Pregenerated sensors for TNFAIP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062210Ensembl transcript IDs: ENSMUST00000126666.3, ENSMUST00000128377.2, ENSMUST00000134348.8, ENSMUST00000145726.2, ENSMUST00000148159.3, ENSMUST00000148989.3, ENSMUST00000153873.3, ENSMUST00000179937.2, ENSMUST00000180305.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAACGATAACCCTAAGGAGGACTCTGGCATACAAAACTAAGGGGTaGTACCACTGTCCGCATCATGTGCATAGTGTTGCTACCTACAGG | + |
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Preference number: 1 (lower is better) Translates to: ATITLRRTLAYKTKG*YHCPHHVHSVATYR Trigger: CCTGTAGGTAGCAACACTATGCACATGATGCGGACAGTGGTAGCACCCCTTAGTTTTGTATGCCAGAGTCCTCCTTAGGGTTATCGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 90 bp | GAAGTGCCAGCGCTTGGGGCCACACTCATCTGTCTTTGTATCCCTTaGCATCTGAATGACCAACTATCCGTTTTTCTCACATCTTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: EVPALGATLICLCIP*HLNDQLSVFLTSCQ Trigger: TTGGCAAGATGTGAGAAAAACGGATAGTTGGTCATTCAGATGTCAAGGGATACAAAGACAGATGAGTGTGGCCCCAAGCGCTGGCACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR GCA 90 bp | AATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTaGCAGCGCTTGGGGCCACACTCATCTGTCTTTGTATCCCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: NIQRATNMISLKHKK*QRLGPHSSVFVSLD Trigger: GTCAAGGGATACAAAGACAGATGAGTGTGGCCCCAAGCGCTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 90 bp | TCAGTTTACACAAGCTACAGTCATCAGAGATTAGGGCGCCTCAATTaGGAAAATGTCTCCATAAGATCGGGCTGTAGGCATGCCTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SVYTSYSHQRLGRLN*ENVSIRSGCRHACR Trigger: CCTACAGGCATGCCTACAGCCCGATCTTATGGAGACATTTTCTCAATTGAGGCGCCCTAATCTCTGATGACTGTAGCTTGTGTAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR GCA 90 bp | GTGCATAGTGTTGCTACCTACAGGTCCATCAGTATGACTCAAATGTaGGGACGTCTCTCAATTTCTCCCAAGGTCTTCAGTTTTGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: VHSVATYRSISMTQM*GRLSISPKVFSFVG Trigger: ACCGACAAAACTGAAGACCTTGGGAGAAATTGAGAGACGTCCGCACATTTGAGTCATACTGATGGACCTGTAGGTAGCAACACTATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CCA 90 bp | GCAAGGGTCTACTTCATTATCCACACACCAAAAATTATACAGAAATaGCACACCAAGCACCGAAGACAGACACGGTCATCAGTCTACTCG | + |
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Preference number: 1 (lower is better) Translates to: ARVYFIIHTPKIIQK*HTKHRRQTRSSVYS Trigger: CGAGTAGACTGATGACCGTGTCTGTCTTCGGTGCTTGGTGTGCCATTTCTGTATAATTTTTGGTGTGTGGATAATGAAGTAGACCCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 90 bp | ATCTTTGCTGGTAGATTTTCAGTCAATGTTCTTGAGGTAGGTAAATaGCAGGTTTGGTGGCAATTCCAATGTTTAGGGCCAGTGGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: IFAGRFSVNVLEVGK*QVWWQFQCLGPVVG Trigger: CCCAACCACTGGCCCTAAACATTGGAATTGCCACCAAACCTGTCATTTACCTACCTCAAGAACATTGACTGAAAATCTACCAGCAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 90 bp | TTTGCTTTCCTGAGCATTCGGTTTGACTGCCTCAAATTTAACTCCTaGAGGTCAATGACGATCTGTAACCAAAGAAGCAGAGTTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: FAFLSIRFDCLKFNS*RSMTICNQRSRVVS Trigger: TGAAACAACTCTGCTTCTTTGGTTACAGATCGTCATTGACCTTCAGGAGTTAAATTTGAGGCAGTCAAACCGAATGCTCAGGAAAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 90 bp | GAGGCTCCCGGAGGGAAGAATTATACTTTCCAGCTCAAATCAATATaGCATCACACCTGCATAGGTAATTTTTGCCATTGCTGTTTATCT | + |
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Preference number: 1 (lower is better) Translates to: EAPGGKNYTFQLKSI*HHTCIGNFCHCCLS Trigger: AGATAAACAGCAATGGCAAAAATTACCTATGCAGGTGTGATGTCATATTGATTTGAGCTGGAAAGTATAATTCTTCCCTCCGGGAGCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 90 bp | CAATATGCCATTTTCTATAAGGGACATCTACCGATAAGCAGAGTTTaGCATCTACAGGGTGTTCTTGAACTAACTTTCCACATATTCTTT | + |
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Preference number: 1 (lower is better) Translates to: QYAIFYKGHLPISRV*HLQGVLELTFHIFF Trigger: AAAGAATATGTGGAAAGTTAGTTCAAGAACACCCTGTAGATGTCAAACTCTGCTTATCGGTAGATGTCCCTTATAGAAAATGGCATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGGGCCACTCCCTGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGTATCTGTGCTTTTGCTaGACAAGGACTGGTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: TGPLPGLVVLGSISKQAGYLCFC*TRTGRA Trigger: TGCTCTACCAGTCCTTGTGCAGCAAAAGCACAGATA...CCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCAGGGAGTGGCCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGCAAACCGTGGGGAGGGTCTCAGAGAAACCTaGCCACTTCCTTCTAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: WAGGPRFHKQAGWANRGEGLRET*PLPSKL Trigger: TAGCTTAGAAGGAAGTGGTCAGGTTTCTCTGAGACC...CTCCCCACGGTTTGCCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGCCACTCCCTGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGCTTGGTTTTTGGTCATaGTGTTTCATCACAGCAACG | + |
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Preference number: 2 (lower is better) Translates to: TGPLPGLVVLGSISKQAGLGFWS*CFITAT Trigger: CGTTGCTGTGATGAAACACCATGACCAAAAACCAAG...CCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCAGGGAGTGGCCCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAGGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATCTAAAACACAAGAAGTaGCAGCGCTTGGGGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LKGRSQLQKHTLAMDTAHLKHKK*QRLGPH Trigger: GTGTGGCCCCAAGCGCTGGCACTTCTTGTGTTTTAG...ATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACCTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR-3UTR TCA 90 bp | CAATCCCTGTTACACACTGAAATACATGCATCTTTCTTATGTTACTTAGCAACGGCTGTTTATCTTTACTaGGAAAGCTGGGTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QSLLHTEIHASFLCYLATAVYLY*ESWVSE Trigger: CTCTGAGACCCAGCTTTCTCAGTAAAGATAAACAGC...CGTTGCTAAGTAACATAAGAAAGATGCATGTATTTCAGTGTGTAACAGGGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGCCCTAAGCAGATATTTCAAGGCAATATCATGCCACTAGCTCTGAGACTCAAAATTATACAGAAATaGCACACCAAGCACCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LCPKQIFQGNIMPLALRLKIIQK*HTKHRR Trigger: TCTTCGGTGCTTGGTGTGCCATTTCTGTATAATTTT...GAGTCTCAGAGCTAGTGGCATGATATTGCCTTGAAATATCTGCTTAGGGCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CCA 72 bp | ACCGTGGGGAGCAAGCCAGTAAGCATCACCCCTCTGTaGCCTGTGCATCAGCTCCTGCCTCTAGGTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TVGSKPVSITPL*PVHQLLPLGSW Trigger: CCAGGAACCTAGAGGCAGGAGCTGATGCACAGGCCACAGAGGGGTGATGCTTACTGGCTTGCTCCCCACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CCA 72 bp | TGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTaGGCAAACCGTGGGGAGCAAGCCAGTAAGCATCAC | + |
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Preference number: 3 (lower is better) Translates to: WAGGPRFHKQAG*ANRGEQASKHH Trigger: GTGATGCTTACTGGCTTGCTCCCCACGGTTTGCCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAGCAGGCTGGGCAAACCGTGGGGAGCAAGCCAGTAAGCATCACCCCTCTAGGTTCCTGGACTGTTaGAGTTGCTACCCTTACTGC | + |
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Preference number: 3 (lower is better) Translates to: KQAGWANRGEQASKHHPSRFLDC*SCYPYC Trigger: GCAGTAAGGGTAGCAACTCAAACAGTCCAGGAACCT...AGAGGGGTGATGCTTACTGGCTTGCTCCCCACGGTTTGCCCAGCCTGCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR-3UTR CAA 90 bp | ACGGGGCCACTCCCTGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGTCTTCAACTTGGTTTTaGGTCATGGTGTTTCATCAC | + |
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Preference number: 3 (lower is better) Translates to: TGPLPGLVVLGSISKQAGSSTWF*VMVFHH Trigger: GTGATGAAACACCATGACCAAAAACCAAGTTGAAGA...CCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCAGGGAGTGGCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | CTGTGCTTTTGCTGCACAAGGACTGGTAGAGCAGAGTaGGTCAGACCAGTGGCTCCCATGAGAGCACACTCT | + |
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Preference number: 3 (lower is better) Translates to: LCFCCTRTGRAE*VRPVAPMRAHS Trigger: AGAGTGTGCTCTCATGGGAGCCACTGGTCTGACTCACTCTGCTCTACCAGTCCTTGTGCAGCAAAAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR GCA 72 bp | CGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTaGCAGCGCTTGGGGCCACACTCATCTGTCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: RATNMISLKHKK*QRLGPHSSVFV Trigger: TACAAAGACAGATGAGTGTGGCCCCAAGCGCTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR GCA 72 bp | ACCCTAAGGAGGACTCTGGCATACAAAACTAAGGGGTaGTACCACTGTCCGCATCATGTGCATAGTGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TLRRTLAYKTKG*YHCPHHVHSVA Trigger: AGCAACACTATGCACATGATGCGGACAGTGGTAGCACCCCTTAGTTTTGTATGCCAGAGTCCTCCTTAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | GCGCTTGGGGCCACACTCATCTGTCTTTGTATCCCTTaGCATCTGAATGACCAACTATCCGTTTTTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: ALGATLICLCIP*HLNDQLSVFLT Trigger: TGTGAGAAAAACGGATAGTTGGTCATTCAGATGTCAAGGGATACAAAGACAGATGAGTGTGGCCCCAAGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR GCA 72 bp | GTTGCTACCTACAGGTCCATCAGTATGACTCAAATGTaGGGACGTCTCTCAATTTCTCCCAAGGTCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: VATYRSISMTQM*GRLSISPKVFS Trigger: ACTGAAGACCTTGGGAGAAATTGAGAGACGTCCGCACATTTGAGTCATACTGATGGACCTGTAGGTAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | GGGCCACACTCATCTGTCTTTGTATCCCTTGACATCTaGATGACCAACTATCCGTTTTTCTCACATCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GPHSSVFVSLDI*MTNYPFFSHLA Trigger: GGCAAGATGTGAGAAAAACGGATAGTTGGTCATTCAGATGTCAAGGGATACAAAGACAGATGAGTGTGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 72 bp | ACAAGCTACAGTCATCAGAGATTAGGGCGCCTCAATTaGGAAAATGTCTCCATAAGATCGGGCTGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TSYSHQRLGRLN*ENVSIRSGCRH Trigger: ATGCCTACAGCCCGATCTTATGGAGACATTTTCTCAATTGAGGCGCCCTAATCTCTGATGACTGTAGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CCA 72 bp | AAGAGACCCTTCCCTCTTCAACTTGGTTTTTGGTCATaGTGTTTCATCACAGCAACGATAACCCTAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KRPFPLQLGFWS*CFITATITLRR Trigger: CCTCCTTAGGGTTATCGTTGCTGTGATGAAACACCATGACCAAAAACCAAGTTGAAGAGGGAAGGGTCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | AGGTCATATGGGGGCCAAGCCTTTCTGAAATACATGTaGTTGATAAAAGAGTCTCCGTCTTCCCTTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: RSYGGQAFLKYM*LIKESPSSLYK Trigger: CTTGTAAAGGGAAGACGGAGACTCTTTTATCAATCACATGTATTTCAGAAAGGCTTGGCCCCCATATGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| 3UTR TCA 72 bp | CTGAGCATTCGGTTTGACTGCCTCAAATTTAACTCCTaGAGGTCAATGACGATCTGTAACCAAAGAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LSIRFDCLKFNS*RSMTICNQRSR Trigger: TCTGCTTCTTTGGTTACAGATCGTCATTGACCTTCAGGAGTTAAATTTGAGGCAGTCAAACCGAATGCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR-3UTR CAA 90 bp | TTATGCCCTAAGCAGATATTTCAAGGCAATATCATGCCACTAGCTCTGAGACTCTTCAAAAACACACTCTaGCAATGGACACTGCTCATG | + |
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Preference number: 3 (lower is better) Translates to: LCPKQIFQGNIMPLALRLFKNTL*QWTLLM Trigger: CATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAA...GAGTCTCAGAGCTAGTGGCATGATATTGCCTTGAAATATCTGCTTAGGGCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | CACACTCATCTGTCTTTGTATCCCTTGACATCTGAATaGCCAACTATCCGTTTTTCTCACATCTTGCCAATC | + |
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Preference number: 3 (lower is better) Translates to: HTHLSLYPLTSE*PTIRFSHILPI Trigger: GATTGGCAAGATGTGAGAAAAACGGATAGTTGGTCATTCAGATGTCAAGGGATACAAAGACAGATGAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 72 bp | GTAACCAAAGAAGCAGAGTTGTTTCAAAAGGATCAATaGCAGCAAAGAGAGGCTCTCGACATTGTAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VTKEAELFQKDQ*QQREALDIVRE Trigger: CTCTCTTACAATGTCGAGAGCCTCTCTTTGCTGTCATTGATCCTTTTGAAACAACTCTGCTTCTTTGGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 72 bp | GCTTCAAAAACACACTCTTGCAATGGACACTGCTCATaGTGTCTAAGATTGTTCACTCCCACAGTCATGATT | + |
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Preference number: 3 (lower is better) Translates to: ASKTHSCNGHCS*CLRLFTPTVMI Trigger: AATCATGACTGTGGGAGTGAACAATCTTAGACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 72 bp | GGTAGATTTTCAGTCAATGTTCTTGAGGTAGGTAAATaGCAGGTTTGGTGGCAATTCCAATGTTTAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GRFSVNVLEVGK*QVWWQFQCLGP Trigger: TGGCCCTAAACATTGGAATTGCCACCAAACCTGTCATTTACCTACCTCAAGAACATTGACTGAAAATCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CCA 72 bp | TACTTCATTATCCACACACCAAAAATTATACAGAAATaGCACACCAAGCACCGAAGACAGACACGGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: YFIIHTPKIIQK*HTKHRRQTRSS Trigger: TGATGACCGTGTCTGTCTTCGGTGCTTGGTGTGCCATTTCTGTATAATTTTTGGTGTGTGGATAATGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | GGTTTGACTGCCTCAAATTTAACTCCTGAAGGTCAATaGCGATCTGTAACCAAAGAAGCAGAGTTGTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: GLTASNLTPEGQ*RSVTKEAELFQ Trigger: TTGAAACAACTCTGCTTCTTTGGTTACAGATCGTCATTGACCTTCAGGAGTTAAATTTGAGGCAGTCAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR TCA 72 bp | GGAGGGAAGAATTATACTTTCCAGCTCAAATCAATATaGCATCACACCTGCATAGGTAATTTTTGCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: GGKNYTFQLKSI*HHTCIGNFCHC Trigger: GCAATGGCAAAAATTACCTATGCAGGTGTGATGTCATATTGATTTGAGCTGGAAAGTATAATTCTTCCCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | ATTTTCTATAAGGGACATCTACCGATAAGCAGAGTTTaGCATCTACAGGGTGTTCTTGAACTAACTTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: IFYKGHLPISRV*HLQGVLELTFH Trigger: GTGGAAAGTTAGTTCAAGAACACCCTGTAGATGTCAAACTCTGCTTATCGGTAGATGTCCCTTATAGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR TCA 72 bp | ATGTTAATACGGGAACATGTCAGTACATGTTCAAGATaGCATCAAAGTTATGCCCTAAGCAGATATTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: MLIREHVSTCSR*HQSYALSRYFK Trigger: CTTGAAATATCTGCTTAGGGCATAACTTTGATGTCATCTTGAACATGTACTGACATGTTCCCGTATTAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR TCA 90 bp | ACGGGGCCACTCCCTGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGCCAGCTCGTCTTGATTaGACTGATTGTTCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TGPLPGLVVLGSISKQAGPARLD*TDCSCG Trigger: TCCACAGGAACAATCAGTTCAATCAAGACGAGCTGG...CCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCAGGGAGTGGCCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | AAGCAAGCAGGCTGGGCAAACCGTGGGGAGCAAGCCAGTAAGCATCACCCCTCTCGTCGATCAGCGTGGTaGCGATGGATTTGGATACCA | + |
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Preference number: 4 (lower is better) Translates to: KQAGWANRGEQASKHHPSRRSAW*RWIWIP Trigger: TGGTATCCAAATCCATCGCCACCACGCTGATCGACG...AGAGGGGTGATGCTTACTGGCTTGCTCCCCACGGTTTGCCCAGCCTGCTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGCAAACCGTGGGGAGTGGTGGCGATGGATTTaGATACCATTTTGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WAGGPRFHKQAGWANRGEWWRWI*IPFCPG Trigger: TCCTGGGCAAAATGGTATCCAAATCCATCGCCACCA...CTCCCCACGGTTTGCCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR TCA 90 bp | ATTTCACAATTAGTGATTCAGACCATTGTGGACGGGGCCACTCCCTGGGCTGGTCGATCTGGTGGAAGCTaGCGACCGTCATGGCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ISQLVIQTIVDGATPWAGRSGGS*RPSWQA Trigger: AGCTTGCCATGACGGTCGTCAGCTTCCACCAGATCG...ACCAGCCCAGGGAGTGGCCCCGTCCACAATGGTCTGAATCACTAATTGTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR GCA 90 bp | AAGCAAGCAGGCTGGGCAAACCGTGGGGAGCAAGCCAGTAAGCATCACCCCTCTCAGGATCTTCTTTTGTaGCTGAACGGCCAGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: KQAGWANRGEQASKHHPSQDLLL*LNGQVF Trigger: AAAAACCTGGCCGTTCAGGCACAAAAGAAGATCCTG...AGAGGGGTGATGCTTACTGGCTTGCTCCCCACGGTTTGCCCAGCCTGCTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCAGGCTGGGCAAACCGTGGGGAGCAAGCCAGTAAGCATCACCCCTCTCTCAAATTTAACTCCTaGAGGTCAATGACGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: KQAGWANRGEQASKHHPSLKFNS*RSMTIW Trigger: CCAGATCGTCATTGACCTTCAGGAGTTAAATTTGAG...AGAGGGGTGATGCTTACTGGCTTGCTCCCCACGGTTTGCCCAGCCTGCTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | GGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCGCCTCCTTCTTGTTCTaGGTGTACTCCTTGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GRSQLQKHTLAMDTAHDVASFLF*VYSLVT Trigger: GGTGACCAAGGAGTACACCCAGAACAAGAAGGAGGC...GACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | AGAAATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTGCCAGACTCGTTCAGCAGCCTaGACAGCACATTGCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RNIQRATNMISLKHKKCQTRSAA*TAHCGR Trigger: TCGACCGCAATGTGCTGTCCAGGCTGCTGAACGAGT...CTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAACTACCTGGTGGAAGCTaGCGACCGTCATGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQLPGGS*RPSWQA Trigger: AGCTTGCCATGACGGTCGTCAGCTTCCACCAGGTAG...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTGCCAATCATTAAGACGTTTGCAGCCAGAATTTTTGGCAATACACTTTTTCCGCTTCGGAGAGCATaGTGTCGGGGTGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPIIKTFAARIFGNTLFPLRRA*CRGAQP Trigger: TGGCTGTGCACCCCGACAGCATGCTCTCCGAAGCGG...AAAAAGTGTATTGCCAAAAATTCTGGCTGCAAACGTCTTAATGATTGGCAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAAATTATACAGAAATGGCACACCAAGCACCGAAGACAGACACGGTCATCTGTCGTCGATCAGCGTaGTGGCGATGGATTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TKNYTEMAHQAPKTDTVICRRSA*WRWIWI Trigger: TATCCAAATCCATCGCCACCACGCTGATCGACGACA...GATGACCGTGTCTGTCTTCGGTGCTTGGTGTGCCATTTCTGTATAATTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | AGAAATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTGCCAGGCCTCCTTCTTGTTCTaGGTGTACTCCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RNIQRATNMISLKHKKCQASFLF*VYSLVT Trigger: GGTGACCAAGGAGTACACCCAGAACAAGAAGGAGGC...CTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS-3UTR CCA 90 bp | AGAAATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTGCCAGAAGGTGTACTCTACCTaGTGGAAGCTGACGACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNIQRATNMISLKHKKCQKVYST*WKLTTV Trigger: GACGGTCGTCAGCTTCCACCAGGTAGAGTACACCTT...CTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS-3UTR CCA 90 bp | TTATGCCCTAAGCAGATATTTCAAGGCAATATCATGCCACTAGCTCTGAGACTCTGTCGTCGATCAGCGTaGTGGCGATGGATTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LCPKQIFQGNIMPLALRLCRRSA*WRWIWI Trigger: TATCCAAATCCATCGCCACCACGCTGATCGACGACA...GAGTCTCAGAGCTAGTGGCATGATATTGCCTTGAAATATCTGCTTAGGGCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGACTCGTTCAGCAGCCTaGACAGCACATTGCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGTRSAA*TAHCGR Trigger: TCGACCGCAATGTGCTGTCCAGGCTGCTGAACGAGT...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCCAATCATTAAGACGTTTGCAGCCAGAATTTTTGGCAATACACTTTTTCTACCTGGTGGAAGCTaGCGACCGTCATGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPIIKTFAARIFGNTLFLPGGS*RPSWQA Trigger: AGCTTGCCATGACGGTCGTCAGCTTCCACCAGGTAG...AAAAAGTGTATTGCCAAAAATTCTGGCTGCAAACGTCTTAATGATTGGCAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATTATTAACCCGTCCGTaGGACTTGGCGGTAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQLLTRP*DLAVRW Trigger: CCACCTTACCGCCAAGTCTCACGGACGGGTTAATAA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CCA 90 bp | TTATGCCCTAAGCAGATATTTCAAGGCAATATCATGCCACTAGCTCTGAGACTCTGGTGGCGATGGATTTaGATACCATTTTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCPKQIFQGNIMPLALRLWWRWI*IPFCPG Trigger: TCCTGGGCAAAATGGTATCCAAATCCATCGCCACCA...GAGTCTCAGAGCTAGTGGCATGATATTGCCTTGAAATATCTGCTTAGGGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAACGTCGATCAGCGTGGTaGCGATGGATTTGGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQRRSAW*RWIWIP Trigger: TGGTATCCAAATCCATCGCCACCACGCTGATCGACG...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGCCTCCTTCTTGTTCTaGGTGTACTCCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGASFLF*VYSLVT Trigger: GGTGACCAAGGAGTACACCCAGAACAAGAAGGAGGC...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGAAGGTGTACTCTACCTaGTGGAAGCTGACGACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGKVYST*WKLTTV Trigger: GACGGTCGTCAGCTTCCACCAGGTAGAGTACACCTT...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR TCA 90 bp | GTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCTATCTTCTTTTGTGCCTaGACGGCCAGGTTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VEVSFKNTLLQWTLLMMSIFFCA*TARFLE Trigger: TTCCAAAAACCTGGCCGTTCAGGCACAAAAGAAGAT...AGACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR TCA 90 bp | CAATCCCTGTTACACACTGAAATACATGCATCTTTCTTATGTTACTTAGCAACGTTATTAACCCGTCCGTaGGACTTGGCGGTAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLLHTEIHASFLCYLATLLTRP*DLAVRW Trigger: CCACCTTACCGCCAAGTCTCACGGACGGGTTAATAA...CGTTGCTAAGTAACATAAGAAAGATGCATGTATTTCAGTGTGTAACAGGGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGTCATGGCAAGCTGGTaGACCTTCTTCTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRSQLQKHTLAMDTAHVMASW*TFFLNF Trigger: GAAGTTCAAGAAGAAGGTGCACCAGCTTGCCATGAC...ATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACCTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATGTCGTCGATCAGCGTaGTGGCGATGGATTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQCRRSA*WRWIWI Trigger: TATCCAAATCCATCGCCACCACGCTGATCGACGACA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| 3UTR CAA 72 bp | AAGCACCGAAGACAGACACGGTCATCAGTCTACTCGTaGAAAAACCAAATAACACAATCTAAATCCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KHRRQTRSSVYS*KNQITQSKSRV Trigger: GACTCGGGATTTAGATTGTGTTATTTGGTTTTTCAACGAGTAGACTGATGACCGTGTCTGTCTTCGGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| 3UTR CAA 72 bp | AGAACTGTAAGAAGAAGAGACCCTTCCCTCTTCAACTaGGTTTTTGGTCATGGTGTTTCATCACAGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: RTVRRRDPSLFN*VFGHGVSSQQR Trigger: TCGTTGCTGTGATGAAACACCATGACCAAAAACCAAGTTGAAGAGGGAAGGGTCTCTTCTTCTTACAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
||
| CDS-3UTR TCA 90 bp | ATGACGATCTGTAACCAAAGAAGCAGAGTTGTTTCAAAAGGATCAATGACAGCACCAGCTCGTCTTGATTaGACTGATTGTTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTICNQRSRVVSKGSMTAPARLD*TDCSCG Trigger: TCCACAGGAACAATCAGTTCAATCAAGACGAGCTGG...TGCTGTCATTGATCCTTTTGAAACAACTCTGCTTCTTTGGTTACAGATCGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAACCAGCTCGTCTTGATTaGACTGATTGTTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQPARLD*TDCSCG Trigger: TCCACAGGAACAATCAGTTCAATCAAGACGAGCTGG...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAAGTCATGGCAAGCTGGTaGACCTTCTTCTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQVMASW*TFFLNF Trigger: GAAGTTCAAGAAGAAGGTGCACCAGCTTGCCATGAC...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATGGTGGCGATGGATTTaGATACCATTTTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQWWRWI*IPFCPG Trigger: TCCTGGGCAAAATGGTATCCAAATCCATCGCCACCA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGTCAGCGTGGTGGCGATaGATTTGGATACCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGSAWWR*IWIPFC Trigger: GCAAAATGGTATCCAAATCCATCGCCACCACGCTGA...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAAATCTTCTTTTGTGCCTaGACGGCCAGGTTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQIFFCA*TARFLE Trigger: TTCCAAAAACCTGGCCGTTCAGGCACAAAAGAAGAT...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR TCA 90 bp | GTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCTCATCTAACATTTTGTTaGTGCCGTCGCAAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEVSFKNTLLQWTLLMMSHLTFC*CRRKVS Trigger: AGAAACTTTGCGACGGCATCAACAAAATGTTAGATG...AGACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR GCA 90 bp | ATGACGATCTGTAACCAAAGAAGCAGAGTTGTTTCAAAAGGATCAATGACAGCACAGGATCTTCTTTTGTaGCTGAACGGCCAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTICNQRSRVVSKGSMTAQDLLL*LNGQVF Trigger: AAAAACCTGGCCGTTCAGGCACAAAAGAAGATCCTG...TGCTGTCATTGATCCTTTTGAAACAACTCTGCTTCTTTGGTTACAGATCGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR GCA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAACAGGATCTTCTTTTGTaGCTGAACGGCCAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQQDLLL*LNGQVF Trigger: AAAAACCTGGCCGTTCAGGCACAAAAGAAGATCCTG...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCTAAGATTGTTCACTCCCACAGTCATGATTTCAGATGCACAGTTTTTTCAGCGTGGTGGCGATaGATTTGGATACCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MMSKIVHSHSHDFRCTVFSAWWR*IWIPFC Trigger: GCAAAATGGTATCCAAATCCATCGCCACCACGCTGA...AAAAACTGTGCATCTGAAATCATGACTGTGGGAGTGAACAATCTTAGACATCAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| 3UTR CAA 72 bp | CTTCTAAGCTATGATGGGTCAAAGCGGATCTTAACTTaGAGAATTTTCACTTGTGGGATCTTTGCTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYDGSKRILT*RIFTCGIFAGR Trigger: TCTACCAGCAAAGATCCCACAAGTGAAAATTCTCAAAGTTAAGATCCGCTTTGACCCATCATAGCTTAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS-3UTR TCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGCATCTAACATTTTGTTaGTGCCGTCGCAAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGHLTFC*CRRKVS Trigger: AGAAACTTTGCGACGGCATCAACAAAATGTTAGATG...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR GCA 90 bp | CTAAAAGGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATATTTGGATACCATTTTaGCCAGGATCTTCTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRSQLQKHTLAMDTAHIWIPF*PGSSFV Trigger: CACAAAAGAAGATCCTGGGCAAAATGGTATCCAAAT...ATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACCTTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR GCA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGATTTGGATACCATTTTaGCCAGGATCTTCTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGIWIPF*PGSSFV Trigger: CACAAAAGAAGATCCTGGGCAAAATGGTATCCAAAT...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CAA 90 bp | ACGGGGCCACTCCCTGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGTGGAGGACGGCCAGCTaGATGACCGTCTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGPLPGLVVLGSISKQAGWRTAS*MTVLMR Trigger: CCTCATCAAGACGGTCATCAAGCTGGCCGTCCTCCA...CCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCAGGGAGTGGCCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGTGGTCCTAGGTTCCATAAGCAAGCAGGCTGGGCAAACCGTGGGGAGTGGTGCACCTTCTTCTaGAACTTCTCCATGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WAGGPRFHKQAGWANRGEWCTFF*NFSMSA Trigger: GGCGCTCATGGAGAAGTTCAAGAAGAAGGTGCACCA...CTCCCCACGGTTTGCCCAGCCTGCTTGCTTATGGAACCTAGGACCACCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
||
| CDS TCA 90 bp | CTGAGCTTATGCAACTTCCCAGCGCTGATAGCCGGCGCACATCTGTaGTTGATTACTGTGAAGCGTTCAGAAGCCAGGGGCTCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLCNFPALIAGAHL*LITVKRSEARGSAW Trigger: CCAGGCAGAGCCCCTGGCTTCTGAACGCTTCACAGTAATCAATCACAGATGTGCGCCGGCTATCAGCGCTGGGAAGTTGCATAAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180305.2 |
||
| CDS TCA 90 bp | TGCCTGAACGGCCAGGTTTTTGGAATTGAAGACATCTGTAGCCACTaGTGTGACTTCCCCATGAGAGGTACAAGCTCGGCTCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLNGQVFGIEDICSH*CDFPMRGTSSALEA Trigger: AGCTTCCAGAGCCGAGCTTGTACCTCTCATGGGGAAGTCACATCAGTGGCTACAGATGTCTTCAATTCCAAAAACCTGGCCGTTCAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126666.3 |
||
| CDS TCA 90 bp | TTTGCTTTCCTGAGCATTCGGTTTGACTGCCTCAAATTTAACTCCTaGAGGTCAATGACGATCTGGTGGAAGCTGACGACCGTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FAFLSIRFDCLKFNS*RSMTIWWKLTTVMA Trigger: TGCCATGACGGTCGTCAGCTTCCACCAGATCGTCATTGACCTTCAGGAGTTAAATTTGAGGCAGTCAAACCGAATGCTCAGGAAAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCTTCTGGGTGTACTCCTaGGTCACCCTGTACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSQLQKHTLAMDTAHDVFWVYS*VTLYSS Trigger: TGAGCTGTACAGGGTGACCAAGGAGTACACCCAGAA...GACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATGGAGGACGGCCAGCTaGATGACCGTCTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQWRTAS*MTVLMR Trigger: CCTCATCAAGACGGTCATCAAGCTGGCCGTCCTCCA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CAA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGTGGAGGACGGCCAGCTaGATGACCGTCTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGWRTAS*MTVLMR Trigger: CCTCATCAAGACGGTCATCAAGCTGGCCGTCCTCCA...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
||
| CDS-3UTR CAA 90 bp | AGAAATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTGCCAGTGGTGCACCTTCTTCTaGAACTTCTCCATGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNIQRATNMISLKHKKCQWCTFF*NFSMSA Trigger: GGCGCTCATGGAGAAGTTCAAGAAGAAGGTGCACCA...CTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
||
| CDS TCA 90 bp | TTTTTGGAATTGAAGACATCTGTAGCCACTGATGTGACTTCCCCATaGGAGGTACAAGCTCGGCTCTGGAAGCTCTTGGTTTCTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLELKTSVATDVTSP*EVQARLWKLLVSEV Trigger: TACTTCAGAAACCAAGAGCTTCCAGAGCCGAGCTTGTACCTCTCATGGGGAAGTCACATCAGTGGCTACAGATGTCTTCAATTCCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126666.3 |
||
| CDS-3UTR CAA 90 bp | CTAAAAGGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATTTCTGGGTGTACTCCTaGGTCACCCTGTACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKGRSQLQKHTLAMDTAHFWVYS*VTLYSS Trigger: TGAGCTGTACAGGGTGACCAAGGAGTACACCCAGAA...ATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACCTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCAGCTTGATGACCGTCTaGATGAGGTTCTTGATGACC | + |
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Preference number: 5 (lower is better) Translates to: GRSQLQKHTLAMDTAHDVSLMTV*MRFLMT Trigger: GGTCATCAAGAACCTCATCAAGACGGTCATCAAGCT...GACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR CAA 90 bp | ATGACGATCTGTAACCAAAGAAGCAGAGTTGTTTCAAAAGGATCAATGACAGCAGTGGTGGCGATGGATTaGGATACCATTTTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MTICNQRSRVVSKGSMTAVVAMD*DTILPR Trigger: CCTGGGCAAAATGGTATCCAAATCCATCGCCACCAC...TGCTGTCATTGATCCTTTTGAAACAACTCTGCTTCTTTGGTTACAGATCGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATTCTGGGTGTACTCCTaGGTCACCCTGTACAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQFWVYS*VTLYSS Trigger: TGAGCTGTACAGGGTGACCAAGGAGTACACCCAGAA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAATGGTGCACCTTCTTCTaGAACTTCTCCATGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQWCTFF*NFSMSA Trigger: GGCGCTCATGGAGAAGTTCAAGAAGAAGGTGCACCA...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CAA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGAGCTTGATGACCGTCTaGATGAGGTTCTTGATGACC | + |
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Preference number: 5 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGSLMTV*MRFLMT Trigger: GGTCATCAAGAACCTCATCAAGACGGTCATCAAGCT...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CAA 90 bp | GTAGAAGTCAGCTTCAAAAACACACTCTTGCAATGGACACTGCTCATGATGTCTGATTTGGATACCATTTaGCCCAGGATCTTCTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VEVSFKNTLLQWTLLMMSDLDTI*PRIFFC Trigger: ACAAAAGAAGATCCTGGGCAAAATGGTATCCAAATC...AGACATCATGAGCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS-3UTR CAA 90 bp | AGAAATATCCAACGTGCCACCAACATGATTTCCCTAAAACACAAGAAGTGCCAGTCTTCATCTAACATTTaGTTGATGCCGTCGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: RNIQRATNMISLKHKKCQSSSNI*LMPSQS Trigger: ACTTTGCGACGGCATCAACAAAATGTTAGATGAAGA...CTGGCACTTCTTGTGTTTTAGGGAAATCATGTTGGTGGCACGTTGGATATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR CAA 90 bp | ATGATGTCTAAGATTGTTCACTCCCACAGTCATGATTTCAGATGCACAGTTTTTGCCAGGTTTTTGGAATaGAAGACATCTGTAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: MMSKIVHSHSHDFRCTVFARFLE*KTSVAT Trigger: AGTGGCTACAGATGTCTTCAATTCCAAAAACCTGGC...AAAAACTGTGCATCTGAAATCATGACTGTGGGAGTGAACAATCTTAGACATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR CAA 90 bp | ATCTTGCCAATCATTAAGACGTTTGCAGCCAGAATTTTTGGCAATACACTTTTTAGCTTGATGACCGTCTaGATGAGGTTCTTGATGACC | + |
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Preference number: 5 (lower is better) Translates to: ILPIIKTFAARIFGNTLFSLMTV*MRFLMT Trigger: GGTCATCAAGAACCTCATCAAGACGGTCATCAAGCT...AAAAAGTGTATTGCCAAAAATTCTGGCTGCAAACGTCTTAATGATTGGCAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148159.3 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGGGCCAAGATTTGGATACCATTTaGCCCAGGATCTTCTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: TEVLLLMSNNNNRSYGGQDLDTI*PRIFFC Trigger: ACAAAAGAAGATCCTGGGCAAAATGGTATCCAAATC...TTGGCCCCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CAA 90 bp | AGCCACACAGAAGTACTACTATTAATGTCCAACAACAATAACAGGTCATATGGGTCTTCATCTAACATTTaGTTGATGCCGTCGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SHTEVLLLMSNNNNRSYGSSSNI*LMPSQS Trigger: ACTTTGCGACGGCATCAACAAAATGTTAGATGAAGA...CCCATATGACCTGTTATTGTTGTTGGACATTAATAGTAGTACTTCTGTGTGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000148989.3 |
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| CDS-3UTR CAA 90 bp | CAATCCCTGTTACACACTGAAATACATGCATCTTTCTTATGTTACTTAGCAACGGATTTGGATACCATTTaGCCCAGGATCTTCTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: QSLLHTEIHASFLCYLATDLDTI*PRIFFC Trigger: ACAAAAGAAGATCCTGGGCAAAATGGTATCCAAATC...CGTTGCTAAGTAACATAAGAAAGATGCATGTATTTCAGTGTGTAACAGGGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148159.3 ENSMUST00000179937.2 |
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| CDS CAA 72 bp | AGGACGGCCAGCTTGATGACCGTCTTGATGAGGTTCTaGATGACCCTCTCCGCCTCCTTCTTGTTCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTASLMTVLMRF*MTLSASFLFWV Trigger: CACCCAGAACAAGAAGGAGGCGGAGAGGGTCATCAAGAACCTCATCAAGACGGTCATCAAGCTGGCCGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126666.3 ENSMUST00000128377.2 ENSMUST00000148159.3 ENSMUST00000148989.3 ENSMUST00000153873.3 ENSMUST00000179937.2 |
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| CDS CAA 72 bp | TTGTTCCTGTGGAGGACGGCCAGCTTGATGACCGTCTaGATGAGGTTCTTGATGACCCTCTCCGCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFLWRTASLMTV*MRFLMTLSASF Trigger: GAAGGAGGCGGAGAGGGTCATCAAGAACCTCATCAAGACGGTCATCAAGCTGGCCGTCCTCCACAGGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000126666.3 ENSMUST00000128377.2 ENSMUST00000148159.3 ENSMUST00000148989.3 ENSMUST00000153873.3 ENSMUST00000179937.2 |
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| CDS CAA 72 bp | CTTCTTCTTGAACTTCTCCATGAGCGCCAGCTCGTCTaGATTGAACTGATTGTTCCTGTGGAGGACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLELLHERQLV*IELIVPVEDGQ Trigger: CTGGCCGTCCTCCACAGGAACAATCAGTTCAATCAAGACGAGCTGGCGCTCATGGAGAAGTTCAAGAAGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000126666.3 ENSMUST00000128377.2 ENSMUST00000148159.3 ENSMUST00000148989.3 ENSMUST00000179937.2 |
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| CDS TCA 72 bp | CTGAGCATTCGGTTTGACTGCCTCAAATTTAACTCCTaGAGGTCAATGACGATCTGGTGGAAGCTGACGACC | + |
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Preference number: 6 (lower is better) Translates to: LSIRFDCLKFNS*RSMTIWWKLTT Trigger: GGTCGTCAGCTTCCACCAGATCGTCATTGACCTTCAGGAGTTAAATTTGAGGCAGTCAAACCGAATGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179937.2 |
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| CDS CAA 90 bp | CGTGGTGGCGATGGATTTGGATACCATTTTGCCCAGGATCTTCTTTaGTGCCTGAACGGCCAGGTTTTTGGAATTGAAGACATCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RGGDGFGYHFAQDLL*CLNGQVFGIEDICS Trigger: GCTACAGATGTCTTCAATTCCAAAAACCTGGCCGTTCAGGCACAAAAGAAGATCCTGGGCAAAATGGTATCCAAATCCATCGCCACCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000126666.3 ENSMUST00000128377.2 ENSMUST00000134348.8 ENSMUST00000148159.3 ENSMUST00000148989.3 ENSMUST00000153873.3 ENSMUST00000179937.2 |
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| CDS TCA 72 bp | AACATTTTGTTGATGCCGTCGCAAAGTTTCTGTAAGTaGGGTTTAAACTTTCCAAAGGGATTGTACAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NILLMPSQSFCK*GLNFPKGLYKA Trigger: TGCCTTGTACAATCCCTTTGGAAAGTTTAAACCTCACTTACAGAAACTTTGCGACGGCATCAACAAAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126666.3 ENSMUST00000145726.2 ENSMUST00000148159.3 ENSMUST00000148989.3 |
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