAGAAAGCAGTGAATGCGAGTTCTCCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LIMNNYTTSIYYIQS*VSVSESSECEFSCS Trigger: TGAACAGGAGAACTCGCATTCACTGCTTTCTGAAACAGAGACCAATGACTGTATGTAATAAATGGATGTGGTATAATTGTTCATAATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR GCA 72 bp | ACCGCGGCAGCCTTGAACAGGTGTCCTCAATCCACATaGAGAATAAAGGGGGCGGCATCACCTGGACTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TAAALNRCPQST*RIKGAASPGLS Trigger: TGAGAGTCCAGGTGATGCCGCCCCCTTTATTCTGCATGTGGATTGAGGACACCTGTTCAAGGCTGCCGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 72 bp | TGCGAGTTCTCCTGTTCAGTCCTCACCACAGCCCAGTaGGGTAGTCAGGAAGCATCCAGTTCCAGAACACAG | + |
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Preference number: 3 (lower is better) Translates to: CEFSCSVLTTAQ*GSQEASSSRTQ Trigger: CTGTGTTCTGGAACTGGATGCTTCCTGACTACCTCACTGGGCTGTGGTGAGGACTGAACAGGAGAACTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | TCAATCCACATGCAGAATAAAGGGGGCGGCATCACCTaGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: SIHMQNKGGGIT*TLISLKGGKEL Trigger: GAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGCCGCCCCCTTTATTCTGCATGTGGATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | AAGGTCTCACATCTGGAATTGACTCAGATCTTGACCTaGGCAGCTCAGTTTCACTGGCTATGCCATCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KVSHLELTQILT*AAQFHWLCHLQ Trigger: CTGCAGATGGCATAGCCAGTGAAACTGAGCTGCCCAGGTCAAGATCTGAGTCAATTCCAGATGTGAGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR GCA 72 bp | AAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTaGCCAGGGAGTAAACACACCCAAGTCTGGGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: KHSSFRLESSCL*PGSKHTQVWVQ Trigger: TTGAACCCAGACTTGGGTGTGTTTACTCCCTGGGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR GCA 72 bp | ATACAGTCATTGGTCTCTGTTTCAGAAAGCAGTGAATaGGAGTTCTCCTGTTCAGTCCTCACCACAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IQSLVSVSESSE*EFSCSVLTTAQ Trigger: CTGGGCTGTGGTGAGGACTGAACAGGAGAACTCGCATTCACTGCTTTCTGAAACAGAGACCAATGACTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | TTCCAGAACACAGATCTCCTTTACCAGCGGCAGGGCTaGTATCCACATCCATGTTCTCTGTATCCTAATCCA | + |
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Preference number: 3 (lower is better) Translates to: FQNTDLLYQRQG*YPHPCSLYPNP Trigger: TGGATTAGGATACAGAGAACATGGATGTGGATACCAGCCCTGCCGCTGGTAAAGGAGATCTGTGTTCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCGTCACCGCGGCAGCCTaGAACAGGTGTCCTCAATCC | + |
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Preference number: 3 (lower is better) Translates to: PIFITAIFAIAERQTQNTVTAAA*NRCPQS Trigger: GGATTGAGGACACCTGTTCAAGGCTGCCGCGGTGAC...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | TCTTGCCTGTGCCCAGGGAGTAAACACACCCAAGTCTaGGTTCAAATCCGCATCAGAGTTATAAAGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: SCLCPGSKHTQV*VQIRIRVIKKT Trigger: TGTCTTCTTTATAACTCTGATGCGGATTTGAACCCAGACTTGGGTGTGTTTACTCCCTGGGCACAGGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTAGACACAAGAACATCTaGAACAAGGGTTGCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: ASPGLSFLLKEARSSFFLRHKNI*NKGCCL Trigger: CAAGCAGCAACCCTTGTTCAAGATGTTCTTGTGTCT...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | AAAGTAGAGGCCATGGATAGATGCTGCTTACTGGTTTaGTTCTATGGTTTGCTCAGCCTGGTTCCTTACACA | + |
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Preference number: 3 (lower is better) Translates to: KVEAMDRCCLLV*FYGLLSLVPYT Trigger: TGTGTAAGGAACCAGGCTGAGCAAACCATAGAACCAAACCAGTAAGCAGCATCTATCCATGGCCTCTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCACAGTTCGTTTAGACTaGAGAGCTCTTGCCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: PIFITAIFAIAERQTQNTTVRLD*RALACA Trigger: GGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGT...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 72 bp | CCAAAGACGACAATCAAAACCTTAAACAGTGAAAAATaGCTGGAGGGACTGCCATCCCAGACTTCAAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: PKTTIKTLNSEK*LEGLPSQTSSC Trigger: ACAACTTGAAGTCTGGGATGGCAGTCCCTCCAGTCATTTTTCACTGTTTAAGGTTTTGATTGTCGTCTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTTATTACATACAGTCATaGGTCTCTGTTTCAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: ASPGLSFLLKEARSSFFLYYIQS*VSVSES Trigger: GCTTTCTGAAACAGAGACCAATGACTGTATGTAATA...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CCA 72 bp | GAACATCTTGAACAAGGGTTGCTGCTTGATTCTCACTaGATGAGGTTGAATATTCTAACTTCGAAGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: EHLEQGLLLDSH*MRLNILTSKQQ Trigger: TTGCTGCTTCGAAGTTAGAATATTCAACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTCTCACTGGATGAGGTaGAATATTCTAACTTCGAAG | + |
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Preference number: 3 (lower is better) Translates to: NRLFFAKHSSFRLESSCLSHWMR*NILTSK Trigger: CTTCGAAGTTAGAATATTCAACCTCATCCAGTGAGA...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGACAACAGACTATTCTTaGCCAAACACAGTTCGTTTA | + |
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Preference number: 3 (lower is better) Translates to: ILVTKVLEASSSSMRHVKTTDYS*PNTVRL Trigger: TAAACGAACTGTGTTTGGCAAAGAATAGTCTGTTGT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR-3UTR CAA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGTTGACCAAAAGCAACTaGAGAAGGAAAGGATTTATG | + |
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Preference number: 3 (lower is better) Translates to: ILVTKVLEASSSSMRHVKLTKSN*RRKGFM Trigger: CATAAATCCTTTCCTTCTCAAGTTGCTTTTGGTCAA...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR TCA 72 bp | CAGAAACTACATTACTGGCTCTGTATGCCAAGTAAATaGAACAATCATGTTGAAAACAGGTACAGGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: QKLHYWLCMPSK*NNHVENRYRDS Trigger: GGAGTCCCTGTACCTGTTTTCAACATGATTGTTTCATTTACTTGGCATACAGAGCCAGTAATGTAGTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR TCA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTATCTTCTTCTGGGCTTaGAGGGCGAGATTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPGLSFLLKEARSSFFLIFFWA*RARFLE Trigger: TTCCAAGAATCTCGCCCTTCAAGCCCAGAAGAAGAT...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR GCA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCGGCTCGCCCTCGCTCTaGTCTCCAGAATCTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PIFITAIFAIAERQTQNTGSPSL*SPESES Trigger: GGATTCAGATTCTGGAGAGCAGAGCGAGGGCGAGCC...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTGCGTCCATGGGTTCTaGGTGTCAAGTGTCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRLFFAKHSSFRLESSCLCVHGF*VSSVAV Trigger: TACAGCGACACTTGACACCCAGAACCCATGGACGCA...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR GCA 90 bp | GAGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAGAAAAAGTGACTGTTGGCCACAGTTTTaGTGGCTATCTTGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERQTQNTHQQMSDRRKSDCWPQF*WLSCSG Trigger: TCCTGAGCAAGATAGCCAGCAAAACTGTGGCCAACA...GTCACTTTTTCTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAGAAAAAGTGACTGGCCACAGTTTTGCTaGCTATCTTGCTCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ERQTQNTHQQMSDRRKSDWPQFC*LSCSGS Trigger: AGATCCTGAGCAAGATAGCCAGCAAAACTGTGGCCA...GTCACTTTTTCTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 72 bp | ACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTaGAGAGCTCTTGCCTGTGCCCAGGGAGTAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: TDYSLPNTVRLD*RALACAQGVNT Trigger: TGTGTTTACTCCCTGGGCACAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGACTCAAAACACCCATCAACAGATGAGCGACAGAAGAAAAAGTGACCATCAGCAAAGTGGTTaGAGACATGGTTTATGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTQNTHQQMSDRRKSDHQQSG*RHGLCV Trigger: GACGCATAAACCATGTCTTCAACCACTTTGCTGATG...GTCACTTTTTCTTCTGTCGCTCATCTGTTGATGGGTGTTTTGAGTCTGTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR GCA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGAGGTCCTTGCACTCATaGAGAAGCTTAGAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NRLFFAKHSSFRLESSCLRSLHS*RSLEST Trigger: TGTGCTCTCTAAGCTTCTGCATGAGTGCAAGGACCT...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGCATCAATCAGCATGTTaGCCACAGTTTTGCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ILVTKVLEASSSSMRHVKHQSAC*PQFCWL Trigger: TAGCCAGCAAAACTGTGGCCAACATGCTGATTGATG...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR GCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGCATCAAAGATCTCACTaGTGGTGTCATCAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILVTKVLEASSSSMRHVKHQRSH*WCHQSA Trigger: TGCTGATTGATGACACCAGCAGTGAGATCTTTGATG...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGGCCTCCTTCTTGTTGTaGGTGTGTATTTCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NRLFFAKHSSFRLESSCLASFLL*VCISVT Trigger: AGTCACAGAAATACACACCCACAACAAGAAGGAGGC...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGTCCACATCAGCAAAGTaGTTGAAGACATGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: ILVTKVLEASSSSMRHVKSTSAK*LKTWFM Trigger: CATAAACCATGTCTTCAACCACTTTGCTGATGTGGA...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CCA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCGCGGACCATAGAGAGTaGAAAGGAATTCCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIFITAIFAIAERQTQNTADHRE*KGIPHQ Trigger: CTGATGTGGAATTCCTTTCCACTCTCTATGGTCCGC...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 72 bp | ATCGAAGCAGCCTTTCTGCTTACAACAGACTATTCTTaGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IEAAFLLTTDYS*PNTVRLDLRAL Trigger: AAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTTGTAAGCAGAAAGGCTGCTTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 72 bp | TATCAGTCTTCCCAGAAAACTCCAGCTTATGTCAAGTaGACAAATATTCAACCAAGTCACTGGACCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YQSSQKTPAYVK*TNIQPSHWTPC Trigger: ACAAGGGGTCCAGTGACTTGGTTGAATATTTGTCAACTTGACATAAGCTGGAGTTTTCTGGGAAGACTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 72 bp | CACACCAATCATTGGTCAAGAAAATGCCCTAGACATTaGCCTACAATTAGATGTGTGTGTTTTCCCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTNHWSRKCPRH*PTIRCVCFPNR Trigger: TCTATTGGGAAAACACACACATCTAATTGTAGGCAAATGTCTAGGGCATTTTCTTGACCAATGATTGGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| 3UTR CAA 72 bp | GTTATAAAGAAGACACAAGAACATCTTGAACAAGGGTaGCTGCTTGATTCTCACTGGATGAGGTTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: VIKKTQEHLEQG*LLDSHWMRLNI Trigger: AATATTCAACCTCATCCAGTGAGAATCAAGCAGCAACCCTTGTTCAAGATGTTCTTGTGTCTTCTTTATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS TCA 90 bp | GCGGACCATAGAGAGTGGAAAGGAATTCCACATCAGCAAAGTGGTTaGAGACATGGTTTATGCGTCCATGGGTTCTGGGTGTCAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ADHREWKGIPHQQSG*RHGLCVHGFWVSSV Trigger: GACACTTGACACCCAGAACCCATGGACGCATAAACCATGTCTTCAACCACTTTGCTGATGTGGAATTCCTTTCCACTCTCTATGGTCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS GCA 90 bp | TGGTGTCATCAATCAGCATGTTGGCCACAGTTTTGCTGGCTATCTTaGTCAGGATCTTCTTCTGGGCTTGAAGGGCGAGATTCTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WCHQSACWPQFCWLS*SGSSSGLEGRDSWN Trigger: GTTCCAAGAATCTCGCCCTTCAAGCCCAGAAGAAGATCCTGAGCAAGATAGCCAGCAAAACTGTGGCCAACATGCTGATTGATGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS CCA 90 bp | AATTCCACATCAGCAAAGTGGTTGAAGACATGGTTTATGCGTCCATaGGTTCTGGGTGTCAAGTGTCGCTGTACCAGTTCATGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSTSAKWLKTWFMRP*VLGVKCRCTSSCTR Trigger: CCTGGTACATGAACTGGTACAGCGACACTTGACACCCAGAACCCATGGACGCATAAACCATGTCTTCAACCACTTTGCTGATGTGGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTGTTTTGCTGGCTATCTaGCTCAGGATCTTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPGLSFLLKEARSSFFLVLLAI*LRIFFW Trigger: CCAGAAGAAGATCCTGAGCAAGATAGCCAGCAAAAC...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGATGTTGGCCACAGTTTaGCTGGCTATCTTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILVTKVLEASSSSMRHVKMLATV*LAILLR Trigger: CCTGAGCAAGATAGCCAGCAAAACTGTGGCCAACAT...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTTCATGTACCAGGTCCTaGCACTCATGCAGAAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASPGLSFLLKEARSSFFLSCTRS*HSCRSL Trigger: TAAGCTTCTGCATGAGTGCAAGGACCTGGTACATGA...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS GCA 90 bp | GTCAAGTGTCGCTGTACCAGTTCATGTACCAGGTCCTTGCACTCATaGAGAAGCTTAGAGAGCACATTCGTATCAAAGGTATACTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VKCRCTSSCTRSLHS*RSLESTFVSKVYST Trigger: AGTAGAGTATACCTTTGATACGAATGTGCTCTCTAAGCTTCTGCATGAGTGCAAGGACCTGGTACATGAACTGGTACAGCGACACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | ATCCTAGTTACTAAAGTGCTGGAAGCCTCATCTTCCTCAATGAGACACGTGAAGTTGTGGGCCTCCTTCTaGTTGTGGGTGTGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILVTKVLEASSSSMRHVKLWASF*LWVCIS Trigger: AGAAATACACACCCACAACAAGAAGGAGGCCCACAA...CTTCACGTGTCTCATTGAGGAAGATGAGGCTTCCAGCACTTTAGTAACTAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGCAAATCCTCTTGAGATaGGGCCTGCAGTTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: NRLFFAKHSSFRLESSCLQILLR*GLQFPC Trigger: GCATGGAAACTGCAGGCCCAATCTCAAGAGGATTTG...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGTCATCAATCAGCATGTaGGCCACAGTTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NRLFFAKHSSFRLESSCLSSISM*ATVLLA Trigger: AGCCAGCAAAACTGTGGCCAACATGCTGATTGATGA...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | CCCATATTTATTACAGCAATATTCGCAATAGCTGAGAGACAGACTCAAAACACCGCATCCTTCATGATCTaGTGGGCCTCCTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PIFITAIFAIAERQTQNTASFMI*WASFLL Trigger: CAACAAGAAGGAGGCCCACAAGATCATGAAGGATGC...GGTGTTTTGAGTCTGTCTCTCAGCTATTGCGAATATTGCTGTAATAAATATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | AACAGACTATTCTTTGCCAAACACAGTTCGTTTAGACTTGAGAGCTCTTGCCTGACATCAGCAAAGTGGTaGAAGACATGGTTTATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NRLFFAKHSSFRLESSCLTSAKW*KTWFMR Trigger: ACGCATAAACCATGTCTTCAACCACTTTGCTGATGT...CAGGCAAGAGCTCTCAAGTCTAAACGAACTGTGTTTGGCAAAGAATAGTCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | GCATCACCTGGACTCTCATTTCTCTTAAAGGAGGCAAGGAGCTCTTTCTTCCTTTCGTCTAACAATTTATaGATTCCTTCGCAAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASPGLSFLLKEARSSFFLSSNNL*IPSQIL Trigger: GAGGATTTGCGAAGGAATCAATAAATTGTTAGACGA...AAGGAAGAAAGAGCTCCTTGCCTCCTTTAAGAGAAATGAGAGTCCAGGTGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | TACATTACTGGCTCTGTATGCCAAGTAAATGAAACAATCATGTTGAAAACAGGTGATCTTCTTCTGGGCTaGAAGGGCGAGATTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YITGSVCQVNETIMLKTGDLLLG*KGEILG Trigger: TCCAAGAATCTCGCCCTTCAAGCCCAGAAGAAGATC...ACCTGTTTTCAACATGATTGTTTCATTTACTTGGCATACAGAGCCAGTAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS-3UTR CAA 90 bp | TACATTACTGGCTCTGTATGCCAAGTAAATGAAACAATCATGTTGAAAACAGGTTGTATTTCTGTGACTTaGTACAGCTCATCAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: YITGSVCQVNETIMLKTGCISVT*YSSSKI Trigger: GATCTTTGATGAGCTGTACAAAGTCACAGAAATACA...ACCTGTTTTCAACATGATTGTTTCATTTACTTGGCATACAGAGCCAGTAATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS CCA 72 bp | TCAGCAAAGTGGTTGAAGACATGGTTTATGCGTCCATaGGTTCTGGGTGTCAAGTGTCGCTGTACCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAKWLKTWFMRP*VLGVKCRCTSS Trigger: TGAACTGGTACAGCGACACTTGACACCCAGAACCCATGGACGCATAAACCATGTCTTCAACCACTTTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS TCA 72 bp | AGAGAGTGGAAAGGAATTCCACATCAGCAAAGTGGTTaGAGACATGGTTTATGCGTCCATGGGTTCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: REWKGIPHQQSG*RHGLCVHGFWV Trigger: CACCCAGAACCCATGGACGCATAAACCATGTCTTCAACCACTTTGCTGATGTGGAATTCCTTTCCACTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS GCA 72 bp | CGCTGTACCAGTTCATGTACCAGGTCCTTGCACTCATaGAGAAGCTTAGAGAGCACATTCGTATCAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RCTSSCTRSLHS*RSLESTFVSKV Trigger: TACCTTTGATACGAATGTGCTCTCTAAGCTTCTGCATGAGTGCAAGGACCTGGTACATGAACTGGTACAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS CCA 72 bp | TGGTGTCATCAATCAGCATGTTGGCCACAGTTTTGCTaGCTATCTTGCTCAGGATCTTCTTCTGGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WCHQSACWPQFC*LSCSGSSSGLE Trigger: TTCAAGCCCAGAAGAAGATCCTGAGCAAGATAGCCAGCAAAACTGTGGCCAACATGCTGATTGATGACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS CAA 90 bp | ATTGCCACCTTGATAGCATCCTTCATGATCTTGTGGGCCTCCTTCTaGTTGTGGGTGTGTATTTCTGTGACTTTGTACAGCTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IATLIASFMILWASF*LWVCISVTLYSSSK Trigger: CTTTGATGAGCTGTACAAAGTCACAGAAATACACACCCACAACAAGAAGGAGGCCCACAAGATCATGAAGGATGCTATCAAGGTGGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
||
| CDS GCA 72 bp | GAACTGTTTGTTCCGGTAGAGAATGCCAATTTTGATTaGCACCTTGATAGCATCCTTCATGATCTTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELFVPVENANFD*HLDSILHDLVG Trigger: GCCCACAAGATCATGAAGGATGCTATCAAGGTGGCAATCAAAATTGGCATTCTCTACCGGAACAAACAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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| CDS CAA 90 bp | CTGGTTCAGTTTCTTCCGGAGTTTCTCCACAATTATAACCTCCTCTaGACTGAACTGTTTGTTCCGGTAGAGAATGCCAATTTTGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVQFLPEFLHNYNLL*TELFVPVENANFDC Trigger: GCAATCAAAATTGGCATTCTCTACCGGAACAAACAGTTCAGTCAAGAGGAGGTTATAATTGTGGAGAAACTCCGGAAGAAACTGAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
||
| CDS CAA 72 bp | TTTCTTCCGGAGTTTCTCCACAATTATAACCTCCTCTaGACTGAACTGTTTGTTCCGGTAGAGAATGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FLPEFLHNYNLL*TELFVPVENAN Trigger: ATTGGCATTCTCTACCGGAACAAACAGTTCAGTCAAGAGGAGGTTATAATTGTGGAGAAACTCCGGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098760.5 |
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