Pregenerated sensors for TMTC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041594Ensembl transcript IDs: ENSMUST00000037726.14, ENSMUST00000126867.8, ENSMUST00000128969.2, ENSMUST00000143189.8, ENSMUST00000148661.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGAGCTCCAAATCCAAAGGTCAGCAGCACGCAGTACCCAGCGCTaGGAAGGTAGAGGACACGTTCTGCGACCACAAAGCCCACTCGGA | + |
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Preference number: 1 (lower is better) Translates to: SELQIQRSAARSTQR*EGRGHVLRPQSPLG Trigger: TCCGAGTGGGCTTTGTGGTCGCAGAACGTGTCCTCTACCTTCCCAGCGCTGGGTACTGCGTGCTGCTGACCTTTGGATTTGGAGCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 90 bp | CCTGTGTTATCCAGAAGTATGATCATGTTGTTCCACGCCAGGCTGTaGTCCGGCTTCAGTACGGTGGCATTTCTCCAAGCGTTCAATGCA | + |
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Preference number: 1 (lower is better) Translates to: PVLSRSMIMLFHARL*SGFSTVAFLQAFNA Trigger: TGCATTGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGCGTGGAACAACATGATCATACTTCTGGATAACACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 90 bp | AGAGGACACGTTCTGCGACCACAAAGCCCACTCGGAAAAACAAGTTaGTTGCAGGAAGAAAGGGGATCACAAGAAATCCCAAACCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGHVLRPQSPLGKTS*LQEERGSQEIPNPE Trigger: CTCTGGGTTTGGGATTTCTTGTGATCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGTGGGCTTTGTGGTCGCAGAACGTGTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR CCA 90 bp | GTTTTTGCCAATGTTGTAGTGAACCTGAAAACACAGGTGACAATTTaGCCATCAGCACATAGACTTCTTTGTTCAAAGCTGGGCATCTAT | + |
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Preference number: 1 (lower is better) Translates to: VFANVVVNLKTQVTI*PSAHRLLCSKLGIY Trigger: ATAGATGCCCAGCTTTGAACAAAGAAGTCTATGTGCTGATGGCCAAATTGTCACCTGTGTTTTCAGGTTCACTACAACATTGGCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 90 bp | CCTAAAGTACGTCAGGGGTACTCTATTAACAGTGGAATATTATCCTaGATACTAACATCACACACATTGGAGAATACATATACATATCAA | + |
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Preference number: 1 (lower is better) Translates to: PKVRQGYSINSGILS*ILTSHTLENTYTYQ Trigger: TTGATATGTATATGTATTCTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTACCCCTGACGTACTTTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCTGTGCTCCGGCTTCAGTACGGTGGCATTTCTCCAAGCGTTCAATGCAACACAGGTAGCCCTCTaGACAGTGGACAGAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: ARLCSGFSTVAFLQAFNATQVAL*TVDRTE Trigger: CTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGT...TGCATTGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGCTGTGCTCCGGCTTCAGTACGGTGGCATTTCTCCAAGCGTTCAATGCAAAGTCTGGCTGTATTTaGACAGCCAACGACAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ARLCSGFSTVAFLQAFNAKSGCI*TANDSS Trigger: GCTGCTGTCGTTGGCTGTCCAAATACAGCCAGACTT...TGCATTGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | CATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTTGTAGTAGCAGTCTTCCCGGTAATATTTaGTGGCCGCTGTTTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: HPRGDLDLHTAARGCSSSLPGNI*WPLFGC Trigger: GCAACCAAACAGCGGCCATCAAATATTACCGGGAAG...ACTGCTACTACAACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTTGGCCGCTGTTTGGTTaGCTTGATCAGCCAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: KRSMHPRGDLDLHTAARGWPLFG*LDQPGF Trigger: AAAACCTGGCTGATCAAGGCAACCAAACAGCGGCCA...ACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAAACCCACGGGGTGAAAGCCTCCGGACAGGTAGTAGTTAATCCTGAAAGTCAGGACAGTAAGTaGCCGGTAGGACTTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HMETHGVKASGQVVVNPESQDSK*PVGLVA Trigger: AGCCACAAGTCCTACCGGCCACTTACTGTCCTGACT...TTCAGGATTAACTACTACCTGTCCGGAGGCTTTCACCCCGTGGGTTTCCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR CAA 90 bp | TCAGCCTGGGCTAAGTTACCTGTGTTATCCAGAAGTATGATCATGTaGTTCCACGCCAGGCTGTGCTCCGGCTTCAGTACGGTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: SAWAKLPVLSRSMIM*FHARLCSGFSTVAF Trigger: AAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGCGTGGAACAACATGATCATACTTCTGGATAACACAGGTAACTTAGCCCAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGATATCGAACACAGCATTCAAGCCCAGCACAGTGATTCCTTGCTCTTTGCACATGCAGGAGGATGTTaGCCACATGGAAACCCACGG | + |
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Preference number: 2 (lower is better) Translates to: QDIEHSIQAQHSDSLLFAHAGGC*PHGNPR Trigger: CCGTGGGTTTCCATGTGGTCAACATCCTCCTGCATG...TGCAAAGAGCAAGGAATCACTGTGCTGGGCTTGAATGCTGTGTTCGATATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGATTCATCCATGCGGCTaGAAAGTCTGGCTGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: LQAFNASTWRFRSAYSRPIHPCG*KVWLYL Trigger: CAAATACAGCCAGACTTTGCAGCCGCATGGATGAAT...CGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGACCTTCCGGACAGCTGCCAGAATGTCGAGTTTGCCTATCACCAGGATATGTTACACACTCAGTGTaGACTGGATGGACAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: VGPSGQLPECRVCLSPGYVTHSV*TGWTAN Trigger: GTTTGCTGTCCATCCAGTGCACACTGAGTGTGTAAC...ATATCCTGGTGATAGGCAAACTCGACATTCTGGCAGCTGTCCGGAAGGTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGTCCGCCACTCACCACTaGGTATCACACATCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSSQKTVILLGAYCHRVKSATHH*VSHISV Trigger: CACTGAGATGTGTGATACGCAGTGGTGAGTGGCGGA...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGATATCGAACACAGCATTCAAGCCCAGCACAGTGATTCCTTGCTCTTTGAGAAGACATCCAGCATaGGGATGGAGATGCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TRISNTAFKPSTVIPCSLRRHPA*GWRCCH Trigger: ATGGCAGCATCTCCATCCTCATGCTGGATGTCTTCT...CAAAGAGCAAGGAATCACTGTGCTGGGCTTGAATGCTGTGTTCGATATCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTGATCAGCCAGGTTTTTaGCAATGTTGTAGTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KRSMHPRGDLDLHTAARGDQPGF*QCCSEP Trigger: AGGTTCACTACAACATTGGCAAAAACCTGGCTGATC...ACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGTGCGGCTGCAAAGTCTaGCTGTATTTGGACAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSSQKTVILLGAYCHRVKCGCKV*LYLDSQ Trigger: TTGGCTGTCCAAATACAGCCAGACTTTGCAGCCGCA...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR CAA 90 bp | CCTCCAATGGTAAGTAGGGCTATTCGGAAAAGGAGGCCTCCATTCTaGAACATGCCTGCATTCTCTTGTGACTTGTCCTTATGTAGGACC | + |
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Preference number: 2 (lower is better) Translates to: PPMVSRAIRKRRPPF*NMPAFSCDLSLCRT Trigger: GGTCCTACATAAGGACAAGTCACAAGAGAATGCAGGCATGTTCAAGAATGGAGGCCTCCTTTTCCGAATAGCCCTACTTACCATTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR-3UTR CCA 90 bp | CACACTCACAAACTCAAAACATTAGGGGGAAGATCAGACATCTTTCTTCTGCGTCCGGCTTCAGTACGGTaGCATTTCTCCAAGCGTTCA | + |
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Preference number: 2 (lower is better) Translates to: HTHKLKTLGGRSDIFLLRPASVR*HFSKRS Trigger: TGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGG...ACGCAGAAGAAAGATGTCTGATCTTCCCCCTAATGTTTTGAGTTTGTGAGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGTGTTATCCAGAAGTATaGTCATGTTGTTCCACGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSSQKTVILLGAYCHRVKCYPEV*SCCSTP Trigger: TGGCGTGGAACAACATGATCATACTTCTGGATAACA...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCACACAGGTAGCCCTCTaGACAGTGGACAGAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: KNSTQSRAMTSFEREPFCTQVAL*TVDRTE Trigger: CTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGT...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| 3UTR-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCGCAGTACCCAGCGCTaGGAAGGTAGAGGACACGTT | + |
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Preference number: 2 (lower is better) Translates to: YSINSGILSCILTSHTLERSTQR*EGRGHV Trigger: AACGTGTCCTCTACCTTCCCAGCGCTGGGTACTGCG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGGTAGAGGACACGTTCTaGGACCACAAAGCCCACTCG | + |
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Preference number: 2 (lower is better) Translates to: YSINSGILSCILTSHTLEVEDTF*DHKAHS Trigger: CGAGTGGGCTTTGTGGTCGCAGAACGTGTCCTCTAC...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTGCGCTTCGAAAGAGCTaGTCTTCACTCCGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: FLDRVMSVILSCEMETHFALRKS*SSLRHS Trigger: TGAGTGGCGGAGTGAAGAGCAGCTCTTTCGAAGCGC...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTCTAGCTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCAACTTGGGATTTAGTCTaGCTGCTTCCCGGTAATATT | + |
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Preference number: 2 (lower is better) Translates to: FVLAFFSEDCNSPWCLLPTWDLV*LLPGNI Trigger: AATATTACCGGGAAGCAGTCAGACTAAATCCCAAGT...TGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAGCTAGAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCTCTCATAGTGTTTCTTaGCAGAGTCAAGATGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: KNSTQSRAMTSFEREPFCSHSVS*QSQDVP Trigger: GGGGACATCTTGACTCTGCCAAGAAACACTATGAGA...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTCTCGGAAAAACAAGTTaGTTGCAGGAAGAAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VYKNSTQSRAMTSFEREPLGKTS*LQEERG Trigger: TCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAG...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCCACAATCCAGAGCTATaGCTTCTTTTGAAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KNSTQSRAMTSFEREPFCHNPEL*LLLKEN Trigger: GTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTG...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTATTGCATCTTCTAATTaGAGATCATGCAATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: VYKNSTQSRAMTSFEREPIASSN*RSCNGI Trigger: GATGCCATTGCATGATCTTCAATTAGAAGATGCAAT...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCCATCACATCCCAAATaGAGTTTAACACAATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: YSINSGILSCILTSHTLEPSHPK*SLTQSK Trigger: TTTTGATTGTGTTAAACTGCATTTGGGATGTGATGG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| 3UTR CCA 72 bp | CAAATCCAAAGGTCAGCAGCACGCAGTACCCAGCGCTaGGAAGGTAGAGGACACGTTCTGCGACCACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: QIQRSAARSTQR*EGRGHVLRPQS Trigger: GCTTTGTGGTCGCAGAACGTGTCCTCTACCTTCCCAGCGCTGGGTACTGCGTGCTGCTGACCTTTGGATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 72 bp | GCAGTACCCAGCGCTGGGAAGGTAGAGGACACGTTCTaGGACCACAAAGCCCACTCGGAAAAACAAGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: AVPSAGKVEDTF*DHKAHSEKQVA Trigger: AGCAACTTGTTTTTCCGAGTGGGCTTTGTGGTCGCAGAACGTGTCCTCTACCTTCCCAGCGCTGGGTACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR CCA 72 bp | TGTTCCCTCCTTGTTACACACTCAGTGTGCACTGGATaGACAGCAAACAGCAACGTGGCCAGCAGGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: CSLLVTHSVCTG*TANSNVASREA Trigger: GGCTTCCCTGCTGGCCACGTTGCTGTTTGCTGTCCATCCAGTGCACACTGAGTGTGTAACAAGGAGGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR GCA 72 bp | TCCAGAAGTATGATCATGTTGTTCCACGCCAGGCTGTaGTCCGGCTTCAGTACGGTGGCATTTCTCCAAGCG | + |
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Preference number: 3 (lower is better) Translates to: SRSMIMLFHARL*SGFSTVAFLQA Trigger: CGCTTGGAGAAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGCGTGGAACAACATGATCATACTTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR CCA 72 bp | AATGTGTTCCCTCCTTGTTACACACTCAGTGTGCACTaGATGGACAGCAAACAGCAACGTGGCCAGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: NVFPPCYTLSVH*MDSKQQRGQQG Trigger: TCCCTGCTGGCCACGTTGCTGTTTGCTGTCCATCCAGTGCACACTGAGTGTGTAACAAGGAGGGAACACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCCTGTGTTTAATCGCTGTCCGGTAGCTCTGCTCTGCTTCCTCAAACCGAAAGTCTGGCTGTATTaGGACAGCCAACGACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: FPPVFNRCPVALLCFLKPKVWLY*DSQRQQ Trigger: CTGCTGTCGTTGGCTGTCCAAATACAGCCAGACTTT...CGGTTTGAGGAAGCAGAGCAGAGCTACCGGACAGCGATTAAACACAGGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 72 bp | GTAGGACCTTCCGGACAGCTGCCAGAATGTCGAGTTTaGCTATCACCAGGATATCGAACACAGCATTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: VGPSGQLPECRV*LSPGYRTQHSS Trigger: GCTTGAATGCTGTGTTCGATATCCTGGTGATAGGCAAACTCGACATTCTGGCAGCTGTCCGGAAGGTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| 3UTR CCA 72 bp | ATCTGCATACAGCCGCCCGAGGTTGTAGTAGCAGTCTaGGTATTTCCTCCTGTGTTTAATCGCTGTCCGGTA | + |
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Preference number: 3 (lower is better) Translates to: ICIQPPEVVVAV*VFPPVFNRCPV Trigger: TACCGGACAGCGATTAAACACAGGAGGAAATACCCAGACTGCTACTACAACCTCGGGCGGCTGTATGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CAA 90 bp | TCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTTGTAGTACTCGGAAAAACAAGTaGCTTGCAGGAAGAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SMHPRGDLDLHTAARGCSTRKNK*LAGRKG Trigger: CCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGT...ACTACAACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 72 bp | GCTGTTCTGAACTATGCCCAAATTCATCCATGCGGCTaGAAAGTCTGGCTGTATTTGGACAGCCAACGACAG | + |
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Preference number: 3 (lower is better) Translates to: AVLNYAQIHPCG*KVWLYLDSQRQ Trigger: CTGTCGTTGGCTGTCCAAATACAGCCAGACTTTGCAGCCGCATGGATGAATTTGGGCATAGTTCAGAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCTGTGCTCCGGCTTCAGTACGGTGGCATTTCTCCAAGCGTTCAATGCAAAAGCTGGGCATCTATaGCATCTTCTAATTGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: ARLCSGFSTVAFLQAFNAKAGHL*HLLIED Trigger: ATCTTCAATTAGAAGATGCAATAGATGCCCAGCTTT...TGCATTGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGGAGCACAGCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGAGAAGTATGATCATGTaGTTCCACGCCAGGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: LSSQKTVILLGAYCHRVKRSMIM*FHARLC Trigger: GCACAGCCTGGCGTGGAACAACATGATCATACTTCT...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR CCA 72 bp | AATGTTGTAGTGAACCTGAAAACACAGGTGACAATTTaGCCATCAGCACATAGACTTCTTTGTTCAAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: NVVVNLKTQVTI*PSAHRLLCSKL Trigger: CAGCTTTGAACAAAGAAGTCTATGTGCTGATGGCCAAATTGTCACCTGTGTTTTCAGGTTCACTACAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| 3UTR GCA 72 bp | CGTCAGGGGTACTCTATTAACAGTGGAATATTATCCTaGATACTAACATCACACACATTGGAGAATACATAT | + |
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Preference number: 3 (lower is better) Translates to: RQGYSINSGILS*ILTSHTLENTY Trigger: ATATGTATTCTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTACCCCTGACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR CCA 90 bp | TGCACTGGATGGACAGCAAACAGCAACGTGGCCAGCAGGGAAGCCCTGGGGGCCCTGCCCCAGAAGTCATaGTGCCACAGGTCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: CTGWTANSNVASREALGALPQKS*CHRSPR Trigger: CCTTGGGGACCTGTGGCACCATGACTTCTGGGGCAG...GGCCCCCAGGGCTTCCCTGCTGGCCACGTTGCTGTTTGCTGTCCATCCAGTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
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| CDS-3UTR CCA 90 bp | AAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTCTGCCCCAGAAGTCATaGTGCCACAGGTCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRSMHPRGDLDLHTAARGLPQKS*CHRSPR Trigger: CCTTGGGGACCTGTGGCACCATGACTTCTGGGGCAG...ACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTTGTAGTAGCAGTGCCAGGTGTACCCTCTaGCCTTTACCGGTGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPRGDLDLHTAARGCSSSARCTL*PLPVYC Trigger: ACAGTACACCGGTAAAGGCCAGAGGGTACACCTGGC...ACTGCTACTACAACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGATGGAGATGCTGCCATaGAGGAGGATGTTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQAFNASTWRFRSAYSRPMEMLP*RRMLTT Trigger: TGTGGTCAACATCCTCCTGCATGGCAGCATCTCCAT...CGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAGGATGCCCAGGATGATGGCGGCAACAGGTTTCTTTTTCTTAGTGTGCAGCAAACAGCAACGTaGCCAGCAGGGAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DEKDAQDDGGNRFLFLSVQQTAT*PAGKPW Trigger: CCAGGGCTTCCCTGCTGGCCACGTTGCTGTTTGCTG...CACACTAAGAAAAAGAAACCTGTTGCCGCCATCATCCTGGGCATCCTTCTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGTCAGTGTGCACTGGATaGACAGCAAACAGCAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQAFNASTWRFRSAYSRPSVCTG*TANSNV Trigger: CACGTTGCTGTTTGCTGTCCATCCAGTGCACACTGA...CGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGCCTCCAGTCACCAACTaGCTTAATGAGGGGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLPPVTN*LNEGDA Trigger: TGCATCCCCCTCATTAAGTCAGTTGGTGACTGGAGG...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTAGCTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACCAGCAGGGAAGCCCTaGGGGCCAGGTGTACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVLAFFSEDCNSPWCLLPPAGKP*GPGVPS Trigger: AGAGGGTACACCTGGCCCCCAGGGCTTCCCTGCTGG...TGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAGCTAGAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGGGAGGCCTCCATTCTTaGACATGCCTGCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLGGLHS*TCLHSL Trigger: AAGAGAATGCAGGCATGTTCAAGAATGGAGGCCTCC...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCCACTCGGAAAAACAAGTTGCTTGCAGGAAGAAAGGGGATCACAAGAAATGGCACACAGGAGGTCTaGACGGCCAACAACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPTRKNKLLAGRKGITRNGTQEV*TANNTS Trigger: GCTGGTGTTGTTGGCCGTGCAGACCTCCTGTGTGCC...ATTTCTTGTGATCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGTGGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGTGCGGCTGCAAAGTCTaGCTGTATTTGGACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLCGCKV*LYLDSQ Trigger: TTGGCTGTCCAAATACAGCCAGACTTTGCAGCCGCA...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | AAGCGTTCAATGCATCCACGTGGCGATTTAGATCTGCATACAGCCGCCCGAGGTGCCATCATAGCTCCTTaGAAAACACAGAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRSMHPRGDLDLHTAARGAIIAP*KTQKGN Trigger: GTTTCCCTTCTGTGTTTTGCAAGGAGCTATGATGGC...ACCTCGGGCGGCTGTATGCAGATCTAAATCGCCACGTGGATGCATTGAACGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGAGTCAGGACAGTAAGTaGCCGGTAGGACTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSQKTVILLGAYCHRVKSQDSK*PVGLVA Trigger: AGCCACAAGTCCTACCGGCCACTTACTGTCCTGACT...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| 3UTR CAA 72 bp | TGTAGGACCTTCCGGACAGCTGCCAGAATGTCGAGTTaGCCTATCACCAGGATATCGAACACAGCATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRTFRTAARMSS*PITRISNTAFK Trigger: CTTGAATGCTGTGTTCGATATCCTGGTGATAGGCAAACTCGACATTCTGGCAGCTGTCCGGAAGGTCCTACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
||
| 3UTR CAA 72 bp | CGTTCTGCGACCACAAAGCCCACTCGGAAAAACAAGTaGCTTGCAGGAAGAAAGGGGATCACAAGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSATTKPTRKNK*LAGRKGITRNP Trigger: GGGATTTCTTGTGATCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGTGGGCTTTGTGGTCGCAGAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| 3UTR CAA 72 bp | GCTAAGTTACCTGTGTTATCCAGAAGTATGATCATGTaGTTCCACGCCAGGCTGTGCTCCGGCTTCAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: AKLPVLSRSMIM*FHARLCSGFST Trigger: CGTACTGAAGCCGGAGCACAGCCTGGCGTGGAACAACATGATCATACTTCTGGATAACACAGGTAACTTAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCTGTGTTTAATCGCTGTCCGGTAGCTCTGCTCTGCTTCCTCAAACCGAACATGCCTGCATTCTaGAAGGACACCACAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPPVFNRCPVALLCFLKPNMPAF*KDTTKF Trigger: GAACTTTGTGGTGTCCTTTCAGAATGCAGGCATGTT...CGGTTTGAGGAAGCAGAGCAGAGCTACCGGACAGCGATTAAACACAGGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGCTCGGAAAAACAAGTTaGTTGCAGGAAGAAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLLGKTS*LQEERG Trigger: TCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAG...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGATTCATCCATGCGGCTaGAAAGTCTGGCTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLIHPCG*KVWLYL Trigger: CAAATACAGCCAGACTTTGCAGCCGCATGGATGAAT...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCTTAGTGTGTCTGCTCAGAGCTCCAAATCCAAAGGTCAGCAGCACGCATACTGCTCAATTTACTaGCCCAGAAGTCATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLSVSAQSSKSKGQQHAYCSIY*PRSHGA Trigger: GGCACCATGACTTCTGGGGCAGTAAATTGAGCAGTA...TGCGTGCTGCTGACCTTTGGATTTGGAGCTCTGAGCAGACACACTAAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCCAGCAGGGAAGCCCTaGGGGCCAGGTGTACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEPAGKP*GPGVPS Trigger: AGAGGGTACACCTGGCCCCCAGGGCTTCCCTGCTGG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCCAGCAAACAGCAACGTaGCCAGCAGGGAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCQQTAT*PAGKPW Trigger: CCAGGGCTTCCCTGCTGGCCACGTTGCTGTTTGCTG...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGGTTGTAGTAGCAGTCTaGGTATTTCCTCCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLVVVAV*VFPPVF Trigger: AAACACAGGAGGAAATACCCAGACTGCTACTACAAC...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGTTCAATGCATCCACGTaGCGATTTAGATCTGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLFNAST*RFRSAY Trigger: GTATGCAGATCTAAATCGCCACGTGGATGCATTGAA...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTGGCACACAGGAGGTCTaGACGGCCAACAACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPGTQEV*TANNTS Trigger: GCTGGTGTTGTTGGCCGTGCAGACCTCCTGTGTGCC...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCTTAGTGTGTCTGCTCAGAGCTCCAAATCCAAAGGTCAGCAGCACGCAGGTAGGACTTGTGGCTaGTGTTACTGCTCAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLSVSAQSSKSKGQQHAGRTCG*CYCSIY Trigger: GTAAATTGAGCAGTAACACCAGCCACAAGTCCTACC...TGCGTGCTGCTGACCTTTGGATTTGGAGCTCTGAGCAGACACACTAAGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| CDS-3UTR CCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCCGCAGTACCCAGCGCTaGGAAGGTAGAGGACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCRSTQR*EGRGHV Trigger: AACGTGTCCTCTACCTTCCCAGCGCTGGGTACTGCG...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR TCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCCATGCAGGAGGATGTTaGCCACATGGAAACCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCHAGGC*PHGNPR Trigger: CCGTGGGTTTCCATGTGGTCAACATCCTCCTGCATG...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTAGCTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCAGCCACCAAACAGTACTaGGAAGACATCCAGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVLAFFSEDCNSPWCLLPATKQY*EDIQHE Trigger: CTCATGCTGGATGTCTTCTCAGTACTGTTTGGTGGC...TGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAGCTAGAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGACCTGTTTCTTTAAATaGTTGACAGTAGCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLTCFFK*LTVAKE Trigger: TTCCTTGGCTACTGTCAAGCATTTAAAGAAACAGGT...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTCTGCCCCAGAAGTCATaGTGCCACAGGTCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFLPQKS*CHRSPR Trigger: CCTTGGGGACCTGTGGCACCATGACTTCTGGGGCAG...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| 3UTR CAA 72 bp | CTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTaGCCTAAAGTACGTCAGGGGTACTCTATTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSGQNRDQDVR*PKVRQGYSINS Trigger: ACTGTTAATAGAGTACCCCTGACGTACTTTAGGCAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| 3UTR CAA 72 bp | GTAAGTAGGGCTATTCGGAAAAGGAGGCCTCCATTCTaGAACATGCCTGCATTCTCTTGTGACTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSRAIRKRRPPF*NMPAFSCDLSL Trigger: TAAGGACAAGTCACAAGAGAATGCAGGCATGTTCAAGAATGGAGGCCTCCTTTTCCGAATAGCCCTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
||
| CDS-3UTR GCA 90 bp | CATCTTCTAATTGAAGATCATGCAATGGCATCCCAACTCCTAACCTTAGCATTGGCAACACACTCAGTGTaGACTGGATGGACAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLIEDHAMASQLLTLALATHSV*TGWTAN Trigger: GTTTGCTGTCCATCCAGTGCACACTGAGTGTGTTGC...CAATGCTAAGGTTAGGAGTTGGGATGCCATTGCATGATCTTCAATTAGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCGCTGTCAGCAAAGGATaGTGGGTTGTCCACCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCAVSKG*WVVHLS Trigger: ACTGAGGTGGACAACCCAGCATCCTTTGCTGACAGC...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTGTAGAGGACACGTTCTaGGACCACAAAGCCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPVEDTF*DHKAHS Trigger: CGAGTGGGCTTTGTGGTCGCAGAACGTGTCCTCTAC...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCCCGGCTTCAGTACGGTaGCATTTCTCCAAGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCPASVR*HFSKRS Trigger: TGAACGCTTGGAGAAATGCCACCGTACTGAAGCCGG...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCGCAACACACTCAGTGTaGACTGGATGGACAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCATHSV*TGWTAN Trigger: GTTTGCTGTCCATCCAGTGCACACTGAGTGTGTTGC...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGAAGGATGCCCAGGATGATGGCGGCAACAGGTTTCTTTTTCTTAGTGTGACCTGTTTCTTTAAATaGTTGACAGTAGCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DEKDAQDDGGNRFLFLSVTCFFK*LTVAKE Trigger: TTCCTTGGCTACTGTCAAGCATTTAAAGAAACAGGT...CACACTAAGAAAAAGAAACCTGTTGCCGCCATCATCCTGGGCATCCTTCTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGGCGCTTCGAAAGAGCTaGTCTTCACTCCGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEALRKS*SSLRHS Trigger: TGAGTGGCGGAGTGAAGAGCAGCTCTTTCGAAGCGC...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGGCCAGGTGTACCCTCTaGCCTTTACCGGTGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEARCTL*PLPVYC Trigger: ACAGTACACCGGTAAAGGCCAGAGGGTACACCTGGC...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR TCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTGCCACCAAACAGTACTaGGAAGACATCCAGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPATKQY*EDIQHE Trigger: CTCATGCTGGATGTCTTCTCAGTACTGTTTGGTGGC...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGTCCGCCACTCACCACTaGGTATCACACATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLESATHH*VSHISV Trigger: CACTGAGATGTGTGATACGCAGTGGTGAGTGGCGGA...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTGGCCGCTGTTTGGTTaGCTTGATCAGCCAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPWPLFG*LDQPGF Trigger: AAAACCTGGCTGATCAAGGCAACCAAACAGCGGCCA...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCCGGTAGCTCTGCTCTaGTTCCTCAAACCGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEPVALL*FLKPFQ Trigger: CTGAAACGGTTTGAGGAAGCAGAGCAGAGCTACCGG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGAGTCAGGACAGTAAGTaGCCGGTAGGACTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLESQDSK*PVGLVA Trigger: AGCCACAAGTCCTACCGGCCACTTACTGTCCTGACT...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTAAGTCTGGCTGTATTTaGACAGCCAACGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPKSGCI*TANDSS Trigger: GCTGCTGTCGTTGGCTGTCCAAATACAGCCAGACTT...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR TCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTAGAAGACATCCAGCATaGGGATGGAGATGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFRRHPA*GWRCCH Trigger: ATGGCAGCATCTCCATCCTCATGCTGGATGTCTTCT...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR TCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCTTCCCGGTAATATTTaGTGGCCGCTGTTTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLELPGNI*WPLFGC Trigger: GCAACCAAACAGCGGCCATCAAATATTACCGGGAAG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR GCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCGCCATCATAGCTCCTTaGAAAACACAGAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCAIIAP*KTQKGN Trigger: GTTTCCCTTCTGTGTTTTGCAAGGAGCTATGATGGC...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR GCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTATGGAGATGCTGCCATaGAGGAGGATGTTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFMEMLP*RRMLTT Trigger: TGTGGTCAACATCCTCCTGCATGGCAGCATCTCCAT...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTGTAATTCTCCTTGGTaGCTACTGCCACAGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPCNSPW*LLPQGQ Trigger: TTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACA...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CCA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCGGTAGGACTTGTGGCTaGTGTTACTGCTCAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KNSTQSRAMTSFEREPFCGRTCG*CYCSIY Trigger: GTAAATTGAGCAGTAACACCAGCCACAAGTCCTACC...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGTCAGTGTGCACTGGATaGACAGCAAACAGCAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLESVCTG*TANSNV Trigger: CACGTTGCTGTTTGCTGTCCATCCAGTGCACACTGA...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGTACTGCTCAATTTACTaGCCCAGAAGTCATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEYCSIY*PRSHGA Trigger: GGCACCATGACTTCTGGGGCAGTAAATTGAGCAGTA...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTTGTGGCTGGTGTTACTaGTCAATTTACTGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFCGWCY*SIYCPR Trigger: TCTGGGGCAGTAAATTGAGCAGTAACACCAGCCACA...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGGGCTGTTCTGAACTATaGCCAAATTCATCCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEGCSEL*PNSSMR Trigger: CCGCATGGATGAATTTGGGCATAGTTCAGAACAGCC...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGCCAACAGCTTCAGCCTaGGCTAAGTTACCTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLEPTASA*AKLPVL Trigger: TAACACAGGTAACTTAGCCCAGGCTGAAGCTGTTGG...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTGAAAAACAAGTTGCTTaGAGGAAGAAAGGGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPEKQVA*RKKGDH Trigger: GTGATCCCCTTTCTTCCTGCAAGCAACTTGTTTTTC...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTATTCTTGAACATGCCTaGATTCTGAAAGGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYKNSTQSRAMTSFEREPILEHA*ILKGHH Trigger: GTGGTGTCCTTTCAGAATGCAGGCATGTTCAAGAAT...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTTCTCATAGTGTTTCTTaGCAGAGTCAAGATGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFSHSVS*QSQDVP Trigger: GGGGACATCTTGACTCTGCCAAGAAACACTATGAGA...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR TCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGACTTGGGATTTAGTCTaGCTGCTTCCCGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLETWDLV*LLPGNI Trigger: AATATTACCGGGAAGCAGTCAGACTAAATCCCAAGT...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR TCA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGTGTTATCCAGAAGTATaGTCATGTTGTTCCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSINSGILSCILTSHTLECYPEV*SCCSTP Trigger: TGGCGTGGAACAACATGATCATACTTCTGGATAACA...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTGATCAGCCAGGTTTTTaGCAATGTTGTAGTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLDRVMSVILSCEMETHFDQPGF*QCCSEP Trigger: AGGTTCACTACAACATTGGCAAAAACCTGGCTGATC...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGAAAGTCTGGCTGTATTaGGACAGCCAACGACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLKVWLY*DSQRQQ Trigger: CTGCTGTCGTTGGCTGTCCAAATACAGCCAGACTTT...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
||
| CDS-3UTR CAA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGACTCGGAAAAACAAGTaGCTTGCAGGAAGAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLTRKNK*LAGRKG Trigger: CCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGT...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | CTCCGCCACTCACCACTGCGTATCACACATCTCAGTGCATTGATGAGAAGGATGAGTTCCTCTTGTGACTaGTCCTTATGTAGGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRHSPLRITHLSALMRRMSSSCD*SLCRTF Trigger: GAAGGTCCTACATAAGGACAAGTCACAAGAGGAACT...CATCCTTCTCATCAATGCACTGAGATGTGTGATACGCAGTGGTGAGTGGCGGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CAA 90 bp | CACACAGGTAGCCCTCTGAACAGTGGACAGAACAGAGACCAGGATGTTAGGTTGGAATGTGTTCCCTCCTaGTTACCTGTTTCTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HTGSPLNSGQNRDQDVRLECVPS*LPVSLN Trigger: ATTTAAAGAAACAGGTAACAAGGAGGGAACACATTC...CAACCTAACATCCTGGTCTCTGTTCTGTCCACTGTTCAGAGGGCTACCTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCACTCGGAAAAACAAGTTGCTTGCAGGAAGAAAGGGGATCACAAGAAATGACTGGAGGTCCTTATaGTTAACAATAGCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPTRKNKLLAGRKGITRNDWRSL*LTIASE Trigger: CTCTGAAGCTATTGTTAACAATAAGGACCTCCAGTC...ATTTCTTGTGATCCCCTTTCTTCCTGCAAGCAACTTGTTTTTCCGAGTGGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTCTCAGAAGACTGTAATTCTCCTTGGTGCCTACTGCCACAGGGTCAAGTGTTTCTTTAAATGCTaGACAGTAGCCAAGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSQKTVILLGAYCHRVKCFFKC*TVAKER Trigger: TCTTTCCTTGGCTACTGTCAAGCATTTAAAGAAACA...CTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTTCTGAGAAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGGATAGAGTAATGTCTGTGATTTTATCATGTGAGATGGAAACCCACTTTGCAAAGGATGCTGGGTaGTCCACCTCAGTAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLDRVMSVILSCEMETHFAKDAG*STSVNA Trigger: GGCATTTACTGAGGTGGACAACCCAGCATCCTTTGC...AAAGTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTAGAAGTATGATCATGTaGTTCCACGCCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VYKNSTQSRAMTSFEREPRSMIM*FHARLC Trigger: GCACAGCCTGGCGTGGAACAACATGATCATACTTCT...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | GTTTATAAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTGACTGGAGGTCCTTATaGTTAACAATAGCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VYKNSTQSRAMTSFEREPDWRSL*LTIASE Trigger: CTCTGAAGCTATTGTTAACAATAAGGACCTCCAGTC...AGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTTATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS-3UTR CAA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGGCATTCTCTTGTGACTaGTCCTTATGTAGGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSINSGILSCILTSHTLEAFSCD*SLCRTF Trigger: GAAGGTCCTACATAAGGACAAGTCACAAGAGAATGC...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | TACTCTATTAACAGTGGAATATTATCCTGCATACTAACATCACACACATTGGAGAAAGCTTCAGACTCCTaGTATTTCTGGGATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSINSGILSCILTSHTLEKASDS*YFWDFP Trigger: GGGGAAATCCCAGAAATACAAGGAGTCTGAAGCTTT...CTCCAATGTGTGTGATGTTAGTATGCAGGATAATATTCCACTGTTAATAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037726.14 |
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| CDS-3UTR CAA 90 bp | AAGAACAGCACACAATCCAGAGCTATGACTTCTTTTGAAAGAGAACCTTTTTGCTGTTTCTTTAAATGCTaGACAGTAGCCAAGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KNSTQSRAMTSFEREPFCCFFKC*TVAKER Trigger: TCTTTCCTTGGCTACTGTCAAGCATTTAAAGAAACA...GCAAAAAGGTTCTCTTTCAAAAGAAGTCATAGCTCTGGATTGTGTGCTGTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037726.14 ENSMUST00000143189.8 |
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| CDS GCA 72 bp | GGTAGGACTTGTGGCTGGTGTTACTGCTCAATTTACTaGCCCAGAAGTCATGGTGCCACAGGTCCCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRTCGWCYCSIY*PRSHGATGPQG Trigger: CCCTTGGGGACCTGTGGCACCATGACTTCTGGGGCAGTAAATTGAGCAGTAACACCAGCCACAAGTCCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037726.14 ENSMUST00000126867.8 ENSMUST00000143189.8 ENSMUST00000148661.2 |
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| CDS CCA 72 bp | ACTGGAGGTCTTAGCCCAGAAAGGGGGAAGGACGGATaGGACAATGTGATCCAAGTCAGCATCCAGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TGGLSPERGKDG*DNVIQVSIQLN Trigger: GTTGAGCTGGATGCTGACTTGGATCACATTGTCCCATCCGTCCTTCCCCCTTTCTGGGCTAAGACCTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128969.2 |
||
| CDS TCA 72 bp | GAAGTCATGGTGCCACAGGTCCCCAAGGGGCGTGTCTaGCTGGAGGTCCTTATTGTTAACAATAGCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EVMVPQVPKGRV*LEVLIVNNSFR Trigger: TCTGAAGCTATTGTTAACAATAAGGACCTCCAGTCAGACACGCCCCTTGGGGACCTGTGGCACCATGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037726.14 ENSMUST00000126867.8 ENSMUST00000143189.8 ENSMUST00000148661.2 |
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| CDS CAA 90 bp | ACATGCCTGCATTCTGAAAGGACACCACAAAGTTCCTCTTGTGACTaGTCCTTATGTAGGACCTTCCGGACAGCTGCCAGAATGTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TCLHSERTPQSSSCD*SLCRTFRTAARMSS Trigger: ACTCGACATTCTGGCAGCTGTCCGGAAGGTCCTACATAAGGACAAGTCACAAGAGGAACTTTGTGGTGTCCTTTCAGAATGCAGGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS CCA 72 bp | AAAGGATGCTGGGTTGTCCACCTCAGTAAATGCCGGTaGGCCTGTTCCCATGATTTTCCAGCGTATATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KGCWVVHLSKCR*ACSHDFPAYIK Trigger: CTTTATATACGCTGGAAAATCATGGGAACAGGCCCACCGGCATTTACTGAGGTGGACAACCCAGCATCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037726.14 ENSMUST00000126867.8 ENSMUST00000148661.2 |
||
| CDS CAA 72 bp | CATTCTGAAAGGACACCACAAAGTTCCTCTTGTGACTaGTCCTTATGTAGGACCTTCCGGACAGCTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HSERTPQSSSCD*SLCRTFRTAAR Trigger: TCTGGCAGCTGTCCGGAAGGTCCTACATAAGGACAAGTCACAAGAGGAACTTTGTGGTGTCCTTTCAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS GCA 72 bp | TATTCGGAAAAGGAGGCCTCCATTCTTGAACATGCCTaGATTCTGAAAGGACACCACAAAGTTCCTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: YSEKEASILEHA*ILKGHHKVPLV Trigger: CACAAGAGGAACTTTGTGGTGTCCTTTCAGAATGCAGGCATGTTCAAGAATGGAGGCCTCCTTTTCCGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143189.8 |
||
| CDS CAA 72 bp | AGGTCCCCAAGGGGCGTGTCTGACTGGAGGTCCTTATaGTTAACAATAGCTTCAGAGTCATCAAAGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSPRGVSDWRSL*LTIASESSKTK Trigger: TTTTGTCTTTGATGACTCTGAAGCTATTGTTAACAATAAGGACCTCCAGTCAGACACGCCCCTTGGGGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037726.14 ENSMUST00000126867.8 ENSMUST00000143189.8 ENSMUST00000148661.2 |
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