Pregenerated sensors for TMX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024614Ensembl transcript IDs: ENSMUST00000025515.7, ENSMUST00000235634.2, ENSMUST00000236602.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAAGAAAGTGCTCAGAACTGATGGCCACTGTGACACTGTGGTATaGGGAATGTACTGTAGACTGTTGAGAGGAGGTGTGGACTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: GKKVLRTDGHCDTVV*GMYCRLLRGGVDLG Trigger: ACCTAAGTCCACACCTCCTCTCAACAGTCTACAGTACATTCCTCATACCACAGTGTCACAGTGGCCATCAGTTCTGAGCACTTTCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR GCA 90 bp | TGGATGGGATCTTCTGATGTGTATCACAGGAAAGGGGAAAGAAAGTaGTCAGAACTGATGGCCACTGTGACACTGTGGTATGAGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: WMGSSDVYHRKGERK*SELMATVTLWYEEC Trigger: ACATTCCTCATACCACAGTGTCACAGTGGCCATCAGTTCTGAGCACTTTCTTTCCCCTTTCCTGTGATACACATCAGAAGATCCCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR TCA 90 bp | ATTCTAAAATTCACTCTGCCTTTATTCATGATCTTTGTGGCTTGTTaGAGCTGGTCCACCCTCGCCAGGCTTGGACAAGCTTTGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: ILKFTLPLFMIFVAC*SWSTLARLGQALSF Trigger: GAAACTCAAAGCTTGTCCAAGCCTGGCGAGGGTGGACCAGCTTCAACAAGCCACAAAGATCATGAATAAAGGCAGAGTGAATTTTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CCA 90 bp | CCTCCTTGGGCTGGTACTGTACCATCCAAAATGCTATTAATGAACTaGACCATGTCGCTCGCATCCTTAATATGTCTATCTAGCAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: PPWAGTVPSKMLLMN*TMSLASLICLSSKK Trigger: CTTTTTGCTAGATAGACATATTAAGGATGCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAGTACCAGCCCAAGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| 3UTR TCA 90 bp | GAAACATCATGGGCAATAAAACTGAATAAACAGAAACAACATAAATaGTCGCTTCAGCTCTTCAAGAGACCTTTCCATCACCTTTACTCA | + |
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Preference number: 1 (lower is better) Translates to: ETSWAIKLNKQKQHK*SLQLFKRPFHHLYS Trigger: TGAGTAAAGGTGATGGAAAGGTCTCTTGAAGAGCTGAAGCGATCATTTATGTTGTTTCTGTTTATTCAGTTTTATTGCCCATGATGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR TCA 90 bp | AGCTGGGATGAACAAATGAAGGAAGGCACTGTTAGAGACACATTTTaGTTCTACAATTTAAGCCAGCAATTTAGAGAAATAAAGTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SWDEQMKEGTVRDTF*FYNLSQQFREIKCK Trigger: TTTGCACTTTATTTCTCTAAATTGCTGGCTTAAATTGTAGAATCAAAATGTGTCTCTAACAGTGCCTTCCTTCATTTGTTCATCCCAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 90 bp | TGGTCCACCCTCGCCAGGCTTGGACAAGCTTTGAGTTTCTCTGGGTaGCTTAGCCACATTGAGGCAGAAACTTTCCTAGGAACATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: WSTLARLGQALSFSG*LSHIEAETFLGTSS Trigger: TGAGGATGTTCCTAGGAAAGTTTCTGCCTCAATGTGGCTAAGCAACCCAGAGAAACTCAAAGCTTGTCCAAGCCTGGCGAGGGTGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 90 bp | ACATATTCTAAAATTCACTCTGCCTTTATTCATGATCTTTGTGGCTaGTTGAAGCTGGTCCACCCTCGCCAGGCTTGGACAAGCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: TYSKIHSAFIHDLCG*LKLVHPRQAWTSFE Trigger: CTCAAAGCTTGTCCAAGCCTGGCGAGGGTGGACCAGCTTCAACAAGCCACAAAGATCATGAATAAAGGCAGAGTGAATTTTAGAATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGATTTCAGAACAGAGGTGCTGAGGATGTTGGGCTAAGCATGCATCCTCTGCTCTCCCCTTGTTCATaGAATCTGAATTTAACATGT | + |
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Preference number: 2 (lower is better) Translates to: ERFQNRGAEDVGLSMHPLLSPCS*NLNLTC Trigger: ACATGTTAAATTCAGATTTCATGAACAAGGGGAGAG...CAGAGGATGCATGCTTAGCCCAACATCCTCAGCACCTCTGTTCTGAAATCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR CAA 90 bp | TATTCTAAAATTCACTCTGCCTTTATTCATGATCTTTGTGGCTTGTaGAAGCTGGTCCACCCTCGCCAGGCTTGGACAAGCTTTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: YSKIHSAFIHDLCGL*KLVHPRQAWTSFEF Trigger: AAACTCAAAGCTTGTCCAAGCCTGGCGAGGGTGGACCAGCTTCAACAAGCCACAAAGATCATGAATAAAGGCAGAGTGAATTTTAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTGGCTTGGACAAGCTTTaGGTTTCTCTGGGTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: ELGFISCKKVPALNSHLLGLDKL*VSLGCL Trigger: TAAGCAACCCAGAGAAACTCAAAGCTTGTCCAAGCC...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAATTTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATCACCCTCGCCAGGCTTaGACAAGCTTTGAGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PQIFQLLKILSELTTIVDHPRQA*TSFEFL Trigger: GAGAAACTCAAAGCTTGTCCAAGCCTGGCGAGGGTG...ATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAAATTTGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAATTATTTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGGCCAGAGGTGTCACTAGCTACATTTTCATaGTTGCCTTGGTCTCAACAA | + |
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Preference number: 2 (lower is better) Translates to: FNYLCVCVCVCVWRPEVSLATFS*LPWSQQ Trigger: TTGTTGAGACCAAGGCAACCATGAAAATGTAGCTAG...TGACACCTCTGGCCTCCAGACACACACACACACACACACACACAAATAATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 90 bp | TACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTaGGTCTCAACAAATGAAAAGCAGCATGGAGCAGCTAGCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: YSLSIKKASYIFMVA*VSTNEKQHGAASKT Trigger: TGTCTTGCTAGCTGCTCCATGCTGCTTTTCATTTGTTGAGACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTGCCACTGTGACACTGTaGTATGAGGAATGTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: ELGFISCKKVPALNSHLLATVTL*YEECTV Trigger: TACAGTACATTCCTCATACCACAGTGTCACAGTGGC...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAATTATTTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGGCCAGAGGTGTCAACCAATATTGCTACTTaGTATGTAACTAAGGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: FNYLCVCVCVCVWRPEVSTNIAT*YVTKGV Trigger: AACTCCCTTAGTTACATAGCAAGTAGCAATATTGGT...TGACACCTCTGGCCTCCAGACACACACACACACACACACACACAAATAATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATTTGGCATCGGGGATATCAAACCCTaGCATCTAGCTATCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FSAIEDTVRTYHNCRFGIGDIKP*HLAIPE Trigger: TTCTGGGATAGCTAGATGCCAGGGTTTGATATCCCC...GATGCCAAATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATTTGGCATCACCTTTCTAATAGGCTaGCTGAGACAGGAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FSAIEDTVRTYHNCRFGITFLIG*LRQEKA Trigger: TGCTTTCTCCTGTCTCAGTCAGCCTATTAGAAAGGT...GATGCCAAATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTTGGTCCTTTTCCCATTACTGTaGCAAGCAAAGGTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: IYSLSIKKASYIFMVALVLFPLL*QAKVSQ Trigger: TTGAGACACCTTTGCTTGTCACAGTAATGGGAAAAG...GACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR TCA 90 bp | AACATGCACACAGAGAAGTGTGTATATAATGGGCATCACAATTGTAGATTTGGCTCCATATGGCCAAACTaGAAATCTCTTTCATATGGA | + |
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Preference number: 2 (lower is better) Translates to: NMHTEKCVYNGHHNCRFGSIWPN*KSLSYG Trigger: TCCATATGAAAGAGATTTTCAGTTTGGCCATATGGA...GCCAAATCTACAATTGTGATGCCCATTATATACACACTTCTCTGTGTGCATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTTGGTCCTCTGCCTTTATTCATaGTCTTTGTGGCTTGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: IYSLSIKKASYIFMVALVLCLYS*SLWLVE Trigger: TTCAACAAGCCACAAAGATCATGAATAAAGGCAGAG...GACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTATGCTATCACCTCCTTaGGCCTTCAATTTAATAAGA | + |
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Preference number: 2 (lower is better) Translates to: ELGFISCKKVPALNSHLLMLSPP*AFNLIR Trigger: TCTTATTAAATTGAAGGCCCAAGGAGGTGATAGCAT...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 90 bp | TGCTCTACAGATATACATGCTTTAATTCATTACTATGATGCAATATaGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: CSTDIHALIHYYDAI*VSIASETRSSLGNQ Trigger: TTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAATATTGCATCATAGTAATGAATTAAAGCATGTATATCTGTAGAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR TCA 72 bp | GAAGCTGGTCCACCCTCGCCAGGCTTGGACAAGCTTTaGGTTTCTCTGGGTTGCTTAGCCACATTGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EAGPPSPGLDKL*VSLGCLATLRQ Trigger: CTGCCTCAATGTGGCTAAGCAACCCAGAGAAACTCAAAGCTTGTCCAAGCCTGGCGAGGGTGGACCAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR TCA 72 bp | TTCACTCTGCCTTTATTCATGATCTTTGTGGCTTGTTaGAGCTGGTCCACCCTCGCCAGGCTTGGACAAGCT | + |
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Preference number: 3 (lower is better) Translates to: FTLPLFMIFVAC*SWSTLARLGQA Trigger: AGCTTGTCCAAGCCTGGCGAGGGTGGACCAGCTTCAACAAGCCACAAAGATCATGAATAAAGGCAGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR GCA 72 bp | CACATTGAGGCAGAAACTTTCCTAGGAACATCCTCATaGAGACAGAGCTTAACAGGGTTCCTGGGGATATCA | + |
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Preference number: 3 (lower is better) Translates to: HIEAETFLGTSS*RQSLTGFLGIS Trigger: TGATATCCCCAGGAACCCTGTTAAGCTCTGTCTGCATGAGGATGTTCCTAGGAAAGTTTCTGCCTCAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGATTTCAGAACAGAGGTGCTGAGGATGTTGGGCTAAGCATGCATCCTCTGCTAGGATCTCTCCCCTaGTTCATGAAATCTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: ERFQNRGAEDVGLSMHPLLGSLP*FMKSEF Trigger: AAATTCAGATTTCATGAACAAGGGGAGAGATCCTAG...CAGAGGATGCATGCTTAGCCCAACATCCTCAGCACCTCTGTTCTGAAATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAATTATTTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGGCCAGAGGTGTCAGATGTATTTAATGGGTaGGGTCTTTGTCTCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: FNYLCVCVCVCVWRPEVSDVFNG*GLCLWR Trigger: CCTCCAGAGACAAAGACCCAACCCATTAAATACATC...TGACACCTCTGGCCTCCAGACACACACACACACACACACACACAAATAATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR GCA 72 bp | AGCAAAGGTGTCTCAAGTAACACTTCAAGGGACATTTaGACCTGTGAGCCTCTGTCATACAAAACCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SKGVSSNTSRDI*TCEPLSYKTFL Trigger: TAGAAAGGTTTTGTATGACAGAGGCTCACAGGTGCAAATGTCCCTTGAAGTGTTACTTGAGACACCTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CCA 72 bp | GCTGGTACTGTACCATCCAAAATGCTATTAATGAACTaGACCATGTCGCTCGCATCCTTAATATGTCTATCT | + |
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Preference number: 3 (lower is better) Translates to: AGTVPSKMLLMN*TMSLASLICLS Trigger: AGATAGACATATTAAGGATGCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAGTACCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAAAGCAAAGTCAAACTGTTCATCACTTaGTTCCAAACATCTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LVSIASETRSSLGNQSKVKLFIT*FQTSSY Trigger: GTAGGAAGATGTTTGGAACAAAGTGATGAACAGTTT...GACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR-3UTR CAA 90 bp | AATGCTATCACCTCCTTGGGCTGGTACTGTACCATCCAAAATGCTATTAATGAATCAGTACAACTATTGTaGGGACTGTTAATTCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NAITSLGWYCTIQNAINESVQLL*GLLIRP Trigger: TGGACGAATTAACAGTCCCAACAATAGTTGTACTGA...TTCATTAATAGCATTTTGGATGGTACAGTACCAGCCCAAGGAGGTGATAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| 3UTR-3UTR CAA 90 bp | GGTACTCCCTATTTCTTCACGTCTCTCTTCTTACCACACATTATCATTAATGAGCAATATTGGTTAGTATaGCATCAGAAACCAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GTPYFFTSLFLPHIIINEQYWLV*HQKPEA Trigger: AGCTTCTGGTTTCTGATGCAATACTAACCAATATTG...CTCATTAATGATAATGTGTGGTAAGAAGAGAGACGTGAAGAAATAGGGAGTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR-3UTR CAA 90 bp | ATTTACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTTGGTCAATGCTATCACCTCCTaGGGCCTTCAATTTAATAAG | + |
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Preference number: 3 (lower is better) Translates to: IYSLSIKKASYIFMVALVNAITS*GLQFNK Trigger: CTTATTAAATTGAAGGCCCAAGGAGGTGATAGCATT...GACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 72 bp | CTCGCCAGGCTTGGACAAGCTTTGAGTTTCTCTGGGTaGCTTAGCCACATTGAGGCAGAAACTTTCCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LARLGQALSFSG*LSHIEAETFLG Trigger: TCCTAGGAAAGTTTCTGCCTCAATGTGGCTAAGCAACCCAGAGAAACTCAAAGCTTGTCCAAGCCTGGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATTTCAGAACAGAGGTGCTGAGGATGTTGGGCTAAGCATGCATCCTCTGCCACTGCTGGACTCTTaGTCTTTGCTCTCTTCTATC | + |
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Preference number: 4 (lower is better) Translates to: ERFQNRGAEDVGLSMHPLPLLDS*SLLSSI Trigger: GATAGAAGAGAGCAAAGAGCAAGAGTCCAGCAGTGG...CAGAGGATGCATGCTTAGCCCAACATCCTCAGCACCTCTGTTCTGAAATCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| 3UTR CAA 72 bp | AAAATTCACTCTGCCTTTATTCATGATCTTTGTGGCTaGTTGAAGCTGGTCCACCCTCGCCAGGCTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: KIHSAFIHDLCG*LKLVHPRQAWT Trigger: TGTCCAAGCCTGGCGAGGGTGGACCAGCTTCAACAAGCCACAAAGATCATGAATAAAGGCAGAGTGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CCA 90 bp | TTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAAAGCAAAGTCATGCTATCACCTCCTTaGGCTGGTACTGTACCATCC | + |
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Preference number: 4 (lower is better) Translates to: LVSIASETRSSLGNQSKVMLSPP*AGTVPS Trigger: GGATGGTACAGTACCAGCCCAAGGAGGTGATAGCAT...GACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTACTGATGACACCCAGTaGCAGCCCGAAAAGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPTDDTQ*QPEKKA Trigger: TGCTTTCTTTTCGGGCTGCCACTGGGTGTCATCAGT...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | AATAGGCTGACTGAGACAGGAGAAAGCAGTGGGATGAAGCTGATTCCCTCTAACAGCAATGCTAGAATATaGAGTAGCATCCATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NRLTETGESSGMKLIPSNSNARI*SSIHLS Trigger: GGAAAGATGGATGCTACTTCATATTCTAGCATTGCT...GTTAGAGGGAATCAGCTTCATCCCACTGCTTTCTCCTGTCTCAGTCAGCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR TCA 90 bp | GAGAGATTTCAGAACAGAGGTGCTGAGGATGTTGGGCTAAGCATGCATCCTCTGTTTCTCTTTCAAGGGTaGTTCTCCACCAATATAAAC | + |
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Preference number: 4 (lower is better) Translates to: ERFQNRGAEDVGLSMHPLFLFQG*FSTNIN Trigger: GTTTATATTGGTGGAGAATCACCCTTGAAAGAGAAA...CAGAGGATGCATGCTTAGCCCAACATCCTCAGCACCTCTGTTCTGAAATCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR GCA 90 bp | TTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAAAGCAAAGTCATGGCCACACCAGGGTaGATAGAAATCAACAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LVSIASETRSSLGNQSKVMATPG*IEINKP Trigger: TGGCTTGTTGATTTCTATGCACCCTGGTGTGGCCAT...GACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CCA 90 bp | AATAGGCTGACTGAGACAGGAGAAAGCAGTGGGATGAAGCTGATTCCCTCTAACATCATCTTTAGTCCGTaGTCCTCGGTAATTATATGC | + |
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Preference number: 4 (lower is better) Translates to: NRLTETGESSGMKLIPSNIIFSP*SSVIIC Trigger: GCATATAATTACCGAGGACCACGGACTAAAGATGAT...GTTAGAGGGAATCAGCTTCATCCCACTGCTTTCTCCTGTCTCAGTCAGCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 72 bp | CAGAGGTGTCAGATCTCCTGTAGGTCGGAAATGAACTaGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: QRCQISCRSEMN*GSFPVKRYQLL Trigger: TAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTCATTTCCGACCTACAGGAGATCTGACACCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CCA 90 bp | AATAGGCTGACTGAGACAGGAGAAAGCAGTGGGATGAAGCTGATTCCCTCTAACAAATCTCTATGGAAGTaGTCTCTGAAATCTCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: NRLTETGESSGMKLIPSNKSLWK*SLKSLA Trigger: TGCTAGAGATTTCAGAGACCACTTCCATAGAGATTT...GTTAGAGGGAATCAGCTTCATCCCACTGCTTTCTCCTGTCTCAGTCAGCCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| 3UTR CAA 72 bp | TATTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTaGGCAATCAAAGCAAAGTCCCCAAGTAACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YWLVLHQKPEAP*AIKAKSPSNFR Trigger: CCTGAAGTTACTTGGGGACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTTCCATATGGCCAAACTaGAAATCTCTATGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPSIWPN*KSLWKW Trigger: CCACTTCCATAGAGATTTTCAGTTTGGCCATATGGA...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR GCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTATGGCCACACCAGGGTaGATAGAAATCAACAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGFISCKKVPALNSHLLMATPG*IEINKP Trigger: TGGCTTGTTGATTTCTATGCACCCTGGTGTGGCCAT...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR GCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTTGGACTCTTGCTCTTTaGTCTCTTCTATCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPWTLAL*SLLSVP Trigger: AGGAACAGATAGAAGAGAGCAAAGAGCAAGAGTCCA...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CCA 90 bp | TACAATGATCTGGCTTTGTTTTGGACAAACTGTTCATCACTTTGTTCCAAACATGAGACCCTCCACTGCTaGACTCTTGCTCTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNDLALFWTNCSSLCSKHETLHC*TLALCS Trigger: AGAGCAAAGAGCAAGAGTCCAGCAGTGGAGGGTCTC...ATGTTTGGAACAAAGTGATGAACAGTTTGTCCAAAACAAAGCCAGATCATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTAGCAATGCTAGAATATaGAGTAGCATCCATCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPSNARI*SSIHLS Trigger: GGAAAGATGGATGCTACTTCATATTCTAGCATTGCT...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | TTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAAAGCAAAGTCAATAAGTGTCATCTTTaGAAACAAGCACAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSIASETRSSLGNQSKVNKCHL*KQAQQA Trigger: TGCCTGCTGTGCTTGTTTTCAAAGATGACACTTATT...GACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR GCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTTTTCTCATCAATAACTaGTATGGCCACAAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPFLINN*YGHKLS Trigger: GGAAAGCTTGTGGCCATAGCAGTTATTGATGAGAAA...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | ATTTACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTTGGTCGCCCCAGACACTCTGTaGGCAAACTCAATTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: IYSLSIKKASYIFMVALVAPDTL*ANSIIS Trigger: TGATATAATTGAGTTTGCTCACAGAGTGTCTGGGGC...GACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTAGTATTGCATCAGAAACCAGAAGCTCCCTTGGCAATCAAAGCAAAGTCTCTGGTATGCTCAAGTaGTGTGTTTTTCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSIASETRSSLGNQSKVSGMLK*CVFLIN Trigger: ATTGATGAGAAAAACACATCACTTGAGCATACCAGA...GACTTTGCTTTGATTGCCAAGGGAGCTTCTGGTTTCTGATGCAATACTAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTTCCATATGGCCAAACTaGAAATCTCTATGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELGFISCKKVPALNSHLLSIWPN*KSLWKW Trigger: CCACTTCCATAGAGATTTTCAGTTTGGCCATATGGA...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CCA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTAAATCTCTATGGAAGTaGTCTCTGAAATCTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNFRVRATNHVCKCSADPKSLWK*SLKSLA Trigger: TGCTAGAGATTTCAGAGACCACTTCCATAGAGATTT...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR TCA 90 bp | TACAATGATCTGGCTTTGTTTTGGACAAACTGTTCATCACTTTGTTCCAAACATGCCCCAGACACTCTGTaGGCAAACTCAATTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: YNDLALFWTNCSSLCSKHAPDTL*ANSIIS Trigger: TGATATAATTGAGTTTGCTCACAGAGTGTCTGGGGC...ATGTTTGGAACAAAGTGATGAACAGTTTGTCCAAAACAAAGCCAGATCATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR GCA 90 bp | GAACTTGGGTTCATTTCCTGTAAAAAGGTACCAGCTCTTAACAGCCATTTACTTTTTCTCATCAATAACTaGTATGGCCACAAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELGFISCKKVPALNSHLLFLINN*YGHKLS Trigger: GGAAAGCTTGTGGCCATAGCAGTTATTGATGAGAAA...AAGTAAATGGCTGTTAAGAGCTGGTACCTTTTTACAGGAAATGAACCCAAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CCA 90 bp | GGTACTCCCTATTTCTTCACGTCTCTCTTCTTACCACACATTATCATTAATGAGATCATCTTTAGTCCGTaGTCCTCGGTAATTATATGC | + |
|
Preference number: 4 (lower is better) Translates to: GTPYFFTSLFLPHIIINEIIFSP*SSVIIC Trigger: GCATATAATTACCGAGGACCACGGACTAAAGATGAT...CTCATTAATGATAATGTGTGGTAAGAAGAGAGACGTGAAGAAATAGGGAGTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CCA 90 bp | TACAATGATCTGGCTTTGTTTTGGACAAACTGTTCATCACTTTGTTCCAAACATATGCTATTAATGAACTaGACCATGTCGCTCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YNDLALFWTNCSSLCSKHMLLMN*TMSLAS Trigger: GGATGCGAGCGACATGGTCCAGTTCATTAATAGCAT...ATGTTTGGAACAAAGTGATGAACAGTTTGTCCAAAACAAAGCCAGATCATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CCA 90 bp | AGTACTGTTGGTTTGAAGTATTCAGTACAACTATTGTTGGGACTGTTAATTCGTAGCTCCCTATGGAAGTaGTCTCTGAAATCTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STVGLKYSVQLLLGLLIRSSLWK*SLKSLA Trigger: TGCTAGAGATTTCAGAGACCACTTCCATAGGGAGCT...ACGAATTAACAGTCCCAACAATAGTTGTACTGAATACTTCAAACCAACAGTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| CDS-3UTR TCA 90 bp | ATTTACTCCTTATCAATAAAGAAGGCTAGCTACATTTTCATGGTTGCCTTGGTCAATAAGTGTCATCTTTaGAAACAAGCACAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYSLSIKKASYIFMVALVNKCHL*KQAQQA Trigger: TGCCTGCTGTGCTTGTTTTCAAAGATGACACTTATT...GACCAAGGCAACCATGAAAATGTAGCTAGCCTTCTTTATTGATAAGGAGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
||
| CDS-3UTR TCA 90 bp | ATGCACACAGAGAAGTGTGTATATAATGGGCATCACAATTGTAGATTTGGCATCTCTGGTATGCTCAAGTaGTGTGTTTTTCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MHTEKCVYNGHHNCRFGISGMLK*CVFLIN Trigger: ATTGATGAGAAAAACACATCACTTGAGCATACCAGA...GATGCCAAATCTACAATTGTGATGCCCATTATATACACACTTCTCTGTGTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| CDS-3UTR CCA 90 bp | TACAATGATCTGGCTTTGTTTTGGACAAACTGTTCATCACTTTGTTCCAAACATAAAGCAGCCCATAAGTaGAGAGCTCTTGAATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNDLALFWTNCSSLCSKHKAAHK*RALEYR Trigger: TCTATATTCAAGAGCTCTCCACTTATGGGCTGCTTT...ATGTTTGGAACAAAGTGATGAACAGTTTGTCCAAAACAAAGCCAGATCATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR TCA 90 bp | CCCCAAATTTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATTCTGGTATGCTCAAGTaGTGTGTTTTTCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIFQLLKILSELTTIVDSGMLK*CVFLIN Trigger: ATTGATGAGAAAAACACATCACTTGAGCATACCAGA...ATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAAATTTGGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR TCA 90 bp | CCCCAAATTTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATTCCCATTTATCTCTCTaGAATGGACCTGAATTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIFQLLKILSELTTIVDSHLSL*NGPELL Trigger: AAGTAATTCAGGTCCATTTCAGAGAGATAAATGGGA...ATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAAATTTGGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
||
| 3UTR CAA 72 bp | AGTACTGTTGGTTTGAAGTATTCAGTACAACTATTGTaGGGACTGTTAATTCGTCCATCAACAAAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: STVGLKYSVQLL*GLLIRPSTKCL Trigger: TAAACACTTTGTTGATGGACGAATTAACAGTCCCAACAATAGTTGTACTGAATACTTCAAACCAACAGTACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
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| 3UTR CAA 72 bp | AAAAGTACTGTTGGTTTGAAGTATTCAGTACAACTATaGTTGGGACTGTTAATTCGTCCATCAACAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSTVGLKYSVQL*LGLLIRPSTKC Trigger: ACACTTTGTTGATGGACGAATTAACAGTCCCAACAATAGTTGTACTGAATACTTCAAACCAACAGTACTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236602.2 |
||
| CDS CCA 90 bp | GTCAGCTGTATAGATTCCATAGCACATGATACTGATGACACCCAGTaGCAGCCCGAAAAGAAAGCAGCCCATAAGTGGAGAGCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSCIDSIAHDTDDTQ*QPEKKAAHKWRALE Trigger: TTCAAGAGCTCTCCACTTATGGGCTGCTTTCTTTTCGGGCTGCCACTGGGTGTCATCAGTATCATGTGCTATGGAATCTATACAGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CAA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTAATGCTATCACCTCCTaGGGCTGGTACTGTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SNFRVRATNHVCKCSADPNAITS*GWYCTI Trigger: GATGGTACAGTACCAGCCCAAGGAGGTGATAGCATT...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS CCA 90 bp | ACTGATGACACCCAGTGGCAGCCCGAAAAGAAAGCAGCCCATAAGTaGAGAGCTCTTGAATATAGACACAATTGTAGATTTGGCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDDTQWQPEKKAAHK*RALEYRHNCRFGIK Trigger: TTTGATGCCAAATCTACAATTGTGTCTATATTCAAGAGCTCTCCACTTATGGGCTGCTTTCTTTTCGGGCTGCCACTGGGTGTCATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CAA 90 bp | TTTAATTATTTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGGCCAGAGGTGTCAATGGTCGAACATTTGTaGACTTGGAAGAGGCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FNYLCVCVCVCVWRPEVSMVEHL*TWKRPN Trigger: ATTCGGCCTCTTCCAAGTCAACAAATGTTCGACCAT...TGACACCTCTGGCCTCCAGACACACACACACACACACACACACAAATAATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CAA 90 bp | AATAGGCTGACTGAGACAGGAGAAAGCAGTGGGATGAAGCTGATTCCCTCTAACTCAGTACAACTATTGTaGGGACTGTTAATTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NRLTETGESSGMKLIPSNSVQLL*GLLIRP Trigger: TGGACGAATTAACAGTCCCAACAATAGTTGTACTGA...GTTAGAGGGAATCAGCTTCATCCCACTGCTTTCTCCTGTCTCAGTCAGCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CAA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTTCCACTGCTGGACTCTaGCTCTTTGCTCTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SNFRVRATNHVCKCSADPSTAGL*LFALFY Trigger: ATAGAAGAGAGCAAAGAGCAAGAGTCCAGCAGTGGA...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR CAA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTATGGTCGAACATTTGTaGACTTGGAAGAGGCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SNFRVRATNHVCKCSADPMVEHL*TWKRPN Trigger: ATTCGGCCTCTTCCAAGTCAACAAATGTTCGACCAT...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR CAA 90 bp | GGTACTCCCTATTTCTTCACGTCTCTCTTCTTACCACACATTATCATTAATGAGTACATGGTCGAACATTaGTTGACTTGGAAGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTPYFFTSLFLPHIIINEYMVEH*LTWKRP Trigger: CGGCCTCTTCCAAGTCAACAAATGTTCGACCATGTA...CTCATTAATGATAATGTGTGGTAAGAAGAGAGACGTGAAGAAATAGGGAGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
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| CDS-3UTR CAA 90 bp | GGTACTCCCTATTTCTTCACGTCTCTCTTCTTACCACACATTATCATTAATGAGCTGGACTCTTGCTCTTaGCTCTCTTCTATCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTPYFFTSLFLPHIIINELDSCS*LSSICS Trigger: GGAACAGATAGAAGAGAGCAAAGAGCAAGAGTCCAG...CTCATTAATGATAATGTGTGGTAAGAAGAGAGACGTGAAGAAATAGGGAGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR CAA 90 bp | GGTACTCCCTATTTCTTCACGTCTCTCTTCTTACCACACATTATCATTAATGAGCGAACATTTGTTGACTaGGAAGAGGCCGAATTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTPYFFTSLFLPHIIINERTFVD*EEAELE Trigger: CTCTAATTCGGCCTCTTCCAAGTCAACAAATGTTCG...CTCATTAATGATAATGTGTGGTAAGAAGAGAGACGTGAAGAAATAGGGAGTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR CAA 90 bp | AGTAACTTCAGGGTTAGAGCTACAAACCATGTTTGTAAATGCTCAGCGGATCCTTTTTCTAATACATCTTaGGGCTCTTGCACAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNFRVRATNHVCKCSADPFSNTS*GSCTVG Trigger: ACCTACTGTGCAAGAGCCCAAAGATGTATTAGAAAA...AGGATCCGCTGAGCATTTACAAACATGGTTTGTAGCTCTAACCCTGAAGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCTATTGAAGATACTGTCAGAACTTACCACAATTGTAGATTTGGCATCCGAACATTTGTTGACTaGGAAGAGGCCGAATTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSAIEDTVRTYHNCRFGIRTFVD*EEAELE Trigger: CTCTAATTCGGCCTCTTCCAAGTCAACAAATGTTCG...GATGCCAAATCTACAATTGTGGTAAGTTCTGACAGTATCTTCAATAGCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS CCA 90 bp | GAATTACTTACTGGTACTGTACCATCCAAAATGCTATTAATGAACTaGACCATGTCGCTCGCATCCTTAATATGTCTATCTAGCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELLTGTVPSKMLLMN*TMSLASLICLSSKK Trigger: CTTTTTGCTAGATAGACATATTAAGGATGCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAGTACCAGTAAGTAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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| CDS-3UTR CAA 90 bp | TACAATGATCTGGCTTTGTTTTGGACAAACTGTTCATCACTTTGTTCCAAACATTCAGTACAACTATTGTaGGGACTGTTAATTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YNDLALFWTNCSSLCSKHSVQLL*GLLIRP Trigger: TGGACGAATTAACAGTCCCAACAATAGTTGTACTGA...ATGTTTGGAACAAAGTGATGAACAGTTTGTCCAAAACAAAGCCAGATCATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS TCA 72 bp | ACACGGTGCCTCTTCCGTACATGGTCGAACATTTGTTaGCTTGGAAGAGGCCGAATTAGAGCCCCAGACACT | + |
|
Preference number: 6 (lower is better) Translates to: TRCLFRTWSNIC*LGRGRIRAPDT Trigger: AGTGTCTGGGGCTCTAATTCGGCCTCTTCCAAGTCAACAAATGTTCGACCATGTACGGAAGAGGCACCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025515.7 ENSMUST00000235634.2 |
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| CDS CAA 72 bp | GGTGCCTCTTCCGTACATGGTCGAACATTTGTTGACTaGGAAGAGGCCGAATTAGAGCCCCAGACACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GASSVHGRTFVD*EEAELEPQTLC Trigger: ACAGAGTGTCTGGGGCTCTAATTCGGCCTCTTCCAAGTCAACAAATGTTCGACCATGTACGGAAGAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025515.7 ENSMUST00000235634.2 |
||
| CDS CAA 72 bp | GGTGCTAGAGACCCTCCACTGCTGGACTCTTGCTCTTaGCTCTCTTCTATCTGTTCCTGGTTTTCCATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GARDPPLLDSCS*LSSICSWFSIS Trigger: TGAAATGGAAAACCAGGAACAGATAGAAGAGAGCAAAGAGCAAGAGTCCAGCAGTGGAGGGTCTCTAGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS CAA 90 bp | AAAATACACGGTGCCTCTTCCGTACATGGTCGAACATTTGTTGACTaGGAAGAGGCCGAATTAGAGCCCCAGACACTCTGTGAGCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: KIHGASSVHGRTFVD*EEAELEPQTLCEQT Trigger: AGTTTGCTCACAGAGTGTCTGGGGCTCTAATTCGGCCTCTTCCAAGTCAACAAATGTTCGACCATGTACGGAAGAGGCACCGTGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025515.7 ENSMUST00000235634.2 |
||
| CDS CCA 72 bp | ATAGATTCCATAGCACATGATACTGATGACACCCAGTaGCAGCCCGAAAAGAAAGCAGCCCATAAGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IDSIAHDTDDTQ*QPEKKAAHKWR Trigger: TCTCCACTTATGGGCTGCTTTCTTTTCGGGCTGCCACTGGGTGTCATCAGTATCATGTGCTATGGAATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS CAA 90 bp | TGCACAGTAGGTGCTAGAGACCCTCCACTGCTGGACTCTTGCTCTTaGCTCTCTTCTATCTGTTCCTGGTTTTCCATTTCACTTTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CTVGARDPPLLDSCS*LSSICSWFSISLLD Trigger: ATCTAAAAGTGAAATGGAAAACCAGGAACAGATAGAAGAGAGCAAAGAGCAAGAGTCCAGCAGTGGAGGGTCTCTAGCACCTACTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS TCA 72 bp | CTTGGAAGAGGCCGAATTAGAGCCCCAGACACTCTGTaGGCAAACTCAATTATATCATCTTTAGTCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGRGRIRAPDTL*ANSIISSLVRG Trigger: ACCACGGACTAAAGATGATATAATTGAGTTTGCTCACAGAGTGTCTGGGGCTCTAATTCGGCCTCTTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025515.7 ENSMUST00000235634.2 |
||
| CDS CCA 72 bp | ACCCAGTGGCAGCCCGAAAAGAAAGCAGCCCATAAGTaGAGAGCTCTTGAATATAGACACAATTGTAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: TQWQPEKKAAHK*RALEYRHNCRF Trigger: AAATCTACAATTGTGTCTATATTCAAGAGCTCTCCACTTATGGGCTGCTTTCTTTTCGGGCTGCCACTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025515.7 |
||
| CDS CCA 72 bp | ACTGGTACTGTACCATCCAAAATGCTATTAATGAACTaGACCATGTCGCTCGCATCCTTAATATGTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: TGTVPSKMLLMN*TMSLASLICLS Trigger: AGATAGACATATTAAGGATGCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAGTACCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235634.2 |
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