Pregenerated sensors for TMX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050043Ensembl transcript IDs: ENSMUST00000053664.9, ENSMUST00000111664.8, ENSMUST00000111665.8, ENSMUST00000152149.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCAGGCACAGTaGCCCTACCCAGGCACAGCCAAACAGAAATCAAAAGGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SWFPGCFFQNQKQAQ*PYPGTAKQKSKGLR Trigger: CCTGAGGCCTTTTGATTTCTGTTTGGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 90 bp | CCAAACAGAAATCAAAAGGCCTCAGGCAAGGATTGTGGTTATAGCTaGAACTGGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: PNRNQKASGKDCGYS*NWASKVPEIDRRGS Trigger: GCTTCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACAATCCTTGCCTGAGGCCTTTTGATTTCTGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 90 bp | AGAAATCAAAAGGCCTCAGGCAAGGATTGTGGTTATAGCTGGAACTaGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGAAGCAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: RNQKASGKDCGYSWN*ASKVPEIDRRGSKN Trigger: GTTTTTGCTTCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACAATCCTTGCCTGAGGCCTTTTGATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 90 bp | TCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATCGATaGGCCATTTCTCCAGCCCCAAACTTAAATTTCTTAATGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: SGSLEKQPPVLFLNR*AISPAPNLNFLMHR Trigger: TCTGTGCATTAAGAAATTTAAGTTTGGGGCTGGAGAAATGGCCCATCGATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR GCA 90 bp | CTTTCTCTTTACGATTTACTTACTATATATAGTATTCTGCCTGCATaGCAGAAGAGGGCATCAGATCCCATTATGAACCATCATGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LSLYDLLTIYSILPA*QKRASDPIMNHHVV Trigger: AACCACATGATGGTTCATAATGGGATCTGATGCCCTCTTCTGGCATGCAGGCAGAATACTATATATAGTAAGTAAATCGTAAAGAGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | CACACAAAGGAACCTCTCAGGTTTATATTGCCCTTCTCAGTTCCCACAACACAGCAGAAGCAGGCACAGTaGCCCTACCCAGGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: HTKEPLRFILPFSVPTTQQKQAQ*PYPGTA Trigger: GGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTG...CTGTGTTGTGGGAACTGAGAAGGGCAATATAAACCTGAGAGGTTCCTTTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAACAGCTGTCCAGCCGTGGGGCTTTCTTCTTCAGGCCCCACCACACAAATCCGTCACGTGTTTGTaGACTACATGCATACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ERTAVQPWGFLLQAPPHKSVTCL*TTCIQC Trigger: GCACTGTATGCATGTAGTGCACAAACACGTGACGGA...TTTGTGTGGTGGGGCCTGAAGAAGAAAGCCCCACGGCTGGACAGCTGTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATCAGAAGCAGGCACAGTaGCCCTACCCAGGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: WELNSGSLEKQPPVLFLNQKQAQ*PYPGTA Trigger: GGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTG...ATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAGGAAGAAGGGGTCCTTaGGGAAAAATTCTAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CSSVTCLCTTCIQCQPRSGRRGP*GKILRA Trigger: AGCCCTTAGAATTTTTCCTCAAGGACCCCTTCTTCC...TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTATATATAGTATTCTGCCTGCATGCCAGAAGAGGGCATCAGATCCCATTACAGAAGCAGGCACAGTaGCCCTACCCAGGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLYIVFCLHARRGHQIPLQKQAQ*PYPGTA Trigger: GGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTG...TAATGGGATCTGATGCCCTCTTCTGGCATGCAGGCAGAATACTATATATAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAACAGCTGTCCAGCCGTGGGGCTTTCTTCTTCAGGCCCCACCACACAAACTAAGGGCTTTATACTaGCATCTAACATTAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ERTAVQPWGFLLQAPPHKLRALY*HLTLGF Trigger: AAACCCTAATGTTAGATGTCAGTATAAAGCCCTTAG...TTTGTGTGGTGGGGCCTGAAGAAGAAAGCCCCACGGCTGGACAGCTGTTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAACATCAGATCCCATTATaGACCATCATGTGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VPPSRVCALHAYSASQGQHQIPL*TIMWLL Trigger: CAGCAACCACATGATGGTTCATAATGGGATCTGATG...TTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGCTATATATAGTATTCTaGCTGCATGCCAGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RVCALHAYSASQGQGRMLLYIVF*LHARRG Trigger: CCCTCTTCTGGCATGCAGGCAGAATACTATATATAG...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAACCATCATGTGGTTGCTaGGAATTGAACTCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VPPSRVCALHAYSASQGQPSCGC*ELNSGS Trigger: AGATCCTGAGTTCAATTCCCAGCAACCACATGATGG...TTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CAA 90 bp | GAGGGCATCAGATCCCATTATGAACCATCATGTGGTTGCTGGGAATaGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: EGIRSHYEPSCGCWE*NSGSLEKQPPVLFL Trigger: AAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGATGGTTCATAATGGGATCTGATGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CAA 90 bp | AATGATAACACATACAAGCCTTTTATGTGTTCCTCCGTCACGTGTTaGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGAT | + |
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Preference number: 2 (lower is better) Translates to: NDNTYKPFMCSSVTC*CTTCIQCQPRSRAD Trigger: ATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACACATAAAAGGCTTGTATGTGTTATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCACTAAGGGCTTTATACTaGCATCTAACATTAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: CSSVTCLCTTCIQCQPRSLRALY*HLTLGF Trigger: AAACCCTAATGTTAGATGTCAGTATAAAGCCCTTAG...TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATGGAAGAAGGGGTCCTTaGGGAAAAATTCTAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WELNSGSLEKQPPVLFLNGRRGP*GKILRA Trigger: AGCCCTTAGAATTTTTCCTCAAGGACCCCTTCTTCC...ATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGTTGCTGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTTCATGGTTTCCAGGATaGTTCTTTCAAAATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: MWLLGIELRISGKAATSASWFPG*FFQNQK Trigger: CTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGA...AGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATCGATGGGCCATTTCTCCATCATGGTTTCCAGGATaGTTCTTTCAAAATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLEKQPPVLFLNRWAISPSWFPG*FFQNQK Trigger: CTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGA...TGGAGAAATGGCCCATCGATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGACCTTAAATGATAACACATACAAGCCTTTTATGTGTTCCTCCGTCACGCATCAGATCCCATTATaGACCATCATGTGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TVTLNDNTYKPFMCSSVTHQIPL*TIMWLL Trigger: CAGCAACCACATGATGGTTCATAATGGGATCTGATG...CGTGACGGAGGAACACATAAAAGGCTTGTATGTGTTATCATTTAAGGTCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTATATATAGTATTCTGCCTGCATGCCAGAAGAGGGCATCAGATCCCATTAAAAAGCAGCCACCAGTaGTCTTTCTTAATCGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LLYIVFCLHARRGHQIPLKSSHQ*SFLIDG Trigger: CCCATCGATTAAGAAAGAGCACTGGTGGCTGCTTTT...TAATGGGATCTGATGCCCTCTTCTGGCATGCAGGCAGAATACTATATATAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGACCTTAAATGATAACACATACAAGCCTTTTATGTGTTCCTCCGTCACGCTATATATAGTATTCTaGCTGCATGCCAGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TVTLNDNTYKPFMCSSVTLYIVF*LHARRG Trigger: CCCTCTTCTGGCATGCAGGCAGAATACTATATATAG...CGTGACGGAGGAACACATAAAAGGCTTGTATGTGTTATCATTTAAGGTCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCAGTTCCCACAACACAGGGTGGCCATTCAATTCTATTTCCAATGATGAACTAAGGGCTTTATACTaGCATCTAACATTAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LLSSHNTGWPFNSISNDELRALY*HLTLGF Trigger: AAACCCTAATGTTAGATGTCAGTATAAAGCCCTTAG...TTCATCATTGGAAATAGAATTGAATGGCCACCCTGTGTTGTGGGAACTGAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAACAGCTGTCCAGCCGTGGGGCTTTCTTCTTCAGGCCCCACCACACAAACCTCTCAGGTTTATATaGCCCTTCTCAGTTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: ERTAVQPWGFLLQAPPHKPLRFI*PFSVPT Trigger: TGTGGGAACTGAGAAGGGCAATATAAACCTGAGAGG...TTTGTGTGGTGGGGCCTGAAGAAGAAAGCCCCACGGCTGGACAGCTGTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGCAAAGGTTCCTGAAATaGACAGGAGAGGAAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSRVCALHAYSASQGQGRQRFLK*TGEEAK Trigger: TTTTGCTTCCTCTCCTGTCAATTTCAGGAACCTTTG...CCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGAGGAAGAAGGGGTCCTaGAGGAAAAATTCTAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: MCSSVTCLCTTCIQCQPRRKKGS*RKNSKG Trigger: GCCCTTAGAATTTTTCCTCAAGGACCCCTTCTTCCT...CCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGAAGAAGGGGTCCTaGAGGAAAAATTCTAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: CSSVTCLCTTCIQCQPRSRKKGS*RKNSKG Trigger: GCCCTTAGAATTTTTCCTCAAGGACCCCTTCTTCCT...TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 72 bp | AAGGCCTCAGGCAAGGATTGTGGTTATAGCTGGAACTaGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KASGKDCGYSWN*ASKVPEIDRRG Trigger: TCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACAATCCTTGCCTGAGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR GCA 72 bp | CCAGGATGCTTCTTTCAAAATCAGAAGCAGGCACAGTaGCCCTACCCAGGCACAGCCAAACAGAAATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PGCFFQNQKQAQ*PYPGTAKQKSK Trigger: TTTTGATTTCTGTTTGGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTGATTTTGAAAGAAGCATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR GCA 72 bp | TACAAGCCTTTTATGTGTTCCTCCGTCACGTGTTTGTaGACTACATGCATACAGTGCCAGCCAAGGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: YKPFMCSSVTCL*TTCIQCQPRSR Trigger: CCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACACATAAAAGGCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCACAAAGGTTCCTGAAATaGACAGGAGAGGAAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSSVTCLCTTCIQCQPRSQRFLK*TGEEAK Trigger: TTTTGCTTCCTCTCCTGTCAATTTCAGGAACCTTTG...TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR-3UTR CAA 90 bp | CCACCAGTGCTCTTTCTTAATCGATGGGCCATTTCTCCAGCCCCAAACTTAAATAGGAAGAAGGGGTCCTaGAGGAAAAATTCTAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: PPVLFLNRWAISPAPNLNRKKGS*RKNSKG Trigger: GCCCTTAGAATTTTTCCTCAAGGACCCCTTCTTCCT...ATTTAAGTTTGGGGCTGGAGAAATGGCCCATCGATTAAGAAAGAGCACTGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR GCA 72 bp | GAGGGCATCAGATCCCATTATGAACCATCATGTGGTTaGTGGGAATTGAACTCAGGATCTCTGGAAAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: EGIRSHYEPSCG*WELNSGSLEKQ Trigger: CTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGATGGTTCATAATGGGATCTGATGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 72 bp | AATCAAAAGGCCTCAGGCAAGGATTGTGGTTATAGCTaGAACTGGGCCTCAAAGGTTCCTGAAATTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: NQKASGKDCGYS*NWASKVPEIDR Trigger: CCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACAATCCTTGCCTGAGGCCTTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 72 bp | GGCATCAGATCCCATTATGAACCATCATGTGGTTGCTaGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GIRSHYEPSCGC*ELNSGSLEKQP Trigger: TGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGATGGTTCATAATGGGATCTGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR CCA 72 bp | CTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATCGATaGGCCATTTCTCCAGCCCCAAACTTAAATTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LEKQPPVLFLNR*AISPAPNLNFL Trigger: TAAGAAATTTAAGTTTGGGGCTGGAGAAATGGCCCATCGATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| 3UTR GCA 72 bp | TACGATTTACTTACTATATATAGTATTCTGCCTGCATaGCAGAAGAGGGCATCAGATCCCATTATGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: YDLLTIYSILPA*QKRASDPIMNH Trigger: ATGGTTCATAATGGGATCTGATGCCCTCTTCTGGCATGCAGGCAGAATACTATATATAGTAAGTAAATCGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGTCTGCGGCCGACGAATaGCCTCCTTGCCGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RVCALHAYSASQGQGRMLSAADE*PPCRLG Trigger: TCCAAGGCGGCAAGGAGGTCATTCGTCGGCCGCAGA...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCACAGCCAAACAGAAATCAAAAGGCCTCAGGCAAGGATTGTGGTTATATCTGCGGCCGACGAATaGCCTCCTTGCCGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PRHSQTEIKRPQARIVVISAADE*PPCRLG Trigger: TCCAAGGCGGCAAGGAGGTCATTCGTCGGCCGCAGA...TATAACCACAATCCTTGCCTGAGGCCTTTTGATTTCTGTTTGGCTGTGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR GCA 90 bp | TCAAGGGCGGATGTTGGAGCCCCTGAGACTAGAGTTACAGGTGGTTTAGCCTCTCAAAGTCACACGGGTTaGCATCTTCGCGTTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRADVGAPETRVTGGLASQSHTG*HLRVAW Trigger: CCACGCAACGCGAAGATGGCAACCCGTGTGACTTTG...AGAGGCTAAACCACCTGTAACTCTAGTCTCAGGGGCTCCAACATCCGCCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CCA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGCTTGTTTTCCCCATCTaGCACAGTAGTGGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVCALHAYSASQGQGRMLLVFPI*HSSGSR Trigger: CCTGCTCCCACTACTGTGCCAGATGGGGAAAACAAG...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGCATGTTGCTCCACAGTaGTGGATCTGCGGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVCALHAYSASQGQGRMLHVAPQ*WICGSS Trigger: TGAAGAACCGCAGATCCATCACTGTGGAGCAACATG...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR GCA 90 bp | CCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGCCTACATGTTaGTCCACAGTGATGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSRVCALHAYSASQGQGRMLPTC*STVMDL Trigger: CAGATCCATCACTGTGGAGCAACATGTAGGCAACAT...CCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | TGTTCCTCCGTCACGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCACATGTTGCTCCACAGTaGTGGATCTGCGGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSVTCLCTTCIQCQPRSHVAPQ*WICGSS Trigger: TGAAGAACCGCAGATCCATCACTGTGGAGCAACATG...TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGACACTATGCAGAGTGTaGGGTATAGCAGACCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RVCALHAYSASQGQGRMLTLCRV*GIADPF Trigger: GAATGGGTCTGCTATACCTCACACTCTGCATAGTGT...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR CCA 90 bp | ACCATCATGTGGTTGCTGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCCTTGTTTTCCCCATCTaGCACAGTAGTGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIMWLLGIELRISGKAATLVFPI*HSSGSR Trigger: CCTGCTCCCACTACTGTGCCAGATGGGGAAAACAAG...GGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CCA 90 bp | TGTGGTTATAGCTGGAACTGGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGACTTGTTTTCCCCATCTaGCACAGTAGTGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGYSWNWASKVPEIDRRGLVFPI*HSSGSR Trigger: CCTGCTCCCACTACTGTGCCAGATGGGGAAAACAAG...TCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGCTGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTACACTATGCAGAGTGTaGGGTATAGCAGACCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MWLLGIELRISGKAATSATLCRV*GIADPF Trigger: GAATGGGTCTGCTATACCTCACACTCTGCATAGTGT...AGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | TGTGGTTATAGCTGGAACTGGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGACTGAACAGTTGTACTTaGGGGACAAGTCCGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGYSWNWASKVPEIDRRGLNSCT*GTSPHR Trigger: TCTATGCGGACTTGTCCCTCAAGTACAACTGTTCAG...TCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR TCA 90 bp | CTTCATAGTAGAATACTTCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCTCTGCGGCCGACGAATaGCCTCCTTGCCGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSRILHGFQDASFKIRSSAADE*PPCRLG Trigger: TCCAAGGCGGCAAGGAGGTCATTCGTCGGCCGCAGA...GCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGAAGTATTCTACTATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR GCA 90 bp | CTTCTCAGTTCCCACAACACAGGGTGGCCATTCAATTCTATTTCCAATGATGAACCTTTCTTGTCAATCTaGGGCCGACGAATGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHNTGWPFNSISNDEPFLSI*GRRMTS Trigger: GGAGGTCATTCGTCGGCCGCAGATTGACAAGAAAGG...TTCATCATTGGAAATAGAATTGAATGGCCACCCTGTGTTGTGGGAACTGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCACAGCCAAACAGAAATCAAAAGGCCTCAGGCAAGGATTGTGGTTATAAGGTCATCAGGAACATaGATCTGCGGTTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PRHSQTEIKRPQARIVVIRSSGT*ICGSSS Trigger: TGATGAAGAACCGCAGATCCATGTTCCTGATGACCT...TATAACCACAATCCTTGCCTGAGGCCTTTTGATTTCTGTTTGGCTGTGCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111664.8 |
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| 3UTR CAA 72 bp | ACATACAAGCCTTTTATGTGTTCCTCCGTCACGTGTTaGTGCACTACATGCATACAGTGCCAGCCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TYKPFMCSSVTC*CTTCIQCQPRS Trigger: TGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACGTGACGGAGGAACACATAAAAGGCTTGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR GCA 90 bp | ATAGTAGAATACTTCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCAGGCCAAAGTCACACGGGTTaGCATCTTCGCGTTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVEYFMVSRMLLSKSEAGQSHTG*HLRVAW Trigger: CCACGCAACGCGAAGATGGCAACCCGTGTGACTTTG...GCCTGCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGAAGTATTCTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR GCA 90 bp | CTTCATAGTAGAATACTTCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCTGTACAGCGGGGGCTTaGAGGTCATCAGGAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSRILHGFQDASFKIRSCTAGA*RSSGTW Trigger: CCATGTTCCTGATGACCTGCAAGCCCCCGCTGTACA...GCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGAAGTATTCTACTATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111664.8 |
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| CDS-3UTR GCA 90 bp | ACAGTGACCTTAAATGATAACACATACAAGCCTTTTATGTGTTCCTCCGTCACGATGTTGCCTACATGTTaGTCCACAGTGATGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTLNDNTYKPFMCSSVTMLPTC*STVMDL Trigger: CAGATCCATCACTGTGGAGCAACATGTAGGCAACAT...CGTGACGGAGGAACACATAAAAGGCTTGTATGTGTTATCATTTAAGGTCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| 3UTR CAA 72 bp | GGAATAATTAAACCACAGACTGGTAATATCCAAGTGTaGAATAGCAATTTACACATTGACCCAACCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIIKPQTGNIQV*NSNLHIDPTLE Trigger: CTCCAAGGTTGGGTCAATGTGTAAATTGCTATTCAACACTTGGATATTACCAGTCTGTGGTTTAATTATTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS GCA 90 bp | TCCACTTCTCTCCAGTCAAAGTCACACGGGTTGCCATCTTCGCGTTaGGTGGGGAGACCATTGCAAATCGGTGGCAGTTTCCTCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STSLQSKSHGLPSSR*VGRPLQIGGSFLTR Trigger: CCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CCA 90 bp | CGGGTTGCCATCTTCGCGTTGCGTGGGGAGACCATTGCAAATCGGTaGCAGTTTCCTCACGAGGAGGAAAGCAATGGAAAGCAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVAIFALRGETIANR*QFPHEEESNGKQSR Trigger: TCTGCTCTGCTTTCCATTGCTTTCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CCA 90 bp | CTTCTCTCCAGTCAAAGTCACACGGGTTGCCATCTTCGCGTTGCGTaGGGAGACCATTGCAAATCGGTGGCAGTTTCCTCACGAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSQSHTGCHLRVA*GDHCKSVAVSSRGG Trigger: TCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGGCACAGTGCCCCTACCCAGGCACAGCCAAACAGAAATCAAAAGGCTCAAAGTCACACGGGTaGCCATCTTCGCGTTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QKQAQCPYPGTAKQKSKGSKSHG*PSSRCV Trigger: CACGCAACGCGAAGATGGCAACCCGTGTGACTTTGA...GCCTTTTGATTTCTGTTTGGCTGTGCCTGGGTAGGGGCACTGTGCCTGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS GCA 90 bp | GGAACATCAGGATCTCCACTTCTCTCCAGTCAAAGTCACACGGGTTaGCATCTTCGCGTTGCGTGGGGAGACCATTGCAAATCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTSGSPLLSSQSHTG*HLRVAWGDHCKSVA Trigger: TGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAGTGGAGATCCTGATGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGGCGGATGTTGGAGCCCCTGAGACTAGAGTTACAGGTGGTTTAGCCTCTATGTACAGCGGGGGCTaGCAGGTCATCAGGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: SRADVGAPETRVTGGLASMYSGG*QVIRNT Trigger: AGTGTTCCTGATGACCTGCAAGCCCCCGCTGTACAT...AGAGGCTAAACCACCTGTAACTCTAGTCTCAGGGGCTCCAACATCCGCCCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS GCA 90 bp | CAAAGTCACACGGGTTGCCATCTTCGCGTTGCGTGGGGAGACCATTaGAAATCGGTGGCAGTTTCCTCACGAGGAGGAAAGCAATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSHTGCHLRVAWGDH*KSVAVSSRGGKQWK Trigger: TTTCCATTGCTTTCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS-3UTR CAA 90 bp | CGTGTTTGTGCACTACATGCATACAGTGCCAGCCAAGGTCAAGGGCGGATGTTGGGTGATGTGCTCACTTaGTACCGTGTGCTAACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVCALHAYSASQGQGRMLGDVLT*YRVLTS Trigger: TGACGTTAGCACACGGTACAAAGTGAGCACATCACC...CAACATCCGCCCTTGACCTTGGCTGGCACTGTATGCATGTAGTGCACAAACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CAA 90 bp | TACTTCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCAGGCACAGTGCCCATGTACAGCGGGGGCTaGCAGGTCATCAGGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: YFMVSRMLLSKSEAGTVPMYSGG*QVIRNT Trigger: AGTGTTCCTGATGACCTGCAAGCCCCCGCTGTACAT...GGGCACTGTGCCTGCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053664.9 ENSMUST00000111665.8 |
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| CDS-3UTR CAA 90 bp | TGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATTCAAAGTCACACGGGTaGCCATCTTCGCGTTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WELNSGSLEKQPPVLFLNSKSHG*PSSRCV Trigger: CACGCAACGCGAAGATGGCAACCCGTGTGACTTTGA...ATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CAA 90 bp | TGTGGTTATAGCTGGAACTGGGCCTCAAAGGTTCCTGAAATTGACAGGAGAGGAGGTGATGTGCTCACTTaGTACCGTGTGCTAACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CGYSWNWASKVPEIDRRGGDVLT*YRVLTS Trigger: TGACGTTAGCACACGGTACAAAGTGAGCACATCACC...TCCTCTCCTGTCAATTTCAGGAACCTTTGAGGCCCAGTTCCAGCTATAACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS-3UTR CAA 90 bp | TGGGAATTGAACTCAGGATCTCTGGAAAAGCAGCCACCAGTGCTCTTTCTTAATATGTACAGCGGGGGCTaGCAGGTCATCAGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: WELNSGSLEKQPPVLFLNMYSGG*QVIRNM Trigger: CATGTTCCTGATGACCTGCAAGCCCCCGCTGTACAT...ATTAAGAAAGAGCACTGGTGGCTGCTTTTCCAGAGATCCTGAGTTCAATTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111664.8 |
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| CDS-3UTR CAA 90 bp | CTTCATAGTAGAATACTTCATGGTTTCCAGGATGCTTCTTTCAAAATCAGAAGCTCAAAGTCACACGGGTaGCCATCTTCGCGTTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHSRILHGFQDASFKIRSSKSHG*PSSRCV Trigger: CACGCAACGCGAAGATGGCAACCCGTGTGACTTTGA...GCTTCTGATTTTGAAAGAAGCATCCTGGAAACCATGAAGTATTCTACTATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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| CDS GCA 72 bp | ACGGGTTGCCATCTTCGCGTTGCGTGGGGAGACCATTaGAAATCGGTGGCAGTTTCCTCACGAGGAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TGCHLRVAWGDH*KSVAVSSRGGK Trigger: CTTTCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 72 bp | CACGGGTTGCCATCTTCGCGTTGCGTGGGGAGACCATaGCAAATCGGTGGCAGTTTCCTCACGAGGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HGLPSSRCVGRP*QIGGSFLTRRK Trigger: TTTCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 90 bp | CTCCACTTCTCTCCAGTCAAAGTCACACGGGTTGCCATCTTCGCGTaGCGTGGGGAGACCATTGCAAATCGGTGGCAGTTTCCTCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LHFSPVKVTRVAIFA*RGETIANRWQFPHE Trigger: CTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS GCA 72 bp | CTCCAGTCAAAGTCACACGGGTTGCCATCTTCGCGTTaGGTGGGGAGACCATTGCAAATCGGTGGCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSKSHGLPSSR*VGRPLQIGGSF Trigger: GAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS GCA 72 bp | GGATCTCCACTTCTCTCCAGTCAAAGTCACACGGGTTaGCATCTTCGCGTTGCGTGGGGAGACCATTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSPLLSSQSHTG*HLRVAWGDHCK Trigger: TTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAGTGGAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CCA 72 bp | AGTCAAAGTCACACGGGTTGCCATCTTCGCGTTGCGTaGGGAGACCATTGCAAATCGGTGGCAGTTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQSHTGCHLRVA*GDHCKSVAVSS Trigger: TGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 72 bp | TCTCCAGTCAAAGTCACACGGGTTGCCATCTTCGCGTaGCGTGGGGAGACCATTGCAAATCGGTGGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPVKVTRVAIFA*RGETIANRWQF Trigger: AAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 72 bp | AGGATCTCCACTTCTCTCCAGTCAAAGTCACACGGGTaGCCATCTTCGCGTTGCGTGGGGAGACCATTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RISTSLQSKSHG*PSSRCVGRPLQ Trigger: TTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGACTGGAGAGAAGTGGAGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 90 bp | TCAAAGTCACACGGGTTGCCATCTTCGCGTTGCGTGGGGAGACCATaGCAAATCGGTGGCAGTTTCCTCACGAGGAGGAAAGCAATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SKSHGLPSSRCVGRP*QIGGSFLTRRKAME Trigger: TTCCATTGCTTTCCTCCTCGTGAGGAAACTGCCACCGATTTGCAATGGTCTCCCCACGCAACGCGAAGATGGCAACCCGTGTGACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 ENSMUST00000152149.2 |
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| CDS CAA 90 bp | ATCACATTCTCCTCAGAAAAGGTCCAAGAGACAGCTCGTCCTTTCTaGTCAATCTGCGGCCGACGAATGACCTCCTTGCCGCCTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ITFSSEKVQETARPF*SICGRRMTSLPPWN Trigger: GTTCCAAGGCGGCAAGGAGGTCATTCGTCGGCCGCAGATTGACAAGAAAGGACGAGCTGTCTCTTGGACCTTTTCTGAGGAGAATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053664.9 ENSMUST00000111664.8 ENSMUST00000111665.8 |
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