Pregenerated sensors for TNFAIP8L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044469Ensembl transcript IDs: ENSMUST00000077788.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGTGGGGCGTTGGCACACACCTATCATCCAGCACTCTCGGTGGTaGGGGCAGGAGGCTCAGGAGGTCAAGGTCAGCCTTTGCTACATA | + |
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Preference number: 1 (lower is better) Translates to: TVGRWHTPIIQHSRW*GQEAQEVKVSLCYI Trigger: TATGTAGCAAAGGCTGACCTTGACCTCCTGAGCCTCCTGCCCCCACCACCGAGAGTGCTGGATGATAGGTGTGTGCCAACGCCCCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 90 bp | CAGCAGGAGAAACAGAGGAGAGACTACCCCAGGCACAGGCAGTTCTaGGTTCTTGGGGACCGTCACCAGTGGAGGATAGTCTCCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QQEKQRRDYPRHRQF*VLGDRHQWRIVSRW Trigger: CCACCTGGAGACTATCCTCCACTGGTGACGGTCCCCAAGAACTCAGAACTGCCTGTGCCTGGGGTAGTCTCTCCTCTGTTTCTCCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 90 bp | GTGTCTCCAGTGGCTTTACCCTGGTCCGAAGCTGGGGACAGCCTCTaGGGTCCCCATGTTTCACAGCAAGTCCTGTACTATCACTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: VSPVALPWSEAGDSL*GPHVSQQVLYYHSV Trigger: CACTGAGTGATAGTACAGGACTTGCTGTGAAACATGGGGACCCCAGAGGCTGTCCCCAGCTTCGGACCAGGGTAAAGCCACTGGAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 90 bp | GTAACACATGCTCGTGTCTCCAGTGGCTTTACCCTGGTCCGAAGCTaGGGACAGCCTCTGGGGTCCCCATGTTTCACAGCAAGTCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: VTHARVSSGFTLVRS*GQPLGSPCFTASPV Trigger: TACAGGACTTGCTGTGAAACATGGGGACCCCAGAGGCTGTCCCCAGCTTCGGACCAGGGTAAAGCCACTGGAGACACGAGCATGTGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 90 bp | TCACAGCAAGTCCTGTACTATCACTCAGTGAAGACCCCACATTTCTaGCTGATTAGCGCCTCCTTGCTGAGTGGTCAGGGCCCTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: SQQVLYYHSVKTPHF*LISASLLSGQGPAM Trigger: CATGGCAGGGCCCTGACCACTCAGCAAGGAGGCGCTAATCAGGCAGAAATGTGGGGTCTTCACTGAGTGATAGTACAGGACTTGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 90 bp | AGAGAAGCCACGATCTGCCGCACAGCATCTGTCTGCTGGTGTTCTTaGTTTGCAGTAGCATCACTCCTCAGTGTCCAGTGTCCTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: REATICRTASVCWCS*FAVASLLSVQCPAA Trigger: TGCTGCAGGACACTGGACACTGAGGAGTGATGCTACTGCAAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAGATCGTGGCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 90 bp | CCACAGGCACACTCAGATAGTAGAGGCTGCAGGCTTTCACATGCGTaGTCAGTGTCAGTTACCAACTCGGTACCATTCAAAGAGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: PQAHSDSRGCRLSHA*SVSVTNSVPFKEKR Trigger: TCTTTTCTCTTTGAATGGTACCGAGTTGGTAACTGACACTGACCACGCATGTGAAAGCCTGCAGCCTCTACTATCTGAGTGTGCCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 90 bp | TCAGGGGAGTACAATTCTTGTCTCCCAATTCTCCACAACCTTATTTaGAAGACTGAGAATGTCCAGACAGTGGGGCGTTGGCACACACCT | + |
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Preference number: 1 (lower is better) Translates to: SGEYNSCLPILHNLI*KTENVQTVGRWHTP Trigger: AGGTGTGTGCCAACGCCCCACTGTCTGGACATTCTCAGTCTTTCAAATAAGGTTGTGGAGAATTGGGAGACAAGAATTGTACTCCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 90 bp | GTACAATTCTTGTCTCCCAATTCTCCACAACCTTATTTGAAAGACTaGGAATGTCCAGACAGTGGGGCGTTGGCACACACCTATCATCCA | + |
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Preference number: 1 (lower is better) Translates to: VQFLSPNSPQPYLKD*ECPDSGALAHTYHP Trigger: TGGATGATAGGTGTGTGCCAACGCCCCACTGTCTGGACATTCTCAGTCTTTCAAATAAGGTTGTGGAGAATTGGGAGACAAGAATTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 90 bp | GTAGCTGAAGTCTGCTTTCCAAGGATAAAAGATCTAAGTACCAGTTaGGTTAAGCCAGTTAACGGTGTCTCACATGACCACAGGCACACT | + |
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Preference number: 1 (lower is better) Translates to: VAEVCFPRIKDLSTS*VKPVNGVSHDHRHT Trigger: AGTGTGCCTGTGGTCATGTGAGACACCGTTAACTGGCTTAACCCAACTGGTACTTAGATCTTTTATCCTTGGAAAGCAGACTTCAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 90 bp | TTTGGTAAACTCCAGACAAGTTTGGTGACAAGCATTCTTACATGCTaGGCCATCTCACCGGCTCTATTTATTTCTTCTCTTCAATGCGAG | + |
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Preference number: 1 (lower is better) Translates to: FGKLQTSLVTSILTC*AISPALFISSLQCE Trigger: CTCGCATTGAAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATGCTTGTCACCAAACTTGTCTGGAGTTTACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CCA 90 bp | CGCCTCCTTGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGCAGCACTCTCGGTGGTaGGGGCAGGAGGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RLLAEWSGPCHVSKHRKPQHSRW*GQEAQE Trigger: CTCCTGAGCCTCCTGCCCCCACCACCGAGAGTGCTG...CGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CAA 90 bp | CTCTCGGTGGTGGGGGCAGGAGGCTCAGGAGGTCAAGGTCAGCCTTaGCTACATAGGGTGTTTGGGGTCAGCCTGGGCTACATGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: LSVVGAGGSGGQGQP*LHRVFGVSLGYMRP Trigger: AGGTCTCATGTAGCCCAGGCTGACCCCAAACACCCTATGTAGCAAAGGCTGACCTTGACCTCCTGAGCCTCCTGCCCCCACCACCGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCCTCCACAGCTGTGCCAGCCCCTCCACAGACTCGATCTTCACAGATCTTGGAGGATTCTAGGCTaGGCTCCACCCCTGACCATG | + |
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Preference number: 2 (lower is better) Translates to: PAPPQLCQPLHRLDLHRSWRILG*APPLTM Trigger: CATGGTCAGGGGTGGAGCCCAGCCTAGAATCCTCCA...AGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAGCTGTGGAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | CGGAAGCCGCGGTGTGGTTCTGTGTGGGCACATCCACATGGAGGTCAGAGGCCACACCTTGGGACGACCTaGGGCTTAGGAAACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: RKPRCGSVWAHPHGGQRPHLGTT*GLGNKH Trigger: ATGTTTGTTTCCTAAGCCTCAGGTCGTCCCAAGGTG...TGGCCTCTGACCTCCATGTGGATGTGCCCACACAGAACCACACCGCGGCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CCA 90 bp | CCATGTTTCCAAGCACCGGAAGCCGCGGTGTGGTTCTGTGTGGGCACATCCACAAGTGTCCTGCAGCATTaGCAGAGTGAGCCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PCFQAPEAAVWFCVGTSTSVLQH*QSEPSW Trigger: CCAGGAAGGCTCACTCTGCCAATGCTGCAGGACACT...TGTGGATGTGCCCACACAGAACCACACCGCGGCTTCCGGTGCTTGGAAACATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CCA 90 bp | GTTAACGGTGTCTCACATGACCACAGGCACACTCAGATAGTAGAGGCTGCAGGCCGCCTCCTTGCTGAGTaGTCAGGGCCCTGCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: VNGVSHDHRHTQIVEAAGRLLAE*SGPCHV Trigger: AACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCG...GCCTGCAGCCTCTACTATCTGAGTGTGCCTGTGGTCATGTGAGACACCGTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CAA 90 bp | GAGAGAAGCCACGATCTGCCGCACAGCATCTGTCTGCTGGTGTTCTaGGTTTGCAGTAGCATCACTCCTCAGTGTCCAGTGTCCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ERSHDLPHSICLLVF*VCSSITPQCPVSCS Trigger: GCTGCAGGACACTGGACACTGAGGAGTGATGCTACTGCAAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAGATCGTGGCTTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CAA 90 bp | TATCACTCAGTGAAGACCCCACATTTCTGCCTGATTAGCGCCTCCTaGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGCACCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: YHSVKTPHFCLISAS*LSGQGPAMFPSTGS Trigger: GCTTCCGGTGCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCGCTAATCAGGCAGAAATGTGGGGTCTTCACTGAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCCTCCACAGCTGTGCCAGCCCCTCCACAGACTCGATCTTCACAGATCTTCCTTTCAAAACCATTaGGAGAAGCCACGATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PAPPQLCQPLHRLDLHRSSFQNH*EKPRSA Trigger: GGCAGATCGTGGCTTCTCTCAATGGTTTTGAAAGGA...AGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAGCTGTGGAGGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGGAGACGAAGCAGAAGCTAGACAAAAGCAGATAAGTTACAGCAGGAGAAGGCACAGGCAGTTCTaGGTTCTTGGGGACCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RSGDEAEARQKQISYSRRRHRQF*VLGDRH Trigger: GTGACGGTCCCCAAGAACTCAGAACTGCCTGTGCCT...TCTCCTGCTGTAACTTATCTGCTTTTGTCTAGCTTCTGCTTCGTCTCCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR GCA 90 bp | TGCATGCTACCCCTGAGCCAAGCTTCTGACCTGGGGATTCTAGGTACATCTATCTCAGATAGTAGAGGCTaGAGGCTTTCACATGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: CMLPLSQASDLGILGTSISDSRG*RLSHAW Trigger: CCACGCATGTGAAAGCCTGCAGCCTCTACTATCTGA...GATAGATGTACCTAGAATCCCCAGGTCAGAAGCTTGGCTCAGGGGTAGCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCCCTCCACAGCTGTGCCAGCCCCTCCACAGACTCGATCTTCACAGATCTTGTGTAGCTGAAGTCTaGTTTCCAAGGATAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PAPPQLCQPLHRLDLHRSCVAEV*FPRIKD Trigger: ATCTTTTATCCTTGGAAAGCAGACTTCAGCTACACA...AGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAGCTGTGGAGGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCTACCCCTGAGCCAAGCTTCTGACCTGGGGATTCTAGGTACATCTATCCCTTATTTGAAAGACTaGGAATGTCCAGACAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CMLPLSQASDLGILGTSIPYLKD*ECPDSG Trigger: CCCACTGTCTGGACATTCTCAGTCTTTCAAATAAGG...GATAGATGTACCTAGAATCCCCAGGTCAGAAGCTTGGCTCAGGGGTAGCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | CATTCTTACATGCTGAGCCATCTCACCGGCTCTATTTATTTCTTCTCTTCAATGGCAGCATTGGCAGAGTaGGCCTTCCTGGGCCAATCT | + |
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Preference number: 2 (lower is better) Translates to: HSYMLSHLTGSIYFFSSMAALAE*AFLGQS Trigger: AGATTGGCCCAGGAAGGCTCACTCTGCCAATGCTGC...CATTGAAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR TCA 90 bp | TCTGCACATTTTGTGTCCTCTCCCAATGCCCCAGATAGCCTTTCCATCGGCAGCGGTACAACAAGAGTTTaGACTCCATTTTCTAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SAHFVSSPNAPDSLSIGSGTTRV*TPFSKA Trigger: TGCTTTAGAAAATGGAGTTCAAACTCTTGTTGTACC...GCTGCCGATGGAAAGGCTATCTGGGGCATTGGGAGAGGACACAAAATGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCATTCTTACATGCTGAGCCATCTCACCGGCTCTATTTATTTCTTCTCTTCAACACCGAAGTGTGCTTaGAGTCTCTCCTTTCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KHSYMLSHLTGSIYFFSSTPKCA*SLSFQN Trigger: GTTTTGAAAGGAGAGACTCCAAGCACACTTCGGTGT...TGAAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 72 bp | GGGCGTTGGCACACACCTATCATCCAGCACTCTCGGTaGTGGGGGCAGGAGGCTCAGGAGGTCAAGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GRWHTPIIQHSR*WGQEAQEVKVS Trigger: GCTGACCTTGACCTCCTGAGCCTCCTGCCCCCACCACCGAGAGTGCTGGATGATAGGTGTGTGCCAACGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 72 bp | GCTCGTGTCTCCAGTGGCTTTACCCTGGTCCGAAGCTaGGGACAGCCTCTGGGGTCCCCATGTTTCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: ARVSSGFTLVRS*GQPLGSPCFTA Trigger: TGCTGTGAAACATGGGGACCCCAGAGGCTGTCCCCAGCTTCGGACCAGGGTAAAGCCACTGGAGACACGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CAA 90 bp | AGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGCGGTGTGGTTCTGTGTGGGCGGTCAAGGTCAGCCTTaGCTACATAGGGTGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RALPCFQAPEAAVWFCVGGQGQP*LHRVFG Trigger: CCCAAACACCCTATGTAGCAAAGGCTGACCTTGACC...GCCCACACAGAACCACACCGCGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CAA 90 bp | AGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGCGGTGTGGTTCTGTGTGGGCAACAAACATAGTCATTaGGCAGGGGTAAGGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RALPCFQAPEAAVWFCVGNKHSH*AGVRVR Trigger: CCTGACCCTTACCCCTGCCAAATGACTATGTTTGTT...GCCCACACAGAACCACACCGCGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 72 bp | GTGGCTTTACCCTGGTCCGAAGCTGGGGACAGCCTCTaGGGTCCCCATGTTTCACAGCAAGTCCTGTACTAT | + |
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Preference number: 3 (lower is better) Translates to: VALPWSEAGDSL*GPHVSQQVLYY Trigger: ATAGTACAGGACTTGCTGTGAAACATGGGGACCCCAGAGGCTGTCCCCAGCTTCGGACCAGGGTAAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | GTTTGCAGTAGCATCACTCCTCAGTGTCCAGTGTCCTaGAGCATTGGCAGAGTGAGCCTTCCTGGGCCAATC | + |
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Preference number: 3 (lower is better) Translates to: VCSSITPQCPVS*SIGRVSLPGPI Trigger: GATTGGCCCAGGAAGGCTCACTCTGCCAATGCTGCAGGACACTGGACACTGAGGAGTGATGCTACTGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | CTGCCGCACAGCATCTGTCTGCTGGTGTTCTTGGTTTaGAGTAGCATCACTCCTCAGTGTCCAGTGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LPHSICLLVFLV*SSITPQCPVSC Trigger: GCAGGACACTGGACACTGAGGAGTGATGCTACTGCAAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | GTCCTGTACTATCACTCAGTGAAGACCCCACATTTCTaGCTGATTAGCGCCTCCTTGCTGAGTGGTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: VLYYHSVKTPHF*LISASLLSGQG Trigger: GCCCTGACCACTCAGCAAGGAGGCGCTAATCAGGCAGAAATGTGGGGTCTTCACTGAGTGATAGTACAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 72 bp | ACGATCTGCCGCACAGCATCTGTCTGCTGGTGTTCTTaGTTTGCAGTAGCATCACTCCTCAGTGTCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: TICRTASVCWCS*FAVASLLSVQC Trigger: ACACTGGACACTGAGGAGTGATGCTACTGCAAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAGATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CAA 90 bp | CCATGTTTCCAAGCACCGGAAGCCGCGGTGTGGTTCTGTGTGGGCACATCCACATCCACCACACAGATTTaGGTAAACTCCAGACAAGTT | + |
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Preference number: 3 (lower is better) Translates to: PCFQAPEAAVWFCVGTSTSTTQI*VNSRQV Trigger: AACTTGTCTGGAGTTTACCAAAATCTGTGTGGTGGA...TGTGGATGTGCCCACACAGAACCACACCGCGGCTTCCGGTGCTTGGAAACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 72 bp | CCGAAGTGTGCTTGGAGTCTCTCCTTTCAAAACCATTaGGAGAAGCCACGATCTGCCGCACAGCATCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: PKCAWSLSFQNH*EKPRSAAQHLS Trigger: AGACAGATGCTGTGCGGCAGATCGTGGCTTCTCTCAATGGTTTTGAAAGGAGAGACTCCAAGCACACTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 72 bp | CTTTGTACTTGCATCTGTCTGCATACACTGAAACATTaGGGCAGTGACTCCCACCCGTCACCACAGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LCTCICLHTLKH*GSDSHPSPQAP Trigger: TGGAGCCTGTGGTGACGGGTGGGAGTCACTGCCTCAATGTTTCAGTGTATGCAGACAGATGCAAGTACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCCAGCTTTCTAAGACTCCATCCACCACACAGATTTTGGTAAACTCCAGATGCTACATAGGGTGTTaGGGGTCAGCCTGGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: RGQLSKTPSTTQILVNSRCYIGC*GSAWAT Trigger: TGTAGCCCAGGCTGACCCCAAACACCCTATGTAGCA...TCTGGAGTTTACCAAAATCTGTGTGGTGGATGGAGTCTTAGAAAGCTGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | TCCCACCCGTCACCACAGGCTCCAGGTTGTACACATTaGCTTAAATACACTCAGCTCTGCACATTTTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SHPSPQAPGCTH*LKYTQLCTFCV Trigger: GACACAAAATGTGCAGAGCTGAGTGTATTTAAGGCAATGTGTACAACCTGGAGCCTGTGGTGACGGGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 72 bp | TTGTCTCCCAATTCTCCACAACCTTATTTGAAAGACTaGGAATGTCCAGACAGTGGGGCGTTGGCACACACC | + |
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Preference number: 3 (lower is better) Translates to: LSPNSPQPYLKD*ECPDSGALAHT Trigger: GGTGTGTGCCAACGCCCCACTGTCTGGACATTCTCAGTCTTTCAAATAAGGTTGTGGAGAATTGGGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | TCTCTCCTTTCAAAACCATTGAGAGAAGCCACGATCTaGCGCACAGCATCTGTCTGCTGGTGTTCTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SLLSKPLREATI*RTASVCWCSWF Trigger: AAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAGATCGTGGCTTCTCTCAATGGTTTTGAAAGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR GCA 72 bp | TCCCCTAACAGGACCTCAGATCCCAACACCGAAGTGTaGTTGGAGTCTCTCCTTTCAAAACCATTGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SPNRTSDPNTEV*LESLLSKPLRE Trigger: TTCTCTCAATGGTTTTGAAAGGAGAGACTCCAAGCACACTTCGGTGTTGGGATCTGAGGTCCTGTTAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCCAGCTTTCTAAGACTCCATCCACCACACAGATTTTGGTAAACTCCAGATGTCTGCTGGTGTTCTaGGTTTGCAGTAGCATCACT | + |
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Preference number: 3 (lower is better) Translates to: RGQLSKTPSTTQILVNSRCLLVF*VCSSIT Trigger: AGTGATGCTACTGCAAACCAAGAACACCAGCAGACA...TCTGGAGTTTACCAAAATCTGTGTGGTGGATGGAGTCTTAGAAAGCTGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 72 bp | ACTCCATTTTCTAAAGCAAGTCACCTTGGGACGACCTaGGGCTTAGGAAACAAACATAGTCATTTGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TPFSKASHLGTT*GLGNKHSHLAG Trigger: CCCTGCCAAATGACTATGTTTGTTTCCTAAGCCTCAGGTCGTCCCAAGGTGACTTGCTTTAGAAAATGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR CCA 72 bp | GTCTGCTTTCCAAGGATAAAAGATCTAAGTACCAGTTaGGTTAAGCCAGTTAACGGTGTCTCACATGACCAC | + |
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Preference number: 3 (lower is better) Translates to: VCFPRIKDLSTS*VKPVNGVSHDH Trigger: GTGGTCATGTGAGACACCGTTAACTGGCTTAACCCAACTGGTACTTAGATCTTTTATCCTTGGAAAGCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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| 3UTR TCA 72 bp | CTCCAGACAAGTTTGGTGACAAGCATTCTTACATGCTaGGCCATCTCACCGGCTCTATTTATTTCTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQTSLVTSILTC*AISPALFISSL Trigger: AAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATGCTTGTCACCAAACTTGTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR TCA 72 bp | CAACTAACCCACACCTCAGCTAGACACATGTGTAGCTaGAGTCTGCTTTCCAAGGATAAAAGATCTAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QLTHTSARHMCS*SLLSKDKRSKY Trigger: GTACTTAGATCTTTTATCCTTGGAAAGCAGACTTCAGCTACACATGTGTCTAGCTGAGGTGTGGGTTAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGCATTCTTACATGCTGAGCCATCTCACCGGCTCTATTTATTTCTTCTCTTCAAGGGGAGTACAATTCTaGTCTCCCAATTCTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KHSYMLSHLTGSIYFFSSRGVQF*SPNSPQ Trigger: TTGTGGAGAATTGGGAGACAAGAATTGTACTCCCCT...TGAAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTTGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGCCGGTAGGGCTCTGCTaGGCTGTACAGCGCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLAEWSGPCHVSKHRKPPVGLC*AVQRGQ Trigger: CTGGCCGCGCTGTACAGCCCAGCAGAGCCCTACCGG...CGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR TCA 90 bp | GCGAGGGTCCAGTCCCCTAACAGGACCTCAGATCCCAACACCGAAGTGTGCTTGCTACCTGGTGGAAGCTaGGGGCTGTCATGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARVQSPNRTSDPNTEVCLLPGGS*GLSWPG Trigger: GCCTGGCCATGACAGCCCTCAGCTTCCACCAGGTAG...CAAGCACACTTCGGTGTTGGGATCTGAGGTCCTGTTAGGGGACTGGACCCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCTCCACAGCTGTGCCAGCCCCTCCACAGACTCGATCTTCACAGATCTGGGCCAATAGCCTGGTaGAACAGGTCCCTGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPPQLCQPLHRLDLHRSGPIAW*NRSLHS Trigger: GGAGTGCAGGGACCTGTTGCACCAGGCTATTGGCCC...AGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAGCTGTGGAGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTTGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGTCATTGCTGTCCAGCTaGTCCGCCCTCAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: RLLAEWSGPCHVSKHRKPSLLSS*SALSNT Trigger: TGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGA...CGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR GCA 90 bp | GTTAACGGTGTCTCACATGACCACAGGCACACTCAGATAGTAGAGGCTGCAGGCCGGCCCCGGAACCGCTaGAGCTGGGCCAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VNGVSHDHRHTQIVEAAGRPRNR*SWASSL Trigger: CAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCG...GCCTGCAGCCTCTACTATCTGAGTGTGCCTGTGGTCATGTGAGACACCGTTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTTGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGCACCGGAAGCCGAAGGTGAAGTCTACCTaGTGGAAGCTGAGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLLAEWSGPCHVSKHRKPKVKST*WKLRAV Trigger: GACAGCCCTCAGCTTCCACCAGGTAGACTTCACCTT...CGGCTTCCGGTGCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR CAA 72 bp | GTGAAGACCCCACATTTCTGCCTGATTAGCGCCTCCTaGCTGAGTGGTCAGGGCCCTGCCATGTTTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKTPHFCLISAS*LSGQGPAMFPS Trigger: GCTTGGAAACATGGCAGGGCCCTGACCACTCAGCAAGGAGGCGCTAATCAGGCAGAAATGTGGGGTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR CAA 72 bp | CACGATCTGCCGCACAGCATCTGTCTGCTGGTGTTCTaGGTTTGCAGTAGCATCACTCCTCAGTGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HDLPHSICLLVF*VCSSITPQCPV Trigger: CACTGGACACTGAGGAGTGATGCTACTGCAAACCAAGAACACCAGCAGACAGATGCTGTGCGGCAGATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGAGACGAAGCAGAAGCTAGACAAAAGCAGATAAGTTACAGCAGGAGACTGAGGACTTTCTTCTaGGCCTGCAGGGCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSGDEAEARQKQISYSRRLRTFF*ACRARL Trigger: GAGCCTGGCCCTGCAGGCCCAGAAGAAAGTCCTCAG...TCTCCTGCTGTAACTTATCTGCTTTTGTCTAGCTTCTGCTTCGTCTCCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTACATGAGACCTGTCTCAGAAGTAAGAAGAGGAGGTCAGGAGACGAACAAACACAGCCACCATaGCCTTGGAAGCCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLHETCLRSKKRRSGDEQTQPP*PWKPSC Trigger: GCAAGATGGCTTCCAAGGCCATGGTGGCTGTGTTTG...TTCGTCTCCTGACCTCCTCTTCTTACTTCTGAGACAGGTCTCATGTAGCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR CAA 72 bp | ACCGAAGTGTGCTTGGAGTCTCTCCTTTCAAAACCATaGAGAGAAGCCACGATCTGCCGCACAGCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVCLESLLSKP*REATICRTASV Trigger: GACAGATGCTGTGCGGCAGATCGTGGCTTCTCTCAATGGTTTTGAAAGGAGAGACTCCAAGCACACTTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CCA 90 bp | CATGAGACCTGTCTCAGAAGTAAGAAGAGGAGGTCAGGAGACGAAGCAGAAGCTAACTCCTTCGTGGCCTaGTACAGTTCATCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HETCLRSKKRRSGDEAEANSFVA*YSSSKT Trigger: GGTCTTGGATGAACTGTACCAGGCCACGAAGGAGTT...AGCTTCTGCTTCGTCTCCTGACCTCCTCTTCTTACTTCTGAGACAGGTCTCATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR CAA 72 bp | CCTAACAGGACCTCAGATCCCAACACCGAAGTGTGCTaGGAGTCTCTCCTTTCAAAACCATTGAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNRTSDPNTEVC*ESLLSKPLREA Trigger: GGCTTCTCTCAATGGTTTTGAAAGGAGAGACTCCAAGCACACTTCGGTGTTGGGATCTGAGGTCCTGTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| 3UTR CAA 72 bp | CATTTGGCAGGGGTAAGGGTCAGGGGAGTACAATTCTaGTCTCCCAATTCTCCACAACCTTATTTGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLAGVRVRGVQF*SPNSPQPYLKD Trigger: GTCTTTCAAATAAGGTTGTGGAGAATTGGGAGACAAGAATTGTACTCCCCTGACCCTTACCCCTGCCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 90 bp | CTGAGGGCTGTCATGGCCAGGCTGCGGACGCGGCCCCGGAACCGCTaGAGCTGGGCCAGCTCATTGCTGTCCAGCTGGTCCGCCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRAVMARLRTRPRNR*SWASSLLSSWSALS Trigger: GCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCCTGGCCATGACAGCCCTCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 90 bp | GGCTGCGGACGCGGCCCCGGAACCGCTGCAGCTGGGCCAGCTCATTaGTGTCCAGCTGGTCCGCCCTCAGCAACACAGCCAGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGRGPGTAAAGPAH*CPAGPPSATQPASQ Trigger: CTGTGAAGCTGGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 90 bp | GCTGTCATGGCCAGGCTGCGGACGCGGCCCCGGAACCGCTGCAGCTaGGCCAGCTCATTGCTGTCCAGCTGGTCCGCCCTCAGCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: AVMARLRTRPRNRCS*ASSLLSSWSALSNT Trigger: TGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCCTGGCCATGACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 90 bp | ATGCGGCCGTGGGACTTGGCAGTGAGGTGCGGGCCAATAGCCTGGTaGAACAGGTCCCTGCACTCCAGCAGCCCAGTGGCCAGCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: MRPWDLAVRCGPIAW*NRSLHSSSPVASTR Trigger: GCGTGTGCTGGCCACTGGGCTGCTGGAGTGCAGGGACCTGTTGCACCAGGCTATTGGCCCGCACCTCACTGCCAAGTCCCACGGCCGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 90 bp | CGGCCCCGGAACCGCTGCAGCTGGGCCAGCTCATTGCTGTCCAGCTaGTCCGCCCTCAGCAACACAGCCAGCTTCACAGCCACCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RPRNRCSWASSLLSS*SALSNTASFTATFT Trigger: GGTGAAGGTGGCTGTGAAGCTGGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 90 bp | TTGATGCGGCCGTGGGACTTGGCAGTGAGGTGCGGGCCAATAGCCTaGTGCAACAGGTCCCTGCACTCCAGCAGCCCAGTGGCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LMRPWDLAVRCGPIA*CNRSLHSSSPVAST Trigger: TGTGCTGGCCACTGGGCTGCTGGAGTGCAGGGACCTGTTGCACCAGGCTATTGGCCCGCACCTCACTGCCAAGTCCCACGGCCGCATCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 90 bp | CCCGAGGCCATCACAGATGCGGCACAGATGGCTCCGGTAGGGCTCTaGTGGGCTGTACAGCGCGGCCAGGAAGTCACCATTGGCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PEAITDAAQMAPVGL*WAVQRGQEVTIGKV Trigger: CACTTTGCCAATGGTGACTTCCTGGCCGCGCTGTACAGCCCAGCAGAGCCCTACCGGAGCCATCTGTGCCGCATCTGTGATGGCCTCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 90 bp | GAGGCCATCACAGATGCGGCACAGATGGCTCCGGTAGGGCTCTGCTaGGCTGTACAGCGCGGCCAGGAAGTCACCATTGGCAAAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EAITDAAQMAPVGLC*AVQRGQEVTIGKVT Trigger: AGTCACTTTGCCAATGGTGACTTCCTGGCCGCGCTGTACAGCCCAGCAGAGCCCTACCGGAGCCATCTGTGCCGCATCTGTGATGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 90 bp | AGCCAGCTTCACAGCCACCTTCACCAGGTTCTTCACTACCCTCTGTaGCTCCTTCCGGCTGCGCGTGAACTCCTTCGTGGCCTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SQLHSHLHQVLHYPL*LLPAARELLRGLVQ Trigger: CTGTACCAGGCCACGAAGGAGTTCACGCGCAGCCGGAAGGAGGCACAGAGGGTAGTGAAGAACCTGGTGAAGGTGGCTGTGAAGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCTCCACAGCTGTGCCAGCCCCTCCACAGACTCGATCTTCACAGATCTACAGCCACCATGGCCTaGGAAGCCATCTTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPPQLCQPLHRLDLHRSTATMA*EAILLR Trigger: CCTCAGCAAGATGGCTTCCAAGGCCATGGTGGCTGT...AGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAGCTGTGGAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS TCA 90 bp | TCACCAGGTTCTTCACTACCCTCTGTGCCTCCTTCCGGCTGCGCGTaGACTCCTTCGTGGCCTGGTACAGTTCATCCAAGACCTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSSLPSVPPSGCA*TPSWPGTVHPRPHC Trigger: GCAGTGAGGTCTTGGATGAACTGTACCAGGCCACGAAGGAGTTCACGCGCAGCCGGAAGGAGGCACAGAGGGTAGTGAAGAACCTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGGAGGCTCAGGAGGTCAAGGTCAGCCTTTGCTACATAGGGTGTTTGGGGCCTTGGAAGCCATCTaGCTGAGGACTTTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGGSGGQGQPLLHRVFGALEAI*LRTFFW Trigger: CCAGAAGAAAGTCCTCAGCAAGATGGCTTCCAAGGC...CCCAAACACCCTATGTAGCAAAGGCTGACCTTGACCTCCTGAGCCTCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CAA 90 bp | AGAGGCCAGCTTTCTAAGACTCCATCCACCACACAGATTTTGGTAAACTCCAGAATGCGGCCGTGGGACTaGGCAGTGAGGTGCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGQLSKTPSTTQILVNSRMRPWD*AVRCGP Trigger: TGGCCCGCACCTCACTGCCAAGTCCCACGGCCGCAT...TCTGGAGTTTACCAAAATCTGTGTGGTGGATGGAGTCTTAGAAAGCTGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS-3UTR CAA 90 bp | CATTCTTACATGCTGAGCCATCTCACCGGCTCTATTTATTTCTTCTCTTCAATGACCTCACTGCTGGTATaGTCCACAAACACAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HSYMLSHLTGSIYFFSSMTSLLV*STNTAT Trigger: GGTGGCTGTGTTTGTGGACAATACCAGCAGTGAGGT...CATTGAAGAGAAGAAATAAATAGAGCCGGTGAGATGGCTCAGCATGTAAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 72 bp | GCCAGGCTGCGGACGCGGCCCCGGAACCGCTGCAGCTaGGCCAGCTCATTGCTGTCCAGCTGGTCCGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARLRTRPRNRCS*ASSLLSSWSAL Trigger: GAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCCTGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | GTCATGGCCAGGCTGCGGACGCGGCCCCGGAACCGCTaGAGCTGGGCCAGCTCATTGCTGTCCAGCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VMARLRTRPRNR*SWASSLLSSWS Trigger: GGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCCTGGCCATGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | CGCGGCCCCGGAACCGCTGCAGCTGGGCCAGCTCATTaGTGTCCAGCTGGTCCGCCCTCAGCAACACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGPGTAAAGPAH*CPAGPPSATQP Trigger: TGGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 72 bp | ACGCGGCCCCGGAACCGCTGCAGCTGGGCCAGCTCATaGCTGTCCAGCTGGTCCGCCCTCAGCAACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRPRNRCSWASS*LSSWSALSNTA Trigger: GGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 90 bp | AGGCTGCGGACGCGGCCCCGGAACCGCTGCAGCTGGGCCAGCTCATaGCTGTCCAGCTGGTCCGCCCTCAGCAACACAGCCAGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RLRTRPRNRCSWASS*LSSWSALSNTASFT Trigger: TGTGAAGCTGGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTTCCGGGGCCGCGTCCGCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | CACCCTCGTCCAACATCCTCCCGAGGCCATCACAGATaGGGCACAGATGGCTCCGGTAGGGCTCTGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPRPTSSRGHHR*GTDGSGRALLG Trigger: GCCCAGCAGAGCCCTACCGGAGCCATCTGTGCCGCATCTGTGATGGCCTCGGGAGGATGTTGGACGAGGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 72 bp | CCGTGGGACTTGGCAGTGAGGTGCGGGCCAATAGCCTaGTGCAACAGGTCCCTGCACTCCAGCAGCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWDLAVRCGPIA*CNRSLHSSSPV Trigger: CACTGGGCTGCTGGAGTGCAGGGACCTGTTGCACCAGGCTATTGGCCCGCACCTCACTGCCAAGTCCCACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 72 bp | AACCGCTGCAGCTGGGCCAGCTCATTGCTGTCCAGCTaGTCCGCCCTCAGCAACACAGCCAGCTTCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NRCSWASSLLSS*SALSNTASFTA Trigger: GGCTGTGAAGCTGGCTGTGTTGCTGAGGGCGGACCAGCTGGACAGCAATGAGCTGGCCCAGCTGCAGCGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 72 bp | ACAGATGCGGCACAGATGGCTCCGGTAGGGCTCTGCTaGGCTGTACAGCGCGGCCAGGAAGTCACCATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TDAAQMAPVGLC*AVQRGQEVTIG Trigger: GCCAATGGTGACTTCCTGGCCGCGCTGTACAGCCCAGCAGAGCCCTACCGGAGCCATCTGTGCCGCATCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | CACAGCCACCTTCACCAGGTTCTTCACTACCCTCTGTaGCTCCTTCCGGCTGCGCGTGAACTCCTTCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSHLHQVLHYPL*LLPAARELLRG Trigger: GCCACGAAGGAGTTCACGCGCAGCCGGAAGGAGGCACAGAGGGTAGTGAAGAACCTGGTGAAGGTGGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | ATCACAGATGCGGCACAGATGGCTCCGGTAGGGCTCTaGTGGGCTGTACAGCGCGGCCAGGAAGTCACCATT | + |
|
Preference number: 6 (lower is better) Translates to: ITDAAQMAPVGL*WAVQRGQEVTI Trigger: AATGGTGACTTCCTGGCCGCGCTGTACAGCCCAGCAGAGCCCTACCGGAGCCATCTGTGCCGCATCTGTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS TCA 72 bp | CAAACACAGCCACCATGGCCTTGGAAGCCATCTTGCTaGGGACTTTCTTCTGGGCCTGCAGGGCCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QTQPPWPWKPSC*GLSSGPAGPGS Trigger: AGAGCCTGGCCCTGCAGGCCCAGAAGAAAGTCCTCAGCAAGATGGCTTCCAAGGCCATGGTGGCTGTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 72 bp | TCCACAAACACAGCCACCATGGCCTTGGAAGCCATCTaGCTGAGGACTTTCTTCTGGGCCTGCAGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STNTATMALEAI*LRTFFWACRAR Trigger: CCTGGCCCTGCAGGCCCAGAAGAAAGTCCTCAGCAAGATGGCTTCCAAGGCCATGGTGGCTGTGTTTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS TCA 72 bp | TCTTCACTACCCTCTGTGCCTCCTTCCGGCTGCGCGTaGACTCCTTCGTGGCCTGGTACAGTTCATCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLPSVPPSGCA*TPSWPGTVHPR Trigger: TCTTGGATGAACTGTACCAGGCCACGAAGGAGTTCACGCGCAGCCGGAAGGAGGCACAGAGGGTAGTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS GCA 72 bp | CCTTCGTGGCCTGGTACAGTTCATCCAAGACCTCACTaGTGGTATTGTCCACAAACACAGCCACCATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSWPGTVHPRPH*WYCPQTQPPWP Trigger: AGGCCATGGTGGCTGTGTTTGTGGACAATACCAGCAGTGAGGTCTTGGATGAACTGTACCAGGCCACGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CCA 72 bp | TCGTGGCCTGGTACAGTTCATCCAAGACCTCACTGCTaGTATTGTCCACAAACACAGCCACCATGGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWPGTVHPRPHC*YCPQTQPPWPW Trigger: CCAAGGCCATGGTGGCTGTGTTTGTGGACAATACCAGCAGTGAGGTCTTGGATGAACTGTACCAGGCCACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 72 bp | CTGCTGGTATTGTCCACAAACACAGCCACCATGGCCTaGGAAGCCATCTTGCTGAGGACTTTCTTCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLSTNTATMA*EAILLRTFFWA Trigger: GGCCCAGAAGAAAGTCCTCAGCAAGATGGCTTCCAAGGCCATGGTGGCTGTGTTTGTGGACAATACCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 72 bp | GCCTGGTACAGTTCATCCAAGACCTCACTGCTGGTATaGTCCACAAACACAGCCACCATGGCCTTGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AWYSSSKTSLLV*STNTATMALEA Trigger: GGCTTCCAAGGCCATGGTGGCTGTGTTTGTGGACAATACCAGCAGTGAGGTCTTGGATGAACTGTACCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
||
| CDS CAA 90 bp | TCCTTCGTGGCCTGGTACAGTTCATCCAAGACCTCACTGCTGGTATaGTCCACAAACACAGCCACCATGGCCTTGGAAGCCATCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFVAWYSSSKTSLLV*STNTATMALEAILL Trigger: CAGCAAGATGGCTTCCAAGGCCATGGTGGCTGTGTTTGTGGACAATACCAGCAGTGAGGTCTTGGATGAACTGTACCAGGCCACGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077788.7 |
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