Pregenerated sensors for TMX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034723Ensembl transcript IDs: ENSMUST00000038228.11, ENSMUST00000110119.2, ENSMUST00000110120.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGCCCGACAAGGCCATCCTCTGCTACCTATGTGGCTGGAGCCATaGTTCCCTCCATGTGAATTCCTTGGTTGGTGGTTTAGACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: EARQGHPLLPMWLEP*FPPCEFLGWWFRPW Trigger: CCAGGGTCTAAACCACCAACCAAGGAATTCACATGGAGGGAACCATGGCTCCAGCCACATAGGTAGCAGAGGATGGCCTTGTCGGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR TCA 90 bp | GGTTTCTCAGTTGAGTCTCCTGCTTTGGGTAGCTGCTCAAAGAACTaGCCTAGCAGGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: GFSVESPALGSCSKN*PSRFHETPPWLLSE Trigger: TTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACCTGCTAGGTCAGTTCTTTGAGCAGCTACCCAAAGCAGGAGACTCAACTGAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR GCA 90 bp | GAGCTCATACAGATAGGACAATGGGCTGTGGTGTTCAGAAACCCTTaGATTAACCTTGGGCACACTGCATGGATTTTACCAAGTCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: ELIQIGQWAVVFRNP*INLGHTAWILPSPS Trigger: ACTTGGACTTGGTAAAATCCATGCAGTGTGCCCAAGGTTAATGCAAGGGTTTCTGAACACCACAGCCCATTGTCCTATCTGTATGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR GCA 90 bp | TCTATGCCTAGAAAGGCCATCCCTTACTCTAGACATCTAGATTGTTaGAGCCAGCACTACATGGTCTGCTGTGTCCCAGAAAGAGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SMPRKAIPYSRHLDC*SQHYMVCCVPERVL Trigger: TAAGACTCTTTCTGGGACACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGGGATGGCCTTTCTAGGCATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR GCA 90 bp | CCTTACTCTAGACATCTAGATTGTTGCAGCCAGCACTACATGGTCTaGTGTGTCCCAGAAAGAGTCTTAGGTTTGGAGTTTATCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: PYSRHLDCCSQHYMV*CVPERVLGLEFICI Trigger: GATGCAGATAAACTCCAAACCTAAGACTCTTTCTGGGACACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR TCA 90 bp | AGCCTCACTTCTAAAGGTGCTAATGAGAACTGCAGAGAAGTCCTCTaGTTTACTCTTTGGCTCCCAAGCACATCAACTTGTTCTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: SLTSKGANENCREVL*FTLWLPSTSTCSLQ Trigger: TTGAAGAGAACAAGTTGATGTGCTTGGGAGCCAAAGAGTAAATCAGAGGACTTCTCTGCAGTTCTCATTAGCACCTTTAGAAGTGAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR TCA 90 bp | GTTGGCCCTAAAAGGTCAAAGTGTAGCTTTTCAGCTGTCCAAAGCTaGTCTGTGTCAAGCTTGTTTGCCTTCCATTGCACTAGTTATTAT | + |
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Preference number: 1 (lower is better) Translates to: VGPKRSKCSFSAVQS*SVSSLFAFHCTSYY Trigger: ATAATAACTAGTGCAATGGAAGGCAAACAAGCTTGACACAGATCAGCTTTGGACAGCTGAAAAGCTACACTTTGACCTTTTAGGGCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR GCA 90 bp | CTAAGGTTTCTTGTCTCCACTTATAGTATGAATAGCTACAAGATGTaGTCTAACAGCCTTCTGCAGGTTTCAAGAAAGGGACCTTATGGA | + |
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Preference number: 1 (lower is better) Translates to: LRFLVSTYSMNSYKM*SNSLLQVSRKGPYG Trigger: TCCATAAGGTCCCTTTCTTGAAACCTGCAGAAGGCTGTTAGAGCACATCTTGTAGCTATTCATACTATAAGTGGAGACAAGAAACCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR GCA 90 bp | AAAGAGATTCCCCCATTTAAATCACAGGAAACACATATGCATGCATaGGCAGGAACTGCTACAGAGTTTATCTTAAGTCTACTCTTATTA | + |
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Preference number: 1 (lower is better) Translates to: KEIPPFKSQETHMHA*AGTATEFILSLLLL Trigger: TAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGCATATGTGTTTCCTGTGATTTAAATGGGGGAATCTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCGGGTGGTGGTGGTGGTGCACGGCTTTAATCCCAGCCCCTGGGTGGCAGAGTGGCAGAAGAGAAGGTaGAGCTCAGCTCTATTAGGA | + |
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Preference number: 2 (lower is better) Translates to: MRVVVVVHGFNPSPWVAEWQKRR*SSALLG Trigger: TCCTAATAGAGCTGAGCTGCACCTTCTCTTCTGCCA...CTCTGCCACCCAGGGGCTGGGATTAAAGCCGTGCACCACCACCACCACCCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | ATGCGGGTGGTGGTGGTGGTGCACGGCTTTAATCCCAGCCCCTGGGTGGCAGAGCCTTTCCCACCACTCTaGACTTGGATTTACTATTGC | + |
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Preference number: 2 (lower is better) Translates to: MRVVVVVHGFNPSPWVAEPFPPL*TWIYYC Trigger: GCAATAGTAAATCCAAGTTCAGAGTGGTGGGAAAGG...CTCTGCCACCCAGGGGCTGGGATTAAAGCCGTGCACCACCACCACCACCCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | TCCTACACTGGGGCATCGAGTCTTCACAGGTCCAAGGGACTCTTATaGAAGCCCGACAAGGCCATCCTCTGCTACCTATGTGGCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SYTGASSLHRSKGLL*KPDKAILCYLCGWS Trigger: GCTCCAGCCACATAGGTAGCAGAGGATGGCCTTGTCGGGCTTCAATAAGAGTCCCTTGGACCTGTGAAGACTCGATGCCCCAGTGTAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCGGGTGGTGGTGGTGGTGCACGGCTTTAATCCCAGCCCCTGGGTGGCAGAGAGGATGCTCTGGTTTTaGTGTCACTTTATCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MRVVVVVHGFNPSPWVAERMLWF*CHFIKQ Trigger: CTGCTTGATAAAGTGACAGCAAAACCAGAGCATCCT...CTCTGCCACCCAGGGGCTGGGATTAAAGCCGTGCACCACCACCACCACCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCTGTTTCTATGAGGCTGTGCCGGCACCTACCCACCCACTCCCACCTCCTCGATCAATACCTCCATaGACAGGTAAATTCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: SPCFYEAVPAPTHPLPPPRSIPP*TGKFYA Trigger: GGCATAGAATTTACCTGTTCATGGAGGTATTGATCG...AGGAGGTGGGAGTGGGTGGGTAGGTGCCGGCACAGCCTCATAGAAACAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACCCTCACATTTTCCTACACTGGGGCATCGAGTCTTCACAGGTCCAAGGGCAGCCAGCACTACATaGTCTGCTGTGTCCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SSPSHFPTLGHRVFTGPRAASTT*SAVSQK Trigger: TTTCTGGGACACAGCAGACCATGTAGTGCTGGCTGC...CCTTGGACCTGTGAAGACTCGATGCCCCAGTGTAGGAAAATGTGAGGGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCTGTTTCTATGAGGCTGTGCCGGCACCTACCCACCCACTCCCACCTCCTTCTCCACTTATAGTATaGATAGCTACAAGATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SPCFYEAVPAPTHPLPPPSPLIV*IATRCA Trigger: AGCACATCTTGTAGCTATTCATACTATAAGTGGAGA...AGGAGGTGGGAGTGGGTGGGTAGGTGCCGGCACAGCCTCATAGAAACAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACCCTCACATTTTCCTACACTGGGGCATCGAGTCTTCACAGGTCCAAGGTGTGAATTCCTTGGTTaGTGGTTTAGACCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSPSHFPTLGHRVFTGPRCEFLG*WFRPWE Trigger: CTCCCAGGGTCTAAACCACCAACCAAGGAATTCACA...CCTTGGACCTGTGAAGACTCGATGCCCCAGTGTAGGAAAATGTGAGGGTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATGCCTCAAGAGAGTGCTaGGGAGCTGTGGTACCTGAT | + |
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Preference number: 2 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDASREC*GAVVPD Trigger: ATCAGGTACCACAGCTCCCCAGCACTCTCTTGAGGC...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCTCCCTAGCTCCATGCTaGAGTTCTATCTATACCCCG | + |
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Preference number: 2 (lower is better) Translates to: RHLAVLASSTVVPSSFTSSLAPC*SSIYTP Trigger: CGGGGTATAGATAGAACTTCAGCATGGAGCTAGGGA...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCTGCAGAGAAGTCCTCTaGTTTACTCTTTGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RHLAVLASSTVVPSSFTSCREVL*FTLWLP Trigger: TGGGAGCCAAAGAGTAAATCAGAGGACTTCTCTGCA...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATAGAAGGGCAGAAACATaGAAGGGCAGTAAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDRRAET*KGSKVS Trigger: GGAGACCTTACTGCCCTTCCATGTTTCTGCCCTTCT...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | TCCTCACCCTCACATTTTCCTACACTGGGGCATCGAGTCTTCACAGGTCCAAGGTGCCTAGACAATCTTTaGTCTATAAAGGGATTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SSPSHFPTLGHRVFTGPRCLDNL*SIKGFC Trigger: GCAAAATCCCTTTATAGATCAAAGATTGTCTAGGCA...CCTTGGACCTGTGAAGACTCGATGCCCCAGTGTAGGAAAATGTGAGGGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR GCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCGGATTTGGCTTAAACTaGAGACCAGAGGGAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: RHLAVLASSTVVPSSFTSGFGLN*RPEGNR Trigger: TCTGTTTCCCTCTGGTCTGCAGTTTAAGCCAAATCC...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | AACTGCCACTGCCTTTTGAATTTTCAGAGAGTACAGCATATGTCTTaGAGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NCHCLLNFQRVQHMS*RHLAVLASSTVVPS Trigger: TGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCTCAAAGACATATGCTGTACTCTCTGAAAATTCAAAAGGCAGTGGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | TTATCACCTTTCCTGATTCCTCCCCCTAGAAACCCAATATCCTATCCCCCTCCCCATGATATACACTCTTaGGGAATTCAGGACAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSPFLIPPPRNPISYPPPHDIHS*GIQDKG Trigger: ACCTTTGTCCTGAATTCCTCAAGAGTGTATATCATG...GGGAGGGGGATAGGATATTGGGTTTCTAGGGGGAGGAATCAGGAAAGGTGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCAGTCCTTTCTCTAACTCCTCCATTGGAGAACCCATGATCAGTTCTGTCAGACATCTAGATTGTTaGAGCCAGCACTACATGGTC | + |
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Preference number: 2 (lower is better) Translates to: SFSPFSNSSIGEPMISSVRHLDC*SQHYMV Trigger: GACCATGTAGTGCTGGCTGCAACAATCTAGATGTCT...GACAGAACTGATCATGGGTTCTCCAATGGAGGAGTTAGAGAAAGGACTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATATGCGGGTGGTGGTGGTaGTGCACGGCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSDIPMKNKAPFSIHLCICGWWW*CTALIP Trigger: TGGGATTAAAGCCGTGCACCACCACCACCACCCGCA...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | CAGAGAAGTCCTCTGATTTACTCTTTGGCTCCCAAGCACATCAACTaGTTCTCTTCAAGACCCCACAAAGGTACTAACACTATGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: QRSPLIYSLAPKHIN*FSSRPHKGTNTMMA Trigger: AGCCATCATAGTGTTAGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGCCAAAGAGTAAATCAGAGGACTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | TCACAGAACAGAGATGCAAGTCGTCCCTTTCCCACCACTCTGAACTaGGATTTACTATTGCTTAAACACTCCATGCATCAAGGAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: SQNRDASRPFPTTLN*DLLLLKHSMHQGRI Trigger: AATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTAAATCCAAGTTCAGAGTGGTGGGAAAGGGACGACTTGCATCTCTGTTCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | GAAAGCTTTGTTTCTAAAACCAGGAAGCCCTTCTCAGGCTACAATTaGCTGCTTGTAGATACACAGAATGACTTTCATGCCTGCCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: ESFVSKTRKPFSGYN*LLVDTQNDFHACLD Trigger: GTCTAGGCAGGCATGAAAGTCATTCTGTGTATCTACAAGCAGCAAATTGTAGCCTGAGAAGGGCTTCCTGGTTTTAGAAACAAAGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAACAGCCTTCTGCAGGTTTCAAGAAAGGGACCTTATGGATCTCAATATAACACACATATGCATGCATaGGCAGGAACTGCTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SNSLLQVSRKGPYGSQYNTHMHA*AGTATE Trigger: CTCTGTAGCAGTTCCTGCGCATGCATGCATATGTGT...GTTATATTGAGATCCATAAGGTCCCTTTCTTGAAACCTGCAGAAGGCTGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATTCTGCAAGTGCAAGGTaGAAAAGTCATAGAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDSASAR*KSHRDE Trigger: TTCATCTCTATGACTTTTCCACCTTGCACTTGCAGA...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR GCA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACATTTGTAGCAGCCTTGTaGAGTACAGGAAGGCAGATT | + |
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Preference number: 2 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTFVAAL*STGRQI Trigger: AATCTGCCTTCCTGTACTGCACAAGGCTGCTACAAA...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTATTATAAATAACAGGTACAGATCCTATGTACAGGATGAGACTGCAGTGCAGGAAGGCAGATTCTaGACCTCCACTAACAATGAC | + |
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Preference number: 2 (lower is better) Translates to: LVIINNRYRSYVQDETAVQEGRF*TSTNND Trigger: GTCATTGTTAGTGGAGGTTCAGAATCTGCCTTCCTG...CACTGCAGTCTCATCCTGTACATAGGATCTGTACCTGTTATTTATAATAACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGGAGTTTATCTGCATCACATGATATACACTCTTGAGGAATTCAGGACAAAGGCTCTAACAGCCTTCTaGAGGTTTCAAGAAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: FGVYLHHMIYTLEEFRTKALTAF*RFQERD Trigger: GTCCCTTTCTTGAAACCTGCAGAAGGCTGTTAGAGC...CTTTGTCCTGAATTCCTCAAGAGTGTATATCATGTGATGCAGATAAACTCCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAACTGCCACTGCCTTTTaGATTTTCAGAGAGTACAGC | + |
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Preference number: 2 (lower is better) Translates to: FSDIPMKNKAPFSIHLCITATAF*IFREYS Trigger: GCTGTACTCTCTGAAAATTCAAAAGGCAGTGGCAGT...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR TCA 90 bp | CTCATTAGGCTAAGGTTTCTTGTCTCCACTTATAGTATGAATAGCTACAAGATGAAGCACTTACAGCAGTaGCTGTTTTACACTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LIRLRFLVSTYSMNSYKMKHLQQ*LFYTSG Trigger: CCCACTAGTGTAAAACAGTCACTGCTGTAAGTGCTT...CATCTTGTAGCTATTCATACTATAAGTGGAGACAAGAAACCTTAGCCTAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGAAACTAACCACCACAGACCTGAAGTCAGCTTTATAAAAATACCTTACCTGATGTTTCTGACCTaGCTAAAACACATGCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: EMETNHHRPEVSFIKIPYLMFLT*LKHMLN Trigger: GTTAAGCATGTGTTTTAGTCAGGTCAGAAACATCAG...GTAAGGTATTTTTATAAAGCTGACTTCAGGTCTGTGGTGGTTAGTTTCCATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 90 bp | CTCTATCCATCTGTGCATAAAGCACTATACACCCTCATTCCACAATaGCTATCTCATTCACCAGATTTTAACATCCAGAAAATAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: LYPSVHKALYTLIPQ*LSHSPDFNIQKIAI Trigger: GATTGCTATTTTCTGGATGTTAAAATCTGGTGAATGAGATAGCAATTGTGGAATGAGGGTGTATAGTGCTTTATGCACAGATGGATAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATACCCTCATTCCACAATTaGTATCTCATTCACCAGATT | + |
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Preference number: 2 (lower is better) Translates to: FSDIPMKNKAPFSIHLCIPSFHN*YLIHQI Trigger: AATCTGGTGAATGAGATAGCAATTGTGGAATGAGGG...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGAAACTAACCACCACAGACCTGAAGTCAGCTTTATAAAAATACCTTACAAACAACTAAGGATTTaGCTTAAACTGCAGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: EMETNHHRPEVSFIKIPYKQLRI*LKLQTR Trigger: TCTGGTCTGCAGTTTAAGCCAAATCCTTAGTTGTTT...GTAAGGTATTTTTATAAAGCTGACTTCAGGTCTGTGGTGGTTAGTTTCCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAACTTTAAGGATGCTCTaGTTTTGCTGTCACTTTATC | + |
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Preference number: 2 (lower is better) Translates to: FSDIPMKNKAPFSIHLCITLRML*FCCHFI Trigger: GATAAAGTGACAGCAAAACCAGAGCATCCTTAAAGT...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR CAA 90 bp | ATGCGGGTGGTGGTGGTGGTGCACGGCTTTAATCCCAGCCCCTGGGTGGCAGAGAGGTTTGTAGCAGCCTaGTGCAGTACAGGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: MRVVVVVHGFNPSPWVAERFVAA*CSTGRQ Trigger: CTGCCTTCCTGTACTGCACAAGGCTGCTACAAACCT...CTCTGCCACCCAGGGGCTGGGATTAAAGCCGTGCACCACCACCACCACCCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR-3UTR CAA 90 bp | TCCCCCTGTTTCTATGAGGCTGTGCCGGCACCTACCCACCCACTCCCACCTCCTCTCCATGTGAATTCCTaGGTTGGTGGTTTAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: SPCFYEAVPAPTHPLPPPLHVNS*VGGLDP Trigger: AGGGTCTAAACCACCAACCAAGGAATTCACATGGAG...AGGAGGTGGGAGTGGGTGGGTAGGTGCCGGCACAGCCTCATAGAAACAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR GCA 72 bp | AAGGGACTCTTATTGAAGCCCGACAAGGCCATCCTCTaGTACCTATGTGGCTGGAGCCATGGTTCCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: KGLLLKPDKAIL*YLCGWSHGSLH Trigger: ATGGAGGGAACCATGGCTCCAGCCACATAGGTAGCAGAGGATGGCCTTGTCGGGCTTCAATAAGAGTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| 3UTR GCA 72 bp | ATACCCCGGTCTCCACAATTTCTAGCCTCAAGAGAGTaGTGGGGAGCTGTGGTACCTGATGTTTCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPRSPQFLASRE*WGAVVPDVSDL Trigger: CAGGTCAGAAACATCAGGTACCACAGCTCCCCAGCACTCTCTTGAGGCTAGAAATTGTGGAGACCGGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR TCA 72 bp | GTTGAGTCTCCTGCTTTGGGTAGCTGCTCAAAGAACTaGCCTAGCAGGTTTCATGAGACTCCACCTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VESPALGSCSKN*PSRFHETPPWL Trigger: AAGCCAAGGTGGAGTCTCATGAAACCTGCTAGGTCAGTTCTTTGAGCAGCTACCCAAAGCAGGAGACTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | TGTCGATTTGGAGGAGGGTACTTCACAGAACAGAGATaGAAGTCGTCCCTTTCCCACCACTCTGAACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CRFGGGYFTEQR*KSSLSHHSELG Trigger: TCCAAGTTCAGAGTGGTGGGAAAGGGACGACTTGCATCTCTGTTCTGTGAAGTACCCTCCTCCAAATCGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | GTTCCCTCAAGTTTTACATCCAGTAAGGGTAATCCATaGAGATCACTGCTGCCGGCTCTTCTCACTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPSSFTSSKGNP*RSLLPALLTTE Trigger: CTCTGTAGTGAGAAGAGCCGGCAGCAGTGATCTGCATGGATTACCCTTACTGGATGTAAAACTTGAGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | AGCAATCTTGGAGAAGTAGCAAAGTCACTAAGTAAATaGACGAGCCTGACCAGGGCAACTGCAGTGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SNLGEVAKSLSK*TSLTRATAVSS Trigger: TGAGCTCACTGCAGTTGCCCTGGTCAGGCTCGTGCATTTACTTAGTGACTTTGCTACTTCTCCAAGATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | AGAAAGGCCATCCCTTACTCTAGACATCTAGATTGTTaGAGCCAGCACTACATGGTCTGCTGTGTCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKAIPYSRHLDC*SQHYMVCCVPE Trigger: TTCTGGGACACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGGGATGGCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR CCA 72 bp | ACGACGGCAAAGACTTCCTGCACTTTAAGGATGCTCTaGTTTTGCTGTCACTTTATCAAGCAGCAGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTAKTSCTLRML*FCCHFIKQQPH Trigger: GTGAGGCTGCTGCTTGATAAAGTGACAGCAAAACCAGAGCATCCTTAAAGTGCAGGAAGTCTTTGCCGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | CAGATAGGACAATGGGCTGTGGTGTTCAGAAACCCTTaGATTAACCTTGGGCACACTGCATGGATTTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: QIGQWAVVFRNP*INLGHTAWILP Trigger: TGGTAAAATCCATGCAGTGTGCCCAAGGTTAATGCAAGGGTTTCTGAACACCACAGCCCATTGTCCTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | AGACATCTAGATTGTTGCAGCCAGCACTACATGGTCTaGTGTGTCCCAGAAAGAGTCTTAGGTTTGGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RHLDCCSQHYMV*CVPERVLGLEF Trigger: AAACTCCAAACCTAAGACTCTTTCTGGGACACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTTACTCTAGACATCTAGATTGTTGCAGCCAGCACTACATGGTCTGCTGTTTCTCAGGCTACAATTaGCTGCTTGTAGATACACAG | + |
|
Preference number: 3 (lower is better) Translates to: IPYSRHLDCCSQHYMVCCFSGYN*LLVDTQ Trigger: CTGTGTATCTACAAGCAGCAAATTGTAGCCTGAGAA...ACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR TCA 72 bp | GAATTCCTTGGTTGGTGGTTTAGACCCTGGGAGCTCTaGTTGGTTAATAATGTTGTTCTTCCTATGGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: EFLGWWFRPWEL*LVNNVVLPMGL Trigger: CAACCCCATAGGAAGAACAACATTATTAACCAATCAGAGCTCCCAGGGTCTAAACCACCAACCAAGGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGACCTCTGATTTACTCTTaGGCTCCCAAGCACATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGPLIYS*APKHIN Trigger: GTTGATGTGCTTGGGAGCCAAAGAGTAAATCAGAGG...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR TCA 72 bp | AGTGGCTACAGGTCATTATATAAGCACTTACAGCAGTaGCTGTTTTACACTAGTGGGCCACAACTCTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGYRSLYKHLQQ*LFYTSGPQLFW Trigger: CCAAAAGAGTTGTGGCCCACTAGTGTAAAACAGTCACTGCTGTAAGTGCTTATATAATGACCTGTAGCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR GCA 72 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTaGATAAAGCACTATACACCCTCATTCCACAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: PMKNKAPFSIHL*IKHYTPSFHNC Trigger: GCAATTGTGGAATGAGGGTGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACATTCCAGAGAGGTTTCTaGAGATGGAAACTAACCACC | + |
|
Preference number: 3 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTFQRGF*RWKLTT Trigger: GGTGGTTAGTTTCCATCTCAAGAAACCTCTCTGGAA...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | CTTGTCTCCACTTATAGTATGAATAGCTACAAGATGTaGTCTAACAGCCTTCTGCAGGTTTCAAGAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVSTYSMNSYKM*SNSLLQVSRKG Trigger: TCCCTTTCTTGAAACCTGCAGAAGGCTGTTAGAGCACATCTTGTAGCTATTCATACTATAAGTGGAGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACAAACTGCCACTGCCTTTaGAATTTTCAGAGAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTNCHCL*NFQRVQ Trigger: CTGTACTCTCTGAAAATTCAAAAGGCAGTGGCAGTT...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR-3UTR CAA 90 bp | GCATGCATGCGCAGGAACTGCTACAGAGTTTATCTTAAGTCTACTCTTATTAGCTGCTCAAAGAAAGCTTaGTTTCTAAAACCAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ACMRRNCYRVYLKSTLISCSKKA*FLKPGS Trigger: GCTTCCTGGTTTTAGAAACAAAGCTTTCTTTGAGCA...GCTAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATGGAAACTAACCACCACAGACCTGAAGTCAGCTTTATAAAAATACCTTACGTACAGCATATGTCTTaGAGACACTTGGCAGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EMETNHHRPEVSFIKIPYVQHMS*RHLAVL Trigger: TAAGACTGCCAAGTGTCTCAAAGACATATGCTGTAC...GTAAGGTATTTTTATAAAGCTGACTTCAGGTCTGTGGTGGTTAGTTTCCATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR GCA 72 bp | ATCACAGGAAACACATATGCATGCATGCGCAGGAACTaGTACAGAGTTTATCTTAAGTCTACTCTTATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ITGNTYACMRRN*YRVYLKSTLIS Trigger: GCTAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGCATATGTGTTTCCTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR TCA 72 bp | GTTTGGAGTTTATCTGCATCACATGATATACACTCTTaGGGAATTCAGGACAAAGGTTATGATTCCTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VWSLSASHDIHS*GIQDKGYDSFH Trigger: GTGAAAGGAATCATAACCTTTGTCCTGAATTCCTCAAGAGTGTATATCATGTGATGCAGATAAACTCCAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR GCA 72 bp | CTGTGCATAAAGCACTATACACCCTCATTCCACAATTaGTATCTCATTCACCAGATTTTAACATCCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCIKHYTPSFHN*YLIHQILTSRK Trigger: TTTTCTGGATGTTAAAATCTGGTGAATGAGATAGCAATTGTGGAATGAGGGTGTATAGTGCTTTATGCACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | ATGCGGGTGGTGGTGGTGGTGCACGGCTTTAATCCCAGCCCCTGGGTGGCAGAGAACCTGGCTCTTGAATaGCATCCACCTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MRVVVVVHGFNPSPWVAENLALE*HPPFPH Trigger: GTGTGGGAAAGGTGGATGTCATTCAAGAGCCAGGTT...CTCTGCCACCCAGGGGCTGGGATTAAAGCCGTGCACCACCACCACCACCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TTATCACCTTTCCTGATTCCTCCCCCTAGAAACCCAATATCCTATCCCCCTCCCGAGGCGGTCATGGGCTaGACACGGCTCTCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFLIPPPRNPISYPPPEAVMG*TRLSSA Trigger: GGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTC...GGGAGGGGGATAGGATATTGGGTTTCTAGGGGGAGGAATCAGGAAAGGTGATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCACCCTCACATTTTCCTACACTGGGGCATCGAGTCTTCACAGGTCCAAGGGGGACTTCCAGCCAGTaGGAGGCTCAACTGATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSHFPTLGHRVFTGPRGTSSQ*EAQLIA Trigger: GGCAATCAGTTGAGCCTCTCACTGGCTGGAAGTCCC...CCTTGGACCTGTGAAGACTCGATGCCCCAGTGTAGGAAAATGTGAGGGTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATGAGGCGGTCATGGGCTaGACACGGCTCTCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDEAVMG*TRLSSA Trigger: GGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTC...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | TGTGGCTGGAGCCATGGTTCCCTCCATGTGAATTCCTaGGTTGGTGGTTTAGACCCTGGGAGCTCTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGWSHGSLHVNS*VGGLDPGSSDW Trigger: CCAATCAGAGCTCCCAGGGTCTAAACCACCAACCAAGGAATTCACATGGAGGGAACCATGGCTCCAGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR CAA 72 bp | GGGGCATCGAGTCTTCACAGGTCCAAGGGACTCTTATaGAAGCCCGACAAGGCCATCCTCTGCTACCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GASSLHRSKGLL*KPDKAILCYLC Trigger: ACATAGGTAGCAGAGGATGGCCTTGTCGGGCTTCAATAAGAGTCCCTTGGACCTGTGAAGACTCGATGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTGTTTCTATGAGGCTGTGCCGGCACCTACCCACCCACTCCCACCTCCTTTTCCCACACTGATCTaGAGTGTTTCTCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPCFYEAVPAPTHPLPPPFPTLI*SVSPFF Trigger: AAAGAATGGAGAAACACTTCAGATCAGTGTGGGAAA...AGGAGGTGGGAGTGGGTGGGTAGGTGCCGGCACAGCCTCATAGAAACAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCAGCTGCTCAGCTCCTTaGGCCTCTCCAGTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLAVLASSTVVPSSFTSSCSAP*ASPVLC Trigger: GCAGAGTACTGGAGAGGCTCAAGGAGCTGAGCAGCT...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATTCACCAGCGTCCAGTTaGAGGCGGTCATGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDSPASS*RRSWAA Trigger: TGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGA...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCGCCTCTCCAGTACTCTaGTCCTGCTCACAGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLAVLASSTVVPSSFTSASPVL*SCSQRS Trigger: TGAACGCTGTGAGCAGGAGCAGAGTACTGGAGAGGC...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTGGCTCCCAAGCACATCAACTTGTTCTCTTCAAGACCCCACAAAGGTACTGTCCTGAGTGTCAGCTaGGTGAGCTCCGTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLAPKHINLFSSRPHKGTVLSVS*VSSVLL Trigger: AAGGAGGACGGAGCTCACCCAGCTGACACTCAGGAC...AGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGCCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATATGCTGGGAGAGTGGTaGCAAAGAAGCGGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDMLGEW*QRSGHS Trigger: TGAGTGGCCGCTTCTTTGTCACCACTCTCCCAGCAT...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGCCATCCCTTACTCTAGACATCTAGATTGTTGCAGCCAGCACTACATGATGCTGGGAGAGTGGTaGCAAAGAAGCGGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKAIPYSRHLDCCSQHYMMLGEW*QRSGHS Trigger: TGAGTGGCCGCTTCTTTGTCACCACTCTCCCAGCAT...CATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGGGATGGCCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR CCA 90 bp | GCATGCATGCGCAGGAACTGCTACAGAGTTTATCTTAAGTCTACTCTTATTAGCTCACCAGCGTCCAGTTaGAGGCGGTCATGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACMRRNCYRVYLKSTLISSPASS*RRSWAA Trigger: TGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGA...GCTAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR CCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCTCAGAATCAGTCTGCTaGCAGGATGGACACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHLAVLASSTVVPSSFTSSESVC*QDGHHG Trigger: TCCATGGTGTCCATCCTGCCAGCAGACTGATTCTGA...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACAGGGACTTCCAGCCAGTaGGAGGCTCAACTGATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTGTSSQ*EAQLIA Trigger: GGCAATCAGTTGAGCCTCTCACTGGCTGGAAGTCCC...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAGCACATCAACTTGTTCTCTTCAAGACCCCACAAAGGTACTAACACTTTCCAAGGGTCACTGTaGAATAGTTGTGAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: APKHINLFSSRPHKGTNTFQGSL*NSCEGA Trigger: GGCACCTTCACAACTATTTCACAGTGACCCTTGGAA...AGTGTTAGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | AGACACTTGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCAAGTTTTACATCCAACGTAAGAACACCATaGAGGAATTCCAAGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLAVLASSTVVPSSFTSNVRTP*RNSKGH Trigger: GTGACCCTTGGAATTCCTGCATGGTGTTCTTACGTT...GGATGTAAAACTTGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | GCTCCCAAGCACATCAACTTGTTCTCTTCAAGACCCCACAAAGGTACTAACACTAGTCTGCTGGCAGGATaGACACCATGGAGCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: APKHINLFSSRPHKGTNTSLLAG*TPWSIK Trigger: TTTTATGCTCCATGGTGTCCATCCTGCCAGCAGACT...AGTGTTAGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATATCTTCATAGATTCCTaGACCACGGTAACGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDIFIDS*TTVTAE Trigger: TTCCGCCGTTACCGTGGTCCAGGAATCTATGAAGAT...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAGTCCTTTCTCTAACTCCTCCATTGGAGAACCCATGATCAGTTCTGTCATCTTCATAGATTCCTaGACCACGGTAACGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSPFSNSSIGEPMISSVIFIDS*TTVTAE Trigger: TTCCGCCGTTACCGTGGTCCAGGAATCTATGAAGAT...GACAGAACTGATCATGGGTTCTCCAATGGAGGAGTTAGAGAAAGGACTGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACATTCTCTCCTCAGCCATaGTGCCTGCCAAGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTFSPQP*CLPSCP Trigger: AGGACAACTTGGCAGGCATCATGGCTGAGGAGAGAA...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGACCAGTACTCTGCTCCTaGTCACAGCGTTCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGPVLCS*SQRSEE Trigger: TTCCTCTGAACGCTGTGAGCAGGAGCAGAGTACTGG...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGACTCAGCCATGATGCCTaGCAAGTTGTCCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGLSHDA*QVVLFL Trigger: GAGGAAGAGGACAACTTGGCAGGCATCATGGCTGAG...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | GCATGCATGCGCAGGAACTGCTACAGAGTTTATCTTAAGTCTACTCTTATTAGCTCAGAATCAGTCTGCTaGCAGGATGGACACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACMRRNCYRVYLKSTLISSESVC*QDGHHG Trigger: TCCATGGTGTCCATCCTGCCAGCAGACTGATTCTGA...GCTAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGAAACTAACCACCACAGACCTGAAGTCAGCTTTATAAAAATACCTTACAGCTCCGTCCTCCTTTaGGGACACACTACCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EMETNHHRPEVSFIKIPYSSVLL*GHTTLL Trigger: AAGGAGGGTAGTGTGTCCCCAAAGGAGGACGGAGCT...GTAAGGTATTTTTATAAAGCTGACTTCAGGTCTGTGGTGGTTAGTTTCCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | CCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAAAGCACTATACACTCAAACCTGGCTCTTaGATGACATCCACCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PMKNKAPFSIHLCIKHYTLKPGS*MTSTFP Trigger: GGGAAAGGTGGATGTCATTCAAGAGCCAGGTTTGAG...TGTATAGTGCTTTATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | GGTTTCATGAGACTCCACCTTGGCTTCTGTCAGAAGCTACAATCTCACAAGGATATCCCATCTTTTGCATaGAAAAATGCTGGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFMRLHLGFCQKLQSHKDIPSFA*KNAGRV Trigger: CACTCTCCCAGCATTTTTTCATGCAAAAGATGGGAT...ATCCTTGTGAGATTGTAGCTTCTGACAGAAGCCAAGGTGGAGTCTCATGAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR TCA 90 bp | ATCCCTTACTCTAGACATCTAGATTGTTGCAGCCAGCACTACATGGTCTGCTGTATCCCATCTTTTGCATaGAAAAATGCTGGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPYSRHLDCCSQHYMVCCIPSFA*KNAGRV Trigger: CACTCTCCCAGCATTTTTTCATGCAAAAGATGGGAT...ACAGCAGACCATGTAGTGCTGGCTGCAACAATCTAGATGTCTAGAGTAAGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR GCA 90 bp | GCATGCATGCGCAGGAACTGCTACAGAGTTTATCTTAAGTCTACTCTTATTAGCCATTCAGAATCAGTCTaGTGGCAGGATGGACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACMRRNCYRVYLKSTLISHSESV*WQDGHH Trigger: ATGGTGTCCATCCTGCCAGCAGACTGATTCTGAATG...GCTAATAAGAGTAGACTTAAGATAAACTCTGTAGCAGTTCCTGCGCATGCATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR CAA 72 bp | CCTCTGATTTACTCTTTGGCTCCCAAGCACATCAACTaGTTCTCTTCAAGACCCCACAAAGGTACTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PLIYSLAPKHIN*FSSRPHKGTNT Trigger: AGTGTTAGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGCCAAAGAGTAAATCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | AATTTTCAGAGAGTACAGCATATGTCTTTGAGACACTaGGCAGTCTTAGCCTCCTCAACTGTGGTTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFQRVQHMSLRH*AVLASSTVVPS Trigger: TGAGGGAACCACAGTTGAGGAGGCTAAGACTGCCAAGTGTCTCAAAGACATATGCTGTACTCTCTGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGACATTCAGAATCAGTCTaGTGGCAGGATGGACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGHSESV*WQDGHH Trigger: ATGGTGTCCATCCTGCCAGCAGACTGATTCTGAATG...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| 3UTR CAA 72 bp | TGCCTTTTGAATTTTCAGAGAGTACAGCATATGTCTTaGAGACACTTGGCAGTCTTAGCCTCCTCAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLNFQRVQHMS*RHLAVLASSTV Trigger: CACAGTTGAGGAGGCTAAGACTGCCAAGTGTCTCAAAGACATATGCTGTACTCTCTGAAAATTCAAAAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | AATAAAATCTTTCTTTGTGCAAGGTTTGTAGCAGCCTaGTGCAGTACAGGAAGGCAGATTCTGAACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKIFLCARFVAA*CSTGRQILNLH Trigger: GTGGAGGTTCAGAATCTGCCTTCCTGTACTGCACAAGGCTGCTACAAACCTTGCACAAAGAAAGATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | CGTCCCTTTCCCACCACTCTGAACTTGGATTTACTATaGCTTAAACACTCCATGCATCAAGGAAGGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: RPFPTTLNLDLL*LKHSMHQGRIT Trigger: TGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTAAATCCAAGTTCAGAGTGGTGGGAAAGGGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | AGAGATGCAAGTCGTCCCTTTCCCACCACTCTGAACTaGGATTTACTATTGCTTAAACACTCCATGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDASRPFPTTLN*DLLLLKHSMHQ Trigger: TTGATGCATGGAGTGTTTAAGCAATAGTAAATCCAAGTTCAGAGTGGTGGGAAAGGGACGACTTGCATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | GTTTCTAAAACCAGGAAGCCCTTCTCAGGCTACAATTaGCTGCTTGTAGATACACAGAATGACTTTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSKTRKPFSGYN*LLVDTQNDFHA Trigger: GGCATGAAAGTCATTCTGTGTATCTACAAGCAGCAAATTGTAGCCTGAGAAGGGCTTCCTGGTTTTAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGAGTTTATCTGCATCACATGATATACACTCTTGAGGAATTCAGGACAAAGAACCTGGCTCTTGAATaGCATCCACCTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FGVYLHHMIYTLEEFRTKNLALE*HPPFPH Trigger: GTGTGGGAAAGGTGGATGTCATTCAAGAGCCAGGTT...CTTTGTCCTGAATTCCTCAAGAGTGTATATCATGTGATGCAGATAAACTCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCAGTCCTTTCTCTAACTCCTCCATTGGAGAACCCATGATCAGTTCTGTCAGAGGCTCAACTGATTaGCATTTCTTCTCTAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSPFSNSSIGEPMISSVRGSTD*HFFSNM Trigger: CATATTAGAGAAGAAATGGCAATCAGTTGAGCCTCT...GACAGAACTGATCATGGGTTCTCCAATGGAGGAGTTAGAGAAAGGACTGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS-3UTR TCA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGATTTCCCACACTGATCTaGAGTGTTTCTCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGFPTLI*SVSPFF Trigger: AAAGAATGGAGAAACACTTCAGATCAGTGTGGGAAA...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTTATTATAAATAACAGGTACAGATCCTATGTACAGGATGAGACTGCAGTGTTCAGAGGAAGCTCTTaGAAGAGGCACACAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVIINNRYRSYVQDETAVFRGSS*KRHTET Trigger: TGTTTCTGTGTGCCTCTTCCAAGAGCTTCCTCTGAA...CACTGCAGTCTCATCCTGTACATAGGATCTGTACCTGTTATTTATAATAACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGAAGAGGCTCAACTGATTaGCATTTCTTCTCTAATATG | + |
|
Preference number: 4 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGRGSTD*HFFSNM Trigger: CATATTAGAGAAGAAATGGCAATCAGTTGAGCCTCT...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTTATTATAAATAACAGGTACAGATCCTATGTACAGGATGAGACTGCAGTGGCAGGATGGACACCATaGAGCATAAAATTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVIINNRYRSYVQDETAVAGWTP*SIKFQH Trigger: ATGCTGAAATTTTATGCTCCATGGTGTCCATCCTGC...CACTGCAGTCTCATCCTGTACATAGGATCTGTACCTGTTATTTATAATAACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS-3UTR CCA 90 bp | TTTGGAGTTTATCTGCATCACATGATATACACTCTTGAGGAATTCAGGACAAAGGCAGGATGGACACCATaGAGCATAAAATTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGVYLHHMIYTLEEFRTKAGWTP*SIKFQH Trigger: ATGCTGAAATTTTATGCTCCATGGTGTCCATCCTGC...CTTTGTCCTGAATTCCTCAAGAGTGTATATCATGTGATGCAGATAAACTCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| 3UTR CAA 72 bp | AATAAGGAATCTGGGTTCCTTGATACTGATATTGGATaGAGCAGGGAGAGATTTATAATCACACAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKESGFLDTDIG*SRERFIITQFS Trigger: GGAGAATTGTGTGATTATAAATCTCTCCCTGCTCAATCCAATATCAGTATCAAGGAACCCAGATTCCTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| 3UTR CAA 72 bp | TCTGTGCATAAAGCACTATACACCCTCATTCCACAATaGCTATCTCATTCACCAGATTTTAACATCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVHKALYTLIPQ*LSHSPDFNIQK Trigger: TTTCTGGATGTTAAAATCTGGTGAATGAGATAGCAATTGTGGAATGAGGGTGTATAGTGCTTTATGCACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS-3UTR GCA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATATGTTTCTCCATTCTTTaGAAAAGTCTCCCATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSDIPMKNKAPFSIHLCICFSIL*KSLPFR Trigger: TCTGAATGGGAGACTTTTGCAAAGAATGGAGAAACA...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS GCA 90 bp | GCGGTCATGGGCTGCACACGGCTCTCCTCGGCCGGCAGCGCGGCCTaGTCGAGACCCTCGGCCGCTGCCGCTGCGAGCCAGGCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVMGCTRLSSAGSAA*SRPSAAAAASQAAR Trigger: CCTGGCCGCCTGGCTCGCAGCGGCAGCGGCCGAGGGTCTCGAGCAGGCCGCGCTGCCGGCCGAGGAGAGCCGTGTGCAGCCCATGACCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS GCA 90 bp | GCTCTCCTCGGCCGGCAGCGCGGCCTGCTCGAGACCCTCGGCCGCTaGCGCTGCGAGCCAGGCGGCCAGGAGTACCGGGACGCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLGRQRGLLETLGR*RCEPGGQEYRDAEA Trigger: GGCTTCTGCGTCCCGGTACTCCTGGCCGCCTGGCTCGCAGCGGCAGCGGCCGAGGGTCTCGAGCAGGCCGCGCTGCCGGCCGAGGAGAGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS GCA 90 bp | CACTCGCCCTCCATCACCAGCGTCCAGTTGGAGGCGGTCATGGGCTaGACACGGCTCTCCTCGGCCGGCAGCGCGGCCTGCTCGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPSITSVQLEAVMG*TRLSSAGSAACSRP Trigger: GGGTCTCGAGCAGGCCGCGCTGCCGGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGATGGAGGGCGAGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS CCA 90 bp | GCATCCACTCGCCCTCCATCACCAGCGTCCAGTTGGAGGCGGTCATaGGCTGCACACGGCTCTCCTCGGCCGGCAGCGCGGCCTGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASTRPPSPASSWRRS*AAHGSPRPAARPAR Trigger: TCGAGCAGGCCGCGCTGCCGGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGATGGAGGGCGAGTGGATGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS CCA 90 bp | CATAAAATTTCAGCATCCACTCGCCCTCCATCACCAGCGTCCAGTTaGAGGCGGTCATGGGCTGCACACGGCTCTCCTCGGCCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HKISASTRPPSPASS*RRSWAAHGSPRPAA Trigger: CGCTGCCGGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGATGGAGGGCGAGTGGATGCTGAAATTTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS CCA 90 bp | CTTGCGCTGCCTCAGGGCGTCTTCCACCACGTCCTGAGTGTCAGCTaGGTGAGCTCCGTCCTCCTTTGGGGACACACTACCCTCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LALPQGVFHHVLSVS*VSSVLLWGHTTLLH Trigger: GTGAAGGAGGGTAGTGTGTCCCCAAAGGAGGACGGAGCTCACCCAGCTGACACTCAGGACGTGGTGGAAGACGCCCTGAGGCAGCGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS GCA 90 bp | GTGAGCTCCGTCCTCCTTTGGGGACACACTACCCTCCTTCACAACTaGTCGCTCGTTGGTGTCACTTCTCTCCTCAGCCATGATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSVLLWGHTTLLHN*SLVGVTSLLSHDAC Trigger: GCAGGCATCATGGCTGAGGAGAGAAGTGACACCAACGAGCGAGCAGTTGTGAAGGAGGGTAGTGTGTCCCCAAAGGAGGACGGAGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS-3UTR CAA 90 bp | TCCCCCTGTTTCTATGAGGCTGTGCCGGCACCTACCCACCCACTCCCACCTCCTGTACTCACCCAAATCTaGCCAGAGATGCTAAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPCFYEAVPAPTHPLPPPVLTQI*PEMLKR Trigger: TCTTTTTAGCATCTCTGGCAAGATTTGGGTGAGTAC...AGGAGGTGGGAGTGGGTGGGTAGGTGCCGGCACAGCCTCATAGAAACAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
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| CDS TCA 90 bp | GAGTCATCCTTTTCTTCCTCTGCATCCTGTAGCTGCTCAGCTCCTTaGGCCTCTCCAGTACTCTGCTCCTGCTCACAGCGTTCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ESSFSSSASCSCSAP*ASPVLCSCSQRSEE Trigger: TTCCTCTGAACGCTGTGAGCAGGAGCAGAGTACTGGAGAGGCTCAAGGAGCTGAGCAGCTACAGGATGCAGAGGAAGAAAAGGATGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS-3UTR CAA 90 bp | TCTTTGGCTCCCAAGCACATCAACTTGTTCTCTTCAAGACCCCACAAAGGTACTGAGCTCCGTCCTCCTTaGGGGACACACTACCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLAPKHINLFSSRPHKGTELRPP*GTHYPP Trigger: AGGAGGGTAGTGTGTCCCCAAAGGAGGACGGAGCTC...AGTACCTTTGTGGGGTCTTGAAGAGAACAAGTTGATGTGCTTGGGAGCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS-3UTR CAA 90 bp | TACTATTGCTTAAACACTCCATGCATCAAGGAAGGATTACAAGGGAAGGAAGGAATCACCAGCGTCCAGTaGGAGGCGGTCATGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YYCLNTPCIKEGLQGKEGITSVQ*EAVMGC Trigger: GCAGCCCATGACCGCCTCCAACTGGACGCTGGTGAT...TCCTTCCTTCCCTTGTAATCCTTCCTTGATGCATGGAGTGTTTAAGCAATAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS-3UTR CAA 90 bp | TTTGGAGTTTATCTGCATCACATGATATACACTCTTGAGGAATTCAGGACAAAGATCACCAGCGTCCAGTaGGAGGCGGTCATGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FGVYLHHMIYTLEEFRTKITSVQ*EAVMGC Trigger: GCAGCCCATGACCGCCTCCAACTGGACGCTGGTGAT...CTTTGTCCTGAATTCCTCAAGAGTGTATATCATGTGATGCAGATAAACTCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110120.2 |
||
| CDS TCA 90 bp | CAGCCATTCCAGACATCGTTAGAGAGGCTGGGGACTTCCAGCCAGTaGGAGGCTCAACTGATTGCCATTTCTTCTCTAATATGTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPFQTSLERLGTSSQ*EAQLIAISSLICNS Trigger: AGAATTACATATTAGAGAAGAAATGGCAATCAGTTGAGCCTCTCACTGGCTGGAAGTCCCCAGCCTCTCTAACGATGTCTGGAATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038228.11 ENSMUST00000110120.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGATATTCCAATGAAGAACAAGGCACCTTTCTCTATCCATCTGTGCATAGTTCAGAGGAAGCTCTaGGAAGAGGCACACAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSDIPMKNKAPFSIHLCIVQRKL*EEAHRN Trigger: GTTTCTGTGTGCCTCTTCCAAGAGCTTCCTCTGAAC...TATGCACAGATGGATAGAGAAAGGTGCCTTGTTCTTCATTGGAATATCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS GCA 72 bp | GGCTGCACACGGCTCTCCTCGGCCGGCAGCGCGGCCTaGTCGAGACCCTCGGCCGCTGCCGCTGCGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCTRLSSAGSAA*SRPSAAAAASQ Trigger: CTGGCTCGCAGCGGCAGCGGCCGAGGGTCTCGAGCAGGCCGCGCTGCCGGCCGAGGAGAGCCGTGTGCAGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS GCA 72 bp | TCCATCACCAGCGTCCAGTTGGAGGCGGTCATGGGCTaGACACGGCTCTCCTCGGCCGGCAGCGCGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SITSVQLEAVMG*TRLSSAGSAAC Trigger: GCAGGCCGCGCTGCCGGCCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGATGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
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| CDS CCA 72 bp | TCAGCATCCACTCGCCCTCCATCACCAGCGTCCAGTTaGAGGCGGTCATGGGCTGCACACGGCTCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASTRPPSPASS*RRSWAAHGSPR Trigger: CCGAGGAGAGCCGTGTGCAGCCCATGACCGCCTCCAACTGGACGCTGGTGATGGAGGGCGAGTGGATGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038228.11 ENSMUST00000110119.2 ENSMUST00000110120.2 |
||
| CDS CCA 72 bp | CCTCAGGGCGTCTTCCACCACGTCCTGAGTGTCAGCTaGGTGAGCTCCGTCCTCCTTTGGGGACACACTACC | + |
|
Preference number: 6 (lower is better) Translates to: PQGVFHHVLSVS*VSSVLLWGHTT Trigger: GGTAGTGTGTCCCCAAAGGAGGACGGAGCTCACCCAGCTGACACTCAGGACGTGGTGGAAGACGCCCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS CAA 72 bp | CGTCCTGAGTGTCAGCTGGGTGAGCTCCGTCCTCCTTaGGGGACACACTACCCTCCTTCACAACTGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPECQLGELRPP*GTHYPPSQLLA Trigger: AGCGAGCAGTTGTGAAGGAGGGTAGTGTGTCCCCAAAGGAGGACGGAGCTCACCCAGCTGACACTCAGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS CAA 72 bp | GGGGACACACTACCCTCCTTCACAACTGCTCGCTCGTaGGTGTCACTTCTCTCCTCAGCCATGATGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GDTLPSFTTARS*VSLLSSAMMPA Trigger: GGCAGGCATCATGGCTGAGGAGAGAAGTGACACCAACGAGCGAGCAGTTGTGAAGGAGGGTAGTGTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS CAA 90 bp | TCCTCCTTTGGGGACACACTACCCTCCTTCACAACTGCTCGCTCGTaGGTGTCACTTCTCTCCTCAGCCATGATGCCTGCCAAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFGDTLPSFTTARS*VSLLSSAMMPAKLS Trigger: GGACAACTTGGCAGGCATCATGGCTGAGGAGAGAAGTGACACCAACGAGCGAGCAGTTGTGAAGGAGGGTAGTGTGTCCCCAAAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS GCA 72 bp | GTCCTCCTTTGGGGACACACTACCCTCCTTCACAACTaGTCGCTCGTTGGTGTCACTTCTCTCCTCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLLWGHTTLLHN*SLVGVTSLLSH Trigger: ATGGCTGAGGAGAGAAGTGACACCAACGAGCGAGCAGTTGTGAAGGAGGGTAGTGTGTCCCCAAAGGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS TCA 72 bp | TTTTCTTCCTCTGCATCCTGTAGCTGCTCAGCTCCTTaGGCCTCTCCAGTACTCTGCTCCTGCTCACAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSSSASCSCSAP*ASPVLCSCSQR Trigger: ACGCTGTGAGCAGGAGCAGAGTACTGGAGAGGCTCAAGGAGCTGAGCAGCTACAGGATGCAGAGGAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS CAA 90 bp | CCTCTCCAGTACTCTGCTCCTGCTCACAGCGTTCAGAGGAAGCTCTaGGAAGAGGCACACAGAAACATTCTGAAATCACCACCAGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: PLQYSAPAHSVQRKL*EEAHRNILKSPPGS Trigger: TGATCCTGGTGGTGATTTCAGAATGTTTCTGTGTGCCTCTTCCAAGAGCTTCCTCTGAACGCTGTGAGCAGGAGCAGAGTACTGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS GCA 72 bp | CTCGTTGGTGTCACTTCTCTCCTCAGCCATGATGCCTaGCAAGTTGTCCTCTTCCTCATCTTCTTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVGVTSLLSHDA*QVVLFLIFFSF Trigger: GAAGGAGAAGAAGATGAGGAAGAGGACAACTTGGCAGGCATCATGGCTGAGGAGAGAAGTGACACCAACGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
||
| CDS TCA 72 bp | CAGACATCGTTAGAGAGGCTGGGGACTTCCAGCCAGTaGGAGGCTCAACTGATTGCCATTTCTTCTCTAATA | + |
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Preference number: 6 (lower is better) Translates to: QTSLERLGTSSQ*EAQLIAISSLI Trigger: TATTAGAGAAGAAATGGCAATCAGTTGAGCCTCTCACTGGCTGGAAGTCCCCAGCCTCTCTAACGATGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038228.11 ENSMUST00000110120.2 |
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| CDS CAA 72 bp | TACTCTGCTCCTGCTCACAGCGTTCAGAGGAAGCTCTaGGAAGAGGCACACAGAAACATTCTGAAATCACCA | + |
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Preference number: 6 (lower is better) Translates to: YSAPAHSVQRKL*EEAHRNILKSP Trigger: TGGTGATTTCAGAATGTTTCTGTGTGCCTCTTCCAAGAGCTTCCTCTGAACGCTGTGAGCAGGAGCAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS TCA 72 bp | CGTAAGAACACCATGCAGGAATTCCAAGGGTCACTGTaGAATAGTTGTGAAGGTGCCAAATCTTGCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RKNTMQEFQGSL*NSCEGAKSCQR Trigger: TCTCTGGCAAGATTTGGCACCTTCACAACTATTTCACAGTGACCCTTGGAATTCCTGCATGGTGTTCTTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038228.11 |
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| CDS TCA 72 bp | TGCTCAACATCCTACTTGGCAAATCTTCTACATCCATaGACATTTCTAAGCAAGCAGTTGCTAAGCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSTSYLANLLHP*TFLSKQLLSIP Trigger: GGGAATGCTTAGCAACTGCTTGCTTAGAAATGTTCATGGATGTAGAAGATTTGCCAAGTAGGATGTTGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110119.2 |
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