Pregenerated sensors for TMTC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036676Ensembl transcript IDs: ENSMUST00000058154.15, ENSMUST00000099318.10, ENSMUST00000128009.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACTGACGTCAGATAATCACACTGGGACTGGGCAAGGATGCACATaGCAGTCTTCCCAGGCACACAGGGAGGGAACTGCAACAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: SLTSDNHTGTGQGCT*QSSQAHREGTATGS Trigger: TGATCCTGTTGCAGTTCCCTCCCTGTGTGCCTGGGAAGACTGGCATGTGCATCCTTGCCCAGTCCCAGTGTGATTATCTGACGTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 90 bp | GCCCTAGCTTATAAAATATATATCCTGGGACAGGTAGGTCTTCAATaGAACTCTCATTTTGATCCTATAGAGAGGACCTTACACAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: ALAYKIYILGQVGLQ*NSHFDPIERTLHSF Trigger: GAAACTGTGTAAGGTCCTCTCTATAGGATCAAAATGAGAGTTTCATTGAAGACCTACCTGTCCCAGGATATATATTTTATAAGCTAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR GCA 90 bp | TATCTGAAGTCACAAAGATACACTCTAAAAACTGAAACAAGATACTaGTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCC | + |
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Preference number: 1 (lower is better) Translates to: YLKSQRYTLKTETRY*FDGYQNLLGRELTP Trigger: GGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTATCTTGTTTCAGTTTTTAGAGTGTATCTTTGTGACTTCAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 90 bp | GTATATATTCTTGACATTTTTCGGTCTCCAGAACAAGCAAACGCATaGTATAGACTGAAGGTCTTGCAAACATTGTTACATGATGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VYILDIFRSPEQANA*YRLKVLQTLLHDAE Trigger: TTCTGCATCATGTAACAATGTTTGCAAGACCTTCAGTCTATATCATGCGTTTGCTTGTTCTGGAGACCGAAAAATGTCAAGAATATATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCAGAAGCAGAACCCTTTaGGGAGCAAGTGTCATGAGT | + |
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Preference number: 2 (lower is better) Translates to: YCFDGYQNLLGRELTPTGRSRTL*GASVMS Trigger: ACTCATGACACTTGCTCCCCAAAGGGTTCTGCTTCT...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTACTATGTCAGGTCCTCTaGGAAACTAAAAGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: SHVFKMTALRQLGVERYLLCQVL*ETKRNG Trigger: CCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAG...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATCAGGTAGGTCTTCAATaGAACTCTCATTTTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: VFKMTALRQLGVERYLLYQVGLQ*NSHFDP Trigger: AGGATCAAAATGAGAGTTTCATTGAAGACCTACCTG...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTAAACAAGATACTGCTTTaGTGGTTACCAAAATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SHVFKMTALRQLGVERYLNKILL*WLPKSP Trigger: AGGAGATTTTGGTAACCATCAAAGCAGTATCTTGTT...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATCAAGTTATAGTACATaGGGTATTCTCCACTCCATA | + |
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Preference number: 2 (lower is better) Translates to: SHVFKMTALRQLGVERYLSSYST*GILHSI Trigger: TATGGAGTGGAGAATACCTCATGTACTATAACTTGA...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR GCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTACTTTACAGTTTAGAGTaGAGGACAAATGCATTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SHVFKMTALRQLGVERYLLYSLE*RTNAFL Trigger: TAGGAATGCATTTGTCCTGCACTCTAAACTGTAAAG...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR CAA 90 bp | CTGGGCTTAAAATGTTTACATTCTCATGTCTTCAAGATGACAGCATaGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATCTTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: LGLKCLHSHVFKMTA*RQLGVERYLLYLLI Trigger: GATGAGAAGATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGAATGTAAACATTTTAAGCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTTCTCCACTCCATATCTaGAGTCACAAAGATACACTC | + |
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Preference number: 2 (lower is better) Translates to: RRVGEWGLSLEELENFQFSPLHI*SHKDTL Trigger: GAGTGTATCTTTGTGACTTCAGATATGGAGTGGAGA...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTATGAAACTCTCATTTTaGTCCTATAGAGAGGACCTT | + |
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Preference number: 2 (lower is better) Translates to: RRVGEWGLSLEELENFQFMKLSF*SYREDL Trigger: AAGGTCCTCTCTATAGGATCAAAATGAGAGTTTCAT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTACGCATGATATAGACTaGAGGTCTTGCAAACATTGT | + |
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Preference number: 2 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLTHDID*RSCKHC Trigger: ACAATGTTTGCAAGACCTTCAGTCTATATCATGCGT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTACCAGTATATATTCTTaGCATTTTTCGGTCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLTSIYS*HFSVSR Trigger: TCTGGAGACCGAAAAATGTCAAGAATATATACTGGT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR GCA 72 bp | TCAGATAATCACACTGGGACTGGGCAAGGATGCACATaGCAGTCTTCCCAGGCACACAGGGAGGGAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: SDNHTGTGQGCT*QSSQAHREGTA Trigger: TGCAGTTCCCTCCCTGTGTGCCTGGGAAGACTGGCATGTGCATCCTTGCCCAGTCCCAGTGTGATTATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATCAGAAGCAGAACCCTTaGGGGAGCAAGTGTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: VFKMTALRQLGVERYLLYQKQNP*GSKCHE Trigger: CTCATGACACTTGCTCCCCAAAGGGTTCTGCTTCTG...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCTCCCCACCCTTTTCTTaGTATATTAAACACACACCT | + |
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Preference number: 3 (lower is better) Translates to: YCFDGYQNLLGRELTPTGSPPFS*YIKHTP Trigger: AGGTGTGTGTTTAATATACAAAGAAAAGGGTGGGGA...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | ATCATTATAAGGCCTAACCTGGAAGAGGAGGGTTGGTaGGTGGGGCTTGTCACTAGAAGAATTAGAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: IIIRPNLEEEGW*VGLVTRRIRKL Trigger: AAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCTCTTCCAGGTTAGGCCTTATAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATAACCAGTATATATTCTaGACATTTTTCGGTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VFKMTALRQLGVERYLLYNQYIF*TFFGLQ Trigger: CTGGAGACCGAAAAATGTCAAGAATATATACTGGTT...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATAAAGTAAATGTCACATaGTGTTGCCTTCAGTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: VFKMTALRQLGVERYLLYKVNVT*CCLQLS Trigger: GCTTAACTGAAGGCAACACAATGTGACATTTACTTT...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | CCTGGGACAGGTAGGTCTTCAATGAAACTCTCATTTTaGTCCTATAGAGAGGACCTTACACAGTTTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PGTGRSSMKLSF*SYREDLTQFLK Trigger: TTTCAGAAACTGTGTAAGGTCCTCTCTATAGGATCAAAATGAGAGTTTCATTGAAGACCTACCTGTCCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR CCA 72 bp | ATTACTCTAAAGCTTAAAGCCAGAAGCAGAACCCTTTaGGGAGCAAGTGTCATGAGTAGTCATGGTAATGTA | + |
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Preference number: 3 (lower is better) Translates to: ITLKLKARSRTL*GASVMSSHGNV Trigger: TACATTACCATGACTACTCATGACACTTGCTCCCCAAAGGGTTCTGCTTCTGGCTTTAAGCTTTAGAGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTAAACAAGATACTGCTTaGATGGTTACCAAAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: RRVGEWGLSLEELENFQFKQDTA*MVTKIS Trigger: GGAGATTTTGGTAACCATCAAAGCAGTATCTTGTTT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTCATAAAAGGTTTCCTTaGACTTTATGTACTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: RRVGEWGLSLEELENFQFHKRFP*TLCTEL Trigger: CAGCTCAGTACATAAAGTCAAAGGAAACCTTTTATG...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | TTCGGTCTCCAGAACAAGCAAACGCATGATATAGACTaGAGGTCTTGCAAACATTGTTACATGATGCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: FGLQNKQTHDID*RSCKHCYMMQN Trigger: ATTCTGCATCATGTAACAATGTTTGCAAGACCTTCAGTCTATATCATGCGTTTGCTTGTTCTGGAGACCGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | TTAAGCTATATCCTTTTATATCTGCACACAATCCTGTaGTATGTCGTGTGTGTGTGTGTGTGTGTGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LSYILLYLHTIL*YVVCVCVCVCA Trigger: AGCACACACACACACACACACACACACGACATATCACAGGATTGTGTGCAGATATAAAAGGATATAGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR GCA 72 bp | ACTTTCCCTACTTTACAGTTTAGAGTGCAGGACAAATaGATTCCTAAGCTAACATGTCATCTCTGTGATGCA | + |
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Preference number: 3 (lower is better) Translates to: TFPTLQFRVQDK*IPKLTCHLCDA Trigger: TGCATCACAGAGATGACATGTTAGCTTAGGAATGCATTTGTCCTGCACTCTAAACTGTAAAGTAGGGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | TACATGCTGGTATTAGAGGTGCTGGCTGATGGTTTCTaGAACGTTACTTTCACTATACTCTATAAAATCATG | + |
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Preference number: 3 (lower is better) Translates to: YMLVLEVLADGF*NVTFTILYKIM Trigger: CATGATTTTATAGAGTATAGTGAAAGTAACGTTTCAGAAACCATCAGCCAGCACCTCTAATACCAGCATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| 3UTR GCA 72 bp | TCACAAAGATACACTCTAAAAACTGAAACAAGATACTaGTTTGATGGTTACCAAAATCTCCTGGGTCGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SQRYTLKTETRY*FDGYQNLLGRE Trigger: TTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTATCTTGTTTCAGTTTTTAGAGTGTATCTTTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | GAGAGAATAGTAACTTCATCTTCAAGTTATAGTACATaGGGTATTCTCCACTCCATATCTGAAGTCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: ERIVTSSSSYST*GILHSISEVTK Trigger: CTTTGTGACTTCAGATATGGAGTGGAGAATACCTCATGTACTATAACTTGAAGATGAAGTTACTATTCTCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR TCA 72 bp | TATAAAATATATATCCTGGGACAGGTAGGTCTTCAATaGAACTCTCATTTTGATCCTATAGAGAGGACCTTA | + |
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Preference number: 3 (lower is better) Translates to: YKIYILGQVGLQ*NSHFDPIERTL Trigger: TAAGGTCCTCTCTATAGGATCAAAATGAGAGTTTCATTGAAGACCTACCTGTCCCAGGATATATATTTTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCAGTCTGGCCTCATGCTaGTGGCCTGTCGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGSLASC*WPVGTA Trigger: AGCTGTACCGACAGGCCATCAGCATGAGGCCAGACT...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATGGAGTCTTATCAGCTaGGGCCAGTGGCTGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SHVFKMTALRQLGVERYLWSLIS*GQWLLH Trigger: GTGGAGCAGCCACTGGCCCCAGCTGATAAGACTCCA...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCCCGATGTCATCTGGCTaGACATGGGTAGCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGPMSSG*TWVACK Trigger: CTTGCAGGCTACCCATGTTCAGCCAGATGACATCGG...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCCTGTCGTGTCGGGGTTaGGCTTACAGCAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGLSCRG*AYSSWI Trigger: AATCCAGCTGCTGTAAGCCCAACCCCGACACGACAG...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATGGCACCGATGTCATCTaGCTGAACATGGGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VFKMTALRQLGVERYLLYGTDVI*LNMGSL Trigger: CAGGCTACCCATGTTCAGCCAGATGACATCGGTGCC...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAGTCTGGCCTCATGCTaGTGGCCTGTCGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLSLASC*WPVGTA Trigger: AGCTGTACCGACAGGCCATCAGCATGAGGCCAGACT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCCGATGTCATCTGGCTaGACATGGGTAGCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLPMSSG*TWVACK Trigger: CTTGCAGGCTACCCATGTTCAGCCAGATGACATCGG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCGGCCTGTATGACTTGTaGCTTCTCTCCTCAGACATA | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGGLYDL*LLSSDI Trigger: TATGTCTGAGGAGAGAAGCCACAAGTCATACAGGCC...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCTGTCGTGTCGGGGTTaGGCTTACAGCAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLLSCRG*AYSSWI Trigger: AATCCAGCTGCTGTAAGCCCAACCCCGACACGACAG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CCA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATGTGGTATTGTCCCCATaGTCCAATCACAGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VFKMTALRQLGVERYLLYVVLSP*SNHSRA Trigger: AGCTCTGCTGTGATTGGACCATGGGGACAATACCAC...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGGCACCGATGTCATCTaGCTGAACATGGGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLGTDVI*LNMGSL Trigger: CAGGCTACCCATGTTCAGCCAGATGACATCGGTGCC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR TCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCACTGGAAGTTGTGACTaGATAACTTGGACTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGTGSCD*ITWTLT Trigger: GGTCAGAGTCCAAGTTATTCAGTCACAACTTCCAGT...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR GCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCAGGCGGGACTCATTTaGTCGAATAAGGTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLQAGLI*SNKVGQ Trigger: CTGGCCAACCTTATTCGAGCAAATGAGTCCCGCCTG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCTCGGGGTCCACACTATaGAATTATCTGGTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGSGSTL*NYLVLL Trigger: CAAAAGGACCAGATAATTCCATAGTGTGGACCCCGA...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CCA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATGGGTTAGTATCACCATaGACAGACAAACCCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFKMTALRQLGVERYLLYGLVSP*TDKPTR Trigger: TCTCGTGGGTTTGTCTGTCCATGGTGATACTAACCC...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTACAGTCCCAATTTCTATaGAGTGTTTTCAAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SHVFKMTALRQLGVERYLQSQFL*SVFKAW Trigger: CCATGCCTTGAAAACACTTCATAGAAATTGGGACTG...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCAATCTGAGGCATCAGTaGTTTAGCCAGCATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGNLRHQ*FSQHVR Trigger: TCTTACATGCTGGCTAAATCACTGATGCCTCAGATT...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCCCAAGACTCAGCTTCTaGATCCTTTTTGTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCFDGYQNLLGRELTPTGPRLSF*ILFVIH Trigger: ATGGATGACAAAAAGGATTCAGAAGCTGAGTCTTGG...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTAACTCCTTAGCAGTCTaGGAATACAGGAGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRVGEWGLSLEELENFQFNSLAV*EYRSAR Trigger: CCTGGCACTCCTGTATTCGCAGACTGCTAAGGAGTT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGTGGTATTGTCCCCATaGTCCAATCACAGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLVVLSP*SNHSRA Trigger: AGCTCTGCTGTGATTGGACCATGGGGACAATACCAC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCTTCCTACATTCATGTaGGCACCGATGTCATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLLPTFM*APMSSG Trigger: GCCAGATGACATCGGTGCCCACATGAATGTAGGAAG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTATCAGCTGGGGCCAGTaGCTGCTCCACAATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLISWGQ*LLHNTR Trigger: TCTGGTATTGTGGAGCAGCCACTGGCCCCAGCTGAT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAGGCGGCAACCACGCTaGCTATTAAAGTCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLRRQPR*LLKSLL Trigger: AAGAAGTGACTTTAATAGTCAGCGTGGTTGCCGCCT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR TCA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATCATTCTCCAGAGCATaGCCCACATTATTCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHVFKMTALRQLGVERYLSFSRA*PTLFHN Trigger: ATTATGGAATAATGTGGGTCATGCTCTGGAGAATGA...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTCAGGCGGGACTCATTTaGTCGAATAAGGTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLQAGLI*SNKVGQ Trigger: CTGGCCAACCTTATTCGAGCAAATGAGTCCCGCCTG...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGGCCTGTATGACTTGTaGCTTCTCTCCTCAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLGLYDL*LLSSDI Trigger: TATGTCTGAGGAGAGAAGCCACAAGTCATACAGGCC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATTGGGCTTACAGCAGCTaGATTATCAAACCTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFKMTALRQLGVERYLLYWAYSS*IIKPGK Trigger: TTTACCAGGTTTGATAATCCAGCTGCTGTAAGCCCA...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGGGTTAGTATCACCATaGACAGACAAACCCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLGLVSP*TDKPTR Trigger: TCTCGTGGGTTTGTCTGTCCATGGTGATACTAACCC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTACTGGAAGTTGTGACTaGATAACTTGGACTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLTGSCD*ITWTLT Trigger: GGTCAGAGTCCAAGTTATTCAGTCACAACTTCCAGT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTTTACCAGGGATAATCTaGGGCATCAGTGATTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLLPGII*GISDLA Trigger: GGCTAAATCACTGATGCCTCAGATTATCCCTGGTAA...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTTCGGGGTCCACACTATaGAATTATCTGGTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLSGSTL*NYLVLL Trigger: CAAAAGGACCAGATAATTCCATAGTGTGGACCCCGA...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTCTTCCTACATTCATGTaGGCACCGATGTCATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLLPTFM*APMSSG Trigger: GCCAGATGACATCGGTGCCCACATGAATGTAGGAAG...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTAGGCGGCAACCACGCTaGCTATTAAAGTCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLRRQPR*LLKSLL Trigger: AAGAAGTGACTTTAATAGTCAGCGTGGTTGCCGCCT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCAGTCCCAATTTCTATaGAGTGTTTTCAAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLQSQFL*SVFKAW Trigger: CCATGCCTTGAAAACACTTCATAGAAATTGGGACTG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAATCTGAGGCATCAGTaGTTTAGCCAGCATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLNLRHQ*FSQHVR Trigger: TCTTACATGCTGGCTAAATCACTGATGCCTCAGATT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTCTGCGAATACAGGAGTaGCAGGTTAAACAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLLRIQE*QVKQSA Trigger: AGCGCTTTGTTTAACCTGGCACTCCTGTATTCGCAG...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR GCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTACAACACACAGGTTGTaGTTCCCCTGCACATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLTTHRL*FPCTLL Trigger: AAGCAATGTGCAGGGGAAGCACAACCTGTGTGTTGT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTTCATTCTCCAGAGCATaGCCCACATTATTCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLSFSRA*PTLFHN Trigger: ATTATGGAATAATGTGGGTCATGCTCTGGAGAATGA...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR TCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTTTACCAGGGATAATCTaGGGCATCAGTGATTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLLPGII*GISDLA Trigger: GGCTAAATCACTGATGCCTCAGATTATCCCTGGTAA...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTAAACAATGTATATTCTaGCTCCCAGTCCCAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRVGEWGLSLEELENFQFKQCIF*LPVPIS Trigger: AGAAATTGGGACTGGGAGTCAGAATATACATTGTTT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAAACAATGTATATTCTaGCTCCCAGTCCCAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLKQCIF*LPVPIS Trigger: AGAAATTGGGACTGGGAGTCAGAATATACATTGTTT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTGGTATATCCTTCTTTTaGTTCATCAGAATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRVGEWGLSLEELENFQFGISFF*FIRMSP Trigger: AGGAGACATTCTGATGAACCAAAAGAAGGATATACC...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| 3UTR CAA 72 bp | AAATGTTTACATTCTCATGTCTTCAAGATGACAGCATaGAGGCAGCTGGGGGTGGAGCGATATTTATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KCLHSHVFKMTA*RQLGVERYLLY Trigger: ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGAATGTAAACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR TCA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTAAACACTGGAAGTTGTaGCTGAATAACTTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLKHWKL*LNNLDS Trigger: AGAGTCCAAGTTATTCAGTCACAACTTCCAGTGTTT...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR GCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTAAAGGTGTAGATGGATaGAGGTCTTTATTATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVGEWGLSLEELENFQFKGVDG*RSLLSN Trigger: ATTGGATAATAAAGACCTGCATCCATCTACACCTTT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR GCA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAAAGGTGTAGATGGATaGAGGTCTTTATTATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NHASNPPTYASSCHLKGLKGVDG*RSLLSN Trigger: ATTGGATAATAAAGACCTGCATCCATCTACACCTTT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTACTTCACCTGATTCCTaGATTAAAATAGCAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVGEWGLSLEELENFQFTSPDS*IKIAEL Trigger: CAATTCTGCTATTTTAATGCAGGAATCAGGTGAAGT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS GCA 90 bp | GTCTGCAGCATAGATAACGGAATGCTGCCCTTCCCGCGCAGAAACTaGCCGGCAACGGTGCATAACATCGGCAAGGTGTACCCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCSIDNGMLPFPRRN*PATVHNIGKVYPWA Trigger: GGCCCAAGGGTACACCTTGCCGATGTTATGCACCGTTGCCGGGCAGTTTCTGCGCGGGAAGGGCAGCATTCCGTTATCTATGCTGCAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS CCA 90 bp | GCCTGTTTGAAGTCTGGCCTCATGCTGATGGCCTGTCGGTACAGCTaGTCCGCTTCCTCCAGGCGGGACTCATTTGCTCGAATAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACLKSGLMLMACRYS*SASSRRDSFARIRL Trigger: CAACCTTATTCGAGCAAATGAGTCCCGCCTGGAGGAAGCGGACCAGCTGTACCGACAGGCCATCAGCATGAGGCCAGACTTCAAACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS CCA 90 bp | GATAAGAGTTCCGCTCTTCCTACAACACCTGTGACTGCCTCGGTATaGATTGGGTGCACTGCGAAGAGCAGAGCCGCAATCATGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKSSALPTTPVTASV*IGCTAKSRAAIMLL Trigger: GAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGAGCGGAACTCTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS-3UTR CAA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCGCTGTCGTGTCGGGGTaGGGCTTACAGCAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YCFDGYQNLLGRELTPTGAVVSG*GLQQLD Trigger: ATCCAGCTGCTGTAAGCCCAACCCCGACACGACAGC...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS TCA 90 bp | GGAAAAAGACAGATGATAAGAGTTCCGCTCTTCCTACAACACCTGTaGCTGCCTCGGTATGGATTGGGTGCACTGCGAAGAGCAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKRQMIRVPLFLQHL*LPRYGLGALRRAEP Trigger: CGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGAGCGGAACTCTTATCATCTGTCTTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS GCA 90 bp | TCTTCCTACAACACCTGTGACTGCCTCGGTATGGATTGGGTGCACTaGGAAGAGCAGAGCCGCAATCATGCTGCTCCTCTTATCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSYNTCDCLGMDWVH*EEQSRNHAAPLIQK Trigger: TTTCTGGATAAGAGGAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS GCA 90 bp | AGTAGCAAGGTACTGAGCATCAGGACAATGAGCTTCACCAGTGTCTaGAGCATAGATAACGGAATGCTGCCCTTCCCGCGCAGAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKVLSIRTMSFTSV*SIDNGMLPFPRRNC Trigger: GCAGTTTCTGCGCGGGAAGGGCAGCATTCCGTTATCTATGCTGCAGACACTGGTGAAGCTCATTGTCCTGATGCTCAGTACCTTGCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS CCA 90 bp | AGAAGGGATTTCCTCTCTCTCCTCTGTACCTGGAGTCTTATCAGCTaGGGCCAGTGGCTGCTCCACAATACCAGAAGAGGAGATTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: RRDFLSLLCTWSLIS*GQWLLHNTRRGDSI Trigger: GATAGAATCTCCTCTTCTGGTATTGTGGAGCAGCCACTGGCCCCAGCTGATAAGACTCCAGGTACAGAGGAGAGAGAGGAAATCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGCTGTCGTGTCGGGGTaGGGCTTACAGCAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLAVVSG*GLQQLD Trigger: ATCCAGCTGCTGTAAGCCCAACCCCGACACGACAGC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
||
| CDS-3UTR CAA 90 bp | TCTCATGTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTACGGCAAGGTGTACCCTaGGGCCACAAATACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SHVFKMTALRQLGVERYLRQGVP*GHKYFI Trigger: TATGAAGTATTTGTGGCCCAAGGGTACACCTTGCCG...TAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS CCA 90 bp | AGAAACTGCCCGGCAACGGTGCATAACATCGGCAAGGTGTACCCTTaGGCCACAAATACTTCATATACACAACAAATTCCGACAACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RNCPATVHNIGKVYP*ATNTSYTQQIPTTV Trigger: AACGGTTGTCGGAATTTGTTGTGTATATGAAGTATTTGTGGCCCAAGGGTACACCTTGCCGATGTTATGCACCGTTGCCGGGCAGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
||
| CDS-3UTR CAA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCGCTTCTGAATCCTTTTaGTCATCCATGGCGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YCFDGYQNLLGRELTPTGASESF*SSMASI Trigger: GATGCTCGCCATGGATGACAAAAAGGATTCAGAAGC...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
||
| CDS TCA 90 bp | GGAACACTGTGTTCAGGAGGTGGTAAGACATGGGTTTCAGCTCACTaGGGAGATAATTTAAGCGAAATGTCAACACCGTTAAGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTLCSGGGKTWVSAH*GDNLSEMSTPLRAC Trigger: ACAGGCCCTTAACGGTGTTGACATTTCGCTTAAATTATCTCCTCAGTGAGCTGAAACCCATGTCTTACCACCTCCTGAACACAGTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 ENSMUST00000128009.2 |
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| CDS CCA 90 bp | ATTCACAGGAAGGAGATAGTTAAAAGTCAGCTGTCGTGTCGGGGTTaGGCTTACAGCAGCTGGATTATCAAACCTGGTAAACACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IHRKEIVKSQLSCRG*AYSSWIIKPGKHWK Trigger: CTTCCAGTGTTTACCAGGTTTGATAATCCAGCTGCTGTAAGCCCAACCCCGACACGACAGCTGACTTTTAACTATCTCCTTCCTGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 90 bp | GATTTCGAACATCTAGAAATGATTCTATCAGTGGTATTGTCCCCATaGTCCAATCACAGCAGAGCTCCGAAGGATTCAGCAGAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DFEHLEMILSVVLSP*SNHSRAPKDSAEAR Trigger: CCTGGCTTCTGCTGAATCCTTCGGAGCTCTGCTGTGATTGGACCATGGGGACAATACCACTGATAGAATCATTTCTAGATGTTCGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTAAGGGCCTGTATGACTaGTGGCTTCTCTCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRVGEWGLSLEELENFQFKGLYD*WLLSSD Trigger: GTCTGAGGAGAGAAGCCACAAGTCATACAGGCCCTT...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTAAGGGCCTGTATGACTaGTGGCTTCTCTCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLKGLYD*WLLSSD Trigger: GTCTGAGGAGAGAAGCCACAAGTCATACAGGCCCTT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCGGCAAGGTGTACCCTaGGGCCACAAATACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLRQGVP*GHKYFI Trigger: TATGAAGTATTTGTGGCCCAAGGGTACACCTTGCCG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CAA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATATTCTATCAGTGGTATaGTCCCCATGGTCCAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFKMTALRQLGVERYLLYILSVV*SPWSNH Trigger: GTGATTGGACCATGGGGACAATACCACTGATAGAAT...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTCCATTAGGACAGTCTTaGAGGAGTCACCAGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: RRVGEWGLSLEELENFQFPLGQS*RSHQGI Trigger: GATACCCTGGTGACTCCTCAAAGACTGTCCTAATGG...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTCCATTAGGACAGTCTTaGAGGAGTCACCAGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLPLGQS*RSHQGI Trigger: GATACCCTGGTGACTCCTCAAAGACTGTCCTAATGG...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTTCCCCTGCACATTGCTaGGATCCATTTCCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RRVGEWGLSLEELENFQFSPAHC*DPFPGS Trigger: AGATCCTGGAAATGGATCCAAGCAATGTGCAGGGGA...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS GCA 90 bp | AGCAGCTCTTCTAAAATTGGCAATGCCTTTAACTCCTTAGCAGTCTaGGAATACAGGAGTGCCAGGTTAAACAAAGCGCTTCTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSKIGNAFNSLAV*EYRSARLNKALLKS Trigger: TGACTTCAGAAGCGCTTTGTTTAACCTGGCACTCCTGTATTCGCAGACTGCTAAGGAGTTAAAGGCATTGCCAATTTTAGAAGAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | GTCTTCAAGATGACAGCATTGAGGCAGCTGGGGGTGGAGCGATATTTATTGTATGCAGCTCTTCTAAAATaGGCAATGCCTTTAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFKMTALRQLGVERYLLYAALLK*AMPLTP Trigger: AGGAGTTAAAGGCATTGCCAATTTTAGAAGAGCTGC...ATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | TACTGCTTTGATGGTTACCAAAATCTCCTGGGTCGAGAACTAACACCCACTGGCAGGTATATCCTTCTTTaGGTTCATCAGAATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YCFDGYQNLLGRELTPTGRYILL*VHQNVS Trigger: GGAGACATTCTGATGAACCAAAAGAAGGATATACCT...GCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTTGCTTCCCCTGCACATaGCTTGGATCCATTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLCFPCT*LGSISR Trigger: CCTGGAAATGGATCCAAGCAATGTGCAGGGGAAGCA...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTATTCTATCAGTGGTATaGTCCCCATGGTCCAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLILSVV*SPWSNH Trigger: GTGATTGGACCATGGGGACAATACCACTGATAGAAT...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGGTTGGTGAGTGGGGCTTGTCACTAGAAGAATTAGAAAACTTCCAATTTGACAACCGTTATTCCTaGTTCCTTACACAATGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRVGEWGLSLEELENFQFDNRYS*FLTQCC Trigger: GCAACATTGTGTAAGGAACAAGGAATAACGGTTGTC...AAATTGGAAGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS-3UTR CAA 90 bp | AATCATGCAAGTAACCCTCCCACATATGCCTCTTCATGTCACTTGAAAGGACTTGTTCCTTACACAATGTaGCAACAGCCACTAAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: NHASNPPTYASSCHLKGLVPYTM*QQPLKT Trigger: TGTTTTTAGTGGCTGTTGCAACATTGTGTAAGGAAC...AAGTCCTTTCAAGTGACATGAAGAGGCATATGTGGGAGGGTTACTTGCATGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099318.10 |
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| CDS TCA 90 bp | GCTGACATAAACAATGTATATTCTGACTCCCAGTCCCAATTTCTATaGAGTGTTTTCAAGGCATGGGTTAGTATCACCATGGACAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: ADINNVYSDSQSQFL*SVFKAWVSITMDRQ Trigger: TTGTCTGTCCATGGTGATACTAACCCATGCCTTGAAAACACTTCATAGAAATTGGGACTGGGAGTCAGAATATACATTGTTTATGTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 90 bp | AGCCGTTTTCTAGCTTCAGGTCTGAGTTTAACTTCACCTGATTCCTaGATTAAAATAGCAGAATTGAACAGTGCTAGCTTATGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRFLASGLSLTSPDS*IKIAELNSASLCLG Trigger: CCCTAAACATAAGCTAGCACTGTTCAATTCTGCTATTTTAATGCAGGAATCAGGTGAAGTTAAACTCAGACCTGAAGCTAGAAAACGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS TCA 90 bp | TTGTGGCTTCTCTCCTCAGACATAGGAGTTCCCCAGAAGTCATTCTaGAATAAAGTTTTTAAAGGTGTAGATGGATGCAGGTCTTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: LWLLSSDIGVPQKSF*NKVFKGVDGCRSLL Trigger: TAATAAAGACCTGCATCCATCTACACCTTTAAAAACTTTATTTCAGAATGACTTCTGGGGAACTCCTATGTCTGAGGAGAGAAGCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 ENSMUST00000128009.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGAAAGAAATCTATGTCAGGTCCTCTGGGAAACTAAAAGGAATGGGTCTTGTTCCTTACACAATGTaGCAACAGCCACTAAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RKKEIYVRSSGKLKGMGLVPYTM*QQPLKT Trigger: TGTTTTTAGTGGCTGTTGCAACATTGTGTAAGGAAC...AAGACCCATTCCTTTTAGTTTCCCAGAGGACCTGACATAGATTTCTTTCTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS CCA 72 bp | AAGTCTGGCCTCATGCTGATGGCCTGTCGGTACAGCTaGTCCGCTTCCTCCAGGCGGGACTCATTTGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: KSGLMLMACRYS*SASSRRDSFAR Trigger: TCGAGCAAATGAGTCCCGCCTGGAGGAAGCGGACCAGCTGTACCGACAGGCCATCAGCATGAGGCCAGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | CCTACAACACCTGTGACTGCCTCGGTATGGATTGGGTaGACTGCGAAGAGCAGAGCCGCAATCATGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PTTPVTASVWIG*TAKSRAAIMLL Trigger: GAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | TCCGCTCTTCCTACAACACCTGTGACTGCCTCGGTATaGATTGGGTGCACTGCGAAGAGCAGAGCCGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SALPTTPVTASV*IGCTAKSRAAI Trigger: GATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | AACACCTGTGACTGCCTCGGTATGGATTGGGTGCACTaGGAAGAGCAGAGCCGCAATCATGCTGCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NTCDCLGMDWVH*EEQSRNHAAPL Trigger: AAGAGGAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | ATCCTCAGAAGGGATTTCCTCTCTCTCCTCTGTACCTaGAGTCTTATCAGCTGGGGCCAGTGGCTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILRRDFLSLLCT*SLISWGQWLLH Trigger: GTGGAGCAGCCACTGGCCCCAGCTGATAAGACTCCAGGTACAGAGGAGAGAGAGGAAATCCCTTCTGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS GCA 72 bp | GGATTGGGTGCACTGCGAAGAGCAGAGCCGCAATCATaGTGCTCCTCTTATCCAGAAAGAGTCTGCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GLGALRRAEPQS*CSSYPERVCRP Trigger: AGGTCTGCAGACTCTTTCTGGATAAGAGGAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | GTACTGAGCATCAGGACAATGAGCTTCACCAGTGTCTaGAGCATAGATAACGGAATGCTGCCCTTCCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VLSIRTMSFTSV*SIDNGMLPFPR Trigger: GCGCGGGAAGGGCAGCATTCCGTTATCTATGCTGCAGACACTGGTGAAGCTCATTGTCCTGATGCTCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | CAACTCTCCCCTGCTAATGTAAGCCTGTTTGAAGTCTaGCCTCATGCTGATGGCCTGTCGGTACAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QLSPANVSLFEV*PHADGLSVQLV Trigger: GACCAGCTGTACCGACAGGCCATCAGCATGAGGCCAGACTTCAAACAGGCTTACATTAGCAGGGGAGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | GTACAGCTGGTCCGCTTCCTCCAGGCGGGACTCATTTaGTCGAATAAGGTTGGCCAGATTGATATAAACGTT | + |
|
Preference number: 6 (lower is better) Translates to: VQLVRFLQAGLI*SNKVGQIDINV Trigger: AACGTTTATATCAATCTGGCCAACCTTATTCGAGCAAATGAGTCCCGCCTGGAGGAAGCGGACCAGCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CAA 72 bp | AAGCGAAATGTCAACACCGTTAAGGGCCTGTATGACTaGTGGCTTCTCTCCTCAGACATAGGAGTTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KRNVNTVKGLYD*WLLSSDIGVPQ Trigger: CTGGGGAACTCCTATGTCTGAGGAGAGAAGCCACAAGTCATACAGGCCCTTAACGGTGTTGACATTTCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 ENSMUST00000128009.2 |
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| CDS CAA 90 bp | AAGTGGCGAGATTTCGAACATCTAGAAATGATTCTATCAGTGGTATaGTCCCCATGGTCCAATCACAGCAGAGCTCCGAAGGATTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KWRDFEHLEMILSVV*SPWSNHSRAPKDSA Trigger: TGCTGAATCCTTCGGAGCTCTGCTGTGATTGGACCATGGGGACAATACCACTGATAGAATCATTTCTAGATGTTCGAAATCTCGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | AAGGAGATAGTTAAAAGTCAGCTGTCGTGTCGGGGTTaGGCTTACAGCAGCTGGATTATCAAACCTGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KEIVKSQLSCRG*AYSSWIIKPGK Trigger: TTTACCAGGTTTGATAATCCAGCTGCTGTAAGCCCAACCCCGACACGACAGCTGACTTTTAACTATCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | CATCTAGAAATGATTCTATCAGTGGTATTGTCCCCATaGTCCAATCACAGCAGAGCTCCGAAGGATTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLEMILSVVLSP*SNHSRAPKDSA Trigger: TGCTGAATCCTTCGGAGCTCTGCTGTGATTGGACCATGGGGACAATACCACTGATAGAATCATTTCTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CCA 72 bp | TATGAAGTGTTTTCAAGGCATGGGTTAGTATCACCATaGACAGACAAACCCACGAGAGCTTTTTCAGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: YEVFSRHGLVSP*TDKPTRAFSAH Trigger: GTGTGCTGAAAAAGCTCTCGTGGGTTTGTCTGTCCATGGTGATACTAACCCATGCCTTGAAAACACTTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CAA 72 bp | GATTTCGAACATCTAGAAATGATTCTATCAGTGGTATaGTCCCCATGGTCCAATCACAGCAGAGCTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DFEHLEMILSVV*SPWSNHSRAPK Trigger: CTTCGGAGCTCTGCTGTGATTGGACCATGGGGACAATACCACTGATAGAATCATTTCTAGATGTTCGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | TCTAAAATTGGCAATGCCTTTAACTCCTTAGCAGTCTaGGAATACAGGAGTGCCAGGTTAAACAAAGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKIGNAFNSLAV*EYRSARLNKAL Trigger: AAGCGCTTTGTTTAACCTGGCACTCCTGTATTCGCAGACTGCTAAGGAGTTAAAGGCATTGCCAATTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS CAA 90 bp | CACAACAAATTCCGACAACCGTTATTCCTTGTTCCTTACACAATGTaGCAACAGCCACTAAAAACACGGTTAATACAATCGGGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HNKFRQPLFLVPYTM*QQPLKTRLIQSGST Trigger: TGTGGACCCCGATTGTATTAACCGTGTTTTTAGTGGCTGTTGCAACATTGTGTAAGGAACAAGGAATAACGGTTGTCGGAATTTGTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS CAA 90 bp | AGGAGTGCCAGGTTAAACAAAGCGCTTCTGAAGTCAGGTTGTAATTaGATAGCTTTCTTCATCCAAGACTCAGCTTCTGAATCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSARLNKALLKSGCN*IAFFIQDSASESFL Trigger: CAAAAAGGATTCAGAAGCTGAGTCTTGGATGAAGAAAGCTATCAAATTACAACCTGACTTCAGAAGCGCTTTGTTTAACCTGGCACTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS CAA 90 bp | GGTCTGAGTTTAACTTCACCTGATTCCTGCATTAAAATAGCAGAATaGAACAGTGCTAGCTTATGTTTAGGGTTCAGTTCCAAAGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GLSLTSPDSCIKIAE*NSASLCLGFSSKAR Trigger: TCGAGCTTTGGAACTGAACCCTAAACATAAGCTAGCACTGTTCAATTCTGCTATTTTAATGCAGGAATCAGGTGAAGTTAAACTCAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS TCA 72 bp | AACAATGTATATTCTGACTCCCAGTCCCAATTTCTATaGAGTGTTTTCAAGGCATGGGTTAGTATCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: NNVYSDSQSQFL*SVFKAWVSITM Trigger: CATGGTGATACTAACCCATGCCTTGAAAACACTTCATAGAAATTGGGACTGGGAGTCAGAATATACATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058154.15 ENSMUST00000099318.10 |
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| CDS GCA 72 bp | CTAGCTTCAGGTCTGAGTTTAACTTCACCTGATTCCTaGATTAAAATAGCAGAATTGAACAGTGCTAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LASGLSLTSPDS*IKIAELNSASL Trigger: TAAGCTAGCACTGTTCAATTCTGCTATTTTAATGCAGGAATCAGGTGAAGTTAAACTCAGACCTGAAGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS CAA 72 bp | AGGTTAAACAAAGCGCTTCTGAAGTCAGGTTGTAATTaGATAGCTTTCTTCATCCAAGACTCAGCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLNKALLKSGCN*IAFFIQDSASE Trigger: TTCAGAAGCTGAGTCTTGGATGAAGAAAGCTATCAAATTACAACCTGACTTCAGAAGCGCTTTGTTTAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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| CDS CAA 72 bp | TTAACTTCACCTGATTCCTGCATTAAAATAGCAGAATaGAACAGTGCTAGCTTATGTTTAGGGTTCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTSPDSCIKIAE*NSASLCLGFSS Trigger: GGAACTGAACCCTAAACATAAGCTAGCACTGTTCAATTCTGCTATTTTAATGCAGGAATCAGGTGAAGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058154.15 |
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