RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMPRSS9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059406

Ensembl transcript IDs: ENSMUST00000105333.3, ENSMUST00000219817.2

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GGACTCCCATGTTTGCCTGCTACCAACTCCTCAGCGTaGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCA +
Preference number: 3 (lower is better)
Translates to: GLPCLPATNSSA*GGWPVAVFLSP
Trigger: TGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGTAGCAGGCAAACATGGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTGCACACTGCCCGCCTaGGCGGCCCACTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCCTLPA*AAHCAG
Trigger: CCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGCGGGAAGACGTGCGTaGCCGCGGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGAGRRA*PRGGRQ
Trigger: CTGCCTGCCTCCCCGCGGCCACGCACGTCTTCCCGC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGCAGCTGCCGCGCCATaGAGCCTCCCTCGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCAAAAP*SLPRAA
Trigger: CGCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGC...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGCACACTGCCCGCCTaGGCGGCCCACTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLCTLPA*AAHCAG
Trigger: CCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCA...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCGGGAAGACGTGCGTaGCCGCGGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPAGRRA*PRGGRQ
Trigger: CTGCCTGCCTCCCCGCGGCCACGCACGTCTTCCCGC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCAGCTGCCGCGCCATaGAGCCTCCCTCGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLAAAAP*SLPRAA
Trigger: CGCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCGCTCAGGTGCACACTaGCCGCCTGGGCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPRSGAH*PPGRPT
Trigger: AGTGGGCCGCCCAGGCGGGCAGTGTGCACCTGAGCG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGCCGTAGTGCTGGGGTaGAGTGGCACAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGAVVLG*SGTGLG
Trigger: CCCCAGCCCTGTGCCACTGCACCCCAGCACTACGGC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCCAGCAGGGACACGGTaGCCAGGTGCGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCPAGTR*PGAPAP
Trigger: AGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACCGCCCCACATCGGTaGTCCCTGCGCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLTAPHR*SLRRSH
Trigger: GTGGCTGCGGCGCAGGGAGCACCGATGTGGGGCGGT...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTACCGCCCCACATCGGTaGTCCCTGCGCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPTAPHR*SLRRSH
Trigger: GTGGCTGCGGCGCAGGGAGCACCGATGTGGGGCGGT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGCGGCCTTCTGCAGCTaGCGCGCCATGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRAAFCS*RAMEPP
Trigger: GGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCGGCCTTCTGCAGCTaGCGCGCCATGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLAAFCS*RAMEPP
Trigger: GGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCCAGATGGCTCCCTaGAGGCCAGGGGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPGQMAP*RPGVPL
Trigger: CAGGGGGACCCCTGGCCTGCAGGGAGCCATCTGGCC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGGCCAGATGGCTCCCTaGAGGCCAGGGGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRGQMAP*RPGVPL
Trigger: CAGGGGGACCCCTGGCCTGCAGGGAGCCATCTGGCC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCCCCCGGAGTCCCCCTaGCAGGAGTCTACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGPPESP*QESTFP
Trigger: CGGGAAGGTAGACTCCTGCCAGGGGGACTCCGGGGG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCACGATCCTGCCAGCTaGCCTCCAGGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCHDPAS*PPGRLP
Trigger: TGGCAGCCTGCCTGGAGGTCAGCTGGCAGGATCGTG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCTGGGCGCCGCGCTTCTaGGCAGCCGATTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRWAPRF*AADSPA
Trigger: AGCTGGGGAATCGGCTGCGCAGAAGCGCGGCGCCCA...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGGGCGCCGCGCTTCTaGGCAGCCGATTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLWAPRF*AADSPA
Trigger: AGCTGGGGAATCGGCTGCGCAGAAGCGCGGCGCCCA...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCGTAGTGCTGGGGTaGAGTGGCACAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPAVVLG*SGTGLG
Trigger: CCCCAGCCCTGTGCCACTGCACCCCAGCACTACGGC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCAGCAGGGACACGGTaGCCAGGTGCGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLPAGTR*PGAPAP
Trigger: AGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGGCCAGGGGTCCCCCTaGATCACCCGAGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRGQGSP*ITRAAV
Trigger: GACAGCTGCTCGGGTGATGCAGGGGGACCCCTGGCC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGCCAGGGGTCCCCCTaGATCACCCGAGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLGQGSP*ITRAAV
Trigger: GACAGCTGCTCGGGTGATGCAGGGGGACCCCTGGCC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCTGGGAAGTGGGGCCTaGCACAGCCGTAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLLGSGA*HSRSPS
Trigger: GCTGGGGCTACGGCTGTGGCAGGCCCCACTTCCCAG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCCCCGGAGTCCCCCTaGCAGGAGTCTACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLPPESP*QESTFP
Trigger: CGGGAAGGTAGACTCCTGCCAGGGGGACTCCGGGGG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGGGCAGCGGTGGGTTTaGCAAAGGTGTTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGGQRWV*QRCWAP
Trigger: GGGCGCCCAACACCTTTGCCAAACCCACCGCTGCCC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGCAGTGGCACAGGGCTaGGGGCAGCGGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRAVAQG*GQRWVW
Trigger: CCAAACCCACCGCTGCCCCCAGCCCTGTGCCACTGC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCAGTGGCACAGGGCTaGGGGCAGCGGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLAVAQG*GQRWVW
Trigger: CCAAACCCACCGCTGCCCCCAGCCCTGTGCCACTGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGTCCTTCCTTCAGGCTaGCCTGCCAGGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGVLPSG*PARAPP
Trigger: GGGAGGTGCCCTGGCAGGCCAGCCTGAAGGAAGGAC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCGTGTGCTGGAGGTGTaGGGGCGAGCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGRVLEV*GRAMEL
Trigger: CAGCTCCATGGCTCGCCCCCACACCTCCAGCACACG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGGTGCCCGGTGCACTTaGGGCTGCTGTCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGGARCT*GCCLSP
Trigger: AGGGGACAGACAGCAGCCCCAAGTGCACCGGGCACC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCACGCGCTCCAACTaGCCCTCCGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPATRSN*PSVLLR
Trigger: CCTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCCACGCGCTCCAACTaGCCCTCCGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLATRSN*PSVLLR
Trigger: CCTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCAATCCCGCAGCCTGGTaGCTCGGGTGTAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCNPAAW*LGCRPL
Trigger: CAGGGGTCTACACCCGAGTCACCAGGCTGCGGGATT...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCTCCTCCCACGATCCTaGCAGCTGACCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGLLPRS*QLTSRQ
Trigger: CTGCCTGGAGGTCAGCTGGCAGGATCGTGGGAGGAG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACACGGTGCCCAGGTaGGCCTGCACCTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPDTVPR*ACTCST
Trigger: AGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTGCTCAGGAATGGGGTaGCCAGGAAGGCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCCSGMG*PGRPPT
Trigger: AGTGGGCGGCCTTCCTGGGCACCCCATTCCTGAGCA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTACTGGCCCTCCGTGCTaGTCAGGAATGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGTGPPC*SGMGCP
Trigger: TGGGCACCCCATTCCTGAGCAGCACGGAGGGCCAGT...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGTGTGCGCACAGCGCTaGCCTCTGACCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRVCAQR*PLTRSG
Trigger: ACCTGAGCGGGTCAGAGGCCAGCGCTGTGCGCACAC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGTGCGCACAGCGCTaGCCTCTGACCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPVCAQR*PLTRSG
Trigger: ACCTGAGCGGGTCAGAGGCCAGCGCTGTGCGCACAC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGGGCAGCGGTGGGTTTaGCAAAGGTGTTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRGQRWV*QRCWAP
Trigger: GGGCGCCCAACACCTTTGCCAAACCCACCGCTGCCC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGTCCTTCCTTCAGGCTaGCCTGCCAGGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRVLPSG*PARAPP
Trigger: GGGAGGTGCCCTGGCAGGCCAGCCTGAAGGAAGGAC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGTGGGGGCGAGCCATaGAGCTGGGGTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGCGGEP*SWGLRT
Trigger: TGTCCTCAGACCCCAGCTCCATGGCTCGCCCCCACA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCGTGTGCTGGAGGTGTaGGGGCGAGCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRRVLEV*GRAMEL
Trigger: CAGCTCCATGGCTCGCCCCCACACCTCCAGCACACG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCACCCATTGGCCAGATaGCTCCCTGCAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPHPLAR*LPAGQG
Trigger: CCCCTGGCCTGCAGGGAGCCATCTGGCCAATGGGTG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCACCCATTGGCCAGATaGCTCCCTGCAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRHPLAR*LPAGQG
Trigger: CCCCTGGCCTGCAGGGAGCCATCTGGCCAATGGGTG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACACCATCCTGTCGGTaGGCGAGTGGCCGTACAGGC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLTPSCR*ASGRTG
Trigger: GCCTGTACGGCCACTCGCTCACCGACAGGATGGTGT...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCACACCATCCTGTCGGTaGGCGAGTGGCCGTACAGGC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRTPSCR*ASGRTG
Trigger: GCCTGTACGGCCACTCGCTCACCGACAGGATGGTGT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCAATCCCGCAGCCTGGTaGCTCGGGTGTAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRNPAAW*LGCRPL
Trigger: CAGGGGTCTACACCCGAGTCACCAGGCTGCGGGATT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCGTAGCCCCAGCTGGTaGCCCCAGTTAGCACCCATT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGRSPSW*PQLAPI
Trigger: AATGGGTGCTAACTGGGGTCACCAGCTGGGGCTACG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCCTCCCACGATCCTaGCAGCTGACCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRLLPRS*QLTSRQ
Trigger: CTGCCTGGAGGTCAGCTGGCAGGATCGTGGGAGGAG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGTGCCCAGGTGCGCCTaGACCTGCTCCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLVPRCA*TCSTLV
Trigger: CACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCAC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGTGCCCAGGTGCGCCTaGACCTGCTCCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRVPRCA*TCSTLV
Trigger: CACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCAC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGGCAGGAGTCAACTCTaGCCTCCAGGAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGGRSQL*PPGSQH
Trigger: GTGCTGGCTTCCTGGAGGGCAGAGTTGACTCCTGCC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGAGAGTGTATGGTGGTaGCCGGTGCACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCESVWW*PVHLGL
Trigger: CAGCCCCAAGTGCACCGGGCACCACCATACACTCTC...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTAGCCACAGGCTCACTTaGCAGGGCCACTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPSHRLT*QGHSPS
Trigger: GCTTGGGGAGTGGCCCTGGCAAGTGAGCCTGTGGCT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCAGCCACAGGCTCACTTaGCAGGGCCACTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRSHRLT*QGHSPS
Trigger: GCTTGGGGAGTGGCCCTGGCAAGTGAGCCTGTGGCT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCTGCTCAGGAATGGGGTaGCCAGGAAGGCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRCSGMG*PGRPPT
Trigger: AGTGGGCGGCCTTCCTGGGCACCCCATTCCTGAGCA...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACTGGCCCTCCGTGCTaGTCAGGAATGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLTGPPC*SGMGCP
Trigger: TGGGCACCCCATTCCTGAGCAGCACGGAGGGCCAGT...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTACTGCGGCCTTCTaGAGCTGCCGCGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRLTAAF*SCRAME
Trigger: CTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCTTACTGCGGCCTTCTaGAGCTGCCGCGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPLTAAF*SCRAME
Trigger: CTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGCTCGACTGACACGATaGTGCCATAGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCARLTR*CHRQPG
Trigger: CCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGC...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGTCCATGGCGGGTCTaGCCCCACACTCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGCPWRV*PHTLVA
Trigger: AGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGGTCACCCACCACGGTaGCTCCGCAGAAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGGHPPR*LRRNVW
Trigger: CCAGACATTTCTGCGGAGCCACCGTGGTGGGTGACC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCCAGGCTTCTTAGCCTaGGCACAGCCAATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCPGFLA*AQPMPQ
Trigger: CTGGGGCATTGGCTGTGCCCAGGCTAAGAAGCCTGG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTGTGGGGGCGAGCCATaGAGCTGGGGTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPCGGEP*SWGLRT
Trigger: TGTCCTCAGACCCCAGCTCCATGGCTCGCCCCCACA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGCTGGTGGTGGCCTCTaGGATAATGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGAGGGL*DNEASS
Trigger: GCTGCTGGCCTCATTATCCCAGAGGCCACCACCAGC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGGAGAAGAAGGCTaGAAGGACTCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGCGEEG*KDSQGH
Trigger: GTGACCCTGGGAGTCCTTTCAGCCTTCTTCTCCGCA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCGTAGCCCCAGCTGGTaGCCCCAGTTAGCACCCATT +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPRSPSW*PQLAPI
Trigger: AATGGGTGCTAACTGGGGTCACCAGCTGGGGCTACG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTAGGTGCGCCTGCACCTaGTCCACTTTGGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGRCACT*STLVWL
Trigger: CAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCT...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCCCACGGACGCCTTCTaGAAGATGTCAGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCPTDAF*KMSGLV
Trigger: CACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGCAGGAGTCAACTCTaGCCTCCAGGAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLGRSQL*PPGSQH
Trigger: GTGCTGGCTTCCTGGAGGGCAGAGTTGACTCCTGCC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGAGAGTGTATGGTGGTaGCCGGTGCACTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPESVWW*PVHLGL
Trigger: CAGCCCCAAGTGCACCGGGCACCACCATACACTCTC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTGTCCATGGCGGGTCTaGCCCCACACTCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPCPWRV*PHTLVA
Trigger: AGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGTGTGGTTGAAACAGTaGGCGGCAGACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGVWLKQ*AADSSQ
Trigger: CTGGCTGCTGTCTGCCGCCCACTGTTTCAACCACAC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCCGACTGGGAACTTGTaGATGGCCAGGGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCPTGNL*MARGRQ
Trigger: TTGTCTGCCCCTGGCCATCCACAAGTTCCCAGTCGG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTACACTTCCGGCCGACTaGGAACTTGTGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGTLPAD*ELVDGQ
Trigger: CTGGCCATCCACAAGTTCCCAGTCGGCCGGAAGTGT...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCCAGGCTTCTTAGCCTaGGCACAGCCAATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRPGFLA*AQPMPQ
Trigger: CTGGGGCATTGGCTGTGCCCAGGCTAAGAAGCCTGG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCTGGTGGTGGCCTCTaGGATAATGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLAGGGL*DNEASS
Trigger: GCTGCTGGCCTCATTATCCCAGAGGCCACCACCAGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGTCCACGCCACCCTGTaGGAAGCCTGCACACAACAT +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCVHATL*EACTQH
Trigger: ATGTTGTGTGCAGGCTTCCCACAGGGTGGCGTGGAC...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTGCGGAGAAGAAGGCTaGAAGGACTCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPCGEEG*KDSQGH
Trigger: GTGACCCTGGGAGTCCTTTCAGCCTTCTTCTCCGCA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGATTCTCTCGAAGACTaGCCTGCCAGGGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLDSLED*PARGTP
Trigger: GGGAGTTCCCCTGGCAGGTCAGTCTTCGAGAGAATC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGATTCTCTCGAAGACTaGCCTGCCAGGGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPDSLED*PARGTP
Trigger: GGGAGTTCCCCTGGCAGGTCAGTCTTCGAGAGAATC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCTCCACCGTGGCTTTCTaGAGGACCTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRSTVAF*RTSGFT
Trigger: GGTGAAGCCAGAGGTCCTTCAGAAAGCCACGGTGGA...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTCCACCGTGGCTTTCTaGAGGACCTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPSTVAF*RTSGFT
Trigger: GGTGAAGCCAGAGGTCCTTCAGAAAGCCACGGTGGA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCAGGAAGAACCTTCCTaGAGGCTCCTCGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRQEEPS*RLLADQ
Trigger: CTGGTCTGCGAGGAGCCTTCAGGAAGGTTCTTCCTG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCAGGAAGAACCTTCCTaGAGGCTCCTCGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLQEEPS*RLLADQ
Trigger: CTGGTCTGCGAGGAGCCTTCAGGAAGGTTCTTCCTG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCCACTTTGGTGTGGTTaGAACAGTGGGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCPLWCG*NSGRQT
Trigger: TGTCTGCCGCCCACTGTTTCAACCACACCAAAGTGG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCCACTTTGGTGTGGTTaGAACAGTGGGCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGPLWCG*NSGRQT
Trigger: TGTCTGCCGCCCACTGTTTCAACCACACCAAAGTGG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCATGGAGCTGGGGTCTaGGGACATCGCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGHGAGV*GHRFQD
Trigger: ATCCTGAAAGCGATGTCCTCAGACCCCAGCTCCATG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCCACAATCTGGCAGGTaGGAGTGTATGGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRPQSGR*ECMVVP
Trigger: GGGCACCACCATACACTCTCACCTGCCAGATTGTGG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCCACAATCTGGCAGGTaGGAGTGTATGGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPPQSGR*ECMVVP
Trigger: GGGCACCACCATACACTCTCACCTGCCAGATTGTGG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCAAGATGTCTGCTTCCTaGTTCAGGCTCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCKMSAS*FRLRGW
Trigger: CCAGCCCCTGAGCCTGAAGCAGGAAGCAGACATCTT...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCGACTGACACGATGGTaGCATAGGCAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCRLTRW*HRQPGK
Trigger: TTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCGACTGACACGATGGTaGCATAGGCAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGRLTRW*HRQPGK
Trigger: TTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTAGGTGCGCCTGCACCTaGTCCACTTTGGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPRCACT*STLVWL
Trigger: CAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGTGGCATTTCCCTCCTaGATGTTGCCCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLVAFPS*MLPQPE
Trigger: CTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCAC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGGCATTTCCCTCCTaGATGTTGCCCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPVAFPS*MLPQPE
Trigger: CTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCAC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCCACGGACGCCTTCTaGAAGATGTCAGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLPTDAF*KMSGLV
Trigger: CACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCGCCAGCTCCAGCAGTaGCACGTCATAGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRRQLQQ*HVIVQC
Trigger: ACACTGGACTATGACGTGGCACTGCTGGAGCTGGCG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTACAAGGGCCAGGGTCTaGAGCAGATACAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGTRARV*SRYRDS
Trigger: GCTGTCTCTGTATCTGCTCCAGACCCTGGCCCTTGT...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCTCCGCAGAAATGTCTaGGTCCTTCCTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGLRRNV*VLPSGW
Trigger: CCAGCCTGAAGGAAGGACCCAGACATTTCTGCGGAG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGTGGTTGAAACAGTaGGCGGCAGACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPVWLKQ*AADSSQ
Trigger: CTGGCTGCTGTCTGCCGCCCACTGTTTCAACCACAC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTTGAAGACCAATGGCTaGGCTAACTCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCLKTNG*ANSSRA
Trigger: GGCCCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCCGACTGGGAACTTGTaGATGGCCAGGGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRPTGNL*MARGRQ
Trigger: TTGTCTGCCCCTGGCCATCCACAAGTTCCCAGTCGG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTACACTTCCGGCCGACTaGGAACTTGTGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPTLPAD*ELVDGQ
Trigger: CTGGCCATCCACAAGTTCCCAGTCGGCCGGAAGTGT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCTGTCTGTCCCCTGGTaGTGGTACTCCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPLSVPW*WYSWQT
Trigger: TGTCTGCCAGGAGTACCACCACCAGGGGACAGACAG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCTGTCTGTCCCCTGGTaGTGGTACTCCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLLSVPW*WYSWQT
Trigger: TGTCTGCCAGGAGTACCACCACCAGGGGACAGACAG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTGCTGCTGATCTGCACTaGGTAGAAGCGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGAADLH*VEAATC
Trigger: ACATGTCGCCGCTTCTACCCAGTGCAGATCAGCAGC...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCGCTGCTGATCTGCACTaGGTAGAAGCGGCGACATGT +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCAADLH*VEAATC
Trigger: ACATGTCGCCGCTTCTACCCAGTGCAGATCAGCAGC...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGTCCACGCCACCCTGTaGGAAGCCTGCACACAACAT +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLVHATL*EACTQH
Trigger: ATGTTGTGTGCAGGCTTCCCACAGGGTGGCGTGGAC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCCAGTTAGCACCCATTaGCCAGATGGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPPVSTH*PDGSLQ
Trigger: CTGCAGGGAGCCATCTGGCCAATGGGTGCTAACTGG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCAGTTAGCACCCATTaGCCAGATGGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLPVSTH*PDGSLQ
Trigger: CTGCAGGGAGCCATCTGGCCAATGGGTGCTAACTGG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTCGAGTGTAGACACCTaGGAAGTGGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPSSVDT*EVGPAT
Trigger: TGTGGCAGGCCCCACTTCCCAGGTGTCTACACTCGA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTCGAGTGTAGACACCTaGGAAGTGGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLSSVDT*EVGPAT
Trigger: TGTGGCAGGCCCCACTTCCCAGGTGTCTACACTCGA...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCAGAGCATGCGGTCAGTaGGGGAGAAGTTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRRACGQ*GRSCTG
Trigger: CCCTGTACAACTTCTCCCTCACTGACCGCATGCTCT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCATGGAGCTGGGGTCTaGGGACATCGCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRHGAGV*GHRFQD
Trigger: ATCCTGAAAGCGATGTCCTCAGACCCCAGCTCCATG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCTGCCCCAGCTCACGATaGCAGCCAGGTAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRCPSSR*QPGKRH
Trigger: GTGTCTTTTACCTGGCTGGCATCGTGAGCTGGGGCA...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTACAAGGGCCAGGGTCTaGAGCAGATACAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPTRARV*SRYRDS
Trigger: GCTGTCTCTGTATCTGCTCCAGACCCTGGCCCTTGT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCCAGCAATTCCACCGTaGCTTTCTGAAGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGPAIPP*LSEGPL
Trigger: CAGAGGTCCTTCAGAAAGCCACGGTGGAATTGCTGG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCCGCAGAAATGTCTaGGTCCTTCCTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRLRRNV*VLPSGW
Trigger: CCAGCCTGAAGGAAGGACCCAGACATTTCTGCGGAG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCTTGAAGACCAATGGCTaGGCTAACTCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRLKTNG*ANSSRA
Trigger: GGCCCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAA...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCCACAGAAGTGTTCGTaGTTCTCTCGAAGACTGACC +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGPQKCS*FSRRLT
Trigger: GGTCAGTCTTCGAGAGAATCACGAACACTTCTGTGG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACATCTTCTGCTCTATaGTGCCCACGGACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLTSSAL*CPRTPS
Trigger: AGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGT...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCACATCTTCTGCTCTATaGTGCCCACGGACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRTSSAL*CPRTPS
Trigger: AGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGACAACATACGGCTGCTaGTCTGCACTGGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLTTYGC*SALGRS
Trigger: GCTTCTACCCAGTGCAGATCAGCAGCCGTATGTTGT...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCTCACAAACAGTGTCTaGAGAGCATGCGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGLTNSV*RACVSR
Trigger: CCTACTCACGCATGCTCTGCAGACACTGTTTGTGAG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGCTCCACACATCTTCTaGTCTATGATGCCCACGGAC +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLAPHIF*SMMPTD
Trigger: GTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGCTCCACACATCTTCTaGTCTATGATGCCCACGGAC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRAPHIF*SMMPTD
Trigger: GTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGTCGAAACAGTGTGCTaGAGACAGAAGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRVETVC*RQKPPL
Trigger: GAGAGGTGGCTTCTGTCTGCAGCACACTGTTTCGAC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTCCTGCAGCCTTGCCTaGATTCCTTTCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGSCSLA*IPFCKM
Trigger: CATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTCCTGCAGCCTTGCCTaGATTCCTTTCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCSCSLA*IPFCKM
Trigger: CATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGCCAGCAATTCCACCGTaGCTTTCTGAAGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLPAIPP*LSEGPL
Trigger: CAGAGGTCCTTCAGAAAGCCACGGTGGAATTGCTGG...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCAAAGTCCAGGATTCCTaGGTTGTAGCGGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRKVQDS*VVAGMQ
Trigger: CTGCATCCCCGCTACAACCCAGGAATCCTGGACTTT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTAAAGTCCAGGATTCCTaGGTTGTAGCGGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPKVQDS*VVAGMQ
Trigger: CTGCATCCCCGCTACAACCCAGGAATCCTGGACTTT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCATTCCTGGATGTTCTaGCCTATCCATCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGHSWMF*PIHPST
Trigger: TGTGCTGGGATGGATAGGCCAGAACATCCAGGAATG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR TCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCCACAGAAGTGTTCGTaGTTCTCTCGAAGACTGACC +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRPQKCS*FSRRLT
Trigger: GGTCAGTCTTCGAGAGAATCACGAACACTTCTGTGG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTTGTTCCTGCAGCCTTaGCTGGATTCCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGLFLQP*LDSFLQ
Trigger: TTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTTGTTCCTGCAGCCTTaGCTGGATTCCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCLFLQP*LDSFLQ
Trigger: TTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR GCA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGAAAGACCTTGTTCCTaGAGCCTTGCCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRERPCS*SLAWIP
Trigger: AGGAATCCAGGCAAGGCTGCAGGAACAAGGTCTTTC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTCATTCCTGGATGTTCTaGCCTATCCATCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPHSWMF*PIHPST
Trigger: TGTGCTGGGATGGATAGGCCAGAACATCCAGGAATG...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCAGTGTTGTGTTGAGTaGTCTAGTGGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCQCCVE*SSGHSD
Trigger: ATCAGAGTGACCACTAGACCACTCAACACAACACTG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CCA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCAGTGTTGTGTTGAGTaGTCTAGTGGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGQCCVE*SSGHSD
Trigger: ATCAGAGTGACCACTAGACCACTCAACACAACACTG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp CGCATCGAGCGCCGTCAGGGGGCCTTGCGGGACCTGGTAGGCAGATaGGTCGCACCAAGCGGCTGCGGCGCACGGGTCCCGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RIERRQGALRDLVGR*VAPSGCGARVPPAP
Trigger: TGGAGCTGGCGGGACCCGTGCGCCGCAGCCGCTTGGTGCGACCCATCTGCCTACCAGGTCCCGCAAGGCCCCCTGACGGCGCTCGATGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp CGGAGCACGCGTGTGCGCACAGCGCTGGCCTCTGACCCGCTCAGGTaGACACTGCCCGCCTGGGCGGCCCACTGCGCAGGGTCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RSTRVRTALASDPLR*TLPAWAAHCAGSWN
Trigger: ATTCCAGGACCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCACCTGAGCGGGTCAGAGGCCAGCGCTGTGCGCACACGCGTGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp ACCGCCCCACATCGGTGCTCCCTGCGCCGCAGCCACAGGCTCACTTaGCAGGGCCACTCCCCAAGCGAGGCTGCGCTGCCGCCCACTATC +
Preference number: 5 (lower is better)
Translates to: TAPHRCSLRRSHRLT*QGHSPSEAALPPTI
Trigger: GATAGTGGGCGGCAGCGCAGCCTCGCTTGGGGAGTGGCCCTGGCAAGTGAGCCTGTGGCTGCGGCGCAGGGAGCACCGATGTGGGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp GCTCTCAGGGCTGGTAGGCCAGGGAGTGCTGGGGGTGGCGGGCGCTaGAGTCGCGGTGGGGACCACAGGCATGTCAGCAGCGCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: ALRAGRPGSAGGGGR*SRGGDHRHVSSAGH
Trigger: GTGACCAGCGCTGCTGACATGCCTGTGGTCCCCACCGCGACTCCAGCGCCCGCCACCCCCAGCACTCCCTGGCCTACCAGCCCTGAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp GCAGACAGAAGCCACCTCTCGGCCACCAGTACCGCCCCACATCGGTaGTCCCTGCGCCGCAGCCACAGGCTCACTTGCCAGGGCCACTCC +
Preference number: 5 (lower is better)
Translates to: ADRSHLSATSTAPHR*SLRRSHRLTCQGHS
Trigger: GGAGTGGCCCTGGCAAGTGAGCCTGTGGCTGCGGCGCAGGGAGCACCGATGTGGGGCGGTACTGGTGGCCGAGAGGTGGCTTCTGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp GGGCTCCCGCCGACACCCAGCAGGGACACGGTGCCCAGGTGCGCCTaGACCTGCTCCACTTTGGTGTGGTTGAAACAGTGGGCGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GLPPTPSRDTVPRCA*TCSTLVWLKQWAAD
Trigger: GTCTGCCGCCCACTGTTTCAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGGGTGTCGGCGGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp CGACATGTCTGTTCACTGAGGACCCTTACTGCGGCCTTCTGCAGCTaGCGCGCCATGGAGCCTCCCTCGCGCAGCGAGCCCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RHVCSLRTLTAAFCS*RAMEPPSRSEPQPV
Trigger: CACCGGCTGGGGCTCGCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp TTCACGGGGCTCCCGCCGACACCCAGCAGGGACACGGTGCCCAGGTaGGCCTGCACCTGCTCCACTTTGGTGTGGTTGAAACAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: FTGLPPTPSRDTVPR*ACTCSTLVWLKQWA
Trigger: CGCCCACTGTTTCAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGGGTGTCGGCGGGAGCCCCGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp AAGCGGCGACATGTCTGTTCACTGAGGACCCTTACTGCGGCCTTCTaGAGCTGCCGCGCCATGGAGCCTCCCTCGCGCAGCGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: KRRHVCSLRTLTAAF*SCRAMEPPSRSEPQ
Trigger: CTGGGGCTCGCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATGTCGCCGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGGTGCCCGGTGCACTaGGGGCTGCTGTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGWCPVH*GLLSVP
Trigger: GGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp ACAGCAGCCAGCGGTCACCCACCACGGTGGCTCCGCAGAAATGTCTaGGTCCTTCCTTCAGGCTGGCCTGCCAGGGCACCTCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: TAASGHPPRWLRRNV*VLPSGWPARAPPQT
Trigger: TGTCTGGGGAGGTGCCCTGGCAGGCCAGCCTGAAGGAAGGACCCAGACATTTCTGCGGAGCCACCGTGGTGGGTGACCGCTGGCTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTCGGCCGACTGGGAACTaGTGGATGGCCAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGRPTGN*WMARGR
Trigger: TCTGCCCCTGGCCATCCACAAGTTCCCAGTCGGCCG...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCGGCCGACTGGGAACTaGTGGATGGCCAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCRPTGN*WMARGR
Trigger: TCTGCCCCTGGCCATCCACAAGTTCCCAGTCGGCCG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTGGTGCCCGGTGCACTaGGGGCTGCTGTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLWCPVH*GLLSVP
Trigger: GGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCA...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp CCCTGCATCACCCGAGCAGCTGTCCACGCCACCCTGTGGGAAGCCTaGACACAACATACGGCTGCTGATCTGCACTGGGTAGAAGCGGCG +
Preference number: 5 (lower is better)
Translates to: PCITRAAVHATLWEA*TQHTAADLHWVEAA
Trigger: CGCCGCTTCTACCCAGTGCAGATCAGCAGCCGTATGTTGTGTGCAGGCTTCCCACAGGGTGGCGTGGACAGCTGCTCGGGTGATGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGTTTGGCAAAGGTGTaGGGCGCCCAGCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPGLAKV*GAQLSG
Trigger: CCCTGAGAGCTGGGCGCCCAACACCTTTGCCAAACC...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGGTTTGGCAAAGGTGTaGGGCGCCCAGCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRGLAKV*GAQLSG
Trigger: CCCTGAGAGCTGGGCGCCCAACACCTTTGCCAAACC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp CTCTGCTATGTGCTCCACGTGGGCGCCCTGTGCGGAGAAGAAGGCTaGAAGGACTCCCAGGGTCACGATGGCCATGCTGATGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: LCYVLHVGALCGEEG*KDSQGHDGHADAHH
Trigger: GTGGTGGGCATCAGCATGGCCATCGTGACCCTGGGAGTCCTTTCAGCCTTCTTCTCCGCACAGGGCGCCCACGTGGAGCACATAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp ATCCTGCCAGCTGACCTCCAGGCAGGCTGCCAGCCGCAGTCGCACTaGGCCTCATCAGACTCGTCGGAGCAGTCCACTCTGTCATCACAC +
Preference number: 5 (lower is better)
Translates to: ILPADLQAGCQPQSH*ASSDSSEQSTLSSH
Trigger: GTGTGATGACAGAGTGGACTGCTCCGACGAGTCTGATGAGGCTCAGTGCGACTGCGGCTGGCAGCCTGCCTGGAGGTCAGCTGGCAGGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp ACCAGCCACCTGGCACCGATGATGGTGGCGCCACAGAAGTGTTCGTaGTTCTCTCGAAGACTGACCTGCCAGGGGAACTCCCCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TSHLAPMMVAPQKCS*FSRRLTCQGNSPGA
Trigger: GGCTCCCGGGGAGTTCCCCTGGCAGGTCAGTCTTCGAGAGAATCACGAACACTTCTGTGGCGCCACCATCATCGGTGCCAGGTGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp AGTCTACCTTCCCGTCCAGGTAGCCGGCACACACCATCCTGTCGGTaGGCGAGTGGCCGTACAGGCTGGAACACAGGCTCTGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SLPSRPGSRHTPSCR*ASGRTGWNTGSGPA
Trigger: TGCTGGACCAGAGCCTGTGTTCCAGCCTGTACGGCCACTCGCTCACCGACAGGATGGTGTGTGCCGGCTACCTGGACGGGAAGGTAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTAGCCAGGGAAAGACCTaGTTCCTGCAGCCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGSQGKT*FLQPCL
Trigger: CAGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCT...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTCCACTTTGGTGTGGTaGAAACAGTGGGCGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCSTLVW*KQWAAD
Trigger: GTCTGCCGCCCACTGTTTCAACCACACCAAAGTGGA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCAAGATGTCAGGCTaGGTGGCATTTCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSAWGGWPVAVFLSPRLGCKMSG*VAFPSC
Trigger: GCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCA...ACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp ATCTGGCAGGTGAGAGTGTATGGTGGTGCCCGGTGCACTTGGGGCTaGTGTCTGTCCCCTGGTGGTGGTACTCCTGGCAGACAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: IWQVRVYGGARCTWG*CLSPGGGTPGRQCC
Trigger: ACAACACTGTCTGCCAGGAGTACCACCACCAGGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCCTTGTTCCTGCAGCCTaGCCTGGATTCCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCLVPAA*PGFLSA
Trigger: TGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAG...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGTCCACTTTGGTGTGGTaGAAACAGTGGGCGGCAGAC +
Preference number: 5 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLSTLVW*KQWAAD
Trigger: GTCTGCCGCCCACTGTTTCAACCACACCAAAGTGGA...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTGCAAGATGTCAGGCTaGGTGGCATTTCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPCKMSG*VAFPSC
Trigger: GCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCTCAGTGAGGGAGAAGTaGTACAGGGCTCCACACATC +
Preference number: 5 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCSVREK*YRAPHI
Trigger: GATGTGTGGAGCCCTGTACAACTTCTCCCTCACTGA...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTGTTCCTGCAGCCTaGCCTGGATTCCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRLVPAA*PGFLSA
Trigger: TGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAG...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp TCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGTTGCACCGGTTGGATGTACTaGTTGAAGACCAATGGCTGG +
Preference number: 5 (lower is better)
Translates to: SAWGGWPVAVFLSPRLGCTGWMY*LKTNGW
Trigger: CCAGCCATTGGTCTTCAACAAGTACATCCAACCGGT...GCAACCCAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTTCAGTGAGGGAGAAGTaGTACAGGGCTCCACACATC +
Preference number: 5 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPSVREK*YRAPHI
Trigger: GATGTGTGGAGCCCTGTACAACTTCTCCCTCACTGA...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp GTCCCTCTCAGTCACCGGACCTTCACACCTTCCTGTCAGCTCGACTaGCACGATGGTGCCATAGGCAGCCAGGGAAAGACCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VPLSHRTFTPSCQLD*HDGAIGSQGKTLFL
Trigger: CAGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTCCGGTGACTGAGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp GATGTCAGGCTTGGTGGCATTTCCCTCCTGCATGTTGCCCCAGCCTaGGATCATACACTTCCGGCCGACTGGGAACTTGTGGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: DVRLGGISLLHVAPA*DHTLPADWELVDGQ
Trigger: CTGGCCATCCACAAGTTCCCAGTCGGCCGGAAGTGTATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp TCACCGGACCTTCACACCTTCCTGTCAGCTCGACTGACACGATGGTaGCATAGGCAGCCAGGGAAAGACCTTGTTCCTGCAGCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SPDLHTFLSARLTRW*HRQPGKDLVPAALP
Trigger: AGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTCCGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp ATAGTCCAGTGTGTAGATGTTGTAGAACGGGTGGCGATAGATGCGTaGCACGCGCTCCAACTGGCCCTCCGTGCTGCTCAGGAATGGGGT +
Preference number: 5 (lower is better)
Translates to: IVQCVDVVERVAIDA*HALQLALRAAQEWG
Trigger: ACCCCATTCCTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGCACGCATCTATCGCCACCCGTTCTACAACATCTACACACTGGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp CGTCATAGTCCAGTGTGTAGATGTTGTAGAACGGGTGGCGATAGATaGGTGCCACGCGCTCCAACTGGCCCTCCGTGCTGCTCAGGAATG +
Preference number: 5 (lower is better)
Translates to: RHSPVCRCCRTGGDR*VPRAPTGPPCCSGM
Trigger: CATTCCTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGCACGCATCTATCGCCACCCGTTCTACAACATCTACACACTGGACTATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp CAGTCACCGGACCTTCACACCTTCCTGTCAGCTCGACTGACACGATaGTGCCATAGGCAGCCAGGGAAAGACCTTGTTCCTGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QSPDLHTFLSARLTR*CHRQPGKDLVPAAL
Trigger: CAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTCCGGTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp CGGCCGACTGGGAACTTGTGGATGGCCAGGGGCAGACAAACCGGTTaGATGTACTTGTTGAAGACCAATGGCTGGGCTAACTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPTGNLWMARGRQTG*MYLLKTNGWANSSR
Trigger: CCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCACAAGTTCCCAGTCGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCACCGGTTGGATGTACTaGTTGAAGACCAATGGCTGG +
Preference number: 5 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRTGWMY*LKTNGW
Trigger: CCAGCCATTGGTCTTCAACAAGTACATCCAACCGGT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCGGGCAGACAAACCGGTaGGATGTACTTGTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRGQTNR*DVLVED
Trigger: GTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCC...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp AACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTGGGGCAGACAAACCGGTaGGATGTACTTGTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: NSSAWGGWPVAVFLSPRLGQTNR*DVLVED
Trigger: GTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCC...CAGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp ACTCGTCGGAGCAGTCCACTCTGTCATCACACTCCGGGTTCTCTTTaGTCACGCACTGACCATTCTGACAGGAGAAGACATTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: TRRSSPLCHHTPGSL*SRTDHSDRRRHSRG
Trigger: GCCCCGGGAATGTCTTCTCCTGTCAGAATGGTCAGTGCGTGAGCAAAGAGAACCCGGAGTGTGATGACAGAGTGGACTGCTCCGACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp AGGGCTCCACACATCTTCTGCTCTATGATGCCCACGGACGCCTTCTaGAAGATGTCAGGCTTGGTGGCATTTCCCTCCTGCATGTTGCCC +
Preference number: 5 (lower is better)
Translates to: RAPHIFCSMMPTDAF*KMSGLVAFPSCMLP
Trigger: GGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp ACCCTGTGGGAAGCCTGCACACAACATACGGCTGCTGATCTGCACTaGGTAGAAGCGGCGACATGTCTGTTCACTGAGGACCCTTACTGC +
Preference number: 5 (lower is better)
Translates to: TLWEACTQHTAADLH*VEAATCLFTEDPYC
Trigger: GCAGTAAGGGTCCTCAGTGAACAGACATGTCGCCGCTTCTACCCAGTGCAGATCAGCAGCCGTATGTTGTGTGCAGGCTTCCCACAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp CAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCCTATACAGAGACAGCCTTaGTCACCTCTGGCACAAGTT +
Preference number: 5 (lower is better)
Translates to: QLLSVGWVARSCVSQSTPIQRQP*SPLAQV
Trigger: AACTTGTGCCAGAGGTGACAAAGGCTGTCTCTGTAT...AGGCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS-3UTR CAA 90 bp ACCAACTCCTCAGCGTGGGGTGGGTGGCCCGTAGCTGTGTTTCTCAGTCCACGCATACAGAGACAGCCTTaGTCACCTCTGGCACAAGTT +
Preference number: 5 (lower is better)
Translates to: TNSSAWGGWPVAVFLSPRIQRQP*SPLAQV
Trigger: AACTTGTGCCAGAGGTGACAAAGGCTGTCTCTGTAT...GCGTGGACTGAGAAACACAGCTACGGGCCACCCACCCCACGCTGAGGAGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp CCTTCTGCAAGATGTCAGGCTTGGTGGCATTTCCCTCCTGCATGTTaGCCCAGCCTGAGATCATACACTTCCGGCCGACTGGGAACTTGT +
Preference number: 5 (lower is better)
Translates to: PSARCQAWWHFPPAC*PSLRSYTSGRLGTC
Trigger: ACAAGTTCCCAGTCGGCCGGAAGTGTATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp ACTTGTGGATGGCCAGGGGCAGACAAACCGGTTGGATGTACTTGTTaGAGACCAATGGCTGGGCTAACTCCAGCAGGGCCACGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: TCGWPGADKPVGCTC*RPMAGLTPAGPRQS
Trigger: ACTTTGACGTGGCCCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp GATGGTGCCATAGGCAGCCAGGGAAAGACCTTGTTCCTGCAGCCTTaGCTGGATTCCTTTCTGCAAGATGTCTGCTTCCTGCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: DGAIGSQGKTLFLQP*LDSFLQDVCFLLQA
Trigger: AGCCTGAAGCAGGAAGCAGACATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 90 bp ATGCGGTCAGTGAGGGAGAAGTTGTACAGGGCTCCACACATCTTCTaGTCTATGATGCCCACGGACGCCTTCTGCAAGATGTCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: MRSVREKLYRAPHIF*SMMPTDAFCKMSGL
Trigger: CAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGCCCTGTACAACTTCTCCCTCACTGACCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp CTAAGCACGGTGCAGCCTGCGCAGCTCGACTCTAACTCTGTTTTCTaGAAACTACTCACAAACAGTGTCTGCAGAGCATGCGTGAGTAGG +
Preference number: 5 (lower is better)
Translates to: LSTVQPAQLDSNSVF*KLLTNSVCRACVSR
Trigger: CCTACTCACGCATGCTCTGCAGACACTGTTTGTGAGTAGTTTCCAGAAAACAGAGTTAGAGTCGAGCTGCGCAGGCTGCACCGTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 90 bp ATTCCTTTCTGCAAGATGTCTGCTTCCTGCTTCAGGCTCAGGGGCTaGAGGGCTCGGAGCAGAAAGTGTAGCCGGAAATGTACAATCACA +
Preference number: 5 (lower is better)
Translates to: IPFCKMSASCFRLRG*RARSRKCSRKCTIT
Trigger: TGTGATTGTACATTTCCGGCTACACTTTCTGCTCCGAGCCCTCCAGCCCCTGAGCCTGAAGCAGGAAGCAGACATCTTGCAGAAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 90 bp CTGTTTTCTGGAAACTACTCACAAACAGTGTCTGCAGAGCATGCGTaGGTAGGCGGTAGAAGTCAGAGTTCTCCTGCTGCAAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: LFSGNYSQTVSAEHA*VGGRSQSSPAAKNW
Trigger: CCAGTTCTTTGCAGCAGGAGAACTCTGACTTCTACCGCCTACTCACGCATGCTCTGCAGACACTGTTTGTGAGTAGTTTCCAGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CGTGTGCGCACAGCGCTGGCCTCTGACCCGCTCAGGTaGACACTGCCCGCCTGGGCGGCCCACTGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: RVRTALASDPLR*TLPAWAAHCAG
Trigger: CCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCACCTGAGCGGGTCAGAGGCCAGCGCTGTGCGCACACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CGGGACCTGGTAGGCAGATGGGTCGCACCAAGCGGCTaGGGCGCACGGGTCCCGCCAGCTCCAGCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: RDLVGRWVAPSG*GARVPPAPAVP
Trigger: TGGCACTGCTGGAGCTGGCGGGACCCGTGCGCCGCAGCCGCTTGGTGCGACCCATCTGCCTACCAGGTCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GCTGGTAGGCCAGGGAGTGCTGGGGGTGGCGGGCGCTaGAGTCGCGGTGGGGACCACAGGCATGTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: AGRPGSAGGGGR*SRGGDHRHVSS
Trigger: GCTGCTGACATGCCTGTGGTCCCCACCGCGACTCCAGCGCCCGCCACCCCCAGCACTCCCTGGCCTACCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 90 bp TGCAGTGGCACAGGGCTGGGGGCAGCGGTGGGTTTGGCAAAGGTGTaGGGCGCCCAGCTCTCAGGGCTGGTAGGCCAGGGAGTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CSGTGLGAAVGLAKV*GAQLSGLVGQGVLG
Trigger: CCCCAGCACTCCCTGGCCTACCAGCCCTGAGAGCTGGGCGCCCAACACCTTTGCCAAACCCACCGCTGCCCCCAGCCCTGTGCCACTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp AGCCACCTCTCGGCCACCAGTACCGCCCCACATCGGTaGTCCCTGCGCCGCAGCCACAGGCTCACTTGCCAG +
Preference number: 6 (lower is better)
Translates to: SHLSATSTAPHR*SLRRSHRLTCQ
Trigger: CTGGCAAGTGAGCCTGTGGCTGCGGCGCAGGGAGCACCGATGTGGGGCGGTACTGGTGGCCGAGAGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCGCTCAGGTGCACACTGCCCGCCTGGGCGGCCCACTaGGCAGGGTCCTGGAATTCGTTGAAGCAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: PLRCTLPAWAAH*AGSWNSLKQWA
Trigger: TGCCCACTGCTTCAACGAATTCCAGGACCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCACCTGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp GATAGATGCGTGCCACGCGCTCCAACTGGCCCTCCGTaGTGCTCAGGAATGGGGTGCCCAGGAAGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: DRCVPRAPTGPP*CSGMGCPGRPP
Trigger: GGGCGGCCTTCCTGGGCACCCCATTCCTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGCACGCATCTATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp TGTTCACTGAGGACCCTTACTGCGGCCTTCTGCAGCTaGCGCGCCATGGAGCCTCCCTCGCGCAGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: CSLRTLTAAFCS*RAMEPPSRSEP
Trigger: GGGCTCGCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp TGCTGGGGTGCAGTGGCACAGGGCTGGGGGCAGCGGTaGGTTTGGCAAAGGTGTTGGGCGCCCAGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: CWGAVAQGWGQR*VWQRCWAPSSQ
Trigger: CTGAGAGCTGGGCGCCCAACACCTTTGCCAAACCCACCGCTGCCCCCAGCCCTGTGCCACTGCACCCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp CCTGGGCGGCCCACTGCGCAGGGTCCTGGAATTCGTTaGAGCAGTGGGCAGCAGACACCAGCCACCTGGCAC +
Preference number: 6 (lower is better)
Translates to: PGRPTAQGPGIR*SSGQQTPATWH
Trigger: GTGCCAGGTGGCTGGTGTCTGCTGCCCACTGCTTCAACGAATTCCAGGACCCTGCGCAGTGGGCCGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp AGATCAGACACTTCTTGCCCGGCGGGAAGACGTGCGTaGCCGCGGGGAGGCAGGCAGGCTGCACATAGCGTC +
Preference number: 6 (lower is better)
Translates to: RSDTSCPAGRRA*PRGGRQAAHSV
Trigger: GACGCTATGTGCAGCCTGCCTGCCTCCCCGCGGCCACGCACGTCTTCCCGCCGGGCAAGAAGTGTCTGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GGGCTTGTCCATGGCGGGTCTGGCCCCACACTCTTGTaGCTTGGCCGTAGTGCTGGGGTGCAGTGGCACAGG +
Preference number: 6 (lower is better)
Translates to: GLVHGGSGPTLL*LGRSAGVQWHR
Trigger: CCTGTGCCACTGCACCCCAGCACTACGGCCAAGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp GACACGGCGCTGATCCCGCCCACAATCCGAGTGGGCTaGTCCATGGCGGGTCTGGCCCCACACTCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: DTALIPPTIRVG*SMAGLAPHSCG
Trigger: GCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAAGCCCACTCGGATTGTGGGCGGGATCAGCGCCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 90 bp ACCTCCCCAGACACGGCGCTGATCCCGCCCACAATCCGAGTGGGCTaGTCCATGGCGGGTCTGGCCCCACACTCTTGTGGCTTGGCCGTA +
Preference number: 6 (lower is better)
Translates to: TSPDTALIPPTIRVG*SMAGLAPHSCGLAV
Trigger: TACGGCCAAGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAAGCCCACTCGGATTGTGGGCGGGATCAGCGCCGTGTCTGGGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp GCTGACCTCCAGGCAGGCTGCCAGCCGCAGTCGCACTaGGCCTCATCAGACTCGTCGGAGCAGTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: ADLQAGCQPQSH*ASSDSSEQSTL
Trigger: CAGAGTGGACTGCTCCGACGAGTCTGATGAGGCTCAGTGCGACTGCGGCTGGCAGCCTGCCTGGAGGTCAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CATAGGCAGGATGCTTGGCTATGCGGAGCACGCGTGTaGGCACAGCGCTGGCCTCTGACCCGCTCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: HRQDAWLCGARV*AQRWPLTRSGA
Trigger: TGCACCTGAGCGGGTCAGAGGCCAGCGCTGTGCGCACACGCGTGCTCCGCATAGCCAAGCATCCTGCCTATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCCAGCAGGGACACGGTGCCCAGGTGCGCCTGCACCTaGTCCACTTTGGTGTGGTTGAAACAGTGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PSRDTVPRCACT*STLVWLKQWAA
Trigger: TGCCGCCCACTGTTTCAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CATGTCTGTTCACTGAGGACCCTTACTGCGGCCTTCTaGAGCTGCCGCGCCATGGAGCCTCCCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: HVCSLRTLTAAF*SCRAMEPPSRS
Trigger: GCTGCGCGAGGGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp AGCGGTCACCCACCACGGTGGCTCCGCAGAAATGTCTaGGTCCTTCCTTCAGGCTGGCCTGCCAGGGCACCT +
Preference number: 6 (lower is better)
Translates to: SGHPPRWLRRNV*VLPSGWPARAP
Trigger: AGGTGCCCTGGCAGGCCAGCCTGAAGGAAGGACCCAGACATTTCTGCGGAGCCACCGTGGTGGGTGACCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp CCATCCCAGCACAGCAGCCACTCGAGTGTAGACACCTaGGAAGTGGGGCCTGCCACAGCCGTAGCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: PSQHSSHSSVDT*EVGPATAVAPA
Trigger: AGCTGGGGCTACGGCTGTGGCAGGCCCCACTTCCCAGGTGTCTACACTCGAGTGGCTGCTGTGCTGGGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp TTGTCCATGGCGGGTCTGGCCCCACACTCTTGTGGCTaGGCCGTAGTGCTGGGGTGCAGTGGCACAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LSMAGLAPHSCG*AVVLGCSGTGL
Trigger: CAGCCCTGTGCCACTGCACCCCAGCACTACGGCCAAGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp AGTGGGCTTGTCCATGGCGGGTCTGGCCCCACACTCTaGTGGCTTGGCCGTAGTGCTGGGGTGCAGTGGCAC +
Preference number: 6 (lower is better)
Translates to: SGLVHGGSGPTL*WLGRSAGVQWH
Trigger: GTGCCACTGCACCCCAGCACTACGGCCAAGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAAGCCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp TCCCGTCCAGGTAGCCGGCACACACCATCCTGTCGGTaGGCGAGTGGCCGTACAGGCTGGAACACAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SRPGSRHTPSCR*ASGRTGWNTGS
Trigger: AGAGCCTGTGTTCCAGCCTGTACGGCCACTCGCTCACCGACAGGATGGTGTGTGCCGGCTACCTGGACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp TCCCAGGGTCACGATGGCCATGCTGATGCCCACCACTaGGATGACAGCCGTTCGACAAGGGCCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SQGHDGHADAHH*DDSRSTRARVW
Trigger: CCAGACCCTGGCCCTTGTCGAACGGCTGTCATCGCAGTGGTGGGCATCAGCATGGCCATCGTGACCCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCGACACCCAGCAGGGACACGGTGCCCAGGTGCGCCTaGACCTGCTCCACTTTGGTGTGGTTGAAACAGTGG +
Preference number: 6 (lower is better)
Translates to: PTPSRDTVPRCA*TCSTLVWLKQW
Trigger: CCACTGTTTCAACCACACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGGGTGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCAGGCCACAATCTGGCAGGTGAGAGTGTATGGTGGTaGCCGGTGCACTTGGGGCTGCTGTCTGTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PGHNLAGESVWW*PVHLGLLSVPW
Trigger: CCAGGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGATTGTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp GAAGCGGCGACATGTCTGTTCACTGAGGACCCTTACTaGGGCCTTCTGCAGCTGCCGCGCCATGGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: EAATCLFTEDPY*GLLQLPRHGAS
Trigger: GGAGGCTCCATGGCGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATGTCGCCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GCCTGCACCTGCTCCACTTTGGTGTGGTTGAAACAGTaGGCGGCAGACAGCAGCCAGCGGTCACCCACCACG +
Preference number: 6 (lower is better)
Translates to: ACTCSTLVWLKQ*AADSSQRSPTT
Trigger: CGTGGTGGGTGACCGCTGGCTGCTGTCTGCCGCCCACTGTTTCAACCACACCAAAGTGGAGCAGGTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GCCGTGTGCTGGAGGTGTGGGGGCGAGCCATGGAGCTaGGGTCTGAGGACATCGCTTTCAGGATCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: AVCWRCGGEPWS*GLRTSLSGSSP
Trigger: AGGACTGGATCCTGAAAGCGATGTCCTCAGACCCCAGCTCCATGGCTCGCCCCCACACCTCCAGCACACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GTGCCAGGCCACAATCTGGCAGGTGAGAGTGTATGGTaGTGCCCGGTGCACTTGGGGCTGCTGTCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: VPGHNLAGESVW*CPVHLGLLSVP
Trigger: GGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGATTGTGGCCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GGGGTGCCAGGCCACAATCTGGCAGGTGAGAGTGTATaGTGGTGCCCGGTGCACTTGGGGCTGCTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: GVPGHNLAGESV*WCPVHLGLLSV
Trigger: GACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGATTGTGGCCTGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp CTGGCAGGTGAGAGTGTATGGTGGTGCCCGGTGCACTaGGGGCTGCTGTCTGTCCCCTGGTGGTGGTACTCC +
Preference number: 6 (lower is better)
Translates to: LAGESVWWCPVH*GLLSVPWWWYS
Trigger: GGAGTACCACCACCAGGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp GTGCTCCACGTGGGCGCCCTGTGCGGAGAAGAAGGCTaGAAGGACTCCCAGGGTCACGATGGCCATGCTGAT +
Preference number: 6 (lower is better)
Translates to: VLHVGALCGEEG*KDSQGHDGHAD
Trigger: ATCAGCATGGCCATCGTGACCCTGGGAGTCCTTTCAGCCTTCTTCTCCGCACAGGGCGCCCACGTGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp TGGCGCCACAGAAGTGTTCGTGATTCTCTCGAAGACTaGCCTGCCAGGGGAACTCCCCGGGAGCCGCCTCCA +
Preference number: 6 (lower is better)
Translates to: WRHRSVRDSLED*PARGTPREPPP
Trigger: TGGAGGCGGCTCCCGGGGAGTTCCCCTGGCAGGTCAGTCTTCGAGAGAATCACGAACACTTCTGTGGCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp GCGGCTGCGGCGCACGGGTCCCGCCAGCTCCAGCAGTaGCACGTCATAGTCCAGTGTGTAGATGTTGTAGAA +
Preference number: 6 (lower is better)
Translates to: AAAAHGSRQLQQ*HVIVQCVDVVE
Trigger: TTCTACAACATCTACACACTGGACTATGACGTGGCACTGCTGGAGCTGGCGGGACCCGTGCGCCGCAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp TCTGCACTGGGTAGAAGCGGCGACATGTCTGTTCACTaGGGACCCTTACTGCGGCCTTCTGCAGCTGCCGCG +
Preference number: 6 (lower is better)
Translates to: SALGRSGDMSVH*GPLLRPSAAAA
Trigger: CGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATGTCGCCGCTTCTACCCAGTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp ACAATCTGGCAGGTGAGAGTGTATGGTGGTGCCCGGTaGACTTGGGGCTGCTGTCTGTCCCCTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: TIWQVRVYGGAR*TWGCCLSPGGG
Trigger: ACCACCACCAGGGGACAGACAGCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCAGTGTGTAGATGTTGTAGAACGGGTGGCGATAGATaGGTGCCACGCGCTCCAACTGGCCCTCCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: PVCRCCRTGGDR*VPRAPTGPPCC
Trigger: GCAGCACGGAGGGCCAGTTGGAGCGCGTGGCACGCATCTATCGCCACCCGTTCTACAACATCTACACACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp TGTGTAGATGTTGTAGAACGGGTGGCGATAGATGCGTaGCACGCGCTCCAACTGGCCCTCCGTGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: CVDVVERVAIDA*HALQLALRAAQ
Trigger: CTGAGCAGCACGGAGGGCCAGTTGGAGCGCGTGGCACGCATCTATCGCCACCCGTTCTACAACATCTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp TGCCCACGGACGCCTTCTGCAAGATGTCAGGCTTGGTaGCATTTCCCTCCTGCATGTTGCCCCAGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: CPRTPSARCQAW*HFPPACCPSLR
Trigger: TCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp AGTCACCGGACCTTCACACCTTCCTGTCAGCTCGACTaGCACGATGGTGCCATAGGCAGCCAGGGAAAGACC +
Preference number: 6 (lower is better)
Translates to: SHRTFTPSCQLD*HDGAIGSQGKT
Trigger: GGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTCCGGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp CTGGCACCGATGATGGTGGCGCCACAGAAGTGTTCGTaGTTCTCTCGAAGACTGACCTGCCAGGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LAPMMVAPQKCS*FSRRLTCQGNS
Trigger: GGAGTTCCCCTGGCAGGTCAGTCTTCGAGAGAATCACGAACACTTCTGTGGCGCCACCATCATCGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CTGCATAGGGTCCCCATAGATGTCGAAACAGTGTGCTaGAGACAGAAGCCACCTCTCGGCCACCAGTACCGC +
Preference number: 6 (lower is better)
Translates to: LHRVPIDVETVC*RQKPPLGHQYR
Trigger: GCGGTACTGGTGGCCGAGAGGTGGCTTCTGTCTGCAGCACACTGTTTCGACATCTATGGGGACCCTATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp CACTGCGATGACAGCCGTTCGACAAGGGCCAGGGTCTaGAGCAGATACAGAGACAGCCTTTGTCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: HCDDSRSTRARV*SRYRDSLCHLW
Trigger: CCAGAGGTGACAAAGGCTGTCTCTGTATCTGCTCCAGACCCTGGCCCTTGTCGAACGGCTGTCATCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp ATGATGCCCACGGACGCCTTCTGCAAGATGTCAGGCTaGGTGGCATTTCCCTCCTGCATGTTGCCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: MMPTDAFCKMSG*VAFPSCMLPQP
Trigger: AGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp TGGCCAGGGGCAGACAAACCGGTTGGATGTACTTGTTaGAGACCAATGGCTGGGCTAACTCCAGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: WPGADKPVGCTC*RPMAGLTPAGP
Trigger: TGGCCCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp CACCCTGTGGGAAGCCTGCACACAACATACGGCTGCTaGTCTGCACTGGGTAGAAGCGGCGACATGTCTGTT +
Preference number: 6 (lower is better)
Translates to: HPVGSLHTTYGC*SALGRSGDMSV
Trigger: AACAGACATGTCGCCGCTTCTACCCAGTGCAGATCAGCAGCCGTATGTTGTGTGCAGGCTTCCCACAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp AGATGTCAGGCTTGGTGGCATTTCCCTCCTGCATGTTaGCCCAGCCTGAGATCATACACTTCCGGCCGACTG +
Preference number: 6 (lower is better)
Translates to: RCQAWWHFPPAC*PSLRSYTSGRL
Trigger: CAGTCGGCCGGAAGTGTATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CCACTGCATAGGGTCCCCATAGATGTCGAAACAGTGTaGTGCAGACAGAAGCCACCTCTCGGCCACCAGTAC +
Preference number: 6 (lower is better)
Translates to: PLHRVPIDVETV*CRQKPPLGHQY
Trigger: GTACTGGTGGCCGAGAGGTGGCTTCTGTCTGCAGCACACTGTTTCGACATCTATGGGGACCCTATGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp CCTGAGATCATACACTTCCGGCCGACTGGGAACTTGTaGATGGCCAGGGGCAGACAAACCGGTTGGATGTAC +
Preference number: 6 (lower is better)
Translates to: PEIIHFRPTGNL*MARGRQTGWMY
Trigger: GTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCACAAGTTCCCAGTCGGCCGGAAGTGTATGATCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp AGACCTTGTTCCTGCAGCCTTGCCTGGATTCCTTTCTaGAAGATGTCTGCTTCCTGCTTCAGGCTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: RPCSCSLAWIPF*KMSASCFRLRG
Trigger: GCCCCTGAGCCTGAAGCAGGAAGCAGACATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CTTCACACCTTCCTGTCAGCTCGACTGACACGATGGTaGCATAGGCAGCCAGGGAAAGACCTTGTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: LHTFLSARLTRW*HRQPGKDLVPA
Trigger: TGCAGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp CACATCTTCTGCTCTATGATGCCCACGGACGCCTTCTaGAAGATGTCAGGCTTGGTGGCATTTCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: HIFCSMMPTDAF*KMSGLVAFPSC
Trigger: GCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GACCTTCACACCTTCCTGTCAGCTCGACTGACACGATaGTGCCATAGGCAGCCAGGGAAAGACCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: DLHTFLSARLTR*CHRQPGKDLVP
Trigger: AGGAACAAGGTCTTTCCCTGGCTGCCTATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GAAGCCTGCACACAACATACGGCTGCTGATCTGCACTaGGTAGAAGCGGCGACATGTCTGTTCACTGAGGAC +
Preference number: 6 (lower is better)
Translates to: EACTQHTAADLH*VEAATCLFTED
Trigger: GTCCTCAGTGAACAGACATGTCGCCGCTTCTACCCAGTGCAGATCAGCAGCCGTATGTTGTGTGCAGGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp TGGATGGCCAGGGGCAGACAAACCGGTTGGATGTACTaGTTGAAGACCAATGGCTGGGCTAACTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: WMARGRQTGWMY*LKTNGWANSSR
Trigger: CCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 90 bp TTCTGCTCTATGATGCCCACGGACGCCTTCTGCAAGATGTCAGGCTaGGTGGCATTTCCCTCCTGCATGTTGCCCCAGCCTGAGATCATA +
Preference number: 6 (lower is better)
Translates to: FCSMMPTDAFCKMSG*VAFPSCMLPQPEII
Trigger: TATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp TTCTGCAAGATGTCAGGCTTGGTGGCATTTCCCTCCTaGATGTTGCCCCAGCCTGAGATCATACACTTCCGG +
Preference number: 6 (lower is better)
Translates to: FCKMSGLVAFPS*MLPQPEIIHFR
Trigger: CCGGAAGTGTATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAAGCCTGACATCTTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp GTGAGGGAGAAGTTGTACAGGGCTCCACACATCTTCTaGTCTATGATGCCCACGGACGCCTTCTGCAAGATG +
Preference number: 6 (lower is better)
Translates to: VREKLYRAPHIF*SMMPTDAFCKM
Trigger: CATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGCCCTGTACAACTTCTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp CAAACCGGTTGGATGTACTTGTTGAAGACCAATGGCTaGGCTAACTCCAGCAGGGCCACGTCAAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QTGWMYLLKTNG*ANSSRATSKSR
Trigger: CCTGGACTTTGACGTGGCCCTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp GGGAACTTGTGGATGGCCAGGGGCAGACAAACCGGTTaGATGTACTTGTTGAAGACCAATGGCTGGGCTAAC +
Preference number: 6 (lower is better)
Translates to: GNLWMARGRQTG*MYLLKTNGWAN
Trigger: GTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCACAAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CCA 72 bp AGATCATACACTTCCGGCCGACTGGGAACTTGTGGATaGCCAGGGGCAGACAAACCGGTTGGATGTACTTGT +
Preference number: 6 (lower is better)
Translates to: RSYTSGRLGTCG*PGADKPVGCTC
Trigger: ACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCCACAAGTTCCCAGTCGGCCGGAAGTGTATGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp AAGGGCCAGGGTCTGGAGCAGATACAGAGACAGCCTTaGTCACCTCTGGCACAAGTTGTAAGTCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: KGQGLEQIQRQP*SPLAQVVSLVQ
Trigger: CTGCACCAGACTTACAACTTGTGCCAGAGGTGACAAAGGCTGTCTCTGTATCTGCTCCAGACCCTGGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp AGAAGTTGTACAGGGCTCCACACATCTTCTGCTCTATaGTGCCCACGGACGCCTTCTGCAAGATGTCAGGCT +
Preference number: 6 (lower is better)
Translates to: RSCTGLHTSSAL*CPRTPSARCQA
Trigger: AGCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGCCCTGTACAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp ATAGGCAGCCAGGGAAAGACCTTGTTCCTGCAGCCTTaGCTGGATTCCTTTCTGCAAGATGTCTGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: IGSQGKTLFLQP*LDSFLQDVCFL
Trigger: CAGGAAGCAGACATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS CAA 72 bp CATAGGCAGCCAGGGAAAGACCTTGTTCCTGCAGCCTaGCCTGGATTCCTTTCTGCAAGATGTCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: HRQPGKDLVPAA*PGFLSARCLLP
Trigger: AGGAAGCAGACATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp GGAAACTACTCACAAACAGTGTCTGCAGAGCATGCGTaGGTAGGCGGTAGAAGTCAGAGTTCTCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GNYSQTVSAEHA*VGGRSQSSPAA
Trigger: TGCAGCAGGAGAACTCTGACTTCTACCGCCTACTCACGCATGCTCTGCAGACACTGTTTGTGAGTAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS GCA 72 bp AGCAGTCCACTCTGTCATCACACTCCGGGTTCTCTTTaGTCACGCACTGACCATTCTGACAGGAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: SSPLCHHTPGSL*SRTDHSDRRRH
Trigger: ATGTCTTCTCCTGTCAGAATGGTCAGTGCGTGAGCAAAGAGAACCCGGAGTGTGATGACAGAGTGGACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2
CDS TCA 72 bp GGTAGAAGTCAGAGTTCTCCTGCTGCAAAGAACTGGTaGAACGGATCCCATGTAGCTCTGCTATGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: GRSQSSPAAKNW*NGSHVALLCAP
Trigger: TGGAGCACATAGCAGAGCTACATGGGATCCGTTTCACCAGTTCTTTGCAGCAGGAGAACTCTGACTTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105333.3
ENSMUST00000219817.2