Pregenerated sensors for TMTC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030306Ensembl transcript IDs: ENSMUST00000060095.15, ENSMUST00000100772.10, ENSMUST00000140797.4, ENSMUST00000203991.2
Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTACCTCAGCCGTaGGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: QCCNRALPEVTVPQP*GPPSGHVCTTLQPC Trigger: GCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTCTATTACAACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR CCA 90 bp | TCAGTGACTGACTCCCACTGTGTCACCAGGAGAGGACTGCCTGGCTaGCAGAGCCTGCTGTGTATAAGCAAGGCCTCCCCAACTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SVTDSHCVTRRGLPG*QSLLCISKASPTLS Trigger: GGACAGAGTTGGGGAGGCCTTGCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTGGGAGTCAGTCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | TGTAGAGTCGGCCTAGGTTCACCACAGCCACATGATGGCTTGGGCTaGGCTGGATGGCCTGCTGGTAGTGAGCCACAGCCTTCTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: CRVGLGSPQPHDGLG*AGWPAGSEPQPSQE Trigger: TTCCTGAGAAGGCTGTGGCTCACTACCAGCAGGCCATCCAGCTCAGCCCAAGCCATCATGTGGCTGTGGTGAACCTAGGCCGACTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR TCA 90 bp | GGCTGTAAGCAGCAGAGGGTTTTCCCTCGGGCCTGGCTGCACTGGTaGGATGGTTTTGCTTTCCACCTGTCATGTCTGTGTGATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GCKQQRVFPRAWLHW*DGFAFHLSCLCDGW Trigger: CCAGCCATCACACAGACATGACAGGTGGAAAGCAAAACCATCTCACCAGTGCAGCCAGGCCCGAGGGAAAACCCTCTGCTGCTTACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | TTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATCCTaGTGCTGGGCTGTAAGCAGCAGAGGGTTTTCCCTCGGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: FSLSASETAHRGTAS*CWAVSSRGFSLGPG Trigger: GCCAGGCCCGAGGGAAAACCCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | TATCCTGGGACTGGGGGTCACACAGGAGCTGGCAAAGCGTGCACTTaGTATCTCCCTTCCCTGCAGACAGTGTGCTCTCCTCTGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: YPGTGGHTGAGKACT*YLPSLQTVCSPLLF Trigger: AAACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | AGAGGATCATGGACAGGACAGTACTTCACGGGGGACAAACTCCACTaGGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RGSWTGQYFTGDKLH*DRPTCLSDAAPQSD Trigger: GTCACTCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCCCCGTGAAGTACTGTCCTGTCCATGATCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | CCAAAGCACTGCTTAATATCCTGGGACTGGGGGTCACACAGGAGCTaGCAAAGCGTGCACTTGCTATCTCCCTTCCCTGCAGACAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PKHCLISWDWGSHRS*QSVHLLSPFPADSV Trigger: CACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGGATATTAAGCAGTGCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | TGGCTGGGTCTAGGTACGATGAAGGACAGGCCTGAAAAGGAATGGTaGTGGTGGGAGGGGCTACAAGGATGTGTGTTAAGGGCTCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: WLGLGTMKDRPEKEW*WWEGLQGCVLRALC Trigger: ACACAGAGCCCTTAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACCTAGACCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | CATTGGCTGGGTCTAGGTACGATGAAGGACAGGCCTGAAAAGGAATaGTGGTGGTGGGAGGGGCTACAAGGATGTGTGTTAAGGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HWLGLGTMKDRPEKE*WWWEGLQGCVLRAL Trigger: CAGAGCCCTTAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACCTAGACCCAGCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | GTCACACAGGAGCTGGCAAAGCGTGCACTTGCTATCTCCCTTCCCTaGAGACAGTGTGCTCTCCTCTGCTGTTTGTCTCTTCATGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: VTQELAKRALAISLP*RQCALLCCLSLHGN Trigger: GTTTCCATGAAGAGACAAACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | CTGGGTCTAGGTACGATGAAGGACAGGCCTGAAAAGGAATGGTGGTaGTGGGAGGGGCTACAAGGATGTGTGTTAAGGGCTCTGTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: LGLGTMKDRPEKEWW*WEGLQGCVLRALCK Trigger: CTTACACAGAGCCCTTAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACCTAGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | CTTAGTACAGGTACTCGCCATGTACCACTACTGTCAGGAGTCTCCTaGAGGCTTCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LSTGTRHVPLLSGVS*RLLLLGGPTTDRKE Trigger: TTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGAAGCCTTCAGGAGACTCCTGACAGTAGTGGTACATGGCGAGTACCTGTACTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | CCCTGGCCTCTGGAGACACCTCAGCACCCTGGGCTCCCAGGAAAGTaGCAGGGTCACTACAAGAACTTTAAGCACATAGACTGTAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: PWPLETPQHPGLPGK*QGHYKNFKHIDCKV Trigger: TACTTTACAGTCTATGTGCTTAAAGTTCTTGTAGTGACCCTGTCACTTTCCTGGGAGCCCAGGGTGCTGAGGTGTCTCCAGAGGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | GCTGGCAAAGCGTGCACTTGCTATCTCCCTTCCCTGCAGACAGTGTaGTCTCCTCTGCTGTTTGTCTCTTCATGGAAACAACTCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: AGKACTCYLPSLQTV*SPLLFVSSWKQLFQ Trigger: TTGAAAGAGTTGTTTCCATGAAGAGACAAACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | CTGGGCTATAGTAATAATGAAGGTCACTATCTGCTGCCAAAGCACTaGTTAATATCCTGGGACTGGGGGTCACACAGGAGCTGGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LGYSNNEGHYLLPKH*LISWDWGSHRSWQS Trigger: GCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGGATATTAAGCAGTGCTTTGGCAGCAGATAGTGACCTTCATTATTACTATAGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | TTCCACCTGTCATGTCTGTGTGATGGCTGGCTCAGCATCAGGACCTaGATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: FHLSCLCDGWLSIRT*MACGVLFSVISPSK Trigger: TTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTCCTGATGCTGAGCCAGCCATCACACAGACATGACAGGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | GCCATGTACCACTACTGTCAGGAGTCTCCTGAAGGCTTCTCCTCCTaGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: AMYHYCQESPEGFSS*VDPPQTEKKGIFAY Trigger: ATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGAAGCCTTCAGGAGACTCCTGACAGTAGTGGTACATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | AAAGTAAGGGTTACTATTCTTGTCATGTTACAGACCCGGGCAACCTaGTCCTCCCGGGGGTTGTTTGTGTTTTGTTGTGGTTGTGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: KVRVTILVMLQTRAT*SSRGLFVFCCGCGA Trigger: TGCACCACAACCACAACAAAACACAAACAACCCCCGGGAGGATCAGGTTGCCCGGGTCTGTAACATGACAAGAATAGTAACCCTTACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | ACCATGGGGCACAAGCTTGCTGATGGCAAAGCAGATGCATTTTCATaGGACACCAGGCTCTGTTTCTACTGTAATAAAGATGACTCCACG | + |
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Preference number: 1 (lower is better) Translates to: TMGHKLADGKADAFS*DTRLCFYCNKDDST Trigger: CGTGGAGTCATCTTTATTACAGTAGAAACAGAGCCTGGTGTCTCATGAAAATGCATCTGCTTTGCCATCAGCAAGCTTGTGCCCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | CTACCGAGAATGATAGGAGTGGGGCCAAATCATTATCTCCACAGATaGATAGCAGTGCTTTTCAATGCACTGAAGAGGATCATGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: LPRMIGVGPNHYLHR*IAVLFNALKRIMDR Trigger: CCTGTCCATGATCCTCTTCAGTGCATTGAAAAGCACTGCTATGCATCTGTGGAGATAATGATTTGGCCCCACTCCTATCATTCTCGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | CTACCAATGCTCTTCACCACCGACTCTAGATTGTTGAGAATTAACTaGAGTTGCACAAGCGGATTTTCAAGGGCTGACTTCAGAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: LPMLFTTDSRLLRIN*SCTSGFSRADFREH Trigger: GTGTTCTCTGAAGTCAGCCCTTGAAAATCCGCTTGTGCAACTTCAGTTAATTCTCAACAATCTAGAGTCGGTGGTGAAGAGCATTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | TTCAGGGTCCCAACCTCAGTGTTAATGCACTCAGAAGGCTCAGAGTaGAGACACAACACTAGTGAAACCTGGAATACAGTTCAAACATTT | + |
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Preference number: 1 (lower is better) Translates to: FRVPTSVLMHSEGSE*RHNTSETWNTVQTF Trigger: AAATGTTTGAACTGTATTCCAGGTTTCACTAGTGTTGTGTCTCCACTCTGAGCCTTCTGAGTGCATTAACACTGAGGTTGGGACCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | AGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATaGGGCAATGACTCATTCTTTAGAATTCTTTGGCTTATTTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: SHLPVCLGVMALTNP*GNDSFFRILWLILV Trigger: GACTAAAATAAGCCAAAGAATTCTAAAGAATGAGTCATTGCCCCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR GCA 90 bp | TACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTaGTGTCTCTTTTTAAAGTTACATGTCCTGGTGGCTTTAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: YLHLQHQTRTTHIVR*CLFLKLHVLVALIR Trigger: TCTGATTAAAGCCACCAGGACATGTAACTTTAAAAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR TCA 90 bp | TGGGCTTTGCAGTATTTGGGAAATGACAACCTACAATGGAAACTGTaGTATGAAAATAAGAAAGCAAGAACAAGCCAACTCCTTAGTACA | + |
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Preference number: 1 (lower is better) Translates to: WALQYLGNDNLQWKL*YENKKARTSQLLST Trigger: TGTACTAAGGAGTTGGCTTGTTCTTGCTTTCTTATTTTCATATCACAGTTTCCATTGTAGGTTGTCATTTCCCAAATACTGCAAAGCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CCA 90 bp | TCAAACGGTTTGCAACTGATCTTCTCACAGGAAACATTTCAACCATaGAAACTATCTCACTGCCTCATTTCAATAAAGGATCCAAAATAT | + |
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Preference number: 1 (lower is better) Translates to: SNGLQLIFSQETFQP*KLSHCLISIKDPKY Trigger: ATATTTTGGATCCTTTATTGAAATGAGGCAGTGAGATAGTTTCCATGGTTGAAATGTTTCCTGTGAGAAGATCAGTTGCAAACCGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGTGAGACAGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGGAGCGCTCCCAGAGGTaGCAGTACCTCAGCCGTGCG | + |
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Preference number: 2 (lower is better) Translates to: AGVRQLPCTPPVPPCVGQERSQR*QYLSRA Trigger: CGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTC...CTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCTGTCTCACTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR-3UTR CCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGCAGGAGAGGACTGCCTaGCTGGCAGAGCCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DNLGDASPSPAIKCSAPLQERTA*LAEPAV Trigger: CACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTG...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGACAGGAGAGGACTGCCTaGCTGGCAGAGCCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRQERTA*LAEPAV Trigger: CACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTG...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGTGGGAGACCGTGTGCTaGAGGGAGGACCTCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWWETVC*REDLPT Trigger: GGTAGGGAGGTCCTCCCTCCAGCACACGGTCTCCCA...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTACCTCAGCCGTTCACCACAGCCACATaGTGGCTTGGGCTGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CVGQCCNRALPEVTVPQPFTTAT*WLGLSW Trigger: CCAGCTCAGCCCAAGCCATCATGTGGCTGTGGTGAA...CGGCTGAGGTACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAAGCCCAGCTATCAAGTaGTCTGCTCCCCTGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRSPAIK*SAPLPP Trigger: TGGAGGCAGGGGAGCAGAGCACTTGATAGCTGGGCT...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGACAGTACCTCAGCCGTaGGGGCCACCTTCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SFPVHLQCLLVSASVVIETVPQP*GPPSGH Trigger: GTGCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGT...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR CAA 90 bp | ATATCCTGGGACTGGGGGTCACACAGGAGCTGGCAAAGCGTGCACTaGCTATCTCCCTTCCCTGCAGACAGTGTGCTCTCCTCTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISWDWGSHRSWQSVH*LSPFPADSVLSSAV Trigger: AACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGGATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGGCTATCTCCCTTCCCTaGAGACAGTGTGCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: DNLGDASPSPAIKCSAPLAISLP*RQCALL Trigger: GAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGC...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGCTATCTCCCTTCCCTaGAGACAGTGTGCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRAISLP*RQCALL Trigger: GAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGGCAAAGCGTGCACTTaGTATCTCCCTTCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRGKACT*YLPSLQ Trigger: CTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGAGAGGACTGCCTGGCTaGCAGAGCCTGCTGTGTATA | + |
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Preference number: 2 (lower is better) Translates to: RNSTQRHGILMLGCKQQRRGLPG*QSLLCI Trigger: TATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATCCCTCGGGCCTGGCTaGACTGGTGAGATGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALSLGPG*TGEMVL Trigger: CAAAACCATCTCACCAGTGCAGCCAGGCCCGAGGGA...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCATGTCTGTGTGATGGCTaGCTCAGCATCAGGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPCLCDG*LSIRTC Trigger: GCAGGTCCTGATGCTGAGCCAGCCATCACACAGACA...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGACCTGAAAAGGAATGGTaGTGGTGGGAGGGGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRPEKEW*WWEGLQ Trigger: TTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGG...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCACCTTTAACACTTCTGTaGGGAGTGCAGCCCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPPLTLL*GVQPTA Trigger: AGCTGTGGGCTGCACTCCTCACAGAAGTGTTAAAGG...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAGGCAAAGCGTGCACTTaGTATCTCCCTTCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALGKACT*YLPSLQ Trigger: CTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCC...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGACCACTCTTCAGCCTTaGTGTTCTCTCCCAGGGACC | + |
|
Preference number: 2 (lower is better) Translates to: SFPVHLQCLLVSASVVIETTLQP*CSLPGT Trigger: GGTCCCTGGGAGAGAACAGCAAGGCTGAAGAGTGGT...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR-3UTR TCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGCAACACAGTCATCAGTaGCTGACTCCCACTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWQHSHQ*LTPTVS Trigger: TGACACAGTGGGAGTCAGTCACTGATGACTGTGTTG...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCACAGCTCCACACCTaGGCAACACATTTCAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRPQLHT*ATHFRV Trigger: GACCCTGAAATGTGTTGCTCAGGTGTGGAGCTGTGG...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGCAGATGCATTTTCATaGGACACCAGGCTCTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRADAFS*DTRLCF Trigger: GAAACAGAGCCTGGTGTCTCATGAAAATGCATCTGC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAGAAAAGGAATGGTGGTaGTGGGAGGGGCTACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALEKEWW*WEGLQG Trigger: TCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTC...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGAGGCCTGAAAAGGAATaGTGGTGGTGGGAGGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRRPEKE*WWWEGL Trigger: TAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCT...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGCTGCAAAAAGCCTGTaGAATTCTGCTGTAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRAAKSL*NSAVDF Trigger: GAAGTCTACAGCAGAATTTCACAGGCTTTTTGCAGC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAACAGGGCTCTACCAATaGTCTTCACCACCGACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALTGLYQ*SSPPTL Trigger: TAGAGTCGGTGGTGAAGAGCATTGGTAGAGCCCTGT...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATAGCCCAGCTATCAAGTaGTCTGCTCCCCTGCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHSPAIK*SAPLPP Trigger: TGGAGGCAGGGGAGCAGAGCACTTGATAGCTGGGCT...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGATCCCTCGGGCCTGGCTaGACTGGTGAGATGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRSLGPG*TGEMVL Trigger: CAAAACCATCTCACCAGTGCAGCCAGGCCCGAGGGA...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGAAGAACTTCAGGAATaGTATGCTGGGGTTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLREELQE*YAGVQN Trigger: GTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCACTGCTTAATATCCTaGGACTGGGGGTCACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLVIIWAMLAQAQLSSALHCLIS*DWGSHR Trigger: CCTGTGTGACCCCCAGTCCCAGGATATTAAGCAGTG...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATCCACAGCTCCACACCTaGGCAACACATTTCAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHPQLHT*ATHFRV Trigger: GACCCTGAAATGTGTTGCTCAGGTGTGGAGCTGTGG...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGCTGGTGAGATGGTTTTaGTTTCCACCTGTCATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWLVRWF*FPPVMS Trigger: AGACATGACAGGTGGAAAGCAAAACCATCTCACCAG...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCTGGGATTAAAGGTGTaGACCACCACCACCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMLGLKV*TTTTWL Trigger: GAGCCAGGTGGTGGTGGTGCACACCTTTAATCCCAG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATAGAGGACTGCCTGGCTaGCAGAGCCTGCTGTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHRGLPG*QSLLCI Trigger: TATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCT...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAAGTAGAGCCCTTCCCTaGACAGACCCTTTAACACTT | + |
|
Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALSRALP*TDPLTL Trigger: AAGTGTTAAAGGGTCTGTCCAGGGAAGGGCTCTACT...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAGCATCAGGACCTGCATaGCCTGTGGTGTTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALASGPA*PVVFCF Trigger: AAAACAAAACACCACAGGCCATGCAGGTCCTGATGC...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGGTGTTTACAGGACTTTaGGTTTCTGTATTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWVFTGL*VSVFLG Trigger: GCCCAGAAATACAGAAACTCAAAGTCCTGTAAACAC...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCGGATTTTCAAGGGCTaGCTTCAGAGAACACATCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLVIIWAMLAQAQLSSALRIFKG*LQRTHP Trigger: AGGATGTGTTCTCTGAAGTCAGCCCTTGAAAATCCG...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGACCAGTTAGGAACAGCTaGTTACCTACATTTACAACA | + |
|
Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRPVRNS*LPTFTT Trigger: TGTTGTAAATGTAGGTAATCAGCTGTTCCTAACTGG...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCTCAGCATCAGGACCTaGATGGCCTGTGGTGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMLSIRT*MACGVL Trigger: CAAAACACCACAGGCCATGCAGGTCCTGATGCTGAG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | TGCGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGCTGTTCTCTCGGCATCAGCAAAATCTaGACCATATTTAATGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: CGPPSGHVCTTLQPCCSLGISKI*TIFNGF Trigger: GAATCCATTAAATATGGTCCAGATTTTGCTGATGCC...GAGAGAACAGCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGTTGTTGAGAATTAACTaGAGTTGCACAAGCGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: RNSTQRHGILMLGCKQQRLLRIN*SCTSGF Trigger: AAATCCGCTTGTGCAACTTCAGTTAATTCTCAACAA...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTAGCTATCAAGTGCTCTaGTCCCCTGCCTCCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSSYQVL*SPASTG Trigger: CCCTGTGGAGGCAGGGGAGCAGAGCACTTGATAGCT...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTAGCTATCAAGTGCTCTaGTCCCCTGCCTCCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFSYQVL*SPASTG Trigger: CCCTGTGGAGGCAGGGGAGCAGAGCACTTGATAGCT...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGTTACTTCAGCTTATCTaGTTCAGAAACAGCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWLLQLI*FRNSTQ Trigger: CTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAA...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGTCAACTCCCTCGCCATaGCTTTCCAAATACATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRSTPSP*LSKYIS Trigger: GGAAATGTATTTGGAAAGGCATGGCGAGGGAGTTGA...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATGCTGCACTGGTGAGATaGTTTTGCTTTCCACCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHAALVR*FCFPPV Trigger: GACAGGTGGAAAGCAAAACCATCTCACCAGTGCAGC...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGGGTTTACGCTGTAGTTaGCTTTTAATTACTCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLPVCLGVMALTNPWGLRCS*LLITLA Trigger: TGCTAGAGTAATTAAAAGGCAACTACAGCGTAAACC...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTGGGATTAAAGGTGTaGACCACCACCACCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSLGLKV*TTTTWL Trigger: GAGCCAGGTGGTGGTGGTGCACACCTTTAATCCCAG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAACACACATTGTGAGGTaGTGTCTCTTTTTAAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GTNSTETDQPASAMQLLRTHIVR*CLFLKL Trigger: TAACTTTAAAAAGAGACAGCACCTCACAATGTGTGT...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTAAGGAATGGTGGTGGTaGGAGGGGCTACAAGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPKEWWW*EGLQGC Trigger: ACATCCTTGTAGCCCCTCCCACCACCACCATTCCTT...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR-3UTR CCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTCCTTGTAGCCCAGGCTaGGCTGTAAGTCAGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFPCSPG*AVSQSS Trigger: GGAACTCTGACTTACAGCCCAGCCTGGGCTACAAGG...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCACTTGGTTTTGAGAGCTaGTATCAAAATGACTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPLGFES*YQNDYV Trigger: TACATAGTCATTTTGATAGCAGCTCTCAAAACCAAG...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTACTGTTTGTCTCTTCATaGAAACAACTCTTTCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: PTPEPHKQTRAPRPQRALLFVSS*KQLFQH Trigger: GTGTTGAAAGAGTTGTTTCCATGAAGAGACAAACAG...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCACTGCTTAATATCCTaGGACTGGGGGTCACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSHCLIS*DWGSHR Trigger: CCTGTGTGACCCCCAGTCCCAGGATATTAAGCAGTG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATTCAGAAGGCTCAGAGTaGAGACACAACACTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHSEGSE*RHNTSE Trigger: TTCACTAGTGTTGTGTCTCCACTCTGAGCCTTCTGA...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGGAAACATTTCAACCATaGAAACTATCTCACTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRETFQP*KLSHCL Trigger: GAGGCAGTGAGATAGTTTCCATGGTTGAAATGTTTC...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTCAACACAGTCATCAGTaGCTGACTCCCACTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFQHSHQ*LTPTVS Trigger: TGACACAGTGGGAGTCAGTCACTGATGACTGTGTTG...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACTAGCAAGTGTATACTaGGACCACCTGAAGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKLASVY*DHLKCF Trigger: AAAGCACTTCAGGTGGTCTCAGTATACACTTGCTAG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACTGGTGAGATGGTTTTaGTTTCCACCTGTCATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKLVRWF*FPPVMS Trigger: AGACATGACAGGTGGAAAGCAAAACCATCTCACCAG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAATCAGAAGGCTCAGAGTaGAGACACAACACTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKSEGSE*RHNTSE Trigger: TTCACTAGTGTTGTGTCTCCACTCTGAGCCTTCTGA...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTAGTAGAGCCCTTCCCTaGACAGACCCTTTAACACTT | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPSRALP*TDPLTL Trigger: AAGTGTTAAAGGGTCTGTCCAGGGAAGGGCTCTACT...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTCTTTGGTACCTTGCCTaGTACATGCACGTAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFLWYLA*YMHVAR Trigger: CCTTGCTACGTGCATGTACCAGGCAAGGTACCAAAG...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 90 bp | CTAAGAGCCCAAAGAAATCATGGGTTTGTTTTTCATTTGTTATCTTaGGTACCTTGCCTGGTACATGCACGTAGCAAGGTGGTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LRAQRNHGFVFHLLS*VPCLVHARSKVVPL Trigger: GAGAGGCACCACCTTGCTACGTGCATGTACCAGGCAAGGTACCAAAGATAACAAATGAAAAACAAACCCATGATTTCTTTGGGCTCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGATTATTTAGTCTTGGCTaGAAGCTGCAAAAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRLFSLG*KLQKAC Trigger: ACAGGCTTTTTGCAGCTTTCAGCCAAGACTAAATAA...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTGAAGAACTTCAGGAATaGTATGCTGGGGTTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPEELQE*YAGVQN Trigger: GTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTC...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTGCATCAGGACCTGCATaGCCTGTGGTGTTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFASGPA*PVVFCF Trigger: AAAACAAAACACCACAGGCCATGCAGGTCCTGATGC...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTTCAGGAATGCTATGCTaGGGTTCAGAACAGGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPSGMLC*GSEQVK Trigger: CTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 90 bp | GGACACCTTCTAAGAGCCCAAAGAAATCATGGGTTTGTTTTTCATTaGTTATCTTTGGTACCTTGCCTGGTACATGCACGTAGCAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GHLLRAQRNHGFVFH*LSLVPCLVHARSKV Trigger: CACCTTGCTACGTGCATGTACCAGGCAAGGTACCAAAGATAACAAATGAAAAACAAACCCATGATTTCTTTGGGCTCTTAGAAGGTGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTGTGTTTACAGGACTTTaGGTTTCTGTATTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPVFTGL*VSVFLG Trigger: GCCCAGAAATACAGAAACTCAAAGTCCTGTAAACAC...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATTTGTTGAGAATTAACTaGAGTTGCACAAGCGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: QPFTSAYLLQKQHTEARHLLRIN*SCTSGF Trigger: AAATCCGCTTGTGCAACTTCAGTTAATTCTCAACAA...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAGAGCTGCTATCAAAATaGCTATGTACAGAGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRELLSK*LCTEEK Trigger: TTTTTCCTCTGTACATAGTCATTTTGATAGCAGCTC...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTTTTGGTCTATTCACCTaGGTTCTACCACCAAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPFGLFT*VLPPNQ Trigger: CTGATTTGGTGGTAGAACGCAGGTGAATAGACCAAA...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAAGGTTTACGCTGTAGTTaGCTTTTAATTACTCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKGLRCS*LLITLA Trigger: TGCTAGAGTAATTAAAAGGCAACTACAGCGTAAACC...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCGGTCTCCATATTTTTaGTCTATTCACCTGCGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSRSPYF*SIHLRS Trigger: AGAACGCAGGTGAATAGACCAAAAATATGGAGACCG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTAATCTCAAAAGTCAATaGCAGAGCTCTTTTCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSNLKSQ*QSSFPS Trigger: TGAGGGAAAAGAGCTCTGTCATTGACTTTTGAGATT...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTTTACTTCAGCTTATCTaGTTCAGAAACAGCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFLLQLI*FRNSTQ Trigger: CTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAA...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGTGCTTATTTTTAACTaGTTCAGGAGATGCCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KKNFRNAMLGFRTGKASPVLIFN*FRRCQS Trigger: ACTTTGGCATCTCCTGAAGCAGTTAAAAATAAGCAC...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTAAGCCTGTGAAATTCTaGTGTAGACTTCAAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPKPVKF*CRLQKR Trigger: TCTCTTTTGAAGTCTACAGCAGAATTTCACAGGCTT...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTAGCTTATATAGCTaGTGTCTGGGAGTAAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSLSLYS*CLGVRF Trigger: AAACCTTACTCCCAGACAGCAGCTATATAAGCTAAG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGAGCTGCACTGGTGAGATaGTTTTGCTTTCCACCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRAALVR*FCFPPV Trigger: GACAGGTGGAAAGCAAAACCATCTCACCAGTGCAGC...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTGAGCTGCTATCAAAATaGCTATGTACAGAGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SGMLCWGSEQVKQVLICFELLSK*LCTEEK Trigger: TTTTTCCTCTGTACATAGTCATTTTGATAGCAGCTC...AAAACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTCTTGGTTTTGAGAGCTaGTATCAAAATGACTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPLGFES*YQNDYV Trigger: TACATAGTCATTTTGATAGCAGCTCTCAAAACCAAG...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 90 bp | CGTCACAAGGACCAAATAGCATGTTACAAAATACACTCAAACGGTTaGCAACTGATCTTCTCACAGGAAACATTTCAACCATGGAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: RHKDQIACYKIHSNG*QLIFSQETFQPWKL Trigger: TAGTTTCCATGGTTGAAATGTTTCCTGTGAGAAGATCAGTTGCAAACCGTTTGAGTGTATTTTGTAACATGCTATTTGGTCCTTGTGACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGAGTTTGTGTTTTGTTGTaGTTGTGGTGCACACTACCG | + |
|
Preference number: 2 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRVCVLL*LWCTLP Trigger: CGGTAGTGTGCACCACAACCACAACAAAACACAAAC...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR GCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGAAGCAGTGCTTTTCAATaGACTGAAGAGGATCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRSSAFQ*TEEDHG Trigger: TCCATGATCCTCTTCAGTGCATTGAAAAGCACTGCT...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGATTCATTTGTTATCTTTaGTACCTTGCCTGGTACATG | + |
|
Preference number: 2 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRFICYL*YLAWYM Trigger: CATGTACCAGGCAAGGTACCAAAGATAACAAATGAA...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | GTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTaGCAGTACCTCAGCCGTGCGGGCCACCTTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSASVVIERSQR*QYLSRAGHLQG Trigger: GCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| 3UTR TCA 72 bp | GGCCTAGGTTCACCACAGCCACATGATGGCTTGGGCTaGGCTGGATGGCCTGCTGGTAGTGAGCCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLGSPQPHDGLG*AGWPAGSEPQP Trigger: AGGCTGTGGCTCACTACCAGCAGGCCATCCAGCTCAGCCCAAGCCATCATGTGGCTGTGGTGAACCTAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| 3UTR GCA 72 bp | CCTGGGACTGGGGGTCACACAGGAGCTGGCAAAGCGTaGACTTGCTATCTCCCTTCCCTGCAGACAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGTGGHTGAGKA*TCYLPSLQTVC Trigger: GCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | GACTCCCACTGTGTCACCAGGAGAGGACTGCCTGGCTaGCAGAGCCTGCTGTGTATAAGCAAGGCCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DSHCVTRRGLPG*QSLLCISKASP Trigger: TGGGGAGGCCTTGCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTGGGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | CTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTaGCTCCACAGGGCTCTACCAATGCTCTTCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: LAQAQLSSALLP*LHRALPMLFTT Trigger: GGTGGTGAAGAGCATTGGTAGAGCCCTGTGGAGGCAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | AATAGAGCGCTCCCAGAGGTGACAGTACCTCAGCCGTaGGGGCCACCTTCAGGGCACGTCTGTACCACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NRALPEVTVPQP*GPPSGHVCTTL Trigger: AAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| 3UTR CCA 72 bp | TTCTCTAAAGGCAGCCAGTGCTGGGAGACCGTGTGCTaGAGGGAGGACCTCCCTACCAACCCATGCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSKGSQCWETVC*REDLPTNPCCS Trigger: AGAGCAGCATGGGTTGGTAGGGAGGTCCTCCCTCCAGCACACGGTCTCCCAGCACTGGCTGCCTTTAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | GGTACTCGCCATGTACCACTACTGTCAGGAGTCTCCTaGAGGCTTCTCCTCCTGGGTGGACCCACCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GTRHVPLLSGVS*RLLLLGGPTTD Trigger: GTCTGTGGTGGGTCCACCCAGGAGGAGAAGCCTTCAGGAGACTCCTGACAGTAGTGGTACATGGCGAGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | ACTGGGGGTCACACAGGAGCTGGCAAAGCGTGCACTTaGTATCTCCCTTCCCTGCAGACAGTGTGCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGGHTGAGKACT*YLPSLQTVCSP Trigger: AGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | AATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTaGTCTGCTCCCCTGCCTCCACAGGGCTCTACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NLGDASPSPAIK*SAPLPPQGSTN Trigger: ATTGGTAGAGCCCTGTGGAGGCAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | AGAGCCCTTCCCTGGACAGACCCTTTAACACTTCTGTaGGGAGTGCAGCCCACAGCTCCACACCTGAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RALPWTDPLTLL*GVQPTAPHLSN Trigger: GTTGCTCAGGTGTGGAGCTGTGGGCTGCACTCCTCACAGAAGTGTTAAAGGGTCTGTCCAGGGAAGGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | ACCCATGATGAGACCCTGCTAGGACAAAGCCAGCTCTaGCCCCAGGCGTCAGAACAGCTCTCCAGTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: THDETLLGQSQL*PQASEQLSSYH Trigger: ATGGTAACTGGAGAGCTGTTCTGACGCCTGGGGGCAGAGCTGGCTTTGTCCTAGCAGGGTCTCATCATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | AAACAAGCCCTGGCCTCTGGAGACACCTCAGCACCCTaGGCTCCCAGGAAAGTGACAGGGTCACTACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQALASGDTSAP*APRKVTGSLQE Trigger: TTCTTGTAGTGACCCTGTCACTTTCCTGGGAGCCCAGGGTGCTGAGGTGTCTCCAGAGGCCAGGGCTTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | CAGCAGAGGGTTTTCCCTCGGGCCTGGCTGCACTGGTaGGATGGTTTTGCTTTCCACCTGTCATGTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QQRVFPRAWLHW*DGFAFHLSCLC Trigger: ACACAGACATGACAGGTGGAAAGCAAAACCATCTCACCAGTGCAGCCAGGCCCGAGGGAAAACCCTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | TGCTTAATATCCTGGGACTGGGGGTCACACAGGAGCTaGCAAAGCGTGCACTTGCTATCTCCCTTCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLISWDWGSHRS*QSVHLLSPFPA Trigger: TGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTCCCAGGATATTAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | GAGCTGGCAAAGCGTGCACTTGCTATCTCCCTTCCCTaGAGACAGTGTGCTCTCCTCTGCTGTTTGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ELAKRALAISLP*RQCALLCCLSL Trigger: AAGAGACAAACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | GGTTTTGCTTTCCACCTGTCATGTCTGTGTGATGGCTaGCTCAGCATCAGGACCTGCATGGCCTGTGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GFAFHLSCLCDG*LSIRTCMACGV Trigger: AACACCACAGGCCATGCAGGTCCTGATGCTGAGCCAGCCATCACACAGACATGACAGGTGGAAAGCAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | GGTACGATGAAGGACAGGCCTGAAAAGGAATGGTGGTaGTGGGAGGGGCTACAAGGATGTGTGTTAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTMKDRPEKEWW*WEGLQGCVLRA Trigger: AGCCCTTAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CTAGGTACGATGAAGGACAGGCCTGAAAAGGAATGGTaGTGGTGGGAGGGGCTACAAGGATGTGTGTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGTMKDRPEKEW*WWEGLQGCVLR Trigger: CCTTAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | GGTCTAGGTACGATGAAGGACAGGCCTGAAAAGGAATaGTGGTGGTGGGAGGGGCTACAAGGATGTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLGTMKDRPEKE*WWWEGLQGCVL Trigger: TAACACACATCCTTGTAGCCCCTCCCACCACCACCATTCCTTTTCAGGCCTGTCCTTCATCGTACCTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CACTACTGTCAGGAGTCTCCTGAAGGCTTCTCCTCCTaGGTGGACCCACCACAGACAGAAAAGAAAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: HYCQESPEGFSS*VDPPQTEKKGI Trigger: AATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGAAGCCTTCAGGAGACTCCTGACAGTAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGGCTCTCCTCTGCTGTTaGTCTCTTCATGGAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLSHLPVCLGVMALTNPWALLCC*SLHGNN Trigger: GTTGTTTCCATGAAGAGACAAACAGCAGAGGAGAGC...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTAGTAGGGAAGCCAAGCTaGAATAGGCATCAGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPPCVGQCCNRALPEVTVVGKPS*NRHQQN Trigger: ATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTAC...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGTGTGTTTACAGGACTTaGAGTTTCTGTATTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNSTQRHGILMLGCKQQRCVYRT*SFCISG Trigger: CCCAGAAATACAGAAACTCAAAGTCCTGTAAACACA...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | TCATGTCTGTGTGATGGCTGGCTCAGCATCAGGACCTaGATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SCLCDGWLSIRT*MACGVLFSVIS Trigger: GCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTCCTGATGCTGAGCCAGCCATCACACAGACATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | AACCTGATCCTCCCGGGGGTTGTTTGTGTTTTGTTGTaGTTGTGGTGCACACTACCGAGAATGATAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NLILPGVVCVLL*LWCTLPRMIGV Trigger: CACTCCTATCATTCTCGGTAGTGTGCACCACAACCACAACAAAACACAAACAACCCCCGGGAGGATCAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | GTTACTATTCTTGTCATGTTACAGACCCGGGCAACCTaGTCCTCCCGGGGGTTGTTTGTGTTTTGTTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VTILVMLQTRAT*SSRGLFVFCCG Trigger: ACCACAACAAAACACAAACAACCCCCGGGAGGATCAGGTTGCCCGGGTCTGTAACATGACAAGAATAGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | GCTATCTCCCTTCCCTGCAGACAGTGTGCTCTCCTCTaGTGTTTGTCTCTTCATGGAAACAACTCTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AISLPCRQCALL*CLSLHGNNSFN Trigger: GTTGAAAGAGTTGTTTCCATGAAGAGACAAACAGCAGAGGAGAGCACACTGTCTGCAGGGAAGGGAGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | AGTAATAATGAAGGTCACTATCTGCTGCCAAAGCACTaGTTAATATCCTGGGACTGGGGGTCACACAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNNEGHYLLPKH*LISWDWGSHRS Trigger: GCTCCTGTGTGACCCCCAGTCCCAGGATATTAAGCAGTGCTTTGGCAGCAGATAGTGACCTTCATTATTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATGTGTTTACAGGACTTaGAGTTTCTGTATTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTPEPHKQTRAPRPQRALCVYRT*SFCISG Trigger: CCCAGAAATACAGAAACTCAAAGTCCTGTAAACACA...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAGTCCTGATTTGTTTTTaGTCTCCTTCCTACCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRVLICF*SPSYLR Trigger: CCTTAGGTAGGAAGGAGACAAAAAACAAATCAGGAC...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CCAACCTCAGTGTTAATGCACTCAGAAGGCTCAGAGTaGAGACACAACACTAGTGAAACCTGGAATACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTSVLMHSEGSE*RHNTSETWNTV Trigger: AACTGTATTCCAGGTTTCACTAGTGTTGTGTCTCCACTCTGAGCCTTCTGAGTGCATTAACACTGAGGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CTCAAAGAGCACTATTCCCCACGGTCTCCATATTTTTaGTCTATTCACCTGCGTTCTACCACCAAATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKEHYSPRSPYF*SIHLRSTTKSG Trigger: ACCTGATTTGGTGGTAGAACGCAGGTGAATAGACCAAAAATATGGAGACCGTGGGGAATAGTGCTCTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | CTCTTCACCACCGACTCTAGATTGTTGAGAATTAACTaGAGTTGCACAAGCGGATTTTCAAGGGCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFTTDSRLLRIN*SCTSGFSRADF Trigger: GAAGTCAGCCCTTGAAAATCCGCTTGTGCAACTTCAGTTAATTCTCAACAATCTAGAGTCGGTGGTGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | AAAAAGCAGGTGTGTGTTGGATCAACTCCCTCGCCATaGCTTTCCAAATACATTTCCAGCCATTTACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KKQVCVGSTPSP*LSKYISSHLLQ Trigger: CTGAAGTAAATGGCTGGAAATGTATTTGGAAAGGCATGGCGAGGGAGTTGATCCAACACACACCTGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | GCTCTGTGTAAGGAAAGAAGAACTTCAGGAATGCTATaGTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ALCKERRTSGML*WGSEQVKQVLI Trigger: AATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTTTCCTTACACAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | GTGTGTGTGCCAATGGGAGATATTCTGATCTCTGCATaGAGATGTTTCCAGTTAGGAACAGCTGATTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VCVPMGDILISA*RCFQLGTADYL Trigger: TAGGTAATCAGCTGTTCCTAACTGGAAACATCTGCATGCAGAGATCAGAATATCTCCCATTGGCACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | GATCTCTGCATGCAGATGTTTCCAGTTAGGAACAGCTaGTTACCTACATTTACAACATCAGACCAGGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: DLCMQMFPVRNS*LPTFTTSDQDY Trigger: GTAGTCCTGGTCTGATGTTGTAAATGTAGGTAATCAGCTGTTCCTAACTGGAAACATCTGCATGCAGAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | TATACCAGAGTAGCATTTAATGTACTTCTCCAAAAGTaGTTAGTGATAATCTGGGCGATGCTAGCCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YTRVAFNVLLQK*LVIIWAMLAQA Trigger: GGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCACTTTTGGAGAAGTACATTAAATGCTACTCTGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | TTACAACATCAGACCAGGACTACACACATTGTGAGGTaGTGTCTCTTTTTAAAGTTACATGTCCTGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQHQTRTTHIVR*CLFLKLHVLVA Trigger: AGCCACCAGGACATGTAACTTTAAAAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | TCATTATCTCCACAGATGCATAGCAGTGCTTTTCAATaGACTGAAGAGGATCATGGACAGGACAGTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSPQMHSSAFQ*TEEDHGQDSTS Trigger: TGAAGTACTGTCCTGTCCATGATCCTCTTCAGTGCATTGAAAAGCACTGCTATGCATCTGTGGAGATAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CTGTGTAAGGAAAGAAGAACTTCAGGAATGCTATGCTaGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LCKERRTSGMLC*GSEQVKQVLIC Trigger: ACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTTTCCTTACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTGCAATTTTCATATGCTaGGTTTTGAGAGCTGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPAIFIC*VLRAAI Trigger: GATAGCAGCTCTCAAAACCAAGCATATGAAAATTGC...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTTTTAATGGCATCCCCTaGGTAAAAGTCACAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFFNGIP*VKVTNL Trigger: GAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | CACAAGCTTGCTGATGGCAAAGCAGATGCATTTTCATaGGACACCAGGCTCTGTTTCTACTGTAATAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HKLADGKADAFS*DTRLCFYCNKD Trigger: ATCTTTATTACAGTAGAAACAGAGCCTGGTGTCTCATGAAAATGCATCTGCTTTGCCATCAGCAAGCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | GTCTTGGCTGAAAGCTGCAAAAAGCCTGTGAAATTCTaGTGTAGACTTCAAAAGAGAACCTGCATACTAATG | + |
|
Preference number: 3 (lower is better) Translates to: VLAESCKKPVKF*CRLQKRTCILM Trigger: CATTAGTATGCAGGTTCTCTTTTGAAGTCTACAGCAGAATTTCACAGGCTTTTTGCAGCTTTCAGCCAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGAGCTCTCCTCTGCTGTTaGTCTCTTCATGGAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRALLCC*SLHGNN Trigger: GTTGTTTCCATGAAGAGACAAACAGCAGAGGAGAGC...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | CTGACTTCAGAGAACACATCCTTTCTTAGGAACAGCTaGTGTGTTTACAGGACTTTGAGTTTCTGTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LTSENTSFLRNS*CVYRTLSFCIS Trigger: AGAAATACAGAAACTCAAAGTCCTGTAAACACAGCAGCTGTTCCTAAGAAAGGATGTGTTCTCTGAAGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | CTGCTGTGTTTACAGGACTTTGAGTTTCTGTATTTCTaGGCTATAGTAATAATGAAGGTCACTATCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLCLQDFEFLYF*AIVIMKVTICC Trigger: GCAGCAGATAGTGACCTTCATTATTACTATAGCCCAGAAATACAGAAACTCAAAGTCCTGTAAACACAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR TCA 72 bp | GCATCTATTTTGTTAAATACTATTATAACTAAGAGGTaGCTTTTACCAAGGGTCCCTGCCATCCAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASILLNTIITKR*LLPRVPAIQLR Trigger: CCTAAGTTGGATGGCAGGGACCCTTGGTAAAAGTCACCTCTTAGTTATAATAGTATTTAACAAAATAGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR GCA 72 bp | TCACAGGAAACATTTCAACCATGGAAACTATCTCACTaGCTCATTTCAATAAAGGATCCAAAATATCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQETFQPWKLSH*LISIKDPKYLG Trigger: GCCTAGATATTTTGGATCCTTTATTGAAATGAGGCAGTGAGATAGTTTCCATGGTTGAAATGTTTCCTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | TTGCAACTGATCTTCTCACAGGAAACATTTCAACCATaGAAACTATCTCACTGCCTCATTTCAATAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LQLIFSQETFQP*KLSHCLISIKD Trigger: ATCCTTTATTGAAATGAGGCAGTGAGATAGTTTCCATGGTTGAAATGTTTCCTGTGAGAAGATCAGTTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CCA 72 bp | ATAGTATTACCTGTAAAAGGATGCCATTTAGATACTTaGGCTTTGCAGTATTTGGGAAATGACAACCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: IVLPVKGCHLDT*ALQYLGNDNLQ Trigger: TTGTAGGTTGTCATTTCCCAAATACTGCAAAGCCCAAGTATCTAAATGGCATCCTTTTACAGGTAATACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCACGCCATCAGGGAGGTaGCCCCGCACCGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISTPSGR*PRTGSA Trigger: GGCTGAGCCGGTGCGGGGCCACCTCCCTGATGGCGT...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGACGCCATCAGGGAGGTaGCCCCGCACCGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLQCLLVSASVVIERSQTPSGR*PRTGSA Trigger: GGCTGAGCCGGTGCGGGGCCACCTCCCTGATGGCGT...CTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGTGGGGGTGGGCTTGCTaGGAGGAAGGCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLWGWAC*EEGWGL Trigger: GAGCCCCCAGCCTTCCTCTCAGCAAGCCCACCCCCA...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGTGGGGGTGGGCTTGCTaGGAGGAAGGCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPVPPCVGQCCNRALPEWGWAC*EEGWGL Trigger: GAGCCCCCAGCCTTCCTCTCAGCAAGCCCACCCCCA...CTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGTGAGACAGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGAGTGCACGGTTGTGCTaGGGGTGGAGCTGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGVRQLPCTPPVPPCVGQSARLC*GWSCNA Trigger: GGCATTGCAGCTCCACCCGCAGCACAACCGTGCACT...CTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCTGTCTCACTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR CCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGCGTAGCAAAGGCAGCTaGCCCCAGCTAGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLRSKGS*PQLAAP Trigger: CGGCGCTGCTAGCTGGGGCCAGCTGCCTTTGCTACG...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGTGCCCAGAGCTGTGCTaGCAGACCGCCCCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLCPELC*QTAPLL Trigger: GAGCAATGGGGCGGTCTGTCAGCACAGCTCTGGGCA...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCCATGATGGCTTGGGCTaGGCTGGATGGCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISHDGLG*AGWPAG Trigger: ACCAGCAGGCCATCCAGCTCAGCCCAAGCCATCATG...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGGGAAGCGCTGCTTTCTaGTCTCACGGTGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRGSAAF*SHGGGG Trigger: CCCACCCCCACCGTGAGAGCAGAAAGCAGCGCTTCC...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCAGTGCACGGTTGTGCTaGGGGTGGAGCTGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISSARLC*GWSCNA Trigger: GGCATTGCAGCTCCACCCGCAGCACAACCGTGCACT...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGAGGCTGGGGGCTCCCTaGCTGCCCAGAGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIERLGAP*LPRAVL Trigger: CAGCACAGCTCTGGGCAGCCAGGGAGCCCCCAGCCT...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| 3UTR CAA 72 bp | GACTGGGGGTCACACAGGAGCTGGCAAAGCGTGCACTaGCTATCTCCCTTCCCTGCAGACAGTGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DWGSHRSWQSVH*LSPFPADSVLS Trigger: GGAGAGCACACTGTCTGCAGGGAAGGGAGATAGCAAGTGCACGCTTTGCCAGCTCCTGTGTGACCCCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | ACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGGGGAAGCACTGCCCTaGACAGCCCTGATCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TPPVPPCVGQCCNRALPEGEALP*TALIQT Trigger: AGTCTGGATCAGGGCTGTGCAGGGCAGTGCTTCCCC...CTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGAGTGCACGGTTGTGCTaGGGGTGGAGCTGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLSARLC*GWSCNA Trigger: GGCATTGCAGCTCCACCCGCAGCACAACCGTGCACT...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCAACAGTACCTCAGCCGTaGGGGCCACCTTCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPTVPQP*GPPSGH Trigger: GTGCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGT...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTACTCTGGTGGCAATGGTaGATGGCAGCCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCVGQCCNRALPEVTVLWWQW*MAASPG Trigger: TCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAG...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCGTTCATCCATGCCTGTaGCTGGTCAGGATCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISVHPCL*LVRIQG Trigger: ACCCTGGATCCTGACCAGGCACAGGCATGGATGAAC...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGGGACAGCACGCACAGTaGCCGATAGGACTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRGQHAQ*PIGLVA Trigger: AGCCACAAGTCCTATCGGCCACTGTGCGTGCTGTCC...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGGGTGGCAATGGTGAATaGCAGCCTCCCCAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLQCLLVSASVVIERSQGGNGE*QPPQES Trigger: AGACTCCTGGGGAGGCTGCCATTCACCATTGCCACC...CTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTACTCTGGTGGCAATGGTaGATGGCAGCCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALLWWQW*MAASPG Trigger: TCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAG...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCATGTGCTCCAGCCTCTTaGAGGCTGCCACACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPCAPAS*RLPHSA Trigger: TGCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACA...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GGGACAAACTCCACTGAGACAGACCAACCTGCCTCAGCGATGCAGCTCCTCAGAGGTTGCTGGCTGGAATaGACGGGAACACGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTNSTETDQPASAMQLLRGCWLE*TGTRGT Trigger: TGTTCCTCGTGTTCCCGTTCATTCCAGCCAGCAACC...TCTGAGGAGCTGCATCGCTGAGGCAGGTTGGTCTGTCTCAGTGGAGTTTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGACATGGGGAATCCACTaGTCTTGGGCTCTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLTWGIH*SWALVA Trigger: TGCCACCAGAGCCCAAGAGCAGTGGATTCCCCATGT...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | ACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGACATGGGGAATCCACTaGTCTTGGGCTCTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPVPPCVGQCCNRALPETWGIH*SWALVA Trigger: TGCCACCAGAGCCCAAGAGCAGTGGATTCCCCATGT...CTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTACCTCAGCCGCCCAAGGTTGTTCAGTaGACTTGCGTGGCGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVGQCCNRALPEVTVPQPPKVVQ*TCVAWV Trigger: TACCCACGCCACGCAAGTGCACTGAACAACCTTGGG...CGGCTGAGGTACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGCCTGGATGTGCCGGATaGCACCCATGTTCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLPGCAG*HPCSSM Trigger: CATGGATGAACATGGGTGGCATCCGGCACATCCAGG...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGCCAGGAGTCTTTGTGTaGGAAGCGCTGCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVPPCVGQCCNRALPEVPGVFV*EALLSA Trigger: AGCAGAAAGCAGCGCTTCCCACACAAAGACTCCTGG...CACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGATCCATGCCTGTGCCTaGTCAGGATCCAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRIHACA*SGSRVT Trigger: TGTGACCCTGGATCCTGACCAGGCACAGGCATGGAT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGTGTGCTCCAGCCTCTTaGAGGCTGCCACACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIECAPAS*RLPHSA Trigger: TGCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACA...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTAGGTTGCTGGCTGGAATaGACGGGAACACGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCVGQCCNRALPEVTVGCWLE*TGTRGT Trigger: TGTTCCTCGTGTTCCCGTTCATTCCAGCCAGCAACC...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGGGAAGCGCTGCTTTCTaGTCTCACGGTGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLGSAAF*SHGGGG Trigger: CCCACCCCCACCGTGAGAGCAGAAAGCAGCGCTTCC...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCAACATGGGGAATCCACTaGTCTTGGGCTCTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPTWGIH*SWALVA Trigger: TGCCACCAGAGCCCAAGAGCAGTGGATTCCCCATGT...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TGCGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGCTGTTCTCTCGCACAGAGTGATGGGTaGCAGCAGAAGCCATACATT | + |
|
Preference number: 4 (lower is better) Translates to: CGPPSGHVCTTLQPCCSLAQSDG*QQKPYI Trigger: AATGTATGGCTTCTGCTGGCACCCATCACTCTGTGC...GAGAGAACAGCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCAAAGGCTGCCACACAGTaGAGGCTCAGTAAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPKAATQ*RLSKAI Trigger: GATGGCCTTACTGAGCCTGCACTGTGTGGCAGCCTT...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTACTCTATGGCCTCGAGTaGCTTCCCATGGTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALLYGLE*LPMVLL Trigger: CAGGAGCACCATGGGAAGGCACTCGAGGCCATAGAG...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAAAGGCTGGGGGCTCCCTaGCTGCCCAGAGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKRLGAP*LPRAVL Trigger: CAGCACAGCTCTGGGCAGCCAGGGAGCCCCCAGCCT...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGCCAGGAGTCTTTGTGTaGGAAGCGCTGCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLPGVFV*EALLSA Trigger: AGCAGAAAGCAGCGCTTCCCACACAAAGACTCCTGG...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTGAGACAGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGGAAGGAAATTTCTGTTaGTGCTCCCAGTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: AGVRQLPCTPPVPPCVGQEGNFC*CSQSDT Trigger: GGTGTCTGACTGGGAGCACCAACAGAAATTTCCTTC...CTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCTGTCTCACTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCCTTCTGCCATGTCCTTaGTCAGTGTCCCAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISLLPCP*SVSQGC Trigger: ACAACCTTGGGACACTGACCAAGGACATGGCAGAAG...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | CCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGCTTCTGCCATGTCCTTaGTCAGTGTCCCAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPVPPCVGQCCNRALPEVLLPCP*SVSQGC Trigger: ACAACCTTGGGACACTGACCAAGGACATGGCAGAAG...CACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CCA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGATCCATGCCTGTGCCTaGTCAGGATCCAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLPVCLGVMALTNPWIHACA*SGSRVT Trigger: TGTGACCCTGGATCCTGACCAGGCACAGGCATGGAT...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 72 bp | TACAGACCCGGGCAACCTGATCCTCCCGGGGGTTGTTaGTGTTTTGTTGTGGTTGTGGTGCACACTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRPGQPDPPGGC*CFVVVVVHTTE Trigger: CTCGGTAGTGTGCACCACAACCACAACAAAACACAAACAACCCCCGGGAGGATCAGGTTGCCCGGGTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR TCA 90 bp | ACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGTGGATTGTCTTGCTCTaGGAAGAGGGGCATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPPVPPCVGQCCNRALPEWIVLL*EEGHSS Trigger: GGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCA...CTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTACCACAAAGCCCACCCTaGAGAATAGGTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALPQSPP*RIGCWL Trigger: CAGCCAGCAACCTATTCTTCAGGGTGGGCTTTGTGG...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGGGAGATTCCCCAGATTaGAAAGTGCACGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLGDSPD*KVHGCA Trigger: AGCACAACCGTGCACTTTTCAATCTGGGGAATCTCC...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTGAGCGCTCCCAGAGGTaGCAGTACCTCAGCCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILERSQR*QYLSRA Trigger: CGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTC...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCTAGTACATCAGCTCTaGCCACGATGCCAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRLVHQL*PRCQPP Trigger: CGGTGGCTGGCATCGTGGGCAGAGCTGATGTACTAG...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGGGAAGCGCTGCTTTCTaGTCTCACGGTGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMGSAAF*SHGGGG Trigger: CCCACCCCCACCGTGAGAGCAGAAAGCAGCGCTTCC...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGAAGGCTGCCACACAGTaGAGGCTCAGTAAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIEKAATQ*RLSKAI Trigger: GATGGCCTTACTGAGCCTGCACTGTGTGGCAGCCTT...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCATTCCCATGGTGCTCCTaGTTGCTGTGGATTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPFPWCS*LLWIAD Trigger: GTCAGCAATCCACAGCAAGCAGGAGCACCATGGGAA...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTAGGCTGGGGGCTCCCTaGCTGCCCAGAGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKNFRNAMLGFRTGKASPRLGAP*LPRAVL Trigger: CAGCACAGCTCTGGGCAGCCAGGGAGCCCCCAGCCT...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTACGCCATCAGGGAGGTaGCCCCGCACCGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSTPSGR*PRTGSA Trigger: GGCTGAGCCGGTGCGGGGCCACCTCCCTGATGGCGT...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGCGGTTGTGCTGCGGGTaGAGCTGCAATGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLRLCCG*SCNAFW Trigger: CCAGAAGGCATTGCAGCTCCACCCGCAGCACAACCG...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR CCA 90 bp | ACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGACTCACACTGAGACATaGCTCCTTCTCCCTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPVPPCVGQCCNRALPETHTET*LLLPLQ Trigger: CTGCAAAGGGAGAAGGAGCCATGTCTCAGTGTGAGT...CTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTGCCCAGAGCTGTGCTaGCAGACCGCCCCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLCPELC*QTAPLL Trigger: GAGCAATGGGGCGGTCTGTCAGCACAGCTCTGGGCA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTTGGGGGTGGGCTTGCTaGGAGGAAGGCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFWGWAC*EEGWGL Trigger: GAGCCCCCAGCCTTCCTCTCAGCAAGCCCACCCCCA...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCTCTGGTGGCAATGGTaGATGGCAGCCTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMLWWQW*MAASPG Trigger: TCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTAGCAGAAGCCATACATTaGAGGCCAGGAGGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPPCVGQCCNRALPEVTVAEAIH*RPGGRN Trigger: ATTCCTACCTCCTGGCCTTCAATGTATGGCTTCTGC...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGGGAAATTTCTGTTGGTaGTCCCAGTCAGACACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRGNFCW*SQSDTS Trigger: TGAGGTGTCTGACTGGGAGCACCAACAGAAATTTCC...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGGGAAATTTCTGTTGGTaGTCCCAGTCAGACACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLQCLLVSASVVIERSQGNFCW*SQSDTS Trigger: TGAGGTGTCTGACTGGGAGCACCAACAGAAATTTCC...CTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | TGCGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGCTGTTCTCTCGTACATCTTAGCTTCTaGCATGTCCTTGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGPPSGHVCTTLQPCCSLVHLSF*HVLGQC Trigger: ACACTGACCAAGGACATGGCAGAAGCTAAGATGTAC...GAGAGAACAGCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGTTTCCTTCAGCAGCTTaGTGTCTGGAACCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLFPSAA*CLEPAS Trigger: TGAAGCTGGTTCCAGACAGCAAGCTGCTGAAGGAAA...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGGCCACCGCCTCAGTGTaGACTGGGTGCACCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLATASV*TGCTAK Trigger: CTTTGCGGTGCACCCAGTCCACACTGAGGCGGTGGC...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTACCAGGAGTCTTTGTGTaGGAAGCGCTGCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALPGVFV*EALLSA Trigger: AGCAGAAAGCAGCGCTTCCCACACAAAGACTCCTGG...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGACGGTTGTGCTGCGGGTaGAGCTGCAATGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRRLCCG*SCNAFW Trigger: CCAGAAGGCATTGCAGCTCCACCCGCAGCACAACCG...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCAGCAGCTTGCTGTCTaGAACCAGCTTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLVIIWAMLAQAQLSSALQQLAV*NQLQGS Trigger: AGAGCCCTGAAGCTGGTTCCAGACAGCAAGCTGCTG...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 72 bp | CTGATCCTCCCGGGGGTTGTTTGTGTTTTGTTGTGGTaGTGGTGCACACTACCGAGAATGATAGGAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LILPGVVCVLLW*WCTLPRMIGVG Trigger: CCCCACTCCTATCATTCTCGGTAGTGTGCACCACAACCACAACAAAACACAAACAACCCCCGGGAGGATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATGGATTGTCTTGCTCTaGGAAGAGGGGCATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALWIVLL*EEGHSS Trigger: GGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCA...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGCCACAAAGCCCACCCTaGAGAATAGGTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLPQSPP*RIGCWL Trigger: CAGCCAGCAACCTATTCTTCAGGGTGGGCTTTGTGG...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | TCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTGAGCGCTCCCAGAGGTaGCAGTACCTCAGCCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGMLCWGSEQVKQVLICFERSQR*QYLSRA Trigger: CGCACGGCTGAGGTACTGTCACCTCTGGGAGCGCTC...AAAACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGGGGGAAGCACTGCCCTaGACAGCCCTGATCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLGEALP*TALIQT Trigger: AGTCTGGATCAGGGCTGTGCAGGGCAGTGCTTCCCC...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAGCACAGAGTGATGGGTaGCAGCAGAAGCCATACATT | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALAQSDG*QQKPYI Trigger: AATGTATGGCTTCTGCTGGCACCCATCACTCTGTGC...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTCGTAGCAAAGGCAGCTaGCCCCAGCTAGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGMLCWGSEQVKQVLICFRSKGS*PQLAAP Trigger: CGGCGCTGCTAGCTGGGGCCAGCTGCCTTTGCTACG...AAAACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATGGTGGCAATGGTGAATaGCAGCCTCCCCAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFTSAYLLQKQHTEARHGGNGE*QPPQES Trigger: AGACTCCTGGGGAGGCTGCCATTCACCATTGCCACC...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACGGTTGTGCTGCGGGTaGAGCTGCAATGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKRLCCG*SCNAFW Trigger: CCAGAAGGCATTGCAGCTCCACCCGCAGCACAACCG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGAGCACTCCAGGCACCTaGGCTCCTCAGAGACTATAT | + |
|
Preference number: 4 (lower is better) Translates to: CLVIIWAMLAQAQLSSALSTPGT*APQRLY Trigger: ATATAGTCTCTGAGGAGCCCAGGTGCCTGGAGTGCT...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCCAGGCGATCCAGCTTaGCCAGATTTTCCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLVIIWAMLAQAQLSSALPGDPA*PDFPSA Trigger: TGCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGG...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGGCAGAAGCCATACATTaGAGGCCAGGAGGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLVIIWAMLAQAQLSSALAEAIH*RPGGRN Trigger: ATTCCTACCTCCTGGCCTTCAATGTATGGCTTCTGC...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAAAGTCGTAGCACAGAGTaGTGGGTGCCAGCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKSRSTE*WVPAEA Trigger: GGCTTCTGCTGGCACCCATCACTCTGTGCTACGACT...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTGTGCTCCAGCCTCTTaGAGGCTGCCACACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLCAPAS*RLPHSA Trigger: TGCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCCACAAAGCCCACCCTaGAGAATAGGTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMPQSPP*RIGCWL Trigger: CAGCCAGCAACCTATTCTTCAGGGTGGGCTTTGTGG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGTTGTGGGGTAGAGTCTaGACTCCAGACCTGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIELWGRV*TPDLNK Trigger: CTTATTCAGGTCTGGAGTTCAGACTCTACCCCACAA...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGGGAGATTCCCCAGATTaGAAAGTGCACGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRGDSPD*KVHGCA Trigger: AGCACAACCGTGCACTTTTCAATCTGGGGAATCTCC...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTTTCACCACAGCCACATaGTGGCTTGGGCTGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILFTTAT*WLGLSW Trigger: CCAGCTCAGCCCAAGCCATCATGTGGCTGTGGTGAA...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACTGGGAAGGCTGGAGTaGGACAGCTTCCCTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKLGRLE*DSFPVH Trigger: GTGTACAGGGAAGCTGTCTCACTCCAGCCTTCCCAG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGCTCCCCTGAGAATAGTTCAGATATaGCTTTTGGGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLGDASPSPAIKCSAPLRIVQI*LLGPWA Trigger: AGCCCAAGGACCCAAAAGTCATATCTGAACTATTCT...CAGGGGAGCAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGGGGAAGCACTGCCCTaGACAGCCCTGATCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KKNFRNAMLGFRTGKASPGEALP*TALIQT Trigger: AGTCTGGATCAGGGCTGTGCAGGGCAGTGCTTCCCC...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCCCAAGGTTGTTCAGTaGACTTGCGTGGCGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMPKVVQ*TCVAWV Trigger: TACCCACGCCACGCAAGTGCACTGAACAACCTTGGG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAACCACTCTTCAGCCTTaGTGTTCTCTCCCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRTTLQP*CSLPGT Trigger: GGTCCCTGGGAGAGAACAGCAAGGCTGAAGAGTGGT...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTACAGTACCTCAGCCGTaGGGGCCACCTTCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGMLCWGSEQVKQVLICFTVPQP*GPPSGH Trigger: GTGCCCTGAAGGTGGCCCGCACGGCTGAGGTACTGT...AAAACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACCTGTACACCTCCAGTaGCTCCTTGTGTCGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKPVHLQ*LLVSAS Trigger: ACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACTCTATGGCCTCGAGTaGCTTCCCATGGTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKLYGLE*LPMVLL Trigger: CAGGAGCACCATGGGAAGGCACTCGAGGCCATAGAG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGACCTGGATGTGCCGGATaGCACCCATGTTCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRPGCAG*HPCSSM Trigger: CATGGATGAACATGGGTGGCATCCGGCACATCCAGG...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGGGCTCCTTCTCCCTTTaGAGGAGTTTTAGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLGSFSL*RSFRIP Trigger: GGGGATCCTAAAACTCCTGCAAAGGGAGAAGGAGCC...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGGGTGGCAATGGTGAATaGCAGCCTCCCCAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLGGNGE*QPPQES Trigger: AGACTCCTGGGGAGGCTGCCATTCACCATTGCCACC...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTATCCTTGTTCCGACCTTaGTCTTTTAGGAAATTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPPCVGQCCNRALPEVTVSLFRP*SFRKLA Trigger: CGCCAATTTCCTAAAAGACCAAGGTCGGAACAAGGA...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTAGTCGTAGCACAGAGTaGTGGGTGCCAGCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPSRSTE*WVPAEA Trigger: GGCTTCTGCTGGCACCCATCACTCTGTGCTACGACT...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGGGTTGCTGGCTGGAATaGACGGGAACACGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLGCWLE*TGTRGT Trigger: TGTTCCTCGTGTTCCCGTTCATTCCAGCCAGCAACC...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGGGAGATTCCCCAGATTaGAAAGTGCACGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLGDSPD*KVHGCA Trigger: AGCACAACCGTGCACTTTTCAATCTGGGGAATCTCC...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | CCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTAATTCCTTCAGCAGCATaGTGGCTTCTTCTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPEPHKQTRAPRPQRALIPSAA*WLLLSS Trigger: AGAAGACAGAAGAAGCCATCATGCTGCTGAAGGAAT...TAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCATGATGGCTTGGGCTaGGCTGGATGGCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSHDGLG*AGWPAG Trigger: ACCAGCAGGCCATCCAGCTCAGCCCAAGCCATCATG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTCTGGGAAGGCTGGAGTaGGACAGCTTCCCTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPLGRLE*DSFPVH Trigger: GTGTACAGGGAAGCTGTCTCACTCCAGCCTTCCCAG...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAACCCAAGGTTGTTCAGTaGACTTGCGTGGCGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKPKVVQ*TCVAWV Trigger: TACCCACGCCACGCAAGTGCACTGAACAACCTTGGG...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGAGTGCCTTCCCATGGTaGTCCTGCTTGCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMSAFPW*SCLLWI Trigger: AATCCACAGCAAGCAGGAGCACCATGGGAAGGCACT...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAAGTTCATCCATGCCTGTaGCTGGTCAGGATCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKVHPCL*LVRIQG Trigger: ACCCTGGATCCTGACCAGGCACAGGCATGGATGAAC...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTAGGCGGAGCTCCCTCTaGGAAGGCTGGAGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSRRSSL*EGWSET Trigger: TGTCTCACTCCAGCCTTCCCAGAGGGAGCTCCGCCT...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATAGCACTCCAGGCACCTaGGCTCCTCAGAGACTATAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFTSAYLLQKQHTEARHSTPGT*APQRLY Trigger: ATATAGTCTCTGAGGAGCCCAGGTGCCTGGAGTGCT...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| 3UTR CAA 72 bp | TGGCTCAGCATCAGGACCTGCATGGCCTGTGGTGTTTaGTTTTCAGTGATAAGCCCTTCCAAATCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSIRTCMACGV*FSVISPSKSFP Trigger: AGGGAAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTCCTGATGCTGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | CGGACAGTTCTTTATTCCAGCCTGGTAAATGTCCTCAGCTTCCTTAAATCTTTCAGTCGTAGCACAGAGTaGTGGGTGCCAGCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTVLYSSLVNVLSFLKSFSRSTE*WVPAEA Trigger: GGCTTCTGCTGGCACCCATCACTCTGTGCTACGACT...GAAAGATTTAAGGAAGCTGAGGACATTTACCAGGCTGGAATAAAGAACTGTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTCACCAGGAGAGGACTGCCTGGCTGGCAGAGCCTGCTGTGTATAAGCAGTAGAAAGGGTTCATaGCAGTCAGAAATATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HCVTRRGLPGWQSLLCISSRKGS*QSEICL Trigger: TAAACATATTTCTGACTGGCATGAACCCTTTCTACT...GCTTATACACAGCAGGCTCTGCCAGCCAGGCAGTCCTCTCCTGGTGACACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTACCACTCTTCAGCCTTaGTGTTCTCTCCCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPTTLQP*CSLPGT Trigger: GGTCCCTGGGAGAGAACAGCAAGGCTGAAGAGTGGT...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTCCTGTACACCTCCAGTaGCTCCTTGTGTCGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGMLCWGSEQVKQVLICFPVHLQ*LLVSAS Trigger: ACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGG...AAAACAAATCAGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTTTCCCATGGTGCTCCTaGTTGCTGTGGATTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILFPWCS*LLWIAD Trigger: GTCAGCAATCCACAGCAAGCAGGAGCACCATGGGAA...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGAGTGCCTTCCCATGGTaGTCCTGCTTGCTGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLSAFPW*SCLLWI Trigger: AATCCACAGCAAGCAGGAGCACCATGGGAAGGCACT...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTGGACAGCACGCACAGTaGCCGATAGGACTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSGQHAQ*PIGLVA Trigger: AGCCACAAGTCCTATCGGCCACTGTGCGTGCTGTCC...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGAGTTGTAATGAACCTTaGCATTGTGGGGTAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIESCNEP*HCGVES Trigger: AGACTCTACCCCACAATGCCAAGGTTCATTACAACT...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGGGCATCAGCAAAATCTaGACCATATTTAATGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRGISKI*TIFNGF Trigger: GAATCCATTAAATATGGTCCAGATTTTGCTGATGCC...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCATCCTCAGAGACTATATaGCTGGTTATCTTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPSSETI*LVIFSA Trigger: AGCTGAAAAGATAACCAGCCATATAGTCTCTGAGGA...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTCAGCAGCTTGCTGTCTaGAACCAGCTTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPQQLAV*NQLQGS Trigger: AGAGCCCTGAAGCTGGTTCCAGACAGCAAGCTGCTG...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAATTCAGTGCACTTGCGTaGCGTGGGTACAGCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKFSALA*RGYSLN Trigger: ATTCAGGCTGTACCCACGCCACGCAAGTGCACTGAA...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCCTGTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGTCTTCTGTCTTCTCCTaGGACATGATTTCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFPVHLQCLLVSASVVIESSVFS*DMISST Trigger: AGTGGATGAAATCATGTCCCAGGAGAAGACAGAAGA...CTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTACAGGGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGCCAGTCCGCGATTCTTaGAGACTGTTTTATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMPVRDS*RLFYHR Trigger: CCTGTGATAAAACAGTCTTCAAGAATCGCGGACTGG...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTGGATTGTCTTGCTCTaGGAAGAGGGGCATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLWIVLL*EEGHSS Trigger: GGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGAGTAGAAAGGGTTCATaGCAGTCAGAAATATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RNSTQRHGILMLGCKQQRSRKGS*QSEICL Trigger: TAAACATATTTCTGACTGGCATGAACCCTTTCTACT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTAAGGCTGCCACACAGTaGAGGCTCAGTAAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFKAATQ*RLSKAI Trigger: GATGGCCTTACTGAGCCTGCACTGTGTGGCAGCCTT...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTCATGGTGCTCCTGCTTaGTGTGGATTGCTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPHGAPA*CGLLTG Trigger: TCCTGTCAGCAATCCACAGCAAGCAGGAGCACCATG...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTCATGGTGCTCCTGCTTaGTGTGGATTGCTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKNFRNAMLGFRTGKASPHGAPA*CGLLTG Trigger: TCCTGTCAGCAATCCACAGCAAGCAGGAGCACCATG...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTCTTCTGTCTTCTCCTaGGACTTGAGGAGATTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLSSVFS*DLRRFP Trigger: GGGGAATCTCCTCAAGTCCCAGGAGAAGACAGAAGA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTTTGTGGGGTAGAGTCTaGACTCCAGACCTGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILLWGRV*TPDLNK Trigger: CTTATTCAGGTCTGGAGTTCAGACTCTACCCCACAA...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060095.15 |
||
| CDS-3UTR TCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAATTCCTTCAGCAGCATaGTGGCTTCTTCTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRIPSAA*WLLLSS Trigger: AGAAGACAGAAGAAGCCATCATGCTGCTGAAGGAAT...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGAGGTGACAGTAAGTAGAAAGGGTTCATaGCAGTCAGAAATATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCVGQCCNRALPEVTVSRKGS*QSEICL Trigger: TAAACATATTTCTGACTGGCATGAACCCTTTCTACT...TACTGTCACCTCTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGGGAAATTTCTGTTGGTaGTCCCAGTCAGACACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLGNFCW*SQSDTS Trigger: TGAGGTGTCTGACTGGGAGCACCAACAGAAATTTCC...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATAGCCAGATTTCATTCTaGTTCACAGTCTTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFTSAYLLQKQHTEARHSQISF*FTVFQE Trigger: CTCCTGGAAGACTGTGAAGCAGAATGAAATCTGGCT...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAGTACATCTTAGCTTCTaGCATGTCCTTGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRVHLSF*HVLGQC Trigger: ACACTGACCAAGGACATGGCAGAAGCTAAGATGTAC...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGGTACATCTTAGCTTCTaGCATGTCCTTGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMVHLSF*HVLGQC Trigger: ACACTGACCAAGGACATGGCAGAAGCTAAGATGTAC...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAATTTCCTTCAGCAGCTTaGTGTCTGGAACCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKFPSAA*CLEPAS Trigger: TGAAGCTGGTTCCAGACAGCAAGCTGCTGAAGGAAA...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | TTTAATGGCATCCCCTTGGTAAAAGTCACAAACCTCCTTAAAGTGCTCAGCCCTTCTTCTGTCTTCTCCTaGGACTTGAGGAGATTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNGIPLVKVTNLLKVLSPSSVFS*DLRRFP Trigger: GGGGAATCTCCTCAAGTCCCAGGAGAAGACAGAAGA...AGGGCTGAGCACTTTAAGGAGGTTTGTGACTTTTACCAAGGGGATGCCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTGCAGAAGCCATACATTaGAGGCCAGGAGGTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFAEAIH*RPGGRN Trigger: ATTCCTACCTCCTGGCCTTCAATGTATGGCTTCTGC...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGAGAATAGTTCAGATATaGCTTTTGGGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMRIVQI*LLGPWA Trigger: AGCCCAAGGACCCAAAAGTCATATCTGAACTATTCT...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTGCACAGAGTGATGGGTaGCAGCAGAAGCCATACATT | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSAQSDG*QQKPYI Trigger: AATGTATGGCTTCTGCTGGCACCCATCACTCTGTGC...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTAGCCAGATTTCATTCTaGTTCACAGTCTTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILSQISF*FTVFQE Trigger: CTCCTGGAAGACTGTGAAGCAGAATGAAATCTGGCT...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAATCCTTGTTCCGACCTTaGTCTTTTAGGAAATTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKSLFRP*SFRKLA Trigger: CGCCAATTTCCTAAAAGACCAAGGTCGGAACAAGGA...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060095.15 |
||
| CDS-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTCTGCCATGTCCTTaGTCAGTGTCCCAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSLLPCP*SVSQGC Trigger: ACAACCTTGGGACACTGACCAAGGACATGGCAGAAG...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGAAGGCGGAGCTCCCTCTaGGAAGGCTGGAGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRRRSSL*EGWSET Trigger: TGTCTCACTCCAGCCTTCCCAGAGGGAGCTCCGCCT...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATTTCAGATATGACTTTTaGGTCCTTGGGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPFTSAYLLQKQHTEARHFRYDF*VLGLQL Trigger: CAACTGAAGCCCAAGGACCCAAAAGTCATATCTGAA...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR TCA 90 bp | CGGACAGTTCTTTATTCCAGCCTGGTAAATGTCCTCAGCTTCCTTAAATCTTTCCCAGTCCGCGATTCTTaGAGACTGTTTTATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTVLYSSLVNVLSFLKSFPVRDS*RLFYHR Trigger: CCTGTGATAAAACAGTCTTCAAGAATCGCGGACTGG...GAAAGATTTAAGGAAGCTGAGGACATTTACCAGGCTGGAATAAAGAACTGTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR GCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGACTAGTACATCAGCTCTaGCCACGATGCCAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRLVHQL*PRCQPP Trigger: CGGTGGCTGGCATCGTGGGCAGAGCTGATGTACTAG...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | TTACCTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTGAAGGAAATTTCTGTTaGTGCTCCCAGTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPTFTTSDQDYTHCEVLSEGNFC*CSQSDT Trigger: GGTGTCTGACTGGGAGCACCAACAGAAATTTCCTTC...AGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTGAAGGAAATTTCTGTTaGTGCTCCCAGTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFEGNFC*CSQSDT Trigger: GGTGTCTGACTGGGAGCACCAACAGAAATTTCCTTC...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTAGTTGTAATGAACCTTaGCATTGTGGGGTAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILSCNEP*HCGVES Trigger: AGACTCTACCCCACAATGCCAAGGTTCATTACAACT...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060095.15 |
||
| CDS-3UTR CCA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTTCTTTTCAGCTTCTTTaGTCTGACCCATCACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DLHGLWCFVFSDKPFQILSFQLL*SDPSLL Trigger: TAGCAGTGATGGGTCAGACCAAAGAAGCTGAAAAGA...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGATCGAGTGCCTTCCCATaGTGCTCCTGCTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRSSAFP*CSCLLW Trigger: CCACAGCAAGCAGGAGCACCATGGGAAGGCACTCGA...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR GCA 90 bp | CGGACAGTTCTTTATTCCAGCCTGGTAAATGTCCTCAGCTTCCTTAAATCTTTCAGCCAGATTTCATTCTaGTTCACAGTCTTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTVLYSSLVNVLSFLKSFSQISF*FTVFQE Trigger: CTCCTGGAAGACTGTGAAGCAGAATGAAATCTGGCT...GAAAGATTTAAGGAAGCTGAGGACATTTACCAGGCTGGAATAAAGAACTGTCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATGGCATCAGCAAAATCTaGACCATATTTAATGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QPFTSAYLLQKQHTEARHGISKI*TIFNGF Trigger: GAATCCATTAAATATGGTCCAGATTTTGCTGATGCC...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTCCTCAGAGACTATATaGCTGGTTATCTTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLSSETI*LVIFSA Trigger: AGCTGAAAAGATAACCAGCCATATAGTCTCTGAGGA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTTTCAGATATGACTTTTaGGTCCTTGGGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKNFRNAMLGFRTGKASPFRYDF*VLGLQL Trigger: CAACTGAAGCCCAAGGACCCAAAAGTCATATCTGAA...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGACCAGGCGATCCAGCTTaGCCAGATTTTCCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRPGDPA*PDFPSA Trigger: TGCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGG...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR TCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGACCAGTCCGCGATTCTTaGAGACTGTTTTATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRPVRDS*RLFYHR Trigger: CCTGTGATAAAACAGTCTTCAAGAATCGCGGACTGG...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CAA 72 bp | GGTTCAGAACAGGTAAAGCAAGTCCTGATTTGTTTTTaGTCTCCTTCCTACCTAAGGCATACTTCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GSEQVKQVLICF*SPSYLRHTSEF Trigger: GAATTCTGAAGTATGCCTTAGGTAGGAAGGAGACAAAAAACAAATCAGGACTTGCTTTACCTGTTCTGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CCA 90 bp | ATAATGCAGGTGTACATTTATATACAATCACCCAAAATAGGAACACTGAGCAGATCTTTTCAGCTTCTTTaGTCTGACCCATCACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IMQVYIYIQSPKIGTLSRSFQLL*SDPSLL Trigger: TAGCAGTGATGGGTCAGACCAAAGAAGCTGAAAAGA...TCTGCTCAGTGTTCCTATTTTGGGTGATTGTATATAAATGTACACCTGCATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CAA 72 bp | TTACCTGTAAAAGGATGCCATTTAGATACTTGGGCTTaGCAGTATTTGGGAAATGACAACCTACAATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPVKGCHLDTWA*QYLGNDNLQWK Trigger: TTTCCATTGTAGGTTGTCATTTCCCAAATACTGCAAAGCCCAAGTATCTAAATGGCATCCTTTTACAGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| 3UTR CAA 72 bp | AAGCTTTCCTATCTTGCAATTTTCATATGCTTGGTTTaGAGAGCTGCTATCAAAATGACTATGTACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLSYLAIFICLV*RAAIKMTMYRG Trigger: TCCTCTGTACATAGTCATTTTGATAGCAGCTCTCAAAACCAAGCATATGAAAATTGCAAGATAGGAAAGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CCA 90 bp | CCCATCACTGCTAAAACCTGTGCCAGAGCCAGGCGGAGCTCCCTCTaGGAAGGCTGGAGTGAGACAGCTTCCCTGTACACCTCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PITAKTCARARRSSL*EGWSETASLYTSSA Trigger: GGCACTGGAGGTGTACAGGGAAGCTGTCTCACTCCAGCCTTCCCAGAGGGAGCTCCGCCTGGCTCTGGCACAGGTTTTAGCAGTGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS TCA 90 bp | CGGCGACATGGGGAATCCACTGCTCTTGGGCTCTGGTGGCAATGGTaGATGGCAGCCTCCCCAGGAGTCTTTGTGTGGGAAGCGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRHGESTALGLWWQW*MAASPGVFVWEALL Trigger: AAGCAGCGCTTCCCACACAAAGACTCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAGCCCAAGAGCAGTGGATTCCCCATGTCGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | GTACACCTCCAGTGCCTCCTTGTGTCGGCCAGTGTTGTAATAGAGCGCTCCCAGTTGAAAAGTGCACGGTaGTGCTGCGGGTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLQCLLVSASVVIERSQLKSAR*CCGWSC Trigger: GCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAA...CTGGGAGCGCTCTATTACAACACTGGCCGACACAAGGAGGCACTGGAGGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | TGCGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGCTGTTCTCTCCCCAATCCCTCTTCCTaGAGGAGATTCCCCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: CGPPSGHVCTTLQPCCSLPNPSS*RRFPRL Trigger: CAATCTGGGGAATCTCCTCAAGGAAGAGGGATTGGG...GAGAGAACAGCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS GCA 90 bp | CTTAGCTTCTGCCATGTCCTTGGTCAGTGTCCCAAGGTTGTTCAGTaGACTTGCGTGGCGTGGGTACAGCTTGAGGGCGGTTCTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFCHVLGQCPKVVQ*TCVAWVQLEGGSVV Trigger: CACTACAGAACCGCCCTCAAGCTGTACCCACGCCACGCAAGTGCACTGAACAACCTTGGGACACTGACCAAGGACATGGCAGAAGCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGACCCTGAAGAATAGGTaGCTGGCTGGAATGAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNSTQRHGILMLGCKQQRTLKNR*LAGMNG Trigger: CCCGTTCATTCCAGCCAGCAACCTATTCTTCAGGGT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | CCACTCAGCCACCTCCCAGTCTGTCTAGGAGTAATGGCGTTAACCAACCCATGGTCCAGGCGATCCAGCTaGGCCAGATTTTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLPVCLGVMALTNPWSRRSS*ARFSFS Trigger: GCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGGA...CCATGGGTTGGTTAACGCCATTACTCCTAGACAGACTGGGAGGTGGCTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 90 bp | CTTGCTGTCTGGAACCAGCTTCAGGGCTCTCTCATAATAGGCCCTTaGAGACACATAGCTTCCCTGGATGTGCCGGATGCCACCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVWNQLQGSLIIGP*RHIASLDVPDATHV Trigger: AACATGGGTGGCATCCGGCACATCCAGGGAAGCTATGTGTCTGCAAGGGCCTATTATGAGAGAGCCCTGAAGCTGGTTCCAGACAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CCA 90 bp | GCCATGTCCTTGGTCAGTGTCCCAAGGTTGTTCAGTGCACTTGCGTaGCGTGGGTACAGCCTGAATAAGGACTCTCTCGACAGCCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: AMSLVSVPRLFSALA*RGYSLNKDSLDSQI Trigger: AATCTGGCTGTCGAGAGAGTCCTTATTCAGGCTGTACCCACGCCACGCAAGTGCACTGAACAACCTTGGGACACTGACCAAGGACATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | TGCGGGCCACCTTCAGGGCACGTCTGTACCACTCTTCAGCCTTGCTGTTCTCTCAGAAGGAAATTTCTGTaGGTGCTCCCAGTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: CGPPSGHVCTTLQPCCSLRRKFL*VLPVRH Trigger: GTGTCTGACTGGGAGCACCAACAGAAATTTCCTTCT...GAGAGAACAGCAAGGCTGAAGAGTGGTACAGACGTGCCCTGAAGGTGGCCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGAGGAGATTCCCCAGATaGAAAAGTGCACGGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RNSTQRHGILMLGCKQQRRRFPR*KSARLC Trigger: GCACAACCGTGCACTTTTCAATCTGGGGAATCTCCT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 90 bp | CTGCGGGTGGAGCTGCAATGCCTTCTGGTAGTACATCTTAGCTTCTaGCATGTCCTTGGTCAGTGTCCCAAGGTTGTTCAGTGCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRVELQCLLVVHLSF*HVLGQCPKVVQCTC Trigger: GCAAGTGCACTGAACAACCTTGGGACACTGACCAAGGACATGGCAGAAGCTAAGATGTACTACCAGAAGGCATTGCAGCTCCACCCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS GCA 90 bp | CCCCAGATTGAAAAGTGCACGGTTGTGCTGCGGGTGGAGCTGCAATaGCTTCTGGTAGTACATCTTAGCTTCTGCCATGTCCTTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQIEKCTVVLRVELQ*LLVVHLSFCHVLGQ Trigger: CTGACCAAGGACATGGCAGAAGCTAAGATGTACTACCAGAAGGCATTGCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAATCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | AGAAACAGCACACAGAGGCACGGCATCCTGATGCTGGGCTGTAAGCAGCAGAGGAGAAGGAAATTTCTGTaGGTGCTCCCAGTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RNSTQRHGILMLGCKQQRRRKFL*VLPVRH Trigger: GTGTCTGACTGGGAGCACCAACAGAAATTTCCTTCT...CCTCTGCTGCTTACAGCCCAGCATCAGGATGCCGTGCCTCTGTGTGCTGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGTTGTGCTCCAGCCTCTaGAAGGCTGCCACACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLLCSSL*KAATQC Trigger: GCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAA...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCAGCCAGTCCGCGATTCTaGAAGACTGTTTTATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPASPRF*KTVLSQ Trigger: CTGTGATAAAACAGTCTTCAAGAATCGCGGACTGGC...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGTTGTGCTCCAGCCTCTaGAAGGCTGCCACACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMLCSSL*KAATQC Trigger: GCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAA...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CAA 90 bp | GGCATACATGAAGTTCCAACACCAGAACCACACAAACAAACAAGGGCCCCCAGGGTCTTCTCCTGGGACTaGAGGAGATTCCCCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: GIHEVPTPEPHKQTRAPRVFSWD*RRFPRL Trigger: CAATCTGGGGAATCTCCTCAAGTCCCAGGAGAAGAC...CCTGGGGGCCCTTGTTTGTTTGTGTGGTTCTGGTGTTGGAACTTCATGTATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 90 bp | CACTCGATTCGGAGACTCACACTGAGACATGGCTCCTTCTCCCTTTaGAGGAGTTTTAGGATCCCCAATCCCTCTTCCTTGAGGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HSIRRLTLRHGSFSL*RSFRIPNPSSLRRF Trigger: GAATCTCCTCAAGGAAGAGGGATTGGGGATCCTAAAACTCCTGCAAAGGGAGAAGGAGCCATGTCTCAGTGTGAGTCTCCGAATCGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
||
| CDS CCA 90 bp | TGGGCTCCTCAGAGACTATATGGCTGGTTATCTTTTCAGCTTCTTTaGTCTGACCCATCACTGCTAAAACCTGTGCCAGAGCCAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WAPQRLYGWLSFQLL*SDPSLLKPVPEPGG Trigger: TCCGCCTGGCTCTGGCACAGGTTTTAGCAGTGATGGGTCAGACCAAAGAAGCTGAAAAGATAACCAGCCATATAGTCTCTGAGGAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS CCA 90 bp | GGCGGTAGCACTCCAGGCACCTGGGCTCCTCAGAGACTATATGGCTaGTTATCTTTTCAGCTTCTTTGGTCTGACCCATCACTGCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGSTPGTWAPQRLYG*LSFQLLWSDPSLLK Trigger: TTTTAGCAGTGATGGGTCAGACCAAAGAAGCTGAAAAGATAACCAGCCATATAGTCTCTGAGGAGCCCAGGTGCCTGGAGTGCTACCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTTGTGCTCCAGCCTCTaGAAGGCTGCCACACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLLCSSL*KAATQC Trigger: GCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATAAATTTAGCTGTGGACAGAGCTCAGAGGGAGTGCACAAGGTCCTGTTGAAAAGTGCACGGTaGTGCTGCGGGTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MKNKFSCGQSSEGVHKVLLKSAR*CCGWSC Trigger: GCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAA...CAGGACCTTGTGCACTCCCTCTGAGCTCTGTCCACAGCTAAATTTATTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAACAAGGGCCCCCAGGCCTCAAAGAGCACTATTCCCCACGGTCTCCAGTAGGGAAGCCAAGCTaGAATAGGCATCAGCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TNKQGPPGLKEHYSPRSPVGKPS*NRHQQN Trigger: ATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTAC...TGGAGACCGTGGGGAATAGTGCTCTTTGAGGCCTGGGGGCCCTTGTTTGTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCTGGGTGGACCCACCACAGACAGAAAAGAAAGGCATTTTTGCTTATGTCCAGGCGATCCAGCTaGGCCAGATTTTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPGWTHHRQKRKAFLLMSRRSS*ARFSFS Trigger: GCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGGA...CATAAGCAAAAATGCCTTTCTTTTCTGTCTGTGGTGGGTCCACCCAGGAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
||
| CDS TCA 90 bp | TTCTCCTGGGACATGATTTCATCCACTCGATTCGGAGACTCACACTaGGACATGGCTCCTTCTCCCTTTGCAGGAGTTTTAGGATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSWDMISSTRFGDSH*DMAPSPFAGVLGSP Trigger: TGGGGATCCTAAAACTCCTGCAAAGGGAGAAGGAGCCATGTCTCAGTGTGAGTCTCCGAATCGAGTGGATGAAATCATGTCCCAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS GCA 90 bp | AGGAACCTTGTAAGGATGTATGGCGAGAATGAAGCTGGATTGTCTTaGTCTGAGAAGAGGGGCATAGTTCCTCCCATTATCCACAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RNLVRMYGENEAGLS*SEKRGIVPPIIHRR Trigger: CCGCCTGTGGATAATGGGAGGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCAGCTTCATTCTCGCCATACATCCTTACAAGGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | GCACGTAGCAAGGTGGTGCCTCTCCATCTGACACCCAAGCATTTTCTAAATAGAACCCTGAAGAATAGGTaGCTGGCTGGAATGAACGGG | + |
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Preference number: 5 (lower is better) Translates to: ARSKVVPLHLTPKHFLNRTLKNR*LAGMNG Trigger: CCCGTTCATTCCAGCCAGCAACCTATTCTTCAGGGT...TCTATTTAGAAAATGCTTGGGTGTCAGATGGAGAGGCACCACCTTGCTACGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | TTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGAATAGGCATCAGCAAAATCTGAGGAGATTCCCCAGATaGAAAAGTGCACGGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: FPAPPVGKPSLNRHQQNLRRFPR*KSARLC Trigger: GCACAACCGTGCACTTTTCAATCTGGGGAATCTCCT...CAGATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTACTGGCGGAGCAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | TGCTTAGTGATAATCTGGGCGATGCTAGCCCAAGCCCAGCTATCAAGTGCTCTGTCTCATAATAGGCCCTaGCAGACACATAGCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: CLVIIWAMLAQAQLSSALSHNRP*QTHSFP Trigger: AGGGAAGCTATGTGTCTGCAAGGGCCTATTATGAGA...CAGAGCACTTGATAGCTGGGCTTGGGCTAGCATCGCCCAGATTATCACTAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | ATGTCCTCAGCTTCCTTAAATCTTTCCTGCTCCGCCAGTAGGGAAGCCAAGCTTGCCAGTCCGCGATTCTaGAAGACTGTTTTATCACAG | + |
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Preference number: 5 (lower is better) Translates to: MSSASLNLSCSASREAKLASPRF*KTVLSQ Trigger: CTGTGATAAAACAGTCTTCAAGAATCGCGGACTGGC...AAGCTTGGCTTCCCTACTGGCGGAGCAGGAAAGATTTAAGGAAGCTGAGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | CTACATTTACAACATCAGACCAGGACTACACACATTGTGAGGTGCTGTCTCTTTTTGAAAAGTGCACGGTaGTGCTGCGGGTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LHLQHQTRTTHIVRCCLFLKSAR*CCGWSC Trigger: GCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAA...AAAGAGACAGCACCTCACAATGTGTGTAGTCCTGGTCTGATGTTGTAAATGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATAGGAGATTCCCCAGATaGAAAAGTGCACGGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: QPFTSAYLLQKQHTEARHRRFPR*KSARLC Trigger: GCACAACCGTGCACTTTTCAATCTGGGGAATCTCCT...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | GACCTGCATGGCCTGTGGTGTTTTGTTTTCAGTGATAAGCCCTTCCAAATCCTTGTCTTCTCCTGGGACTaGAGGAGATTCCCCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: DLHGLWCFVFSDKPFQILVFSWD*RRFPRL Trigger: CAATCTGGGGAATCTCCTCAAGTCCCAGGAGAAGAC...AAGGATTTGGAAGGGCTTATCACTGAAAACAAAACACCACAGGCCATGCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CCA 90 bp | TTAATGGATTCCTTCAGCAGCATGATGGCTTCTTCTGTCTTCTCCTaGGACTTGAGGAGATTCCCCAGATTGAAAAGTGCACGGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LMDSFSSMMASSVFS*DLRRFPRLKSARLC Trigger: GCACAACCGTGCACTTTTCAATCTGGGGAATCTCCTCAAGTCCCAGGAGAAGACAGAAGAAGCCATCATGCTGCTGAAGGAATCCATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | CGGACAGTTCTTTATTCCAGCCTGGTAAATGTCCTCAGCTTCCTTAAATCTTTCACCCTGAAGAATAGGTaGCTGGCTGGAATGAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTVLYSSLVNVLSFLKSFTLKNR*LAGMNG Trigger: CCCGTTCATTCCAGCCAGCAACCTATTCTTCAGGGT...GAAAGATTTAAGGAAGCTGAGGACATTTACCAGGCTGGAATAAAGAACTGTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS-3UTR CAA 90 bp | CAGCCATTTACTTCAGCTTATCTGCTTCAGAAACAGCACACAGAGGCACGGCATGTAGGGAAGCCAAGCTaGAATAGGCATCAGCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPFTSAYLLQKQHTEARHVGKPS*NRHQQN Trigger: ATTTTGCTGATGCCTATTCAAGCTTGGCTTCCCTAC...ATGCCGTGCCTCTGTGTGCTGTTTCTGAAGCAGATAAGCTGAAGTAAATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | GAGGCCCAGATAAAGCAGTCTCCTAGATGTCATGTGGCTTTTTCTCCTCTGAAATCTCATAATAGGCCCTaGCAGACACATAGCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EAQIKQSPRCHVAFSPLKSHNRP*QTHSFP Trigger: AGGGAAGCTATGTGTCTGCAAGGGCCTATTATGAGA...TTTCAGAGGAGAAAAAGCCACATGACATCTAGGAGACTGCTTTATCTGGGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS-3UTR CAA 90 bp | AAGAAGAACTTCAGGAATGCTATGCTGGGGTTCAGAACAGGTAAAGCAAGTCCTAGAAGGAAATTTCTGTaGGTGCTCCCAGTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KKNFRNAMLGFRTGKASPRRKFL*VLPVRH Trigger: GTGTCTGACTGGGAGCACCAACAGAAATTTCCTTCT...AGGACTTGCTTTACCTGTTCTGAACCCCAGCATAGCATTCCTGAAGTTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CAA 90 bp | CTATGGCCTCGAGTGCCTTCCCATGGTGCTCCTGCTTGCTGTGGATaGCTGACAGGAGGCGGTAGCACTCCAGGCACCTGGGCTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LWPRVPSHGAPACCG*LTGGGSTPGTWAPQ Trigger: CTGAGGAGCCCAGGTGCCTGGAGTGCTACCGCCTCCTGTCAGCAATCCACAGCAAGCAGGAGCACCATGGGAAGGCACTCGAGGCCATAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 72 bp | ACAGGAGGCATGCTAGTACATCAGCTCTGCCCACGATaGCAGCCACCGCCTCAGTGTGGACTGGGTGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: TGGMLVHQLCPR*QPPPQCGLGAP Trigger: CGGTGCACCCAGTCCACACTGAGGCGGTGGCTGGCATCGTGGGCAGAGCTGATGTACTAGCATGCCTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 ENSMUST00000203991.2 |
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| CDS CAA 72 bp | CGAGTGCCTTCCCATGGTGCTCCTGCTTGCTGTGGATaGCTGACAGGAGGCGGTAGCACTCCAGGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPSHGAPACCG*LTGGGSTPGTW Trigger: CCAGGTGCCTGGAGTGCTACCGCCTCCTGTCAGCAATCCACAGCAAGCAGGAGCACCATGGGAAGGCACTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CAA 90 bp | TTGGGCTCTGGTGGCAATGGTGAATGGCAGCCTCCCCAGGAGTCTTaGTGTGGGAAGCGCTGCTTTCTGCTCTCACGGTGGGGGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSGGNGEWQPPQES*CGKRCFLLSRWGWA Trigger: AGCCCACCCCCACCGTGAGAGCAGAAAGCAGCGCTTCCCACACAAAGACTCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAGCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 ENSMUST00000203991.2 |
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| CDS GCA 72 bp | CTCCCCAGGAGTCTTTGTGTGGGAAGCGCTGCTTTCTaGTCTCACGGTGGGGGTGGGCTTGCTGAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPRSLCVGSAAF*SHGGGGLAERK Trigger: CTTCCTCTCAGCAAGCCCACCCCCACCGTGAGAGCAGAAAGCAGCGCTTCCCACACAAAGACTCCTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 ENSMUST00000203991.2 |
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| CDS TCA 72 bp | GGGGAATCCACTGCTCTTGGGCTCTGGTGGCAATGGTaGATGGCAGCCTCCCCAGGAGTCTTTGTGTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GESTALGLWWQW*MAASPGVFVWE Trigger: TTCCCACACAAAGACTCCTGGGGAGGCTGCCATTCACCATTGCCACCAGAGCCCAAGAGCAGTGGATTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS GCA 72 bp | GAAGAAGGGGGAAGCCGTTGTGGGGAAGCACTGCCCTaGACAGCCCTGATCCAGACTCCTTTGGTAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EEGGSRCGEALP*TALIQTPLVGK Trigger: CTTTCCTACCAAAGGAGTCTGGATCAGGGCTGTGCAGGGCAGTGCTTCCCCACAACGGCTTCCCCCTTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 ENSMUST00000203991.2 |
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| CDS GCA 72 bp | TGCCATGTCCTTGGTCAGTGTCCCAAGGTTGTTCAGTaGACTTGCGTGGCGTGGGTACAGCTTGAGGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CHVLGQCPKVVQ*TCVAWVQLEGG Trigger: ACCGCCCTCAAGCTGTACCCACGCCACGCAAGTGCACTGAACAACCTTGGGACACTGACCAAGGACATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000140797.4 |
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| CDS CAA 72 bp | GGGAACACGAGGAACAGCAAGCCGGCCAATACTTCCTaGTGCTCCAGCCTCTTGAAGGCTGCCACACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GNTRNSKPANTS*CSSLLKAATQC Trigger: GCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAAGGAAGTATTGGCCGGCTTGCTGTTCCTCGTGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS CAA 90 bp | GGAATGAACGGGAACACGAGGAACAGCAAGCCGGCCAATACTTCCTaGTGCTCCAGCCTCTTGAAGGCTGCCACACAGTGCAGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GMNGNTRNSKPANTS*CSSLLKAATQCRLS Trigger: ACTGAGCCTGCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAAGGAAGTATTGGCCGGCTTGCTGTTCCTCGTGTTCCCGTTCATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS GCA 72 bp | AACACGAGGAACAGCAAGCCGGCCAATACTTCCTTGTaGTCCAGCCTCTTGAAGGCTGCCACACAGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NTRNSKPANTSL*SSLLKAATQCR Trigger: CCTGCACTGTGTGGCAGCCTTCAAGAGGCTGGAGCACAAGGAAGTATTGGCCGGCTTGCTGTTCCTCGTGTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS GCA 72 bp | GTCCTTGGTCAGTGTCCCAAGGTTGTTCAGTGCACTTaGGTGGCGTGGGTACAGCTTGAGGGCGGTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VLGQCPKVVQCT*VAWVQLEGGSV Trigger: TACAGAACCGCCCTCAAGCTGTACCCACGCCACGCAAGTGCACTGAACAACCTTGGGACACTGACCAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000140797.4 |
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| CDS CCA 72 bp | TTGGGTCCTTGGGCTTCAGTTGAAGAGCCTTCTCTATaGCCTCGAGTGCCTTCCCATGGTGCTCCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPWASVEEPSL*PRVPSHGAPAC Trigger: GCAAGCAGGAGCACCATGGGAAGGCACTCGAGGCCATAGAGAAGGCTCTTCAACTGAAGCCCAAGGACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS TCA 72 bp | GGTTGTTCAGTGCACTTGCGTGGCGTGGGTACAGCTTaGGGGCGGTTCTGTAGTGGTAGATCGCTTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GCSVHLRGVGTA*GRFCSGRSLPC Trigger: ACAAGGAAGCGATCTACCACTACAGAACCGCCCTCAAGCTGTACCCACGCCACGCAAGTGCACTGAACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000140797.4 |
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| CDS GCA 72 bp | CTCCTGGGACTTGAGGAGATTCCCCAGATTGAAAAGTaGACGGTTGTGCTGCGGGTGGAGCTGCAATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLGLEEIPQIEK*TVVLRVELQCL Trigger: AAGGCATTGCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAATCTGGGGAATCTCCTCAAGTCCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 72 bp | TGGAACCAGCTTCAGGGCTCTCTCATAATAGGCCCTTaGAGACACATAGCTTCCCTGGATGTGCCGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: WNQLQGSLIIGP*RHIASLDVPDA Trigger: GGCATCCGGCACATCCAGGGAAGCTATGTGTCTGCAAGGGCCTATTATGAGAGAGCCCTGAAGCTGGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CAA 72 bp | ATCCCATATGGTCTCCACCAGAGGGATACTTCCCACTaGCCAGTCGTAGCACAGAGTGATGGGTGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPYGLHQRDTSH*PVVAQSDGCQQ Trigger: CTGCTGGCACCCATCACTCTGTGCTACGACTGGCAAGTGGGAAGTATCCCTCTGGTGGAGACCATATGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS CAA 90 bp | GTTCCTCACATCCCATATGGTCTCCACCAGAGGGATACTTCCCACTaGCCAGTCGTAGCACAGAGTGATGGGTGCCAGCAGAAGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: VPHIPYGLHQRDTSH*PVVAQSDGCQQKPY Trigger: GTATGGCTTCTGCTGGCACCCATCACTCTGTGCTACGACTGGCAAGTGGGAAGTATCCCTCTGGTGGAGACCATATGGGATGTGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS GCA 72 bp | TCCCTCTTCCTTGAGGAGATTCCCCAGATTGAAAAGTaGACGGTTGTGCTGCGGGTGGAGCTGCAATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFLEEIPQIEK*TVVLRVELQCL Trigger: AAGGCATTGCAGCTCCACCCGCAGCACAACCGTGCACTTTTCAATCTGGGGAATCTCCTCAAGGAAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS CCA 72 bp | GGATTGCTGACAGGAGGCGGTAGCACTCCAGGCACCTaGGCTCCTCAGAGACTATATGGCTGGTTATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLLTGGGSTPGT*APQRLYGWLSF Trigger: AAAAGATAACCAGCCATATAGTCTCTGAGGAGCCCAGGTGCCTGGAGTGCTACCGCCTCCTGTCAGCAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS CCA 72 bp | TTGGTCAGTGTCCCAAGGTTGTTCAGTGCACTTGCGTaGCGTGGGTACAGCCTGAATAAGGACTCTCTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVSVPRLFSALA*RGYSLNKDSLD Trigger: GTCGAGAGAGTCCTTATTCAGGCTGTACCCACGCCACGCAAGTGCACTGAACAACCTTGGGACACTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100772.10 |
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| CDS CAA 90 bp | TCCCGTTCTCTGACTTCTTGTAACCTCCTCTCCAGGCGATCCAGCTaGGCCAGATTTTCCTTCAGCAGCTTGCTGTCTGGAACCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLTSCNLLSRRSS*ARFSFSSLLSGTSF Trigger: GAAGCTGGTTCCAGACAGCAAGCTGCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGGAGAGGAGGTTACAAGAAGTCAGAGAACGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 72 bp | GAAAAGTGCACGGTTGTGCTGCGGGTGGAGCTGCAATaGCTTCTGGTAGTACATCTTAGCTTCTGCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: EKCTVVLRVELQ*LLVVHLSFCHV Trigger: GACATGGCAGAAGCTAAGATGTACTACCAGAAGGCATTGCAGCTCCACCCGCAGCACAACCGTGCACTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS CAA 72 bp | CTGACTTCTTGTAACCTCCTCTCCAGGCGATCCAGCTaGGCCAGATTTTCCTTCAGCAGCTTGCTGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTSCNLLSRRSS*ARFSFSSLLSG Trigger: TCCAGACAGCAAGCTGCTGAAGGAAAATCTGGCCAAGCTGGATCGCCTGGAGAGGAGGTTACAAGAAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS GCA 72 bp | GAGCTGCAATGCCTTCTGGTAGTACATCTTAGCTTCTaGCATGTCCTTGGTCAGTGTCCCAAGGTTGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELQCLLVVHLSF*HVLGQCPKVVQ Trigger: CTGAACAACCTTGGGACACTGACCAAGGACATGGCAGAAGCTAAGATGTACTACCAGAAGGCATTGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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| CDS CAA 90 bp | TGCACCGCAAAGAGCAAAGCTGTGACAAACGCCAGTCCGCGATTCTaGAAGACTGTTTTATCACAGGTATACATCAGCACAAGGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CTAKSKAVTNASPRF*KTVLSQVYISTRVT Trigger: GGTGACCCTTGTGCTGATGTATACCTGTGATAAAACAGTCTTCAAGAATCGCGGACTGGCGTTTGTCACAGCTTTGCTCTTTGCGGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 ENSMUST00000203991.2 |
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| CDS TCA 72 bp | AGAAAGGGTTCATGCCAGTCAGAAATATGTTTAGCCTaGAGGACAGCACGCACAGTGGCCGATAGGACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKGSCQSEICLA*RTARTVADRTC Trigger: ACAAGTCCTATCGGCCACTGTGCGTGCTGTCCTTCAGGCTAAACATATTTCTGACTGGCATGAACCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 |
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| CDS TCA 72 bp | GACATGATTTCATCCACTCGATTCGGAGACTCACACTaGGACATGGCTCCTTCTCCCTTTGCAGGAGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: DMISSTRFGDSH*DMAPSPFAGVL Trigger: TAAAACTCCTGCAAAGGGAGAAGGAGCCATGTCTCAGTGTGAGTCTCCGAATCGAGTGGATGAAATCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140797.4 |
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| CDS GCA 72 bp | GTAAGGATGTATGGCGAGAATGAAGCTGGATTGTCTTaGTCTGAGAAGAGGGGCATAGTTCCTCCCATTATC | + |
|
Preference number: 6 (lower is better) Translates to: VRMYGENEAGLS*SEKRGIVPPII Trigger: GATAATGGGAGGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCAGCTTCATTCTCGCCATACATCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060095.15 ENSMUST00000100772.10 ENSMUST00000140797.4 |
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