Pregenerated sensors for TMSB15L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072955

Ensembl transcript IDs: ENSMUST00000127404.8

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	TTTAATGTCACAGTCGAAATGAAAATAGGCCCAAGGAGCTGTGAAACTATGCAAAGCCAGGGTAGTAAATaGATCTACCAGGAGCTGCCT	+
Preference number: 2 (lower is better) Translates to: FNVTVEMKIGPRSCETMQSQGSK*IYQELP Trigger: AGGCAGCTCCTGGTAGATCCATTTACTACCCTGGCT...TTGCATAGTTTCACAGCTCCTTGGGCCTATTTTCATTTCGACTGTGACATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127404.8
3UTR-3UTR CCA 90 bp	ACAAAGAGTGTACCATGGGAAGTTTGGGACTATAATTTAATGTCACAGTCGAAAGCCAACAAAAGAGTGTaGACAAGGAAGTTACACACC	+
Preference number: 2 (lower is better) Translates to: TKSVPWEVWDYNLMSQSKANKRV*TRKLHT Trigger: GGTGTGTAACTTCCTTGTCCACACTCTTTTGTTGGC...TTTCGACTGTGACATTAAATTATAGTCCCAAACTTCCCATGGTACACTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127404.8
3UTR CCA 72 bp	GAAAAACCTATATGCACCAAGGCCAACAAAAGAGTGTaGACAAGGAAGTTACACACCAGTGAGCAGTACCAA	+
Preference number: 3 (lower is better) Translates to: EKPICTKANKRV*TRKLHTSEQYQ Trigger: TTGGTACTGCTCACTGGTGTGTAACTTCCTTGTCCACACTCTTTTGTTGGCCTTGGTGCATATAGGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127404.8
CDS-3UTR CCA 90 bp	TCTTGCCTTGCAAAGCAAATGAAAAACCTATATGCACCAAGGCCAACAAAAGAGTGTTCTTTCTCTTGCTaGATAGTTTCCTTCGACGGA	+
Preference number: 4 (lower is better) Translates to: SCLAKQMKNLYAPRPTKECSFSC*IVSFDG Trigger: TCCGTCGAAGGAAACTATCCAGCAAGAGAAAGAACA...CTCTTTTGTTGGCCTTGGTGCATATAGGTTTTTCATTTGCTTTGCAAGGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127404.8
CDS-3UTR GCA 90 bp	CAACTGAGCACCTACTGTAGGTTAAAATTGTCTTGCCTTGCAAAGCAAATGAAATTGTGTTCTTTCTCTTaGTGGATAGTTTCCTTCGAC	+
Preference number: 4 (lower is better) Translates to: QLSTYCRLKLSCLAKQMKLCSFS*WIVSFD Trigger: GTCGAAGGAAACTATCCAGCAAGAGAAAGAACACAA...TTTCATTTGCTTTGCAAGGCAAGACAATTTTAACCTACAGTAGGTGCTCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127404.8
CDS-3UTR CAA 90 bp	TTTATTGGAAACAAGTACCCTTGTGTAATTTTATCCCTTAGGCTACAAAGAGTGATTGTGTTCTTTCTCTaGCTGGATAGTTTCCTTCGA	+
Preference number: 5 (lower is better) Translates to: FIGNKYPCVILSLRLQRVIVFFL*LDSFLR Trigger: TCGAAGGAAACTATCCAGCAAGAGAAAGAACACAAT...CACTCTTTGTAGCCTAAGGGATAAAATTACACAAGGGTACTTGTTTCCAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127404.8