Pregenerated sensors for TMUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028958Ensembl transcript IDs: ENSMUST00000030799.15, ENSMUST00000115033.8, ENSMUST00000115036.8, ENSMUST00000123167.2, ENSMUST00000127194.2, ENSMUST00000238335.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTaGTCCAGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AHWGALAAKAATASA*SRRAHCQRRLRSSS Trigger: GCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR GCA 90 bp | ATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTaGCTGATCCAGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: MGPLGCPGGQGSDSK*LIQKSPLPAKAEVQ Trigger: CTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CCA 90 bp | GGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGTGGGCCTaGGCAGACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GSRVVGKDRQRVKWA*ADSSSLCALGNEVQ Trigger: CTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTCTGCCCAGGCCCACTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR GCA 90 bp | TATGAAGATCACACGGAGCGGCCTCCGCTAACACCCGAAGTCCTCTaGGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YEDHTERPPLTPEVL*GAKLGSRVVGKDRQ Trigger: CTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGCGGAGGCCGCTCCGTGTGATCTTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR GCA 90 bp | AACGTCACAGTTTCTTTAATCTGCACAAATTCCAGAAAACAACTCTaGCCCTCTCGATTCCCCTTCACCAGTCTCCCAGTCCACCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NVTVSLICTNSRKQL*PSRFPFTSLPVHQF Trigger: AAACTGGTGGACTGGGAGACTGGTGAAGGGGAATCGAGAGGGGCAGAGTTGTTTTCTGGAATTTGTGCAGATTAAAGAAACTGTGACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGACTGCCAGCGAAGGCTaGGGTCCAGCAGCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GPLGCPGGQGSDSKCLIQTASEG*GPAAPG Trigger: TCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGT...CTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGAGGCAGCGGGTGAAGTaGGCCTGGGCAGACAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GPLGCPGGQGSDSKCLIQRQRVK*AWADSS Trigger: GCTGCTGTCTGCCCAGGCCCACTTCACCCGCTGCCT...CTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCAGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCAGGCAGCGGGTGAAGTaGGCCTGGGCAGACAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LCQHTKMGPLGCPGGQGSRQRVK*AWADSS Trigger: GCTGCTGTCTGCCCAGGCCCACTTCACCCGCTGCCT...GCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCTTGCGCCTTGGGGAATaGGGTCCAGAGGGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TKMGPLGCPGGQGSDSKCLRLGE*GPEGLA Trigger: AGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAA...GCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCAGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGAAGACAGGCAGCGGGTaGAGTGGGCCTGGGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SVSTLRWAHWGALAAKAAKTGSG*SGPGQT Trigger: TGTCTGCCCAGGCCCACTTCACCCGCTGCCTGTCTT...CGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAAGACAGGCAGCGGGTaGAGTGGGCCTGGGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: STLRWAHWGALAAKAATAKTGSG*SGPGQT Trigger: TGTCTGCCCAGGCCCACTTCACCCGCTGCCTGTCTT...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAATTGCGCCTTGGGGAATaGGGTCCAGAGGGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ANTRSPLRRKAGLQGSGKLRLGE*GPEGLA Trigger: AGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAA...TTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR TCA 90 bp | ACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACTTGCGCCTTGGGGAATaGGGTCCAGAGGGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TPEVLCGAKLGSRVVGKDLRLGE*GPEGLA Trigger: AGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAA...GTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGAGGGGCTGGCTACACTaGCAAAAGCCCGTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PEVLCGAKLGSRVVGKDRRGWLH*QKPVEA Trigger: TGCCTCCACGGGCTTTTGGCAGTGTAGCCAGCCCCT...CCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGAGGGGCTGGCTACACTaGCAAAAGCCCGTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKRGWLH*QKPVEA Trigger: TGCCTCCACGGGCTTTTGGCAGTGTAGCCAGCCCCT...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTAGAGACAGCAGCTCCCTTTaGGCCTTGGGGAATGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RAHCQRRLRSSSPRRWPRDSSSL*ALGNEV Trigger: GACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTC...TCTAGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGGGCTGGCTACACTaGCAAAAGCCCGTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TPEVLCGAKLGSRVVGKDRGWLH*QKPVEA Trigger: TGCCTCCACGGGCTTTTGGCAGTGTAGCCAGCCCCT...GTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCAGCAGCCCCAGGAGATaGCCTAGAGCTATGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: LRWAHWGALAAKAATASASSPRR*PRAMKI Trigger: GATCTTCATAGCTCTAGGCCATCTCCTGGGGCTGCT...GGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGAAAGCAGCCCCAGGAGATaGCCTAGAGCTATGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: PIGVPWRPRQRQQVPDPESSPRR*PRAMKI Trigger: GATCTTCATAGCTCTAGGCCATCTCCTGGGGCTGCT...TTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | CTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGCAGCTCCCTTTaGGCCTTGGGGAATGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LTPEVLCGAKLGSRVVGKDSSSL*ALGNEV Trigger: GACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTC...TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAGGCAGCGACAGCAAGTaGCTGATCCAGAAGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLPVHQFPIQPRQLFETRGSDSK*LIQKSP Trigger: TGGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCC...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR GCA 72 bp | CACACGGAGCGGCCTCCGCTAACACCCGAAGTCCTCTaGGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: HTERPPLTPEVL*GAKLGSRVVGK Trigger: TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGCGGAGGCCGCTCCGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR TCA 72 bp | GTGCCTGATCCAGAAGAGCCCACTGCCAGCGAAGGCTaGGGTCCAGCAGCCCCAGGAGATGGCCTAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: VPDPEEPTASEG*GPAAPGDGLEL Trigger: TAGCTCTAGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCTGGATCAGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CCA 72 bp | TGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATaGCCTAGAGCTATGAAGATCACACGGAGCGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CQRRLRSSSPRR*PRAMKITRSGL Trigger: GAGGCCGCTCCGTGTGATCTTCATAGCTCTAGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CCA 72 bp | GTAGTGGGAAAAGACAGGCAGCGGGTGAAGTGGGCCTaGGCAGACAGCAGCTCCCTTTGCGCCTTGGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VVGKDRQRVKWA*ADSSSLCALGN Trigger: ATTCCCCAAGGCGCAAAGGGAGCTGCTGTCTGCCCAGGCCCACTTCACCCGCTGCCTGTCTTTTCCCACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CCA 72 bp | TCTAGATCCTCTGTCAGCACACTAAGATGGGCCCATTaGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: SRSSVSTLRWAH*GALAAKAATAS Trigger: ACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAGGATCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CCA 72 bp | CTAGAAGTATCTAGATCCTCTGTCAGCACACTAAGATaGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: LEVSRSSVSTLR*AHWGALAAKAA Trigger: CGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAGGATCTAGATACTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | GGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGAAGAGCCCGCTGTGCTGGTGTTGTaGTCCCCGGCGGCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GVPWRPRQRQQVPDPEEPAVLVL*SPAAVV Trigger: AACCACAGCCGCCGGGGACCACAACACCAGCACAGC...GGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTCAGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: LCQHTKMGPLGCPGGQGSEPMVS*GQALAT Trigger: GGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTC...GCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR TCA 90 bp | CCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: PLRRKAGLQGSGKRQAAGEPMVS*GQALAT Trigger: GGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTC...ACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR TCA 90 bp | GGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGGAGGTGTTGATGCTGTaGCCCCTGTGTCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GPLGCPGGQGSDSKCLIQEVLML*PLCQAL Trigger: CAGAGCCTGACACAGGGGTCACAGCATCAACACCTC...CTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR GCA 90 bp | CCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGGCTTCACTGGGCTGTaGTGGTGTTGTGGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLRRKAGLQGSGKRQAAGGFTGL*WCCGPR Trigger: CCGGGGACCACAACACCAGCACAGCCCAGTGAAGCC...ACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR GCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAGGCTTCACTGGGCTGTaGTGGTGTTGTGGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: STLRWAHWGALAAKAATAGFTGL*WCCGPR Trigger: CCGGGGACCACAACACCAGCACAGCCCAGTGAAGCC...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR GCA 90 bp | AGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTGGGGCAACAGAAGGCTaGCGATTTCCAGCCCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RRAHCQRRLRSSSPRRWPGATEG*RFPARR Trigger: CCTCCGGGCTGGAAATCGGCAGCCTTCTGTTGCCCC...AGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | CCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGAAGCTGTGCTGGTGTTGTaGTCCCCGGCGGCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: PIGVPWRPRQRQQVPDPEAVLVL*SPAAVV Trigger: AACCACAGCCGCCGGGGACCACAACACCAGCACAGC...TTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAGCTGTGCTGGTGTTGTaGTCCCCGGCGGCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: STLRWAHWGALAAKAATAAVLVL*SPAAVV Trigger: AACCACAGCCGCCGGGGACCACAACACCAGCACAGC...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | ACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTCTGTGTCTCAGGCTaGGACTCTCAGCCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TKMGPLGCPGGQGSDSKCLCVSG*DSQPLG Trigger: CCCCAGGGGCTGAGAGTCCCAGCCTGAGACACAGAG...GCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCATGGGCAGGGAGGATGTaGGGGACCGACTCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: STLRWAHWGALAAKAATAWAGRM*GTDSRG Trigger: TCCACGAGAGTCGGTCCCCCACATCCTCCCTGCCCA...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| 3UTR CAA 72 bp | AAGTGGGCCTGGGCAGACAGCAGCTCCCTTTGCGCCTaGGGGAATGAGGTCCAGAGGGGCTGGCTACACTGC | + |
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Preference number: 4 (lower is better) Translates to: KWAWADSSSLCA*GNEVQRGWLHC Trigger: GCAGTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTCTGCCCAGGCCCACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAGAGGGGCTGGCTACACTGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: TAAPFAPWGMRSRGAGYTEPMVS*GQALAT Trigger: GGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTC...AGTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR GCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGGGCTTCACTGGGCTGTaGTGGTGTTGTGGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKGFTGL*WCCGPR Trigger: CCGGGGACCACAACACCAGCACAGCCCAGTGAAGCC...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | CCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCTCTGTGTCTCAGGCTaGGACTCTCAGCCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PEVLCGAKLGSRVVGKDRLCVSG*DSQPLG Trigger: CCCCAGGGGCTGAGAGTCCCAGCCTGAGACACAGAG...CCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
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| CDS-3UTR CCA 90 bp | GACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAGAGGGGCTGGCTACACCTCTGTGTCTCAGGCTaGGACTCTCAGCCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSSLCALGNEVQRGWLHLCVSG*DSQPLG Trigger: CCCCAGGGGCTGAGAGTCCCAGCCTGAGACACAGAG...GTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCACCTGAGGCCAGGCCCTaGCTACCTGCTCAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STLRWAHWGALAAKAATAPEARP*LPAQSH Trigger: ATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGG...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGACTCTCGTGGACACGTaGCAGTGGAGAACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGCPGGQGSDSKCLIQTLVDT*QWRTQL Trigger: CAACTGCGTTCTCCACTGCCACGTGTCCACGAGAGT...CTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGTGGGCAGGGAGGATGTaGGGGACCGACTCTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKWAGRM*GTDSRG Trigger: TCCACGAGAGTCGGTCCCCCACATCCTCCCTGCCCA...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCAGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGGATGCTGTCAGAGGCTaGCATGGCTTCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSTLRWAHWGALAAKAADAVRG*HGFTGL Trigger: CAGCCCAGTGAAGCCATGTCAGCCTCTGACAGCATC...CGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTGATCCAGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGGTGTTGATGCTGTaGCCCCTGTGTCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLIQKSPLPAKAEVQQPQEVLML*PLCQAL Trigger: CAGAGCCTGACACAGGGGTCACAGCATCAACACCTC...CTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCTGGATCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGAAGAGCCCGTTGACCTTGGTAGATaGGCCGAACCTGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPWRPRQRQQVPDPEEPVDLGR*AEPAVP Trigger: AGGAACAGCAGGTTCGGCTCATCTACCAAGGTCAAC...GGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | GCTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAGGGGCAACAGAAGGCTaGCGATTTCCAGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANTRSPLRRKAGLQGSGKGATEG*RFPARR Trigger: CCTCCGGGCTGGAAATCGGCAGCCTTCTGTTGCCCC...TTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAACCTGAGGCCAGGCCCTaGCTACCTGCTCAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRKAGLQGSGKRQAAGEPEARP*LPAQSH Trigger: ATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGG...TTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCCTGATCCAGTTTTTAAGGAGCCAATaGTGTCCTGAGGCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGCPGGQGSDSKCLIQFLRSQ*CPEARP Trigger: GGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAA...CTGGATCAGGCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | CTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGGGGCAACAGAAGGCTaGCGATTTCCAGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPEVLCGAKLGSRVVGKGATEG*RFPARR Trigger: CCTCCGGGCTGGAAATCGGCAGCCTTCTGTTGCCCC...TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTCTGACATGGCTTCACTaGGCTGTGCTGGTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRAHCQRRLRSSSPRRWPLTWLH*AVLVLW Trigger: CCACAACACCAGCACAGCCCAGTGAAGCCATGTCAG...AGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCTGTCAGAGGCTGACATaGCTTCACTGGGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKMGPLGCPGGQGSDSKCCQRLT*LHWAVL Trigger: CAGCACAGCCCAGTGAAGCCATGTCAGCCTCTGACA...GCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTTGTCAGAGGCTGACATaGCTTCACTGGGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRRKAGLQGSGKRQAAGCQRLT*LHWAVL Trigger: CAGCACAGCCCAGTGAAGCCATGTCAGCCTCTGACA...ACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCACGAACCTGCTGTTCCTaGCCTGGAAACTGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STLRWAHWGALAAKAATARTCCS*PGNWVL Trigger: AAGGACCCAGTTTCCAGGCCAGGAACAGCAGGTTCG...TGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTACTCTCGTGGACACGTaGCAGTGGAGAACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRAHCQRRLRSSSPRRWPTLVDT*QWRTQL Trigger: CAACTGCGTTCTCCACTGCCACGTGTCCACGAGAGT...AGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | GCTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAGGGGACCGACTCTCGTaGACACGTGGCAGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ANTRSPLRRKAGLQGSGKGDRLS*TRGSGE Trigger: TTCTCCACTGCCACGTGTCCACGAGAGTCGGTCCCC...TTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRAHCQRRLRSSSPRRWPKKGRY*IWQYQS Trigger: GCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTT...AGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCGTTGACCTTGGTAGATaGGCCGAACCTGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKMGPLGCPGGQGSDSKCVDLGR*AEPAVP Trigger: AGGAACAGCAGGTTCGGCTCATCTACCAAGGTCAAC...GCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCAGCACACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCAGAAGTAGGGGTTCCTaGGGAGAGTCTGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCQHTKMGPLGCPGGQGSRSRGS*GESGGV Trigger: AACACCTCCAGACTCTCCGCAGGAACCCCTACTTCT...GCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCTCTGGCTGTGCAGATaGACCTCTGTGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVLCGAKLGSRVVGKDRLWLCR*TSVSQA Trigger: AGCCTGAGACACAGAGGTCCATCTGCACAGCCAGAG...CCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAACTCTGGCTGTGCAGATaGACCTCTGTGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRKAGLQGSGKRQAAGELWLCR*TSVSQA Trigger: AGCCTGAGACACAGAGGTCCATCTGCACAGCCAGAG...TTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGCTCTGGCTGTGCAGATaGACCTCTGTGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKLWLCR*TSVSQA Trigger: AGCCTGAGACACAGAGGTCCATCTGCACAGCCAGAG...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAACTCTCGTGGACACGTaGCAGTGGAGAACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRKAGLQGSGKRQAAGETLVDT*QWRTQL Trigger: CAACTGCGTTCTCCACTGCCACGTGTCCACGAGAGT...TTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAGAGGGGCTGGCTACACTAGAGTCTGGAGGTGTTaGTGCTGTGACCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPFAPWGMRSRGAGYTRVWRC*CCDPCV Trigger: GACACAGGGGTCACAGCATCAACACCTCCAGACTCT...AGTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | CCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGGTTGACCTTGGTAGATaGGCCGAACCTGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVLCGAKLGSRVVGKDRVDLGR*AEPAVP Trigger: AGGAACAGCAGGTTCGGCTCATCTACCAAGGTCAAC...CCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTAGACAGGCCCTGGCTACCTaGTCAGAGTCATTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RAHCQRRLRSSSPRRWPRQALAT*SESLRN Trigger: ATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTG...TCTAGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | ACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACTGTCAGAGGCTGACATaGCTTCACTGGGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPEVLCGAKLGSRVVGKDCQRLT*LHWAVL Trigger: CAGCACAGCCCAGTGAAGCCATGTCAGCCTCTGACA...GTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | GCTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAACGAACCTGCTGTTCCTaGCCTGGAAACTGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANTRSPLRRKAGLQGSGKRTCCS*PGNWVL Trigger: AAGGACCCAGTTTCCAGGCCAGGAACAGCAGGTTCG...TTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAGAGGGGCTGGCTACACTAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPFAPWGMRSRGAGYTKKGRY*IWQYQS Trigger: GCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTT...AGTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR TCA 90 bp | CTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAAGAGTCTGGAGGTGTTaGTGCTGTGACCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPEVLCGAKLGSRVVGKRVWRC*CCDPCV Trigger: GACACAGGGGTCACAGCATCAACACCTCCAGACTCT...TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAACAGGCCCTGGCTACCTaGTCAGAGTCATTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRKAGLQGSGKRQAAGEQALAT*SESLRN Trigger: ATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTG...TTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR GCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGCAGGCCCTGGCTACCTaGTCAGAGTCATTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKQALAT*SESLRN Trigger: ATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTG...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCTCCCTTTGCGCCTTGGGGAATGAGGTCCAGAGGGGCTGGCTACACTTTTTTAAGGAGCCAATaGTGTCCTGAGGCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPFAPWGMRSRGAGYTFLRSQ*CPEARP Trigger: GGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAA...AGTGTAGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACAGGCAGCGGGTGAAGTCCTGGCCTGGAAACTaGGTCCTTTTTAAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGAKLGSRVVGKDRQRVKSWPGN*VLFKEP Trigger: TGGCTCCTTAAAAAGGACCCAGTTTCCAGGCCAGGA...CTTCACCCGCTGCCTGTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAACGAACCTGCTGTTCCTaGCCTGGAAACTGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTPEVLCGAKLGSRVVGKRTCCS*PGNWVL Trigger: AAGGACCCAGTTTCCAGGCCAGGAACAGCAGGTTCG...TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPEVLCGAKLGSRVVGKKKGRY*IWQYQS Trigger: GCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTT...TTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | GCTAACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAATCCTGGCCTGGAAACTaGGTCCTTTTTAAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANTRSPLRRKAGLQGSGKSWPGN*VLFKEP Trigger: TGGCTCCTTAAAAAGGACCCAGTTTCCAGGCCAGGA...TTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGTTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAAGGCAGCGGGTGAAGTaGGCCTGGGCAGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLRQRVK*AWADSS Trigger: GCTGCTGTCTGCCCAGGCCCACTTCACCCGCTGCCT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETREPMVS*GQALAT Trigger: GGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTC...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTATTGCGCCTTGGGGAATaGGGTCCAGAGGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLLRLGE*GPEGLA Trigger: AGCCAGCCCCTCTGGACCTCATTCCCCAAGGCGCAA...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAACTGCCAGCGAAGGCTaGGGTCCAGCAGCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRTASEG*GPAAPG Trigger: TCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGT...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGGGGCAACAGAAGGCTaGCGATTTCCAGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLGATEG*RFPARR Trigger: CCTCCGGGCTGGAAATCGGCAGCCTTCTGTTGCCCC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGCTGTGCTGGTGTTGTaGTCCCCGGCGGCTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLAVLVL*SPAAVV Trigger: AACCACAGCCGCCGGGGACCACAACACCAGCACAGC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTACTCTGTGTCTCAGGCTaGGACTCTCAGCCCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLLCVSG*DSQPLG Trigger: CCCCAGGGGCTGAGAGTCCCAGCCTGAGACACAGAG...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTATGGGCAGGGAGGATGTaGGGGACCGACTCTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLWAGRM*GTDSRG Trigger: TCCACGAGAGTCGGTCCCCCACATCCTCCCTGCCCA...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAAAGACAGGCAGCGGGTaGAGTGGGCCTGGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRKTGSG*SGPGQT Trigger: TGTCTGCCCAGGCCCACTTCACCCGCTGCCTGTCTT...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAGGCTTCACTGGGCTGTaGTGGTGTTGTGGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRGFTGL*WCCGPR Trigger: CCGGGGACCACAACACCAGCACAGCCCAGTGAAGCC...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAAGGGGCTGGCTACACTaGCAAAAGCCCGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLRGWLH*QKPVEA Trigger: TGCCTCCACGGGCTTTTGGCAGTGTAGCCAGCCCCT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTACCTGAGGCCAGGCCCTaGCTACCTGCTCAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLPEARP*LPAQSH Trigger: ATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGG...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGATGCTGTCAGAGGCTaGCATGGCTTCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLDAVRG*HGFTGL Trigger: CAGCCCAGTGAAGCCATGTCAGCCTCTGACAGCATC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGACAGCAGCTCCCTTTaGGCCTTGGGGAATGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLDSSSL*ALGNEV Trigger: GACCTCATTCCCCAAGGCGCAAAGGGAGCTGCTGTC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGGCAGCGACAGCAAGTaGCTGATCCAGAAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLGSDSK*LIQKSP Trigger: TGGGCTCTTCTGGATCAGGCACTTGCTGTCGCTGCC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAGGGGACCGACTCTCGTaGACACGTGGCAGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRGDRLS*TRGSGE Trigger: TTCTCCACTGCCACGTGTCCACGAGAGTCGGTCCCC...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTACTGCTGTTCCTGGCCTaGAAACTGGGTCCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLLLFLA*KLGPEE Trigger: CTCCTCAGGACCCAGTTTCCAGGCCAGGAACAGCAG...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAACTGCCAAAAGCCCGTaGAGGCACTACGGCCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLTAKSP*RHYGRY Trigger: GTATCGGCCGTAGTGCCTCCACGGGCTTTTGGCAGT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAGATGCTGTCAGAGGCTaGCATGGCTTCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRDAVRG*HGFTGL Trigger: CAGCCCAGTGAAGCCATGTCAGCCTCTGACAGCATC...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAACTCTCGTGGACACGTaGCAGTGGAGAACGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLTLVDT*QWRTQL Trigger: CAACTGCGTTCTCCACTGCCACGTGTCCACGAGAGT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLKKGRY*IWQYQS Trigger: GCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGACGAACCTGCTGTTCCTaGCCTGGAAACTGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRRTCCS*PGNWVL Trigger: CAGGACCCAGTTTCCAGGCCAGGAACAGCAGGTTCG...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGAAGAGTCTGGAGGTGTTaGTGCTGTGACCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRRVWRC*CCDPCV Trigger: GACACAGGGGTCACAGCATCAACACCTCCAGACTCT...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGTTGACCTTGGTAGATaGGCCGAACCTGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLVDLGR*AEPAVP Trigger: AGGAACAGCAGGTTCGGCTCATCTACCAAGGTCAAC...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGATGTCAGAGGCTGACATaGCTTCACTGGGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRCQRLT*LHWAVL Trigger: CAGCACAGCCCAGTGAAGCCATGTCAGCCTCTGACA...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGACTCTGGCTGTGCAGATaGACCTCTGTGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRLWLCR*TSVSQA Trigger: AGCCTGAGACACAGAGGTCCATCTGCACAGCCAGAG...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAAGCAGCCCCAGGAGATaGCCTAGAGCTATGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLSSPRR*PRAMKI Trigger: GATCTTCATAGCTCTAGGCCATCTCCTGGGGCTGCT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGACTGGAAACTGGGTCCTaGGGAGAGAGGGACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRLETGS*GERDLF Trigger: AAAAAGGTCCCTCTCTCCTCAGGACCCAGTTTCCAG...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTACAGGCCCTGGCTACCTaGTCAGAGTCATTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLQALAT*SESLRN Trigger: ATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTG...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGATTTTTAAGGAGCCAATaGTGTCCTGAGGCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRFLRSQ*CPEARP Trigger: GGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAA...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAGATCCTGGCCTGGAAACTaGGTCCTTTTTAAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVHQFPIQPRQLFETRSWPGN*VLFKEP Trigger: TGGCTCCTTAAAAAGGACCCAGTTTCCAGGCCAGGA...TCTAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS TCA 90 bp | CCCCGGCGGCTGTGGTTGGGGGTCTGTACTCTCAGTGGTATGTGTTaGGACCCAGGCGAGGGCCAGCACCAGAAGGCAAGCAAGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRLWLGVCTLSGMC*DPGEGQHQKASKHR Trigger: GCGGTGCTTGCTTGCCTTCTGGTGCTGGCCCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAGCCGCCGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
||
| CDS CCA 90 bp | CCGGCCAGACCCAGGGTAGCGGTCAGGGGAAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGCAGGAGCAGCAGCAGAAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PARPRVAVRGKKGRY*IWQYQSRSSSRSSR Trigger: CCTGCTGCTTCTGCTGCTGCTCCTGCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTTTCCCCTGACCGCTACCCTGGGTCTGGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS CCA 90 bp | GTGTTGTGGTCCCCGGCGGCTGTGGTTGGGGGTCTGTACTCTCAGTaGTATGTGTTGAGACCCAGGCGAGGGCCAGCACCAGAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLWSPAAVVGGLYSQ*YVLRPRRGPAPEGK Trigger: CTTGCCTTCTGGTGCTGGCCCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAGCCGCCGGGGACCACAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
||
| CDS CCA 90 bp | GCTTCACTGGGCTGTGCTGGTGTTGTGGTCCCCGGCGGCTGTGGTTaGGGGTCTGTACTCTCAGTGGTATGTGTTGAGACCCAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLGCAGVVVPGGCG*GSVLSVVCVETQAR Trigger: CCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAGCCGCCGGGGACCACAACACCAGCACAGCCCAGTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
||
| CDS CCA 90 bp | AGACCCAGGGTAGCGGTCAGGGGAAAGAAGGGCCGGTACTGGATCTaGCAGTACCAGAGCAGGAGCAGCAGCAGAAGCAGCAGGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPRVAVRGKKGRYWI*QYQSRSSSRSSRGN Trigger: GTTGCCCCTGCTGCTTCTGCTGCTGCTCCTGCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTTTCCCCTGACCGCTACCCTGGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCCACTGCCAGCGAAGGCTGAGGTCCAGCAGCCCCAGGAGATGGCCTTCTCAGTGGTATGTGTaGAGACCCAGGCGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRAHCQRRLRSSSPRRWPSQWYV*RPRRGP Trigger: TGGCCCTCGCCTGGGTCTCAACACATACCACTGAGA...AGGCCATCTCCTGGGGCTGCTGGACCTCAGCCTTCGCTGGCAGTGGGCTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS-3UTR CAA 90 bp | ACACCCGAAGTCCTCTGCGGCGCAAAGCTGGGCTCCAGGGTAGTGGGAAAAGACTCTCAGTGGTATGTGTaGAGACCCAGGCGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPEVLCGAKLGSRVVGKDSQWYV*RPRRGP Trigger: TGGCCCTCGCCTGGGTCTCAACACATACCACTGAGA...GTCTTTTCCCACTACCCTGGAGCCCAGCTTTGCGCCGCAGAGGACTTCGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS TCA 90 bp | GTAGAAGTAGGGGTTCCTGCGGAGAGTCTGGAGGTGTTGATGCTGTaGCCCCTGTGTCAGGCTCTGGCTGTGCAGATGGACCTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VEVGVPAESLEVLML*PLCQALAVQMDLCV Trigger: GACACAGAGGTCCATCTGCACAGCCAGAGCCTGACACAGGGGTCACAGCATCAACACCTCCAGACTCTCCGCAGGAACCCCTACTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
||
| CDS-3UTR CAA 90 bp | ACTAAGATGGGCCCATTGGGGTGCCCTGGCGGCCAAGGCAGCGACAGCAAGTGCACCTGCTCAGAGTCATaGAGAAATTTCAACCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKMGPLGCPGGQGSDSKCTCSES*RNFNRR Trigger: TCTACGGTTGAAATTTCTCAATGACTCTGAGCAGGT...GCACTTGCTGTCGCTGCCTTGGCCGCCAGGGCACCCCAATGGGCCCATCTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 |
||
| CDS TCA 90 bp | CAATGGTGTCCTGAGGCCAGGCCCTGGCTACCTGCTCAGAGTCATTaGGAAATTTCAACCGTAGAAGTAGGGGTTCCTGCGGAGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QWCPEARPWLPAQSH*EISTVEVGVPAESL Trigger: CAGACTCTCCGCAGGAACCCCTACTTCTACGGTTGAAATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGGACACCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000127194.2 ENSMUST00000238335.2 |
||
| CDS TCA 90 bp | TCCTGGCCTGGAAACTGGGTCCTTTTTAAGGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACCTGCTCAGAGTCATTGAGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWPGNWVLFKEPMVS*GQALATCSESLRNF Trigger: GAAATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAAGGACCCAGTTTCCAGGCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000127194.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTATCTCAGTGGTATGTGTaGAGACCCAGGCGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLSQWYV*RPRRGP Trigger: TGGCCCTCGCCTGGGTCTCAACACATACCACTGAGA...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
||
| CDS GCA 90 bp | TGCTCAGAGTCATTGAGAAATTTCAACCGTAGAAGTAGGGGTTCCTaGGGAGAGTCTGGAGGTGTTGATGCTGTGACCCCTGTGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSESLRNFNRRSRGS*GESGGVDAVTPVSG Trigger: GCCTGACACAGGGGTCACAGCATCAACACCTCCAGACTCTCCGCAGGAACCCCTACTTCTACGGTTGAAATTTCTCAATGACTCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS-3UTR CAA 90 bp | CCAGTCTCCCAGTCCACCAGTTTCCAATTCAGCCTAGGCAGCTCTTTGAAACTAACCTGCTCAGAGTCATaGAGAAATTTCAACCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PVSQSTSFQFSLGSSLKLTCSES*RNFNRR Trigger: TCTACGGTTGAAATTTCTCAATGACTCTGAGCAGGT...TAGTTTCAAAGAGCTGCCTAGGCTGAATTGGAAACTGGTGGACTGGGAGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
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| CDS CAA 90 bp | TCCCCGGCGGCTGTGGTTGGGGGTCTGTACTCTCAGTGGTATGTGTaGAGACCCAGGCGAGGGCCAGCACCAGAAGGCAAGCAAGCACCG | + |
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Preference number: 6 (lower is better) Translates to: SPAAVVGGLYSQWYV*RPRRGPAPEGKQAP Trigger: CGGTGCTTGCTTGCCTTCTGGTGCTGGCCCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAGCCGCCGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS CCA 72 bp | AGGCTGACATGGCTTCACTGGGCTGTGCTGGTGTTGTaGTCCCCGGCGGCTGTGGTTGGGGGTCTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: RLTWLHWAVLVL*SPAAVVGGLYS Trigger: AGAGTACAGACCCCCAACCACAGCCGCCGGGGACCACAACACCAGCACAGCCCAGTGAAGCCATGTCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS CCA 72 bp | TGCTGTGACCCCTGTGTCAGGCTCTGGCTGTGCAGATaGACCTCTGTGTCTCAGGCTGGGACTCTCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CCDPCVRLWLCR*TSVSQAGTLSP Trigger: GGGGCTGAGAGTCCCAGCCTGAGACACAGAGGTCCATCTGCACAGCCAGAGCCTGACACAGGGGTCACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS CCA 72 bp | CCCAGGGTAGCGGTCAGGGGAAAGAAGGGCCGGTACTaGATCTGGCAGTACCAGAGCAGGAGCAGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PRVAVRGKKGRY*IWQYQSRSSSR Trigger: TCTGCTGCTGCTCCTGCTCTGGTACTGCCAGATCCAGTACCGGCCCTTCTTTCCCCTGACCGCTACCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000238335.2 |
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| CDS CCA 72 bp | AGGTCCAGAGGGGCTGGCTACACTGCCAAAAGCCCGTaGAGGCACTACGGCCGATACATGGCAAAGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSRGAGYTAKSP*RHYGRYMAKAR Trigger: CCTGGCCTTTGCCATGTATCGGCCGTAGTGCCTCCACGGGCTTTTGGCAGTGTAGCCAGCCCCTCTGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
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| CDS TCA 72 bp | CTGTGGTTGGGGGTCTGTACTCTCAGTGGTATGTGTTaGGACCCAGGCGAGGGCCAGCACCAGAAGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LWLGVCTLSGMC*DPGEGQHQKAS Trigger: GCTTGCCTTCTGGTGCTGGCCCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS CAA 72 bp | GCTGTGGTTGGGGGTCTGTACTCTCAGTGGTATGTGTaGAGACCCAGGCGAGGGCCAGCACCAGAAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AVVGGLYSQWYV*RPRRGPAPEGK Trigger: CTTGCCTTCTGGTGCTGGCCCTCGCCTGGGTCTCAACACATACCACTGAGAGTACAGACCCCCAACCACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS TCA 72 bp | GGAGAGAGGGACCTTTTTAAGGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACCTGCTCAGAGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: GERDLFKEPMVS*GQALATCSESL Trigger: CAATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAAGGTCCCTCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238335.2 |
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| CDS TCA 72 bp | CCTGAGGCCAGGCCCTGGCTACCTGCTCAGAGTCATTaGGAAATTTCAACCGTAGAAGTAGGGGTTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PEARPWLPAQSH*EISTVEVGVPA Trigger: CGCAGGAACCCCTACTTCTACGGTTGAAATTTCTCAATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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| CDS TCA 72 bp | GGAAACTGGGTCCTTTTTAAGGAGCCAATGGTGTCCTaGGGCCAGGCCCTGGCTACCTGCTCAGAGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: GNWVLFKEPMVS*GQALATCSESL Trigger: CAATGACTCTGAGCAGGTAGCCAGGGCCTGGCCTCAGGACACCATTGGCTCCTTAAAAAGGACCCAGTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000127194.2 |
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| CDS GCA 72 bp | TCATTGAGAAATTTCAACCGTAGAAGTAGGGGTTCCTaGGGAGAGTCTGGAGGTGTTGATGCTGTGACCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLRNFNRRSRGS*GESGGVDAVTP Trigger: AGGGGTCACAGCATCAACACCTCCAGACTCTCCGCAGGAACCCCTACTTCTACGGTTGAAATTTCTCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030799.15 ENSMUST00000115033.8 ENSMUST00000115036.8 ENSMUST00000123167.2 ENSMUST00000127194.2 ENSMUST00000238335.2 |
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