Pregenerated sensors for TMUB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034757Ensembl transcript IDs: ENSMUST00000036376.13, ENSMUST00000100387.11, ENSMUST00000156326.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATaGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PLDMKGGHTPASWVL*TGYPPYPSYPSLPG Trigger: ACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 90 bp | TATCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTaGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: YLYPLDMKGGHTPAS*VLWTGYPPYPSYPS Trigger: GGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 90 bp | GCAAAATATCCTATTCCTGCTACAAGGGGCACAAGGAGGAGGTGGTaGCAGCTGGGTGCTGTAGGGAAGGCTGGCTGGCAGTCTTCATCC | + |
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Preference number: 1 (lower is better) Translates to: AKYPIPATRGTRRRW*QLGAVGKAGWQSSS Trigger: GGATGAAGACTGCCAGCCAGCCTTCCCTACAGCACCCAGCTGCCACCACCTCCTCCTTGTGCCCCTTGTAGCAGGAATAGGATATTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 90 bp | TATTCCTGCTACAAGGGGCACAAGGAGGAGGTGGTGGCAGCTGGGTaGTGTAGGGAAGGCTGGCTGGCAGTCTTCATCCCTGTGAATTTA | + |
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Preference number: 1 (lower is better) Translates to: YSCYKGHKEEVVAAG*CREGWLAVFIPVNL Trigger: TAAATTCACAGGGATGAAGACTGCCAGCCAGCCTTCCCTACAGCACCCAGCTGCCACCACCTCCTCCTTGTGCCCCTTGTAGCAGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 90 bp | TGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTAAGGCCATGCTaGGCTGTCCTGGCAGCAACCCTGGGGGTTAGGGAACAGACATGC | + |
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Preference number: 1 (lower is better) Translates to: WKVLEASYRSMLRPC*AVLAATLGVREQTC Trigger: GCATGTCTGTTCCCTAACCCCCAGGGTTGCTGCCAGGACAGCTCAGCATGGCCTTAGCATACTTCTGTAGGAAGCCTCAAGTACCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 90 bp | TTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACATaGAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: FYLSCACRDICTLWT*REATHLLPGSYGQG Trigger: ACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 90 bp | GATTCCAAAAGAGGGAAGATGATATCCTCATTTCTACCTGAGTTGTaGTTGCAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: DSKRGKMISSFLPEL*LQRYLYPLDMKGGH Trigger: GTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 90 bp | ACTTTGGGATTCCAAAAGAGGGAAGATGATATCCTCATTTCTACCTaGGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACATGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: TLGFQKREDDILIST*VVLAEISVPSGHEG Trigger: CCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGAATCCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 90 bp | ATCCCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTaGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTAAGGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: IPVNLVSKGPHSSKE*KVLEASYRSMLRPC Trigger: GCATGGCCTTAGCATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTGAAGGAGGAAGACCATaGCTTTCTTTGTCTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EATHLLPGSYGQGTHHTLEGGRP*LSLSPD Trigger: ATCAGGAGACAAAGAAAGGCATGGTCTTCCTCCTTC...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGGGGAGGCCACACACCTaGTTCCTGGGTCCTATGGAC | + |
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Preference number: 2 (lower is better) Translates to: GPHSSKEWKVLEASYRSMGRPHT*FLGPMD Trigger: GTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCC...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTGGGAAGGAGGAAGACCATaGCTTTCTTTGTCTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: QRYLYPLDMKGGHTPASWEGGRP*LSLSPD Trigger: ATCAGGAGACAAAGAAAGGCATGGTCTTCCTCCTTC...CCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAAGACATGCAAGAGACTaGGCCACAGCCAGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SAPLPFLTELYTGLFTNKRHARD*ATARRE Trigger: TTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCT...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAGCCCAGGCTTCTCACTaGTCTTGGCCTGTGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: APLPFLTELYTGLFTNKQAQASH*SWPVNF Trigger: AAAGTTCACAGGCCAAGATCAGTGAGAAGCCTGGGC...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGGGAGGCCACACACCTaGTTCCTGGGTCCTATGGAC | + |
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Preference number: 2 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLGRPHT*FLGPMD Trigger: GTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCC...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGTTAGGGAACAGACATaGAAGAGACTGGGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: SKGPHSSKEWKVLEASYRVREQT*KRLGHS Trigger: GCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAAC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAGTTAGGGAACAGACATaGAAGAGACTGGGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: APLPFLTELYTGLFTNKQVREQT*KRLGHS Trigger: GCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAAC...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CCA 90 bp | ATATCCTCATTTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACCACACACCTGCTTCCTaGGTCCTATGGACAGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: ISSFLPELCLQRYLYPLDHTPAS*VLWTGY Trigger: GTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTG...GTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTTGTACCCTCTGGACATaGAGGGAGGCCACACACCTG | + |
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Preference number: 2 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLCTLWT*REATHL Trigger: CAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACA...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CAA 90 bp | TCCAAAAGAGGGAAGATGATATCCTCATTTCTACCTGAGTTGTGCTaGCAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: SKRGKMISSFLPELC*QRYLYPLDMKGGHT Trigger: TGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CAA 90 bp | TGGGATTCCAAAAGAGGGAAGATGATATCCTCATTTCTACCTGAGTaGTGCTTGCAGAGATATCTGTACCCTCTGGACATGAAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: WDSKRGKMISSFLPE*CLQRYLYPLDMKGG Trigger: GCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGTTGGCCTGTGAACTTTaGGATTCCAAAAGAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GPHSSKEWKVLEASYRSMLACEL*DSKRGK Trigger: CTTCCCTCTTTTGGAATCCCAAAGTTCACAGGCCAA...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGATCCTCATTTCTACCTaGGTTGTGCTTGCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: GPHSSKEWKVLEASYRSMILIST*VVLAEI Trigger: TATCTCTGCAAGCACAACTCAGGTAGAAATGAGGAT...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCCAAAAGAGGGAAGATaGTATCCTCATTTCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: GPHSSKEWKVLEASYRSMPKEGR*YPHFYL Trigger: CAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGAAGGAGGAAGACCATaGCTTTCTTTGTCTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SKGPHSSKEWKVLEASYREGGRP*LSLSPD Trigger: ATCAGGAGACAAAGAAAGGCATGGTCTTCCTCCTTC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGATTGGCCTGTGAACTTTaGGATTCCAAAAGAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SKGPHSSKEWKVLEASYRLACEL*DSKRGK Trigger: CTTCCCTCTTTTGGAATCCCAAAGTTCACAGGCCAA...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAATCCTCATTTCTACCTaGGTTGTGCTTGCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: APLPFLTELYTGLFTNKQILIST*VVLAEI Trigger: TATCTCTGCAAGCACAACTCAGGTAGAAATGAGGAT...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACCAAAAGAGGGAAGATaGTATCCTCATTTCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: SAPLPFLTELYTGLFTNKPKEGR*YPHFYL Trigger: CAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGG...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 72 bp | GTCCTGGCAGCAACCCTGGGGGTTAGGGAACAGACATaGAAGAGACTGGGCCACAGCCAGGAGGGAAGACCC | + |
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Preference number: 3 (lower is better) Translates to: VLAATLGVREQT*KRLGHSQEGRP Trigger: GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCCCAGGGTTGCTGCCAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 72 bp | TACAAGGGGCACAAGGAGGAGGTGGTGGCAGCTGGGTaGTGTAGGGAAGGCTGGCTGGCAGTCTTCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: YKGHKEEVVAAG*CREGWLAVFIP Trigger: AGGGATGAAGACTGCCAGCCAGCCTTCCCTACAGCACCCAGCTGCCACCACCTCCTCCTTGTGCCCCTTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 72 bp | TCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTaGTTCCTGGGTCCTATGGACAGGGTACCCACCATA | + |
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Preference number: 3 (lower is better) Translates to: SVPSGHEGRPHT*FLGPMDRVPTI Trigger: TATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 72 bp | CTTAGGGGAGGGCAGTCTATACCCAGAGCTCATCCTTaGAACTGGGCAGGGCACTGGATTAGGGCCAGTACT | + |
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Preference number: 3 (lower is better) Translates to: LRGGQSIPRAHP*NWAGHWIRAST Trigger: AGTACTGGCCCTAATCCAGTGCCCTGCCCAGTTCCAAGGATGAGCTCTGGGTATAGACTGCCCTCCCCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 72 bp | CTTGAGGCTTCCTACAGAAGTATGCTAAGGCCATGCTaGGCTGTCCTGGCAGCAACCCTGGGGGTTAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LEASYRSMLRPC*AVLAATLGVRE Trigger: TTCCCTAACCCCCAGGGTTGCTGCCAGGACAGCTCAGCATGGCCTTAGCATACTTCTGTAGGAAGCCTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 72 bp | GAGGAGGTGGTGGCAGCTGGGTGCTGTAGGGAAGGCTaGCTGGCAGTCTTCATCCCTGTGAATTTAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: EEVVAAGCCREG*LAVFIPVNLVS Trigger: TGAAACTAAATTCACAGGGATGAAGACTGCCAGCCAGCCTTCCCTACAGCACCCAGCTGCCACCACCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 72 bp | AGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACATaGAGGGAGGCCACACACCTGCTTCCTGGGTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: SCACRDICTLWT*REATHLLPGSY Trigger: ATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTACCTGAGTTGTGCTaGCAGAGATATCTGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: GPHSSKEWKVLEASYRSMLPELC*QRYLYP Trigger: AGGGTACAGATATCTCTGCAAGCACAACTCAGGTAG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGGCTTCTCACTGATCTaGGCCTGTGAACTTTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SKGPHSSKEWKVLEASYRGFSLI*ACELWD Trigger: ATCCCAAAGTTCACAGGCCAAGATCAGTGAGAAGCC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAGGCTTCTCACTGATCTaGGCCTGTGAACTTTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SAPLPFLTELYTGLFTNKGFSLI*ACELWD Trigger: ATCCCAAAGTTCACAGGCCAAGATCAGTGAGAAGCC...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAACTACCTGAGTTGTGCTaGCAGAGATATCTGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: APLPFLTELYTGLFTNKQLPELC*QRYLYP Trigger: AGGGTACAGATATCTCTGCAAGCACAACTCAGGTAG...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR CCA 72 bp | AGCCCAGGCTTCTCACTGATCTTGGCCTGTGAACTTTaGGATTCCAAAAGAGGGAAGATGATATCCTCATTT | + |
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Preference number: 3 (lower is better) Translates to: SPGFSLILACEL*DSKRGKMISSF Trigger: AAATGAGGATATCATCTTCCCTCTTTTGGAATCCCAAAGTTCACAGGCCAAGATCAGTGAGAAGCCTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGATCATTTCTACCTGAGTaGTGCTTGCAGAGATATCTG | + |
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Preference number: 3 (lower is better) Translates to: SKGPHSSKEWKVLEASYRSFLPE*CLQRYL Trigger: CAGATATCTCTGCAAGCACAACTCAGGTAGAAATGA...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR TCA 72 bp | TGGCCTGTGAACTTTGGGATTCCAAAAGAGGGAAGATaGTATCCTCATTTCTACCTGAGTTGTGCTTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: WPVNFGIPKEGR*YPHFYLSCACR Trigger: TCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGAATCCCAAAGTTCACAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| 3UTR GCA 72 bp | AGAGGGAAGATGATATCCTCATTTCTACCTGAGTTGTaGTTGCAGAGATATCTGTACCCTCTGGACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGKMISSFLPEL*LQRYLYPLDMK Trigger: CTTCATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| 3UTR TCA 72 bp | TTCCAAAAGAGGGAAGATGATATCCTCATTTCTACCTaGGTTGTGCTTGCAGAGATATCTGTACCCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQKREDDILIST*VVLAEISVPSG Trigger: TCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| 3UTR CCA 72 bp | AATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTaGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NLVSKGPHSSKE*KVLEASYRSML Trigger: TAGCATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCTGGGGTCAAGGAGGCTaGGGGGCCAGAAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVREQTCKRLGHSQEGRPWGQGG*GARNCC Trigger: GCAGCAGTTTCTGGCCCCTCAGCCTCCTTGACCCCA...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCTGGGGTCAAGGAGGCTaGGGGGCCAGAAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGWGQGG*GARNCC Trigger: GCAGCAGTTTCTGGCCCCTCAGCCTCCTTGACCCCA...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCGAGAGCTCCATGGCCTaGCTGCTGACTGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGESSMA*LLTGST Trigger: CGTGGACCCAGTCAGCAGCCAGGCCATGGAGCTCTC...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCAGTGTCCTCTGGCCTaGCCACAGCTAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: REATHLLPGSYGQGTHHTQCPLA*PQLAPR Trigger: CCGAGGAGCTAGCTGTGGCCAGGCCAGAGGACACTG...GGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCCCTGGGGGTGAGCGGTaGCAGTGGATCACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGPGGER*QWITQL Trigger: CAACTGCGTGATCCACTGCCACCGCTCACCCCCAGG...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCCCTGGGGGTGAGCGGTaGCAGTGGATCACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVREQTCKRLGHSQEGRPPGGER*QWITQL Trigger: CAACTGCGTGATCCACTGCCACCGCTCACCCCCAGG...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTGAGAGCTCCATGGCCTaGCTGCTGACTGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLESSMA*LLTGST Trigger: CGTGGACCCAGTCAGCAGCCAGGCCATGGAGCTCTC...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGCTCCAGGTTCTCCAGTaGCGTCTCCCCCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRLQVLQ*RLPHCH Trigger: GTGACAGTGGGGGAGACGCCACTGGAGAACCTGGAG...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCCTCCAGGTTCTCCAGTaGCGTCTCCCCCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGLQVLQ*RLPHCH Trigger: GTGACAGTGGGGGAGACGCCACTGGAGAACCTGGAG...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCACAGTGTCCTCTGGCCTaGCCACAGCTAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MKGGHTPASWVLWTGYPPQCPLA*PQLAPR Trigger: CCGAGGAGCTAGCTGTGGCCAGGCCAGAGGACACTG...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCGGCCTGGCTGCTGACTaGGTCCACGCTCATAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGGLAAD*VHAHKV Trigger: AACCTTATGAGCGTGGACCCAGTCAGCAGCCAGGCC...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036376.13 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCCCTTGGTTTACCAGCTaGTCCACATGGCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVREQTCKRLGHSQEGRPPWFTS*STWPRW Trigger: CCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGG...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAAGACGTGTCACCTGCTaGCACAATGGTGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKGGHTPASWVLWTGYPPRRVTC*HNGAQQ Trigger: CTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCT...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAGGCCTGGCTGCTGACTaGGTCCACGCTCATAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MKGGHTPASWVLWTGYPPGLAAD*VHAHKV Trigger: AACCTTATGAGCGTGGACCCAGTCAGCAGCCAGGCC...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036376.13 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTTTGCCCCCTGATGGATaGGGGTGTTCGGTTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLLPPDG*GCSVGS Trigger: AGAGCCAACCGAACACCCCCATCCATCAGGGGGCAA...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTGGCCTGGGGGTGAGCGGTaGCAGTGGATCACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRYLYPLDMKGGHTPASWPGGER*QWITQL Trigger: CAACTGCGTGATCCACTGCCACCGCTCACCCCCAGG...CCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTGGGGCCTGGCTGCTGACTaGGTCCACGCTGACAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRYLYPLDMKGGHTPASWGLAAD*VHADKA Trigger: GGCTTTGTCAGCGTGGACCCAGTCAGCAGCCAGGCC...CCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100387.11 |
||
| CDS-3UTR GCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTCAGCCTTGTCATCATTaGCCCCTGATGGATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLQPCHH*PLMDGG Trigger: ACCCCCATCCATCAGGGGGCAATGATGACAAGGCTG...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCTGTCTGCTACATAGGTaGAGAGCCAGGCTAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: REATHLLPGSYGQGTHHTCLLHR*RARLGP Trigger: TGGTCCTAGCCTGGCTCTCCACCTATGTAGCAGACA...GGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGATGGTGCCCAGCAGCTaGTTGTTACCACTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRMVPSS*LLPLSA Trigger: AGCAGACAGTGGTAACAACCAGCTGCTGGGCACCAT...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCGTGTTCGGTTGGCTCTaGAGTGCCTTGGTTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVREQTCKRLGHSQEGRPVFGWL*SALVYQ Trigger: CTGGTAAACCAAGGCACTCCAGAGCCAACCGAACAC...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGCTCCCCCACTGTCACTaGTCTCTTCAGCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRLPHCH*SLQPCH Trigger: ATGACAAGGCTGAAGAGACCAGTGACAGTGGGGGAG...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCCTTTTAGGCAGGCCTTaGATGTCCAGGAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGLLGRP*MSRRCS Trigger: GGAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAG...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGCTTTTAGGCAGGCCTTaGATGTCCAGGAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRLLGRP*MSRRCS Trigger: GGAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAG...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTTTAGGCAGGCCTTaGATGTCCAGGAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: REATHLLPGSYGQGTHHTLLGRP*MSRRCS Trigger: GGAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAG...GGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTGGTGAGCGGTGGCAGTaGATCACGCAGTTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLGERWQ*ITQLLV Trigger: TACCAACAACTGCGTGATCCACTGCCACCGCTCACC...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTATGGTGCCCAGCAGCTaGTTGTTACCACTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLMVPSS*LLPLSA Trigger: AGCAGACAGTGGTAACAACCAGCTGCTGGGCACCAT...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCACTCCCCCACTGTCACTaGTCTCTTCAGCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKGGHTPASWVLWTGYPPLPHCH*SLQPCH Trigger: ATGACAAGGCTGAAGAGACCAGTGACAGTGGGGGAG...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCAGAACTGGCGGTAATTaGTACGGAAGTACCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GVREQTCKRLGHSQEGRPRTGGN*YGSTRP Trigger: TGGTCTGGTACTTCCGTATCAATTACCGCCAGTTCT...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTAGAACTGGCGGTAATTaGTACGGAAGTACCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLRTGGN*YGSTRP Trigger: TGGTCTGGTACTTCCGTATCAATTACCGCCAGTTCT...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGATATCTGTACCCTCTGGACATGAAGGGAGGCCACACACCTGCTTCCTGGGTGTTCGGTTGGCTCTaGAGTGCCTTGGTTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRYLYPLDMKGGHTPASWVFGWL*SALVYQ Trigger: CTGGTAAACCAAGGCACTCCAGAGCCAACCGAACAC...CCAGGAAGCAGGTGTGTGGCCTCCCTTCATGTCCAGAGGGTACAGATATCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTGTCCAGGGAAGTATTTaGTTTTTAGGGTACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EATHLLPGSYGQGTHHTLVQGSI*FLGYPQ Trigger: CTGTGGGTACCCTAAAAAGCAAATACTTCCCTGGAC...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAGTCCAGGGAAGTATTTaGTTTTTAGGGTACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MKGGHTPASWVLWTGYPPVQGSI*FLGYPQ Trigger: CTGTGGGTACCCTAAAAAGCAAATACTTCCCTGGAC...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGAGAGCTCCATGGCCTaGCTGCTGACTGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SKGPHSSKEWKVLEASYRESSMA*LLTGST Trigger: CGTGGACCCAGTCAGCAGCCAGGCCATGGAGCTCTC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACTCCCCAGGCCTGCTTaGCTTTTAGGCAGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLPFLTELYTGLFTNKLPRPA*LLGRPW Trigger: CCAAGGCCTGCCTAAAAGGCAAGCAGGCCTGGGGAG...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCCTTGGTTTACCAGCTaGTCCACATGGCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMPWFTS*STWPRW Trigger: CCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGTTGCCCCCTGATGGATaGGGGTGTTCGGTTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMLPPDG*GCSVGS Trigger: AGAGCCAACCGAACACCCCCATCCATCAGGGGGCAA...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGACTCCAGGTTCTCCAGTaGCGTCTCCCCCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKGPHSSKEWKVLEASYRLQVLQ*RLPHCH Trigger: GTGACAGTGGGGGAGACGCCACTGGAGAACCTGGAG...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | ATATCCTCATTTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACCAGTGTCCTCTGGCCTaGCCACAGCTAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSFLPELCLQRYLYPLDQCPLA*PQLAPR Trigger: CCGAGGAGCTAGCTGTGGCCAGGCCAGAGGACACTG...GTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGACGTGTCACCTGCTaGCACAATGGTGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKGPHSSKEWKVLEASYRRRVTC*HNGAQQ Trigger: CTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCT...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAAGACGTGTCACCTGCTaGCACAATGGTGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLPFLTELYTGLFTNKRRVTC*HNGAQQ Trigger: CTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCT...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCAGCCTTGTCATCATTaGCCCCTGATGGATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMQPCHH*PLMDGG Trigger: ACCCCCATCCATCAGGGGGCAATGATGACAAGGCTG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAGCCTTGTCATCATTaGCCCCTGATGGATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPLPFLTELYTGLFTNKQPCHH*PLMDGG Trigger: ACCCCCATCCATCAGGGGGCAATGATGACAAGGCTG...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGTGTCTGCTACATAGGTaGAGAGCCAGGCTAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMCLLHR*RARLGP Trigger: TGGTCCTAGCCTGGCTCTCCACCTATGTAGCAGACA...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGGTGTTCGGTTGGCTCTaGAGTGCCTTGGTTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMVFGWL*SALVYQ Trigger: CTGGTAAACCAAGGCACTCCAGAGCCAACCGAACAC...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTCCCCCACTGTCACTaGTCTCTTCAGCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPHSSKEWKVLEASYRSMLPHCH*SLQPCH Trigger: ATGACAAGGCTGAAGAGACCAGTGACAGTGGGGGAG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAGGTGAGCGGTGGCAGTaGATCACGCAGTTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APLPFLTELYTGLFTNKQGERWQ*ITQLLV Trigger: TACCAACAACTGCGTGATCCACTGCCACCGCTCACC...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTCTCCCCAGGCCTGCTTaGCTTTTAGGCAGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLLPRPA*LLGRPW Trigger: CCAAGGCCTGCCTAAAAGGCAAGCAGGCCTGGGGAG...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAATGTCTGCTACATAGGTaGAGAGCCAGGCTAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: APLPFLTELYTGLFTNKQCLLHR*RARLGP Trigger: TGGTCCTAGCCTGGCTCTCCACCTATGTAGCAGACA...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAATGGTGCCCAGCAGCTaGTTGTTACCACTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAPLPFLTELYTGLFTNKMVPSS*LLPLSA Trigger: AGCAGACAGTGGTAACAACCAGCTGCTGGGCACCAT...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTCCTTGGTTTACCAGCTaGTCCACATGGCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLPWFTS*STWPRW Trigger: CCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGG...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR TCA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAAGAACTGGCGGTAATTaGTACGGAAGTACCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: APLPFLTELYTGLFTNKQRTGGN*YGSTRP Trigger: TGGTCTGGTACTTCCGTATCAATTACCGCCAGTTCT...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGGTGAGCGGTGGCAGTaGATCACGCAGTTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLGERWQ*ITQLLV Trigger: TACCAACAACTGCGTGATCCACTGCCACCGCTCACC...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAGTCCAGGGAAGTATTTaGTTTTTAGGGTACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPLPFLTELYTGLFTNKVQGSI*FLGYPQ Trigger: CTGTGGGTACCCTAAAAAGCAAATACTTCCCTGGAC...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| 3UTR CAA 72 bp | AAAAGAGGGAAGATGATATCCTCATTTCTACCTGAGTaGTGCTTGCAGAGATATCTGTACCCTCTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: KRGKMISSFLPE*CLQRYLYPLDM Trigger: CATGTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATATCATCTTCCCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCGCTCCCCAGGCCTGCTaGCCTTTTAGGCAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGAPQAC*PFRQAL Trigger: CAAGGCCTGCCTAAAAGGCAAGCAGGCCTGGGGAGC...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS GCA 90 bp | CCCAGGCCTGCTTGCCTTTTAGGCAGGCCTTGGATGTCCAGGAGATaGTCCAGGCTGGGCTCCATCTCTCCCCTAGCTCCAGGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRPACLLGRPWMSRR*SRLGSISPLAPGSP Trigger: TGGAGAACCTGGAGCTAGGGGAGAGATGGAGCCCAGCCTGGAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAGGCAAGCAGGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAGCTCCCCAGGCCTGCTaGCCTTTTAGGCAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MKGGHTPASWVLWTGYPPAPQAC*PFRQAL Trigger: CAAGGCCTGCCTAAAAGGCAAGCAGGCCTGGGGAGC...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 90 bp | CAATGGTGCCCAGCAGCTGGTTGTTACCACTGTCTGCTACATAGGTaGAGAGCCAGGCTAGGACCAGGGCTAGAGTCAGCGCCACCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QWCPAAGCYHCLLHR*RARLGPGLESAPPR Trigger: GCGTGGTGGCGCTGACTCTAGCCCTGGTCCTAGCCTGGCTCTCCACCTATGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCACCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 90 bp | GGCTCTGGAGTGCCTTGGTTTACCAGCTGGTCCACATGGCCCAGGTaGAGAACAGACGTGTCACCTGCTGACACAATGGTGCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGVPWFTSWSTWPR*RTDVSPADTMVPSS Trigger: GCTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 90 bp | GGATGGGGGTGTTCGGTTGGCTCTGGAGTGCCTTGGTTTACCAGCTaGTCCACATGGCCCAGGTGGAGAACAGACGTGTCACCTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GWGCSVGSGVPWFTS*STWPRWRTDVSPAD Trigger: GTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 90 bp | TTGCCCCCTGATGGATGGGGGTGTTCGGTTGGCTCTGGAGTGCCTTaGTTTACCAGCTGGTCCACATGGCCCAGGTGGAGAACAGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPPDGWGCSVGSGVP*FTSWSTWPRWRTDV Trigger: CACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS GCA 90 bp | CATCATTGCCCCCTGATGGATGGGGGTGTTCGGTTGGCTCTGGAGTaGCTTGGTTTACCAGCTGGTCCACATGGCCCAGGTGGAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HHCPLMDGGVRLALE*LGLPAGPHGPGGEQ Trigger: CTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCCTTTTAGGCAGGCCTaGGATGTCCAGGAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: REATHLLPGSYGQGTHHTPFRQA*DVQEML Trigger: GAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAGG...GGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCAACTTGAGGCGAACATaGATGAGGCTGGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVREQTCKRLGHSQEGRPNLRRT*MRLGLG Trigger: TCCCAGCCCCAGCCTCATCAATGTTCGCCTCAAGTT...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCAACTTGAGGCGAACATaGATGAGGCTGGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGNLRRT*MRLGLG Trigger: TCCCAGCCCCAGCCTCATCAATGTTCGCCTCAAGTT...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | GGGGTTAGGGAACAGACATGCAAGAGACTGGGCCACAGCCAGGAGGGAAGACCCATGAGGCTGCCCACGTaGACACCAAGGCTAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVREQTCKRLGHSQEGRPMRLPT*TPRLDC Trigger: GCAATCTAGCCTTGGTGTCAACGTGGGCAGCCTCAT...GGGTCTTCCCTCCTGGCTGTGGCCCAGTCTCTTGCATGTCTGTTCCCTAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCATGAGGCTGCCCACGTaGACACCAAGGCTAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGMRLPT*TPRLDC Trigger: GCAATCTAGCCTTGGTGTCAACGTGGGCAGCCTCAT...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS TCA 90 bp | CAGCTGGTCCACATGGCCCAGGTGGAGAACAGACGTGTCACCTGCTaGCACAATGGTGCCCAGCAGCTGGTTGTTACCACTGTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QLVHMAQVENRRVTC*HNGAQQLVVTTVCY Trigger: GTAGCAGACAGTGGTAACAACCAGCTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCCTGGTCTCTTCAGCCTaGTCATCATTGCCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGLVSSA*SSLPPD Trigger: ATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAG...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGCTGGTCTCTTCAGCCTaGTCATCATTGCCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRLVSSA*SSLPPD Trigger: ATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAG...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTTTTAGGCAGGCCTaGGATGTCCAGGAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EATHLLPGSYGQGTHHTLPFRQA*DVQEML Trigger: GAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAGG...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | GAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCCTTATGAGGCTGCCCACGTaGACACCAAGGCTAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: EATHLLPGSYGQGTHHTLMRLPT*TPRLDC Trigger: GCAATCTAGCCTTGGTGTCAACGTGGGCAGCCTCAT...AAGGGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 90 bp | TGTTCGGTTGGCTCTGGAGTGCCTTGGTTTACCAGCTGGTCCACATaGCCCAGGTGGAGAACAGACGTGTCACCTGCTGACACAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVGSGVPWFTSWST*PRWRTDVSPADTMV Trigger: CACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 90 bp | CTGTCACTGGTCTCTTCAGCCTTGTCATCATTGCCCCCTGATGGATaGGGGTGTTCGGTTGGCTCTGGAGTGCCTTGGTTTACCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVSSALSSLPPDG*GCSVGSGVPWFTSW Trigger: CCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAGTGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS GCA 90 bp | CATGGCCCAGGTGGAGAACAGACGTGTCACCTGCTGACACAATGGTaGCCAGCAGCTGGTTGTTACCACTGTCTGCTACATAGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HGPGGEQTCHLLTQW*PAAGCYHCLLHRWR Trigger: TCTCCACCTATGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCATACCTGGATCACGCAGTTGTaGGTAATGTTCAGGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: REATHLLPGSYGQGTHHTWITQL*VMFREL Trigger: GAGTTCCCTGAACATTACCAACAACTGCGTGATCCA...GGTATGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | ATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGTCCTTGGGCGCCAGGATAAATGTTTaGACTTCGCCAGGACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MDRVPTIPFLSLPPRSLGARINV*TSPGQS Trigger: AGACTGTCCTGGCGAAGTCAAAACATTTATCCTGGC...GCCCAAGGACCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100387.11 |
||
| CDS-3UTR CAA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAGTGTCATTGAGGAACTaGAGGCGAACATTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MKGGHTPASWVLWTGYPPVSLRN*RRTLMR Trigger: CCTCATCAATGTTCGCCTCAAGTTCCTCAATGACAC...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCCTATGGACAGGGTACCCACCATACCCTTCCTATCCCTCCCTCCCAGGCTTCATTTGGCTCTCTaGTCCAGGGAAGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPMDRVPTIPFLSLPPRLHLAL*SREVFA Trigger: AGCAAATACTTCCCTGGACAAGAGAGCCAAATGAAG...CCTGGGAGGGAGGGATAGGAAGGGTATGGTGGGTACCCTGTCCATAGGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 90 bp | GATCACGCAGTTGTTGGTAATGTTCAGGGAACTCAGTGTGCGTGCTaGGTCCTGCAGCAGCCGACCCTGGTAGATCAACTTCATTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DHAVVGNVQGTQCAC*VLQQPTLVDQLHLA Trigger: AGCCAAATGAAGTTGATCTACCAGGGTCGGCTGCTGCAGGACCCAGCACGCACACTGAGTTCCCTGAACATTACCAACAACTGCGTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGGATGGGGGTGTTCGGTaGGCTCTGGAGTGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPHSSKEWKVLEASYRSMDGGVR*ALECLG Trigger: ACCAAGGCACTCCAGAGCCAACCGAACACCCCCATC...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAGGGAGGCCACACACCTGCTTCCTGGGTCCTATGGACAGGGTACCCACCAGTAGATCAACTTCATTaGGCTCTCTTGTCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MKGGHTPASWVLWTGYPPVDQLH*ALLSRE Trigger: TTCCCTGGACAAGAGAGCCAAATGAAGTTGATCTAC...TGGTGGGTACCCTGTCCATAGGACCCAGGAAGCAGGTGTGTGGCCTCCCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGGTGCCCAGCAGCTGGTaGTTACCACTGTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: GPHSSKEWKVLEASYRSMVPSSW*LPLSAT Trigger: TGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCAC...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | ATATCCTCATTTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACGATGGGGGTGTTCGGTaGGCTCTGGAGTGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISSFLPELCLQRYLYPLDDGGVR*ALECLG Trigger: ACCAAGGCACTCCAGAGCCAACCGAACACCCCCATC...GTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAATCAGCCTTGTCATCATaGCCCCCTGATGGATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPLPFLTELYTGLFTNKSALSS*PPDGWG Trigger: CCCCCATCCATCAGGGGGCAATGATGACAAGGCTGA...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAATCAGCCTTGTCATCATaGCCCCCTGATGGATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: APLPFLTELYTGLFTNKQSALSS*PPDGWG Trigger: CCCCCATCCATCAGGGGGCAATGATGACAAGGCTGA...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAAGTGCCCAGCAGCTGGTaGTTACCACTGTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: APLPFLTELYTGLFTNKQVPSSW*LPLSAT Trigger: TGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCAC...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGTGCCCAGCAGCTGGTaGTTACCACTGTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SKGPHSSKEWKVLEASYRVPSSW*LPLSAT Trigger: TGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCAC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | ATATCCTCATTTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACTCAGCCTTGTCATCATaGCCCCCTGATGGATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSFLPELCLQRYLYPLDSALSS*PPDGWG Trigger: CCCCCATCCATCAGGGGGCAATGATGACAAGGCTGA...GTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAACCTTTTAGGCAGGCCTaGGATGTCCAGGAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: APLPFLTELYTGLFTNKQPFRQA*DVQEML Trigger: GAGCATCTCCTGGACATCCAAGGCCTGCCTAAAAGG...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAAAGCTCCTCGGTGTCATaGAGGAACTTGAGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SAPLPFLTELYTGLFTNKSSSVS*RNLRRT Trigger: TGTTCGCCTCAAGTTCCTCAATGACACCGAGGAGCT...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | ATATCCTCATTTCTACCTGAGTTGTGCTTGCAGAGATATCTGTACCCTCTGGACAGCTCCTCGGTGTCATaGAGGAACTTGAGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ISSFLPELCLQRYLYPLDSSSVS*RNLRRT Trigger: TGTTCGCCTCAAGTTCCTCAATGACACCGAGGAGCT...GTCCAGAGGGTACAGATATCTCTGCAAGCACAACTCAGGTAGAAATGAGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGTGGATCACGCAGTTGTaGGTAATGTTCAGGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GPHSSKEWKVLEASYRSMWITQL*VMFREL Trigger: GAGTTCCCTGAACATTACCAACAACTGCGTGATCCA...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCAGTGGATCACGCAGTaGTTGGTAATGTTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPHSSKEWKVLEASYRSMQWITQ*LVMFRE Trigger: TTCCCTGAACATTACCAACAACTGCGTGATCCACTG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTAACTTGAGGCGAACATaGATGAGGCTGGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLNLRRT*MRLGLG Trigger: TCCCAGCCCCAGCCTCATCAATGTTCGCCTCAAGTT...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAGTGTCATTGAGGAACTaGAGGCGAACATTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKGPHSSKEWKVLEASYRVSLRN*RRTLMR Trigger: CCTCATCAATGTTCGCCTCAAGTTCCTCAATGACAC...TCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCACACTCATCTAAGGAGTGGAAGGTACTTGAGGCTTCCTACAGAAGTATGCTTCATTTGGCTCTCTaGTCCAGGGAAGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPHSSKEWKVLEASYRSMLHLAL*SREVFA Trigger: AGCAAATACTTCCCTGGACAAGAGAGCCAAATGAAG...CATACTTCTGTAGGAAGCCTCAAGTACCTTCCACTCCTTAGATGAGTGTGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAACAGTGGATCACGCAGTaGTTGGTAATGTTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: APLPFLTELYTGLFTNKQQWITQ*LVMFRE Trigger: TTCCCTGAACATTACCAACAACTGCGTGATCCACTG...TTGTTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCACTCCCCTTCCTGACTGAGCTCTATACAGGACTATTTACAAACAAACAGTGGATCACGCAGTaGTTGGTAATGTTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAPLPFLTELYTGLFTNKQWITQ*LVMFRE Trigger: TTCCCTGAACATTACCAACAACTGCGTGATCCACTG...TTTGTTTGTAAATAGTCCTGTATAGAGCTCAGTCAGGAAGGGGAGTGGGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTCTGGTCTCTTCAGCCTaGTCATCATTGCCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLLVSSA*SSLPPD Trigger: ATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAG...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTCTTCATTTGGCTCTCTaGTCCAGGGAAGTATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLLHLAL*SREVFA Trigger: AGCAAATACTTCCCTGGACAAGAGAGCCAAATGAAG...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGAATTTAGTTTCAAAAGGTCCACACTCATCTAAGGAGTGGAAGGTACTTGTAGATCAACTTCATTaGGCTCTCTTGTCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVNLVSKGPHSSKEWKVLVDQLH*ALLSRE Trigger: TTCCCTGGACAAGAGAGCCAAATGAAGTTGATCTAC...AAGTACCTTCCACTCCTTAGATGAGTGTGGACCTTTTGAAACTAAATTCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 90 bp | ACTGCTGCCCCTGGGGGTGAGCGGTGGCAGTGGATCACGCAGTTGTaGGTAATGTTCAGGGAACTCAGTGTGCGTGCTGGGTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAAPGGERWQWITQL*VMFRELSVRAGSCS Trigger: GCTGCAGGACCCAGCACGCACACTGAGTTCCCTGAACATTACCAACAACTGCGTGATCCACTGCCACCGCTCACCCCCAGGGGCAGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS GCA 72 bp | CCCCTGATGGATGGGGGTGTTCGGTTGGCTCTGGAGTaGCTTGGTTTACCAGCTGGTCCACATGGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLMDGGVRLALE*LGLPAGPHGPG Trigger: ACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 90 bp | GAAACTGCTGCCCCTGGGGGTGAGCGGTGGCAGTGGATCACGCAGTaGTTGGTAATGTTCAGGGAACTCAGTGTGCGTGCTGGGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ETAAPGGERWQWITQ*LVMFRELSVRAGSC Trigger: GCAGGACCCAGCACGCACACTGAGTTCCCTGAACATTACCAACAACTGCGTGATCCACTGCCACCGCTCACCCCCAGGGGCAGCAGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 72 bp | GATGGATGGGGGTGTTCGGTTGGCTCTGGAGTGCCTTaGTTTACCAGCTGGTCCACATGGCCCAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGWGCSVGSGVP*FTSWSTWPRWR Trigger: TCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 72 bp | CCCTCAATGAGGGTGACATCAGAGAGCTCCATGGCCTaGCTGCTGACTGGGTCCACGCTGACAAAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSMRVTSESSMA*LLTGSTLTKPG Trigger: TCCTGGCTTTGTCAGCGTGGACCCAGTCAGCAGCCAGGCCATGGAGCTCTCTGATGTCACCCTCATTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100387.11 |
||
| CDS CAA 72 bp | CCTGGGGGTGAGCGGTGGCAGTGGATCACGCAGTTGTaGGTAATGTTCAGGGAACTCAGTGTGCGTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGERWQWITQL*VMFRELSVRAG Trigger: CCCAGCACGCACACTGAGTTCCCTGAACATTACCAACAACTGCGTGATCCACTGCCACCGCTCACCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 72 bp | GCCCCTGGGGGTGAGCGGTGGCAGTGGATCACGCAGTaGTTGGTAATGTTCAGGGAACTCAGTGTGCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: APGGERWQWITQ*LVMFRELSVRA Trigger: AGCACGCACACTGAGTTCCCTGAACATTACCAACAACTGCGTGATCCACTGCCACCGCTCACCCCCAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 90 bp | CTTCAGCCTTGTCATCATTGCCCCCTGATGGATGGGGGTGTTCGGTaGGCTCTGGAGTGCCTTGGTTTACCAGCTGGTCCACATGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQPCHHCPLMDGGVR*ALECLGLPAGPHGP Trigger: TGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATGACAAGGCTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS TCA 72 bp | GTCACTGGTCTCTTCAGCCTTGTCATCATTGCCCCCTaGTGGATGGGGGTGTTCGGTTGGCTCTGGAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTGLFSLVIIAP*WMGVFGWLWSA Trigger: GGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | CCAGCAGCTGGTTGTTACCACTGTCTGCTACATAGGTaGAGAGCCAGGCTAGGACCAGGGCTAGAGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PAAGCYHCLLHR*RARLGPGLESA Trigger: CGCTGACTCTAGCCCTGGTCCTAGCCTGGCTCTCCACCTATGTAGCAGACAGTGGTAACAACCAGCTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | CTCCAGGTTCTCCAGTGGCGTCTCCCCCACTGTCACTaGTCTCTTCAGCCTTGTCATCATTGCCCCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQVLQWRLPHCH*SLQPCHHCPLM Trigger: CATCAGGGGGCAATGATGACAAGGCTGAAGAGACCAGTGACAGTGGGGGAGACGCCACTGGAGAACCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CCA 72 bp | CCAGAAACTGCTGCCCCTGGGGGTGAGCGGTGGCAGTaGATCACGCAGTTGTTGGTAATGTTCAGGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: PETAAPGGERWQ*ITQLLVMFREL Trigger: GAGTTCCCTGAACATTACCAACAACTGCGTGATCCACTGCCACCGCTCACCCCCAGGGGCAGCAGTTTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 72 bp | CTGGCCACAGCTAGCTCCTCGGTGTCATTGAGGAACTaGAGGCGAACATTGATGAGGCTGGGGCTGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LATASSSVSLRN*RRTLMRLGLGE Trigger: CTCTCCCAGCCCCAGCCTCATCAATGTTCGCCTCAAGTTCCTCAATGACACCGAGGAGCTAGCTGTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 90 bp | ACACCCAAGAGCACCACAAACACAGGCACCATGAGGCTGCCCACGTaGACACCAAGGCTAGATTGCTCAGTGGTTGGGGTCAAGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPKSTTNTGTMRLPT*TPRLDCSVVGVKEA Trigger: AGCCTCCTTGACCCCAACCACTGAGCAATCTAGCCTTGGTGTCAACGTGGGCAGCCTCATGGTGCCTGTGTTTGTGGTGCTCTTGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS TCA 72 bp | CACATGGCCCAGGTGGAGAACAGACGTGTCACCTGCTaGCACAATGGTGCCCAGCAGCTGGTTGTTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: HMAQVENRRVTC*HNGAQQLVVTT Trigger: AGTGGTAACAACCAGCTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | GTGCCTTGGTTTACCAGCTGGTCCACATGGCCCAGGTaGAGAACAGACGTGTCACCTGCTGACACAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPWFTSWSTWPR*RTDVSPADTMV Trigger: CACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | TGTTCGGTTGGCTCTGGAGTGCCTTGGTTTACCAGCTaGTCCACATGGCCCAGGTGGAGAACAGACGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSVGSGVPWFTS*STWPRWRTDVS Trigger: TGACACGTCTGTTCTCCACCTGGGCCATGTGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CAA 72 bp | TGTCATCATTGCCCCCTGATGGATGGGGGTGTTCGGTaGGCTCTGGAGTGCCTTGGTTTACCAGCTGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CHHCPLMDGGVR*ALECLGLPAGP Trigger: TGGACCAGCTGGTAAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CAA 72 bp | AGCACCACAAACACAGGCACCATGAGGCTGCCCACGTaGACACCAAGGCTAGATTGCTCAGTGGTTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: STTNTGTMRLPT*TPRLDCSVVGV Trigger: GACCCCAACCACTGAGCAATCTAGCCTTGGTGTCAACGTGGGCAGCCTCATGGTGCCTGTGTTTGTGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | CCCTCAATGAGGGTGACATCAGAGAGCTCCATGGCCTaGCTGCTGACTGGGTCCACGCTCATAAGGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSMRVTSESSMA*LLTGSTLIRLF Trigger: AAACAACCTTATGAGCGTGGACCCAGTCAGCAGCCAGGCCATGGAGCTCTCTGATGTCACCCTCATTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036376.13 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | GTCTCTTCAGCCTTGTCATCATTGCCCCCTGATGGATaGGGGTGTTCGGTTGGCTCTGGAGTGCCTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VSSALSSLPPDG*GCSVGSGVPWF Trigger: AAACCAAGGCACTCCAGAGCCAACCGAACACCCCCATCCATCAGGGGGCAATGATGACAAGGCTGAAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS GCA 72 bp | GGTGGAGAACAGACGTGTCACCTGCTGACACAATGGTaGCCAGCAGCTGGTTGTTACCACTGTCTGCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GGEQTCHLLTQW*PAAGCYHCLLH Trigger: ATGTAGCAGACAGTGGTAACAACCAGCTGCTGGGCACCATTGTGTCAGCAGGTGACACGTCTGTTCTCCACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
||
| CDS CCA 72 bp | GTTGTTGGTAATGTTCAGGGAACTCAGTGTGCGTGCTaGGTCCTGCAGCAGCCGACCCTGGTAGATCAACTT | + |
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Preference number: 6 (lower is better) Translates to: VVGNVQGTQCAC*VLQQPTLVDQL Trigger: AAGTTGATCTACCAGGGTCGGCTGCTGCAGGACCCAGCACGCACACTGAGTTCCCTGAACATTACCAACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS GCA 72 bp | TCAACTTCATTTGGCTCTCTTGTCCAGGGAAGTATTTaGTTTTTAGGGTACCCACAGTGTCCTCTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: STSFGSLVQGSI*FLGYPQCPLAW Trigger: CCAGGCCAGAGGACACTGTGGGTACCCTAAAAAGCAAATACTTCCCTGGACAAGAGAGCCAAATGAAGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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| CDS CAA 72 bp | ATCAACTTCATTTGGCTCTCTTGTCCAGGGAAGTATTaGCTTTTTAGGGTACCCACAGTGTCCTCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: INFIWLSCPGKY*LFRVPTVSSGL Trigger: CAGGCCAGAGGACACTGTGGGTACCCTAAAAAGCAAATACTTCCCTGGACAAGAGAGCCAAATGAAGTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036376.13 ENSMUST00000100387.11 ENSMUST00000156326.2 |
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