Pregenerated sensors for TNFAIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017615Ensembl transcript IDs: ENSMUST00000017759.9, ENSMUST00000108277.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCAAGGGCCAGGGGGTATTCTTGGCAGGAGGTGGGAAATCAGTaGACTCACCCTAGAGCAGAAGTAGCTCCTTATTGGCAGGAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: QPRARGYSWQEVGNQ*THPRAEVAPYWQEV Trigger: CACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCACTGATTTCCCACCTCCTGCCAAGAATACCCCCTGGCCCTTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 90 bp | CGCAGCACCAGAAGCCTCCTTTCCCCTAGAACAAAGCTGTTCTCGTaGGCCTCAGCTGAGGAGCTAAAGGAGCTCTTCAGAAGAAAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RSTRSLLSPRTKLFS*ASAEELKELFRRKG Trigger: CCCCTTTCTTCTGAAGAGCTCCTTTAGCTCCTCAGCTGAGGCCCACGAGAACAGCTTTGTTCTAGGGGAAAGGAGGCTTCTGGTGCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 90 bp | AGAGCCCAACCCTGGGCTTGGCATCTGCCCATAGGCTCTAAGAGGTaGGCCTTTGTGTGCCCATGTGGCAATCATAAGAGTAGTCAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: RAQPWAWHLPIGSKR*AFVCPCGNHKSSQG Trigger: CCCTTGACTACTCTTATGATTGCCACATGGGCACACAAAGGCTCACCTCTTAGAGCCTATGGGCAGATGCCAAGCCCAGGGTTGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 90 bp | AGGATGCTATTAAAACCATTTTCAACTTGGACGTCCTTTCCCTCTTaGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: RMLLKPFSTWTSFPS*YSLGSQADKPKLVS Trigger: ACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTGAAAATGGTTTTAATAGCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 90 bp | ATCAGTGTCAGAAAAAGCTTTGGGTCAAGGCAGAATAGATTCCCCTaGATGATAGACATACAAAGTGCTTTAAAGATGGGTCCTAGGATA | + |
|
Preference number: 1 (lower is better) Translates to: ISVRKSFGSRQNRFP*MIDIQSALKMGPRI Trigger: TATCCTAGGACCCATCTTTAAAGCACTTTGTATGTCTATCATTCAGGGGAATCTATTCTGCCTTGACCCAAAGCTTTTTCTGACACTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGGCCCAACCCTGGGCTTaGCATCTGCCCATAGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVAQPWA*HLPIGS Trigger: AGAGCCTATGGGCAGATGCCAAGCCCAGGGTTGGGC...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGATGACTAGACAGCACTaGACAGCAGAGGAGATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVMTRQH*TAEEMD Trigger: ATCCATCTCCTCTGCTGTTCAGTGCTGTCTAGTCAT...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCATTTCCCCTTGCCCTGTCAGGCTAGATCCTTGTGAGAGCCCAACCCTGCCAGCCAAGACAATGTaGCCTTCCCTCTCTCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FPISPCPVRLDPCESPTLPAKTM*PSLSQL Trigger: GAGCTGAGAGAGGGAAGGCCACATTGTCTTGGCTGG...CAGGGTTGGGCTCTCACAAGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCATTTCCCCTTGCCCTGTCAGGCTAGATCCTTGTGAGAGCCCAACCCTGTCTGAGTCAGTGATGTaGCCCTACCCTTTCCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: FPISPCPVRLDPCESPTLSESVM*PYPFPT Trigger: TGTGGGGAAAGGGTAGGGTCACATCACTGACTCAGA...CAGGGTTGGGCTCTCACAAGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCACACAGCTGGTGTTTGTaGGCAGCGTCCAGTCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: FFPARTCVTLQANQSHVPHSWCL*AASSLT Trigger: GGTCAGACTGGACGCTGCTCACAAACACCAGCTGTG...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCATTTCCCCTTGCCCTGTCAGGCTAGATCCTTGTGAGAGCCCAACCCTGGTACGTTCCACAGGGTaGCAGACAGGACTTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FPISPCPVRLDPCESPTLVRSTG*QTGLLV Trigger: CACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTAC...CAGGGTTGGGCTCTCACAAGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGATCTTGGTACATCCGTaGTCAGTGACCCAGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVILVHP*SVTQKK Trigger: TTTCTTCTGGGTCACTGACCACGGATGTACCAAGAT...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGGAGAAAACAGATTGGTaGCCTCATGCTGTCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVEKTDW*PHAVTF Trigger: GAATGTGACAGCATGAGGCCACCAATCTGTTTTCTC...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCGGCAGTACTGGAGATTaGGCCCAGGGCCTCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QLGRPFPLGILWVVRLTSGSTGD*AQGLTL Trigger: AAGAGTGAGGCCCTGGGCTCAATCTCCAGTACTGCC...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTACAAAGCTGTTCTCGTaGGCCTCAGCTGAGGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HVIPPRLLHSWDYRYGHATKLFS*ASAEEL Trigger: TAGCTCCTCAGCTGAGGCCCACGAGAACAGCTTTGT...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAATGACTAGACAGCACTaGACAGCAGAGGAGATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FFPARTCVTLQANQSHVPMTRQH*TAEEMD Trigger: ATCCATCTCCTCTGCTGTTCAGTGCTGTCTAGTCAT...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTAGGAGCAGCATAGGGTaGCCAATGGGTACGTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGILWVVRLTSQSWSVYFRSSIG*PMGTFH Trigger: GTGGAACGTACCCATTGGCCACCCTATGCTGCTCCT...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCGAAGTAGCTCCTTATTaGCAGGAAGTGGGGTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: QLGRPFPLGILWVVRLTSEVAPY*QEVGWH Trigger: ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTC...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCATTCTTGGCAGGAGGTaGGAAATCAGTGCACTCACC | + |
|
Preference number: 2 (lower is better) Translates to: QLGRPFPLGILWVVRLTSILGRR*EISALT Trigger: GGTGAGTGCACTGATTTCCCACCTCCTGCCAAGAAT...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CAA 90 bp | AGTCCCAACAAAGAAAGGGAGGGAAACCAAAGCGCAAAGGAAGAATaGACACCAGGTCTAGATCTTGGTACATCCGTGGTCAGTGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: SPNKEREGNQSAKEE*TPGLDLGTSVVSDP Trigger: TGGGTCACTGACCACGGATGTACCAAGATCTAGACCTGGTGTCAATTCTTCCTTTGCGCTTTGGTTTCCCTCCCTTTCTTTGTTGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTGTACGTTCCACAGGGTaGCAGACAGGACTTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGILWVVRLTSQSWSVYFVRSTG*QTGLLV Trigger: CACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTAC...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAACAAAGCTGTTCTCGTaGGCCTCAGCTGAGGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: NRLVASCCHIPKSVGKTETKLFS*ASAEEL Trigger: TAGCTCCTCAGCTGAGGCCCACGAGAACAGCTTTGT...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAACGTCCTTTCCCTCTTaGTATTCTTTGGGTAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FFPARTCVTLQANQSHVPTSFPS*YSLGSQ Trigger: CTGACTACCCAAAGAATACCAAGAGGGAAAGGACGT...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGCAATCATAAGAGTAGTCAAGGGATACAGCTGATAATCTGTGGCCCTTCTTCTGAGTCAGTGATGTaGCCCTACCCTTTCCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: CGNHKSSQGIQLIICGPSSESVM*PYPFPT Trigger: TGTGGGGAAAGGGTAGGGTCACATCACTGACTCAGA...AGAAGGGCCACAGATTATCAGCTGTATCCCTTGACTACTCTTATGATTGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAGAAGTAGCTCCTTATTaGCAGGAAGTGGGGTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: NRLVASCCHIPKSVGKTEEVAPY*QEVGWH Trigger: ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTC...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTAATTCTTGGCAGGAGGTaGGAAATCAGTGCACTCACC | + |
|
Preference number: 2 (lower is better) Translates to: DLGTSVVSDPEERSFKGLILGRR*EISALT Trigger: GGTGAGTGCACTGATTTCCCACCTCCTGCCAAGAAT...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAATCTGTGGCCCTTCTTaGGCACTGTTGATGGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: NRLVASCCHIPKSVGKTEICGPS*ALLMGT Trigger: TGTACCCATCAACAGTGCCCAAGAAGGGCCACAGAT...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTCTATGTAGCCCAGGCTaGCCTGGAACTTTTAACTAC | + |
|
Preference number: 2 (lower is better) Translates to: LGILWVVRLTSQSWSVYFLCSPG*PGTFNY Trigger: GTAGTTAAAAGTTCCAGGCCAGCCTGGGCTACATAG...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | TATCAGGGGCTGCAGCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATGAGACGTCCTTTCCCTCTTaGTATTCTTTGGGTAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YQGLQHICVLELNIPKYETSFPS*YSLGSQ Trigger: CTGACTACCCAAAGAATACCAAGAGGGAAAGGACGT...CTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGCTGCAGCCCCTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTAGAACATACCCAAGTATaGGGCTCACACCAAAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: DLGTSVVSDPEERSFKGLEHTQV*GSHQRI Trigger: GATTCTTTGGTGTGAGCCTCATACTTGGGTATGTTC...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTAAACCAGGACATAAACTaGGACATAGTATCAGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: DLGTSVVSDPEERSFKGLNQDIN*DIVSGA Trigger: AGCCCCTGATACTATGTCTCAGTTTATGTCCTGGTT...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGACCAGCCAAGACAATGTaGCCTTCCCTCTCTCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GKSHESRSLQYYFLKPRRPAKTM*PSLSQL Trigger: GAGCTGAGAGAGGGAAGGCCACATTGTCTTGGCTGG...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAGCCAGGGGGTATTCTTaGCAGGAGGTGGGAAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: GKSHESRSLQYYFLKPRRARGYS*QEVGNQ Trigger: CTGATTTCCCACCTCCTGCCAAGAATACCCCCTGGC...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CAA 90 bp | TTAAAACCATTTTCAACTTGGACGTCCTTTCCCTCTTGGTATTCTTaGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LKPFSTWTSFPSWYS*GSQADKPKLVSLLF Trigger: AAAAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTGAAAATGGTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAGGGGTCTGAGAATCTaGGTGTTAAAGGCTTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKSHESRSLQYYFLKPRRRGLRI*VLKASR Trigger: CCTAGAAGCCTTTAACACTCAGATTCTCAGACCCCT...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCTTAAGTCTGAGTCAGTaGTGTGACCCTACCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTSPDHFSIISLNQGEIFLSLSQ*CDPTLS Trigger: GGAAAGGGTAGGGTCACATCACTGACTCAGACTTAA...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAACCAGGACATAAACTaGGACATAGTATCAGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GKSHESRSLQYYFLKPRRNQDIN*DIVSGA Trigger: AGCCCCTGATACTATGTCTCAGTTTATGTCCTGGTT...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTTTTCCCATTTCCCCTTaGCCTGTCAGGCTAGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: SHESRSLQYYFLKPRRNFFPISP*PVRLDP Trigger: AGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA...AAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCCTATGTAGCCCAGGCTaGCCTGGAACTTTTAACTAC | + |
|
Preference number: 2 (lower is better) Translates to: LTSPDHFSIISLNQGEIFLCSPG*PGTFNY Trigger: GTAGTTAAAAGTTCCAGGCCAGCCTGGGCTACATAG...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAGAGAAAACAGATTGGTaGCCTCATGCTGTCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: GKSHESRSLQYYFLKPRREKTDW*PHAVTF Trigger: GAATGTGACAGCATGAGGCCACCAATCTGTTTTCTC...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 72 bp | CAGTGCACTCACCCTAGAGCAGAAGTAGCTCCTTATTaGCAGGAAGTGGGGTGGCATCTGGAAGTGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QCTHPRAEVAPY*QEVGWHLEVLG Trigger: CCCCAGCACTTCCAGATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | CCCAACCCGGGACTCCTGCTATGTTTCCTCAGCCCATaGCTAGACAGCACTGAACAGCAGAGGAGATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PNPGLLLCFLSP*LDSTEQQRRWM Trigger: CATCCATCTCCTCTGCTGTTCAGTGCTGTCTAGTCATGGGCTGAGGAAACATAGCAGGAGTCCCGGGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTGGCCAGGGGGTATTCTaGGCAGGAGGTGGGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAGQGVF*AGGGKS Trigger: TGATTTCCCACCTCCTGCCAAGAATACCCCCTGGCC...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | CCCTGGGCTTGGCATCTGCCCATAGGCTCTAAGAGGTaGGCCTTTGTGTGCCCATGTGGCAATCATAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PWAWHLPIGSKR*AFVCPCGNHKS Trigger: ACTCTTATGATTGCCACATGGGCACACAAAGGCTCACCTCTTAGAGCCTATGGGCAGATGCCAAGCCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR GCA 72 bp | GCCAGGGGGTATTCTTGGCAGGAGGTGGGAAATCAGTaGACTCACCCTAGAGCAGAAGTAGCTCCTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: ARGYSWQEVGNQ*THPRAEVAPYW Trigger: CCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCACTGATTTCCCACCTCCTGCCAAGAATACCCCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 72 bp | AGAAGCCTCCTTTCCCCTAGAACAAAGCTGTTCTCGTaGGCCTCAGCTGAGGAGCTAAAGGAGCTCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSLLSPRTKLFS*ASAEELKELFR Trigger: TCTGAAGAGCTCCTTTAGCTCCTCAGCTGAGGCCCACGAGAACAGCTTTGTTCTAGGGGAAAGGAGGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTACCCAGGGCCTCACTCTaGCTAGGTGAGCCCCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DLGTSVVSDPEERSFKGLPRASL*LGEPPF Trigger: AAAAGGGGGCTCACCTAGCAAGAGTGAGGCCCTGGG...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAATTTCCCATTTCCCCTaGCCCTGTCAGGCTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: FFPARTCVTLQANQSHVPISHFP*PCQARS Trigger: GGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAAT...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAGGCCAGGGGGTATTCTaGGCAGGAGGTGGGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NRLVASCCHIPKSVGKTEGQGVF*AGGGKS Trigger: TGATTTCCCACCTCCTGCCAAGAATACCCCCTGGCC...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | GACACCAGGTCTAGATCTTGGTACATCCGTGGTCAGTaGCCCAGAAGAAAGGTCTTTCAAAGGCTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTRSRSWYIRGQ*PRRKVFQRLRW Trigger: CCACCTAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATCTAGACCTGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTAAGAAGTAGCTCCTTATaGGCAGGAAGTGGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DLGTSVVSDPEERSFKGLRSSSL*AGSGVA Trigger: TGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCT...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAAATCTGTGGCCCTTCTaGGGCACTGTTGATGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: NRLVASCCHIPKSVGKTENLWPF*GTVDGY Trigger: GTACCCATCAACAGTGCCCAAGAAGGGCCACAGATT...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAATTTCCCATTTCCCCTaGCCCTGTCAGGCTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: NRLVASCCHIPKSVGKTEISHFP*PCQARS Trigger: GGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAAT...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | GAGACAAACTGGAAACACCGCAGGGGTCTGAGAATCTaGGTGTTAAAGGCTTCTAGGGGACAGCTGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ETNWKHRRGLRI*VLKASRGQLRK Trigger: TTTTCTCAGCTGTCCCCTAGAAGCCTTTAACACTCAGATTCTCAGACCCCTGCGGTGTTTCCAGTTTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 72 bp | TTTCAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTaGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FQLGRPFPLGIL*VVRLTSQSWSV Trigger: GACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAAAGCCTTTCCTTAAGATaGTGCAGGAGGGGATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NRLVASCCHIPKSVGKTESLSLR*CRRGSV Trigger: CACTGATCCCCTCCTGCACAATCTTAAGGAAAGGCT...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAACCCTCTTGGTATTCTTaGGGTAGTCAGGCTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: NRLVASCCHIPKSVGKTEPSWYS*GSQADK Trigger: CTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGG...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAGAAGTAGCTCCTTATaGGCAGGAAGTGGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKSHESRSLQYYFLKPRRRSSSL*AGSGVA Trigger: TGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCT...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGCAATCATAAGAGTAGTCAAGGGATACAGCTGATAATCTGTGGCCCTTCTTTTTTCTGTTCAAAATaGGGTCCTCGCAGCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGNHKSSQGIQLIICGPSFFCSK*GPRSTR Trigger: TCTGGTGCTGCGAGGACCCAATTTTGAACAGAAAAA...AGAAGGGCCACAGATTATCAGCTGTATCCCTTGACTACTCTTATGATTGCCACA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | GCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATaGGGCTCACACCAAAGAATCCTGTTAAGTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AHLCLRAEHTQV*GSHQRILLSLS Trigger: ACTCAGACTTAACAGGATTCTTTGGTGTGAGCCTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | TCCTTAAACCAAGGAGAAATTTTCAGTCAAAGAAGATaGATGCCCAACCCGGGACTCCTGCTATGTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLNQGEIFSQRR*MPNPGLLLCFL Trigger: GAGGAAACATAGCAGGAGTCCCGGGTTGGGCATTCATCTTCTTTGACTGAAAATTTCTCCTTGGTTTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAGCCTTTCCTTAAGATaGTGCAGGAGGGGATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GKSHESRSLQYYFLKPRRSLSLR*CRRGSV Trigger: CACTGATCCCCTCCTGCACAATCTTAAGGAAAGGCT...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGACCCTCTTGGTATTCTTaGGGTAGTCAGGCTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: GKSHESRSLQYYFLKPRRPSWYS*GSQADK Trigger: CTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGG...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CCA 72 bp | TTAAAACCATTTTCAACTTGGACGTCCTTTCCCTCTTaGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKPFSTWTSFPS*YSLGSQADKPK Trigger: CTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTGAAAATGGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR TCA 72 bp | AGAAAAAGCTTTGGGTCAAGGCAGAATAGATTCCCCTaGATGATAGACATACAAAGTGCTTTAAAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RKSFGSRQNRFP*MIDIQSALKMG Trigger: ACCCATCTTTAAAGCACTTTGTATGTCTATCATTCAGGGGAATCTATTCTGCCTTGACCCAAAGCTTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTGGTGCAGCACACCTCTaGCAGCTTACGGCCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAGAAHL*QLTALA Trigger: GGCCAGGGCCGTAAGCTGGCAGAGGTGTGCTGCACC...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCATCACTGGGGGAAGCCTaGCTGCGGCTCCGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPARTCVTLQANQSHVPSLGEA*LRLRLV Trigger: CACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGA...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTAGAGCACGCGGCCGTTaGAGCGCAGGGACAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVIPPRLLHSWDYRYGHARARGR*SAGTAC Trigger: ACAAGCTGTCCCTGCGCTTCAACGGCCGCGTGCTCT...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAAGAGCACGCGGCCGTTaGAGCGCAGGGACAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFPARTCVTLQANQSHVPRARGR*SAGTAC Trigger: ACAAGCTGTCCCTGCGCTTCAACGGCCGCGTGCTCT...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CATAGGGTGGCCAATGGGTACGTTCCACAGGGTGGCAGACAGGACTTCTTGTGCCGTACACAATCGAGGTaGAGCACACCTCTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRVANGYVPQGGRQDFLCRTQSR*STPLPA Trigger: AGCTGGCAGAGGTGTGCTGCACCTCGATTGTGTACG...GCACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTACCCATTGGCCACCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAATGGGGGAAGCCTGGCTaGGGCTCCGGCTTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRLVASCCHIPKSVGKTEWGKPG*GSGLWP Trigger: AGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCA...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTTGGGGGAAGCCTGGCTaGGGCTCCGGCTTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGILWVVRLTSQSWSVYFWGKPG*GSGLWP Trigger: AGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCA...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCTCCTGCAGGGCAGTCTaGCACGTGCTCACCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGRPFPLGILWVVRLTSSCRAV*HVLTSP Trigger: AGGGCTGGTGAGCACGTGCCAGACTGCCCTGCAGGA...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | TGCACTCACCCTAGAGCAGAAGTAGCTCCTTATTGGCAGGAAGTGGGGTGGCATTGTCTTCATCTTCACTaGGGGAAGCCTGGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTHPRAEVAPYWQEVGWHCLHLH*GKPGCG Trigger: GCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACA...ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTCTTGGCCCCCGAGGCTaGACACAGACAGGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGILWVVRLTSQSWSVYFLGPRG*TQTGVP Trigger: GGGGACACCTGTCTGTGTCCAGCCTCGGGGGCCAAG...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTACTTGGCCCCCGAGGCTaGACACAGACAGGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLGTSVVSDPEERSFKGLLGPRG*TQTGVP Trigger: GGGGACACCTGTCTGTGTCCAGCCTCGGGGGCCAAG...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGGGAGGTAATTCAAGATaGTGCCAAAGTGCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVGGNSR*CQSAFH Trigger: GTGGAAAGCACTTTGGCACCATCTTGAATTACCTCC...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CATAGGGTGGCCAATGGGTACGTTCCACAGGGTGGCAGACAGGACTTCTTGTGCCTGGGAATTCCACCTTaGTCTGCTTCTTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRVANGYVPQGGRQDFLCLGIPP*SASSLW Trigger: CCACAGAGAAGAAGCAGACCAAGGTGGAATTCCCAG...GCACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTACCCATTGGCCACCCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCGGCTTTGAGGGAGGGTaGTGGTGTCATCTCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGRPFPLGILWVVRLTSGFEGG*WCHLGG Trigger: ACCTCCGAGATGACACCATCACCCTCCCTCAAAGCC...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGTCACCAGCCCTTGAATaGGGTAATATTTTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVSPALE*GNILLQ Trigger: CTGAAGCAAAATATTACCTCATTCAAGGGCTGGTGA...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCACCTCCCACATTGAGCTaGACGTACTTGTTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFPARTCVTLQANQSHVPPPTLS*TYLLPS Trigger: GCTGGGCAACAAGTACGTGCAGCTCAATGTGGGAGG...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTTTGAGCATGGTGTCGTaGCGGGTGAGGGCCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGILWVVRLTSQSWSVYFLSMVS*RVRART Trigger: AGTGCGGGCCCTCACCCGGCACGACACCATGCTCAA...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGCAATCATAAGAGTAGTCAAGGGATACAGCTGATAATCTGTGGCCCTTCTGGTGCAGCACACCTCTaGCAGCTTACGGCCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGNHKSSQGIQLIICGPSGAAHL*QLTALA Trigger: GGCCAGGGCCGTAAGCTGGCAGAGGTGTGCTGCACC...AGAAGGGCCACAGATTATCAGCTGTATCCCTTGACTACTCTTATGATTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | TGCACTCACCCTAGAGCAGAAGTAGCTCCTTATTGGCAGGAAGTGGGGTGGCATATAGATACGGGCCTCTaGGAATTCCACCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPRAEVAPYWQEVGWHIDTGL*EFHLGL Trigger: CAGACCAAGGTGGAATTCCCAGAGGCCCGTATCTAT...ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTGGCTTTGAGGGAGGGTaGTGGTGTCATCTCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGILWVVRLTSQSWSVYFGFEGG*WCHLGG Trigger: ACCTCCGAGATGACACCATCACCCTCCCTCAAAGCC...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TATCAGGGGCTGCAGCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATGAGGAGTCTTTCTTGTCCTaGAGGGCAGTCTGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: YQGLQHICVLELNIPKYEESFLS*RAVWHV Trigger: CACGTGCCAGACTGCCCTGCAGGACAAGAAAGACTC...CTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGCTGCAGCCCCTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAATAGATACGGGCCTCTaGGAATTCCACCTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPARTCVTLQANQSHVPIDTGL*EFHLGL Trigger: CAGACCAAGGTGGAATTCCCAGAGGCCCGTATCTAT...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | AACAGATTGGTGGCCTCATGCTGTCACATTCCAAAGTCTGTGGGAAAGACTGAACCTCCCACATTGAGCTaGACGTACTTGTTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRLVASCCHIPKSVGKTEPPTLS*TYLLPS Trigger: GCTGGGCAACAAGTACGTGCAGCTCAATGTGGGAGG...TTCAGTCTTTCCCACAGACTTTGGAATGTGACAGCATGAGGCCACCAATCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTCGTACACAATCGAGGTaGAGCACACCTCTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGILWVVRLTSQSWSVYFRTQSR*STPLPA Trigger: AGCTGGCAGAGGTGTGCTGCACCTCGATTGTGTACG...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCTGGGAATTCCACCTTaGTCTGCTTCTTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGRPFPLGILWVVRLTSLGIPP*SASSLW Trigger: CCACAGAGAAGAAGCAGACCAAGGTGGAATTCCCAG...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTATGCGGCTCCGGCTTGTaGCCTCCAGTAAGGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGTSVVSDPEERSFKGLCGSGL*PPVRNC Trigger: ACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCA...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGATCACTGGGGGAAGCCTaGCTGCGGCTCCGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSHESRSLQYYFLKPRRSLGEA*LRLRLV Trigger: CACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGA...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAGGAGGTAATTCAAGATaGTGCCAAAGTGCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFPARTCVTLQANQSHVPGGNSR*CQSAFH Trigger: GTGGAAAGCACTTTGGCACCATCTTGAATTACCTCC...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCCATTTCCCCTTGCCCTGTCAGGCTAGATCCTTGTGAGAGCCCAACCCTGAATGAGGTAATATTTTaGTTCAGCCATCAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPISPCPVRLDPCESPTLNEVIF*FSHQLL Trigger: CAGGAGTTGATGGCTGAAGCAAAATATTACCTCATT...CAGGGTTGGGCTCTCACAAGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTGGTGATCATCAGAGTTaGTGGTGTATGAGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAGDHQS*WCMSTC Trigger: ACAAGTACTCATACACCAGCAACTCTGATGATCACC...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTCATAGAGTAGGACATTaGGTGTTTCCTCATAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAHRVGH*VFPHRY Trigger: GTATCTATGAGGAAACACTCAATGTCCTACTCTATG...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTTTGAGCATGGTGTCGTaGCGGGTGAGGGCCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SHESRSLQYYFLKPRRNFLSMVS*RVRART Trigger: AGTGCGGGCCCTCACCCGGCACGACACCATGCTCAA...AAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | TGCACTCACCCTAGAGCAGAAGTAGCTCCTTATTGGCAGGAAGTGGGGTGGCATAATGAGGTAATATTTTaGTTCAGCCATCAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTHPRAEVAPYWQEVGWHNEVIF*FSHQLL Trigger: CAGGAGTTGATGGCTGAAGCAAAATATTACCTCATT...ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CAA 72 bp | TTTTCAACTTGGACGTCCTTTCCCTCTTGGTATTCTTaGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTWTSFPSWYS*GSQADKPKLVS Trigger: ACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| 3UTR CAA 72 bp | AAAGAAAGGGAGGGAAACCAAAGCGCAAAGGAAGAATaGACACCAGGTCTAGATCTTGGTACATCCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEREGNQSAKEE*TPGLDLGTSVV Trigger: GACCACGGATGTACCAAGATCTAGACCTGGTGTCAATTCTTCCTTTGCGCTTTGGTTTCCCTCCCTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGATGCGGCTCCGGCTTGTaGCCTCCAGTAAGGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSHESRSLQYYFLKPRRCGSGL*PPVRNC Trigger: ACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCA...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CCA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCTGTCTTCATCTTCACTaGGGGAAGCCTGGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSPDHFSIISLNQGEIFCLHLH*GKPGCG Trigger: GCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACA...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR GCA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTAGGTAATTCAAGATGGTaGCAAAGTGCTTTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: DLGTSVVSDPEERSFKGLGNSRW*QSAFHI Trigger: GATGTGGAAAGCACTTTGGCACCATCTTGAATTACC...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR TCA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCCATAGAGTAGGACATTaGGTGTTTCCTCATAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LTSPDHFSIISLNQGEIFHRVGH*VFPHRY Trigger: GTATCTATGAGGAAACACTCAATGTCCTACTCTATG...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CCA 90 bp | TGCGACGGACACGGTCCCGTAGTTCAAAGGTGTCTTCATCTTCACTaGGGGAAGCCTGGCTGCGGCTCCGGCTTGTGGCCTCCAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CDGHGPVVQRCLHLH*GKPGCGSGLWPPVR Trigger: CCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCTTTGAACTACGGGACCGTGTCCGTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCCATTTCCCCTTGCCCTGTCAGGCTAGATCCTTGTGAGAGCCCAACCCTGCCCAGCCCGCCTCCCTaGAAGCCACTGATCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPISPCPVRLDPCESPTLPSPPP*KPLILG Trigger: GCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGG...CAGGGTTGGGCTCTCACAAGGATCTAGCCTGACAGGGCAAGGGGAAATGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CCA 90 bp | CGGTCCCGTAGTTCAAAGGTGTCTTCATCTTCACTGGGGGAAGCCTaGCTGCGGCTCCGGCTTGTGGCCTCCAGTAAGGAATTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSSKVSSSSLGEA*LRLRLVASSKELSG Trigger: CCCTGACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCTTTGAACTACGGGACCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS GCA 90 bp | CCCGTAGTTCAAAGGTGTCTTCATCTTCACTGGGGGAAGCCTGGCTaGGGCTCCGGCTTGTGGCCTCCAGTAAGGAATTGTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PVVQRCLHLHWGKPG*GSGLWPPVRNCQGL Trigger: GAGTCCCTGACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCTTTGAACTACGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CCA 90 bp | TGTCTTCATCTTCACTGGGGGAAGCCTGGCTGCGGCTCCGGCTTGTaGCCTCCAGTAAGGAATTGTCAGGGACTCGAGGGGTCTCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLHLHWGKPGCGSGL*PPVRNCQGLEGSHR Trigger: TCTATGAGACCCCTCGAGTCCCTGACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCACCCAGCCCGCCTCCCTaGAAGCCACTGATCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFPARTCVTLQANQSHVPPSPPP*KPLILG Trigger: GCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGG...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CATAGGGTGGCCAATGGGTACGTTCCACAGGGTGGCAGACAGGACTTCTTGTGCGATTTCTTGCCGGCTTaGAGGGAGGGTGATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRVANGYVPQGGRQDFLCDFLPA*REGDGV Trigger: GACACCATCACCCTCCCTCAAAGCCGGCAAGAAATC...GCACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTACCCATTGGCCACCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTCACCCTAGAGCAGAAGTAGCTCCTTATTGGCAGGAAGTGGGGTGGCATCAACTCCTGGATTTCTaGCCGGCTTTGAGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CTHPRAEVAPYWQEVGWHQLLDF*PALREG Trigger: ACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTG...ATGCCACCCCACTTCCTGCCAATAAGGAGCTACTTCTGCTCTAGGGTGAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CCCACAGCTGTGAGCTGGCCAGGCTCTGCTCACTGGAAACATGGCTCAGCAGTGCTGGTGTATGAGTACTaGTTGTTGCTCCTGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PTAVSWPGSAHWKHGSAVLVYEY*LLLLLY Trigger: GTACAACAGGAGCAACAACAAGTACTCATACACCAG...CACTGCTGAGCCATGTTTCCAGTGAGCAGAGCCTGGCCAGCTCACAGCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TATCAGGGGCTGCAGCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATGAGTTGAAGCCACTGATCTaGGGCTTGGCCCCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YQGLQHICVLELNIPKYELKPLI*GLAPEA Trigger: AGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAA...CTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGCTGCAGCCCCTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CATAGGGTGGCCAATGGGTACGTTCCACAGGGTGGCAGACAGGACTTCTTGTGCCGTGCTCACCAGCCCTaGAATGAGGTAATATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRVANGYVPQGGRQDFLCRAHQP*NEVIFC Trigger: GCAAAATATTACCTCATTCAAGGGCTGGTGAGCACG...GCACAAGAAGTCCTGTCTGCCACCCTGTGGAACGTACCCATTGGCCACCCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCTCCCCAATGACATCCTaGATGAAGAGCACGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLGRPFPLGILWVVRLTSSPMTS*MKSTRP Trigger: CGGCCGCGTGCTCTTCATCAAGGATGTCATTGGGGA...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTGGACTGATGGCCAAGTaGCCGGTCATCGTAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAGLMAK*PVIVSA Trigger: AGCACTTACGATGACCGGCAACTTGGCCATCAGTCC...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 90 bp | TGGACTGATGGCCAAGTTGCCGGTCATCGTAAGTGCTATAGCGCTTaGCATGAATGCGACGGACACGGTCCCGTAGTTCAAAGGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WTDGQVAGHRKCYSA*HECDGHGPVVQRCL Trigger: AAGACACCTTTGAACTACGGGACCGTGTCCGTCGCATTCATGTCAAGCGCTATAGCACTTACGATGACCGGCAACTTGGCCATCAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS GCA 90 bp | GGCAGTCTGGCACGTGCTCACCAGCCCTTGAATGAGGTAATATTTTaGTTCAGCCATCAACTCCTGGATTTCTTGCCGGCTTTGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLARAHQPLNEVIF*FSHQLLDFLPALRE Trigger: CTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAGCAAAATATTACCTCATTCAAGGGCTGGTGAGCACGTGCCAGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 90 bp | CTTCAGCCATCAACTCCTGGATTTCTTGCCGGCTTTGAGGGAGGGTaGTGGTGTCATCTCGGAGGTAATTCAAGATGGTGCCAAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQPSTPGFLAGFEGG*WCHLGGNSRWCQSA Trigger: AGCACTTTGGCACCATCTTGAATTACCTCCGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 90 bp | TCTTGTCCTGCAGGGCAGTCTGGCACGTGCTCACCAGCCCTTGAATaGGGTAATATTTTGCTTCAGCCATCAACTCCTGGATTTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCPAGQSGTCSPALE*GNILLQPSTPGFLA Trigger: GGCAAGAAATCCAGGAGTTGATGGCTGAAGCAAAATATTACCTCATTCAAGGGCTGGTGAGCACGTGCCAGACTGCCCTGCAGGACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | GATCTTGGTACATCCGTGGTCAGTGACCCAGAAGAAAGGTCTTTCAAAGGCTTATCCCCAATGACATCCTaGATGAAGAGCACGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLGTSVVSDPEERSFKGLSPMTS*MKSTRP Trigger: CGGCCGCGTGCTCTTCATCAAGGATGTCATTGGGGA...TAAGCCTTTGAAAGACCTTTCTTCTGGGTCACTGACCACGGATGTACCAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCCAAAGCTGGTCAGTCTACTTTCAACTCCTGGATTTCTaGCCGGCTTTGAGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGILWVVRLTSQSWSVYFQLLDF*PALREG Trigger: ACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTG...AAAGTAGACTGACCAGCTTTGGCTTGTCAGCCTGACTACCCAAAGAATACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CAACTTGGACGTCCTTTCCCTCTTGGTATTCTTTGGGTAGTCAGGCTGACAAGCTCTGGGAATTCCACCTaGGTCTGCTTCTTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLGRPFPLGILWVVRLTSSGNST*VCFFSV Trigger: CACAGAGAAGAAGCAGACCAAGGTGGAATTCCCAGA...GCTTGTCAGCCTGACTACCCAAAGAATACCAAGAGGGAAAGGACGTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CATGTTATCCCACCTCGGCTTCTCCATAGCTGGGATTATAGGTACGGCCATGCTTATGAGTACTTGTTGTaGCTCCTGTTGTACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HVIPPRLLHSWDYRYGHAYEYLL*LLLYSS Trigger: GCTGCTGTACAACAGGAGCAACAACAAGTACTCATA...AGCATGGCCGTACCTATAATCCCAGCTATGGAGAAGCCGAGGTGGGATAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCCTGCCAGAACCTGTGTTACCCTTCAGGCCAACCAGTCACATGTCCCAGTGTATGAGTACTTGTaGTTGCTCCTGTTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFPARTCVTLQANQSHVPVYEYL*LLLLYS Trigger: GCTGTACAACAGGAGCAACAACAAGTACTCATACAC...TGGGACATGTGACTGGTTGGCCTGAAGGGTAACACAGGTTCTGGCAGGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TATCAGGGGCTGCAGCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATGAGAGAATCCAGCCTTCTTaGTCAGTCAGCACCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: YQGLQHICVLELNIPKYERIQPS*SVSTSI Trigger: AATGGAGGTGCTGACTGACAAAGAAGGCTGGATTCT...CTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGCTGCAGCCCCTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCTTGAAGCCACTGATCTaGGGCTTGGCCCCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSPDHFSIISLNQGEIFLKPLI*GLAPEA Trigger: AGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAA...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TATCAGGGGCTGCAGCACATCTGTGTCTTAGAGCTGAACATACCCAAGTATGAGCTGGTGTATGAGTACTaGTTGTTGCTCCTGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YQGLQHICVLELNIPKYELVYEY*LLLLLY Trigger: GTACAACAGGAGCAACAACAAGTACTCATACACCAG...CTCATACTTGGGTATGTTCAGCTCTAAGACACAGATGTGCTGCAGCCCCTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | GGTAAATCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAGGACTGATGGCCAAGTaGCCGGTCATCGTAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKSHESRSLQYYFLKPRRGLMAK*PVIVSA Trigger: AGCACTTACGATGACCGGCAACTTGGCCATCAGTCC...TCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGATTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCGATTTCTTGCCGGCTTaGAGGGAGGGTGATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTSPDHFSIISLNQGEIFDFLPA*REGDGV Trigger: GACACCATCACCCTCCCTCAAAGCCGGCAAGAAATC...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | CTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTCTCTGGGAATTCCACCTaGGTCTGCTTCTTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTSPDHFSIISLNQGEIFSGNST*VCFFSV Trigger: CACAGAGAAGAAGCAGACCAAGGTGGAATTCCCAGA...GAAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTTATGAGTACTTGTTGTaGCTCCTGTTGTACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHESRSLQYYFLKPRRNFYEYLL*LLLYSS Trigger: GCTGCTGTACAACAGGAGCAACAACAAGTACTCATA...AAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACGAGTCCAGATCACTTCAGTATTATTTCCTTAAACCAAGGAGAAATTTTGTGTATGAGTACTTGTaGTTGCTCCTGTTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHESRSLQYYFLKPRRNFVYEYL*LLLLYS Trigger: GCTGTACAACAGGAGCAACAACAAGTACTCATACAC...AAAATTTCTCCTTGGTTTAAGGAAATAATACTGAAGTGATCTGGACTCGTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | CCCAGCCCGCCTCCCTTGAAGCCACTGATCTTGGGCTaGGCCCCCGAGGCTGGACACAGACAGGTGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPPPLKPLILG*APEAGHRQVSP Trigger: AGGGGACACCTGTCTGTGTCCAGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | TTGTTGCCCAGCCCGCCTCCCTTGAAGCCACTGATCTaGGGCTTGGCCCCCGAGGCTGGACACAGACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPSPPPLKPLI*GLAPEAGHRQV Trigger: CACCTGTCTGTGTCCAGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGGCAACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | TGCACGTACTTGTTGCCCAGCCCGCCTCCCTTGAAGCCACTGATCTaGGGCTTGGCCCCCGAGGCTGGACACAGACAGGTGTCCCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CTYLLPSPPPLKPLI*GLAPEAGHRQVSPD Trigger: GTCAGGGGACACCTGTCTGTGTCCAGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGGCAACAAGTACGTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | CCTCCCACATTGAGCTGCACGTACTTGTTGCCCAGCCCGCCTCCCTaGAAGCCACTGATCTTGGGCTTGGCCCCCGAGGCTGGACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPTLSCTYLLPSPPP*KPLILGLAPEAGHR Trigger: TCTGTGTCCAGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGGCAACAAGTACGTGCAGCTCAATGTGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 72 bp | CCCGCACTGTGGTGTAGTACAGGGAGCCTCCCACATTaGGCTGCACGTACTTGTTGCCCAGCCCGCCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PALWCSTGSLPH*AARTCCPARLP Trigger: AGGGAGGCGGGCTGGGCAACAAGTACGTGCAGCTCAATGTGGGAGGCTCCCTGTACTACACCACAGTGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | TTGAGCTGCACGTACTTGTTGCCCAGCCCGCCTCCCTaGAAGCCACTGATCTTGGGCTTGGCCCCCGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSCTYLLPSPPP*KPLILGLAPEA Trigger: AGCCTCGGGGGCCAAGCCCAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGGCAACAAGTACGTGCAGCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | CATCTTCACTGGGGGAAGCCTGGCTGCGGCTCCGGCTaGTGGCCTCCAGTAAGGAATTGTCAGGGACTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: HLHWGKPGCGSG*WPPVRNCQGLE Trigger: CTCGAGTCCCTGACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | AGGTGTCTTCATCTTCACTGGGGGAAGCCTGGCTGCGGCTCCGGCTaGTGGCCTCCAGTAAGGAATTGTCAGGGACTCGAGGGGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RCLHLHWGKPGCGSG*WPPVRNCQGLEGSH Trigger: ATGAGACCCCTCGAGTCCCTGACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | TACAGGGAGCCTCCCACATTGAGCTGCACGTACTTGTaGCCCAGCCCGCCTCCCTTGAAGCCACTGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: YREPPTLSCTYL*PSPPPLKPLIL Trigger: CAAGATCAGTGGCTTCAAGGGAGGCGGGCTGGGCAACAAGTACGTGCAGCTCAATGTGGGAGGCTCCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS GCA 72 bp | CAAAGGTGTCTTCATCTTCACTGGGGGAAGCCTGGCTaGGGCTCCGGCTTGTGGCCTCCAGTAAGGAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: QRCLHLHWGKPG*GSGLWPPVRNC Trigger: ACAATTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CCA 72 bp | AGTTCAAAGGTGTCTTCATCTTCACTGGGGGAAGCCTaGCTGCGGCTCCGGCTTGTGGCCTCCAGTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSKVSSSSLGEA*LRLRLVASSKE Trigger: TTCCTTACTGGAGGCCACAAGCCGGAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAAGACACCTTTGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 72 bp | GGCCAAGTTGCCGGTCATCGTAAGTGCTATAGCGCTTaGCATGAATGCGACGGACACGGTCCCGTAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GQVAGHRKCYSA*HECDGHGPVVQ Trigger: TTGAACTACGGGACCGTGTCCGTCGCATTCATGTCAAGCGCTATAGCACTTACGATGACCGGCAACTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 72 bp | GCAGGGCAGTCTGGCACGTGCTCACCAGCCCTTGAATaGGGTAATATTTTGCTTCAGCCATCAACTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGQSGTCSPALE*GNILLQPSTPG Trigger: TCCAGGAGTTGATGGCTGAAGCAAAATATTACCTCATTCAAGGGCTGGTGAGCACGTGCCAGACTGCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS TCA 72 bp | TCAACTCCTGGATTTCTTGCCGGCTTTGAGGGAGGGTaGTGGTGTCATCTCGGAGGTAATTCAAGATGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: STPGFLAGFEGG*WCHLGGNSRWC Trigger: GCACCATCTTGAATTACCTCCGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | TGCTTCAGCCATCAACTCCTGGATTTCTTGCCGGCTTaGAGGGAGGGTGATGGTGTCATCTCGGAGGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: CFSHQLLDFLPA*REGDGVISEVI Trigger: AATTACCTCCGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | GTCTTTCTTGTCCTGCAGGGCAGTCTGGCACGTGCTCACCAGCCCTaGAATGAGGTAATATTTTGCTTCAGCCATCAACTCCTGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VFLVLQGSLARAHQP*NEVIFCFSHQLLDF Trigger: GAAATCCAGGAGTTGATGGCTGAAGCAAAATATTACCTCATTCAAGGGCTGGTGAGCACGTGCCAGACTGCCCTGCAGGACAAGAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 72 bp | GTAATATTTTGCTTCAGCCATCAACTCCTGGATTTCTaGCCGGCTTTGAGGGAGGGTGATGGTGTCATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VIFCFSHQLLDF*PALREGDGVIS Trigger: CGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAGCAAAATATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | GTAATATTTTGCTTCAGCCATCAACTCCTGGATTTCTTGCCGGCTTaGAGGGAGGGTGATGGTGTCATCTCGGAGGTAATTCAAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VIFCFSHQLLDFLPA*REGDGVISEVIQDG Trigger: ACCATCTTGAATTACCTCCGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAGCAAAATATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||
| CDS CAA 90 bp | TTGAATGAGGTAATATTTTGCTTCAGCCATCAACTCCTGGATTTCTaGCCGGCTTTGAGGGAGGGTGATGGTGTCATCTCGGAGGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: LNEVIFCFSHQLLDF*PALREGDGVISEVI Trigger: AATTACCTCCGAGATGACACCATCACCCTCCCTCAAAGCCGGCAAGAAATCCAGGAGTTGATGGCTGAAGCAAAATATTACCTCATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017759.9 ENSMUST00000108277.3 |
||