Pregenerated sensors for TMPRSS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033177Ensembl transcript IDs: ENSMUST00000114562.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCATCCTCGCAGTCCCGGAAGCCATCACAGACCAGAGGGCCATGCTaGCGGAAGCTGCTGCTGTTGCAGGCAGGTTTTACAGTCACACAG | + |
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Preference number: 5 (lower is better) Translates to: PSSQSRKPSQTRGPC*RKLLLLQAGFTVTQ Trigger: CTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTTCCGGGACTGCGAGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | CTGAAAGCCTGGAACTGCATTGGAGCTGGATGTGGACCAGGGGGCTaGGCACCCGGAAAATGGTCTCATGATCCATGTAGGAGCCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LKAWNCIGAGCGPGG*APGKWSHDPCRSRS Trigger: ACTGCGGCTCCTACATGGATCATGAGACCATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | TCCCCACTGCGCACTTTCTGGCCCGCTGGAGGAATGCATATTGGTTaGATGAGCTGTTTCAGGGTTTCAGGCCAGGCTATGCTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SPLRTFWPAGGMHIG*MSCFRVSGQAMLSC Trigger: GCAGCTCAGCATAGCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | AACCGCCATATTCTACCAAGAGTGGCTTGTCTGAAAGCCTGGAACTaGATTGGAGCTGGATGTGGACCAGGGGGCTGGGCACCCGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: NRHILPRVACLKAWN*IGAGCGPGGWAPGK Trigger: TTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGGCGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | CCCGGAAGCCATCACAGACCAGAGGGCCATGCTGCCGGAAGCTGCTaGTGTTGCAGGCAGGTTTTACAGTCACACAGAAAAGTTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: PGSHHRPEGHAAGSC*CCRQVLQSHRKVHH Trigger: GTGATGAACTTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTTCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | CCATATTCTACCAAGAGTGGCTTGTCTGAAAGCCTGGAACTGCATTaGAGCTGGATGTGGACCAGGGGGCTGGGCACCCGGAAAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: PYSTKSGLSESLELH*SWMWTRGLGTRKMV Trigger: GACCATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | TGTTGTAACCGCCATATTCTACCAAGAGTGGCTTGTCTGAAAGCCTaGAACTGCATTGGAGCTGGATGTGGACCAGGGGGCTGGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: CCNRHILPRVACLKA*NCIGAGCGPGGWAP Trigger: GGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGGCGGTTACAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | GCCAGTCACCCAGCACTTCTCCCCACTGCGCACTTTCTGGCCCGCTaGAGGAATGCATATTGGTTGAATGAGCTGTTTCAGGGTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASHPALLPTAHFLAR*RNAYWLNELFQGFR Trigger: CCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGTGGGGAGAAGTGCTGGGTGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | AGTCCCGGAAGCCATCACAGACCAGAGGGCCATGCTGCCGGAAGCTaGTGCTGTTGCAGGCAGGTTTTACAGTCACACAGAAAAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SPGSHHRPEGHAAGS*CCCRQVLQSHRKVH Trigger: ATGAACTTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTTCCGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | CTTCTCCCCACTGCGCACTTTCTGGCCCGCTGGAGGAATGCATATTaGTTGAATGAGCTGTTTCAGGGTTTCAGGCCAGGCTATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLPTAHFLARWRNAY*LNELFQGFRPGYAE Trigger: CTCAGCATAGCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGTGGGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | TCACTTTCGTCGAAACAGTCATTCACTCCGTCACAACGCTGGGCCTaGGGGACACACAAACCGGAGGAGCACCTAAAAGATCCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLSSKQSFTPSQRWA*GTHKPEEHLKDPAG Trigger: TCCTGCAGGATCTTTTAGGTGCTCCTCCGGTTTGTGTGTCCCTCAGGCCCAGCGTTGTGACGGAGTGAATGACTGTTTCGACGAAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | CGAGGTGGTCTTCTCCCTGGTAGCTTCCCTGGGACACTGACCACCTaGATGGAGATGTTGGATATTTTGAGGTCTGAGGACTTGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RGGLLPGSFPGTLTT*MEMLDILRSEDLQE Trigger: TTCCTGCAAGTCCTCAGACCTCAAAATATCCAACATCTCCATCCAGGTGGTCAGTGTCCCAGGGAAGCTACCAGGGAGAAGACCACCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | AGACCCTGCAAGCTCCCCACAGAAGTGCGGTTTATGATACTGGTTTaGATGGAGTCCTTCAAGATGGCCGCCACACACTCCTCACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RPCKLPTEVRFMILV*MESFKMAATHSSQK Trigger: CTTCTGTGAGGAGTGTGTGGCGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTTGCAGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | TATCCACAGCCAGACCCTGCAAGCTCCCCACAGAAGTGCGGTTTATaGTACTGGTTTGAATGGAGTCCTTCAAGATGGCCGCCACACACT | + |
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Preference number: 5 (lower is better) Translates to: YPQPDPASSPQKCGL*YWFEWSPSRWPPHT Trigger: AGTGTGTGGCGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTTGCAGGGTCTGGCTGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | ACTGGAGAGATAAACTTGGCATTCCCCTGCACATACATCCCAAGGTaGGCAGTCCATGGCGTGGGGTCAGACAGCCTGTTTCCATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: TGEINLAFPCTYIPR*AVHGVGSDSLFPWK Trigger: TTTCCATGGAAACAGGCTGTCTGACCCCACGCCATGGACTGCTCACCTTGGGATGTATGTGCAGGGGAATGCCAAGTTTATCTCTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | AGCCATCACAGACCAGAGGGCCATGCTGCCGGAAGCTGCTGCTGTTaGAGGCAGGTTTTACAGTCACACAGAAAAGTTCATCACTTTCGT | + |
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Preference number: 5 (lower is better) Translates to: SHHRPEGHAAGSCCC*RQVLQSHRKVHHFR Trigger: ACGAAAGTGATGAACTTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | TTGACTGATGTTGTAACCGCCATATTCTACCAAGAGTGGCTTGTCTaGAAGCCTGGAACTGCATTGGAGCTGGATGTGGACCAGGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LTDVVTAIFYQEWLV*KPGTALELDVDQGA Trigger: AGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGGCGGTTACAACATCAGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | ATGGAGTCCTTCAAGATGGCCGCCACACACTCCTCACAGAAGATGTaGCCCTTGGCATGTGGCATAACAAACACAATCCAAAAGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: MESFKMAATHSSQKM*PLACGITNTIQKWT Trigger: GGTCCACTTTTGGATTGTGTTTGTTATGCCACATGCCAAGGGCCACATCTTCTGTGAGGAGTGTGTGGCGGCCATCTTGAAGGACTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | CACTCCGGATTGGCAAGAGGGAGTCATAAACAGTCAGGGAGTCGGTaGTACAGTTGTCGGCTTCCAATTGGATGGATTCAATGGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: HSGLARGSHKQSGSR*YSCRLPIGWIQWRD Trigger: GTCTCTCCATTGAATCCATCCAATTGGAAGCCGACAACTGTATCACCGACTCCCTGACTGTTTATGACTCCCTCTTGCCAATCCGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | AAGATGTGGCCCTTGGCATGTGGCATAACAAACACAATCCAAAAGTaGACCAGGAGACCGCCTTTGTTGTTACTGCTGACGTCTGCAACC | + |
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Preference number: 5 (lower is better) Translates to: KMWPLACGITNTIQK*TRRPPLLLLLTSAT Trigger: GGTTGCAGACGTCAGCAGTAACAACAAAGGCGGTCTCCTGGTCCACTTTTGGATTGTGTTTGTTATGCCACATGCCAAGGGCCACATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | AATCCATTTTCCATCACTCTTTCTTCGACAAGACAAAGGTCCTCCTaGATCTCCTTTGCAGGCGTCGCTCTTGCCAGACATAACCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: NPFSITLSSTRQRSS*ISFAGVALARHNPC Trigger: GCAGGGGTTATGTCTGGCAAGAGCGACGCCTGCAAAGGAGATTCAGGAGGACCTTTGTCTTGTCGAAGAAAGAGTGATGGAAAATGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | CCTGAAGCAAATGTCATTGCCACATTTAAAGGTCCTACTGGTGCATaGGATGCTTCTAGTGCAGTTTTGCTCGTCCTGACCATCCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: PEANVIATFKGPTGA*DASSAVLLVLTILA Trigger: TGCGAGGATGGTCAGGACGAGCAAAACTGCACTAGAAGCATCCCATGCACCAGTAGGACCTTTAAATGTGGCAATGACATTTGCTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | ATTCAATGGAGAGACGAATCAGATAACCCACGATGGCCACCAACTTaGAGTGACACATTAGTTGTCCCGAGGTTGCGGAAATCTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: IQWRDESDNPRWPPT*SDTLVVPRLRKSPE Trigger: CTCTGGAGATTTCCGCAACCTCGGGACAACTAATGTGTCACTTCAAGTTGGTGGCCATCGTGGGTTATCTGATTCGTCTCTCCATTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | TGCTGTACTGTCTTTGCCATGGAGAGAAATTCCCTAGACTCCTTCTaGCGGTACTCAGGAAGGAACTCAATGTTGGTGATGCGGAACATT | + |
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Preference number: 5 (lower is better) Translates to: CCTVFAMERNSLDSF*RYSGRNSMLVMRNI Trigger: AATGTTCCGCATCACCAACATTGAGTTCCTTCCTGAGTACCGGCAGAAGGAGTCTAGGGAATTTCTCTCCATGGCAAAGACAGTACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 90 bp | AAAAGTCTGGCTGTTGTAGTATTCATGGACCACAATCCTTCTCACTaGAGAGATAAACTTGGCATTCCCCTGCACATACATCCCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSLAVVVFMDHNPSH*RDKLGIPLHIHPKV Trigger: CACCTTGGGATGTATGTGCAGGGGAATGCCAAGTTTATCTCTCCAGTGAGAAGGATTGTGGTCCATGAATACTACAACAGCCAGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | GGTGCACTTGCATTTCGGAGGATAGTAACTTGGGTAATACGGACTTaGGATTTTCCCCTCAAAGCTGTTGATTTCCTTGACCAGTATTGT | + |
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Preference number: 5 (lower is better) Translates to: GALAFRRIVTWVIRT*DFPLKAVDFLDQYC Trigger: ACAATACTGGTCAAGGAAATCAACAGCTTTGAGGGGAAAATCTCAAGTCCGTATTACCCAAGTTACTATCCTCCGAAATGCAAGTGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 90 bp | TTACAAAAGAGAAGGGACATACTTATGAATCCAGGGAACAAAGCTTaGCACCCTTGTGTAGACACCAGGAAAATTGGGTCTTCCACATCC | + |
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Preference number: 5 (lower is better) Translates to: LQKRRDILMNPGNKA*HPCVDTRKIGSSTS Trigger: GGATGTGGAAGACCCAATTTTCCTGGTGTCTACACAAGGGTGTCAAGCTTTGTTCCCTGGATTCATAAGTATGTCCCTTCTCTTTTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 90 bp | GTACATGTGTTCATTAATCTCCCACCAGCCGTGCTCACAGCCTTTTaGACTCTTCTTAGTTATGGAATAGTTGTAGAATTTCAGGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: VHVFINLPPAVLTAF*TLLSYGIVVEFQGY Trigger: ATAGCCCTGAAATTCTACAACTATTCCATAACTAAGAAGAGTGCAAAAGGCTGTGAGCACGGCTGGTGGGAGATTAATGAACACATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TCGCAGTCCCGGAAGCCATCACAGACCAGAGGGCCATaGTGCCGGAAGCTGCTGCTGTTGCAGGCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQSRKPSQTRGP*CRKLLLLQAGF Trigger: AAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTTCCGGGACTGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | ACCAAGAGTGGCTTGTCTGAAAGCCTGGAACTGCATTaGAGCTGGATGTGGACCAGGGGGCTGGGCACCCGG | + |
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Preference number: 6 (lower is better) Translates to: TKSGLSESLELH*SWMWTRGLGTR Trigger: CCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | CAGTCCCGGAAGCCATCACAGACCAGAGGGCCATGCTaGCGGAAGCTGCTGCTGTTGCAGGCAGGTTTTACA | + |
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Preference number: 6 (lower is better) Translates to: QSRKPSQTRGPC*RKLLLLQAGFT Trigger: TGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTTCCGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | GCTGGATGTGGACCAGGGGGCTGGGCACCCGGAAAATaGTCTCATGATCCATGTAGGAGCCGCAGTACATGT | + |
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Preference number: 6 (lower is better) Translates to: AGCGPGGWAPGK*SHDPCRSRSTC Trigger: ACATGTACTGCGGCTCCTACATGGATCATGAGACCATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | AGTGGCTTGTCTGAAAGCCTGGAACTGCATTGGAGCTaGATGTGGACCAGGGGGCTGGGCACCCGGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: SGLSESLELHWS*MWTRGLGTRKM Trigger: CATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | GGAAATCTCCAGAGGGTAGCGGAGGGTCAGATGGTCTaGATACAAGTACCGGGAGCAGCCGTTGTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: GNLQRVAEGQMV*IQVPGAAVVRS Trigger: GGATCTGACAACGGCTGCTCCCGGTACTTGTATGCAGACCATCTGACCCTCCGCTACCCTCTGGAGATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | AGCCATCACAGACCAGAGGGCCATGCTGCCGGAAGCTaGTGCTGTTGCAGGCAGGTTTTACAGTCACACAGA | + |
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Preference number: 6 (lower is better) Translates to: SHHRPEGHAAGS*CCCRQVLQSHR Trigger: TCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TCCTTTGCAGGCGTCGCTCTTGCCAGACATAACCCCTaGACAGAGCATGCGCGACGTGATGATCCCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: SFAGVALARHNP*TEHARRDDPIG Trigger: ACCTATGGGATCATCACGTCGCGCATGCTCTGTGCAGGGGTTATGTCTGGCAAGAGCGACGCCTGCAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | TGGAACTGCATTGGAGCTGGATGTGGACCAGGGGGCTaGGCACCCGGAAAATGGTCTCATGATCCATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: WNCIGAGCGPGG*APGKWSHDPCR Trigger: CCTACATGGATCATGAGACCATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | TTGTCTGAAAGCCTGGAACTGCATTGGAGCTGGATGTaGACCAGGGGGCTGGGCACCCGGAAAATGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LSESLELHWSWM*TRGLGTRKMVS Trigger: TGAGACCATTTTCCGGGTGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | AAAGGTCCTCCTGAATCTCCTTTGCAGGCGTCGCTCTaGCCAGACATAACCCCTGCACAGAGCATGCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: KGPPESPLQASL*PDITPAQSMRD Trigger: GTCGCGCATGCTCTGTGCAGGGGTTATGTCTGGCAAGAGCGACGCCTGCAAAGGAGATTCAGGAGGACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | CTCCCCACTGCGCACTTTCTGGCCCGCTGGAGGAATGCATATTGGTaGAATGAGCTGTTTCAGGGTTTCAGGCCAGGCTATGCTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LPTAHFLARWRNAYW*NELFQGFRPGYAEL Trigger: CAGCTCAGCATAGCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | GAGCATGCGCGACGTGATGATCCCATAGGTGGAAACACAGACGGTTaGATCTATGAGCTCTACCTCCGCTTGCTGCAAAACCGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: EHARRDDPIGGNTDG*IYELYLRLLQNRGA Trigger: GGCTCCCCGGTTTTGCAGCAAGCGGAGGTAGAGCTCATAGATCAAACCGTCTGTGTTTCCACCTATGGGATCATCACGTCGCGCATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | CGACAAGACAAAGGTCCTCCTGAATCTCCTTTGCAGGCGTCGCTCTaGCCAGACATAACCCCTGCACAGAGCATGCGCGACGTGATGATC | + |
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Preference number: 6 (lower is better) Translates to: RQDKGPPESPLQASL*PDITPAQSMRDVMI Trigger: GATCATCACGTCGCGCATGCTCTGTGCAGGGGTTATGTCTGGCAAGAGCGACGCCTGCAAAGGAGATTCAGGAGGACCTTTGTCTTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | ATTCTACCAAGAGTGGCTTGTCTGAAAGCCTGGAACTaGATTGGAGCTGGATGTGGACCAGGGGGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ILPRVACLKAWN*IGAGCGPGGWA Trigger: TGCCCAGCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CGCCATATTCTACCAAGAGTGGCTTGTCTGAAAGCCTaGAACTGCATTGGAGCTGGATGTGGACCAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RHILPRVACLKA*NCIGAGCGPGG Trigger: GCCCCCTGGTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CCTGCACATACATCCCAAGGTGAGCAGTCCATGGCGTaGGGTCAGACAGCCTGTTTCCATGGAAACAATGGG | + |
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Preference number: 6 (lower is better) Translates to: PAHTSQGEQSMA*GQTACFHGNNG Trigger: CCCATTGTTTCCATGGAAACAGGCTGTCTGACCCCACGCCATGGACTGCTCACCTTGGGATGTATGTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | CATCACAGACCAGAGGGCCATGCTGCCGGAAGCTGCTaGTGTTGCAGGCAGGTTTTACAGTCACACAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HHRPEGHAAGSC*CCRQVLQSHRK Trigger: TTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | AACCACCAACGATTCGGTGAAGGAAGGAAGAACTCCTaGTACAGCCGCAGCCTTCCTCGTCACTTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: NHQRFGEGRKNS*YSRSLPRHFHL Trigger: CAGATGGAAGTGACGAGGAAGGCTGCGGCTGTAGCAGGAGTTCTTCCTTCCTTCACCGAATCGTTGGTGGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | ATTCCCCTGCACATACATCCCAAGGTGAGCAGTCCATaGCGTGGGGTCAGACAGCCTGTTTCCATGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: IPLHIHPKVSSP*RGVRQPVSMET Trigger: TGTTTCCATGGAAACAGGCTGTCTGACCCCACGCCATGGACTGCTCACCTTGGGATGTATGTGCAGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | ACTGCGCACTTTCTGGCCCGCTGGAGGAATGCATATTaGTTGAATGAGCTGTTTCAGGGTTTCAGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TAHFLARWRNAY*LNELFQGFRPG Trigger: GCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CCAGCACTTCTCCCCACTGCGCACTTTCTGGCCCGCTaGAGGAATGCATATTGGTTGAATGAGCTGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PALLPTAHFLAR*RNAYWLNELFQ Trigger: CTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGCAGTGGGGAGAAGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | CAGACCAGAGGGCCATGCTGCCGGAAGCTGCTGCTGTaGCAGGCAGGTTTTACAGTCACACAGAAAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: QTRGPCCRKLLL*QAGFTVTQKSS Trigger: TGAACTTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | CCAGACCCTGCAAGCTCCCCACAGAAGTGCGGTTTATaGTACTGGTTTGAATGGAGTCCTTCAAGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PDPASSPQKCGL*YWFEWSPSRWP Trigger: CGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTTGCAGGGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | TCGAAACAGTCATTCACTCCGTCACAACGCTGGGCCTaGGGGACACACAAACCGGAGGAGCACCTAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SKQSFTPSQRWA*GTHKPEEHLKD Trigger: ATCTTTTAGGTGCTCCTCCGGTTTGTGTGTCCCTCAGGCCCAGCGTTGTGACGGAGTGAATGACTGTTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | CGCACTTTCTGGCCCGCTGGAGGAATGCATATTGGTTaGATGAGCTGTTTCAGGGTTTCAGGCCAGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: RTFWPAGGMHIG*MSCFRVSGQAM Trigger: CATAGCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CTTCTCCCTGGTAGCTTCCCTGGGACACTGACCACCTaGATGGAGATGTTGGATATTTTGAGGTCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLPGSFPGTLTT*MEMLDILRSED Trigger: GTCCTCAGACCTCAAAATATCCAACATCTCCATCCAGGTGGTCAGTGTCCCAGGGAAGCTACCAGGGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | GCGCACTTTCTGGCCCGCTGGAGGAATGCATATTGGTaGAATGAGCTGTTTCAGGGTTTCAGGCCAGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: AHFLARWRNAYW*NELFQGFRPGY Trigger: ATAGCCTGGCCTGAAACCCTGAAACAGCTCATTCAACCAATATGCATTCCTCCAGCGGGCCAGAAAGTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | CAGACCCTGCAAGCTCCCCACAGAAGTGCGGTTTATGATACTGGTTaGAATGGAGTCCTTCAAGATGGCCGCCACACACTCCTCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: QTLQAPHRSAVYDTG*NGVLQDGRHTLLTE Trigger: TTCTGTGAGGAGTGTGTGGCGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTTGCAGGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | AAGCCATCACAGACCAGAGGGCCATGCTGCCGGAAGCTGCTGCTGTaGCAGGCAGGTTTTACAGTCACACAGAAAAGTTCATCACTTTCG | + |
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Preference number: 6 (lower is better) Translates to: KPSQTRGPCCRKLLL*QAGFTVTQKSSSLS Trigger: CGAAAGTGATGAACTTTTCTGTGTGACTGTAAAACCTGCCTGCAACAGCAGCAGCTTCCGGCAGCATGGCCCTCTGGTCTGTGATGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | ACATTTAAAGGTCCTACTGGTGCATGGGATGCTTCTAGTGCAGTTTaGCTCGTCCTGACCATCCTCGCAGTCCCGGAAGCCATCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TFKGPTGAWDASSAV*LVLTILAVPEAITD Trigger: GTCTGTGATGGCTTCCGGGACTGCGAGGATGGTCAGGACGAGCAAAACTGCACTAGAAGCATCCCATGCACCAGTAGGACCTTTAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | AAGCTCCCCACAGAAGTGCGGTTTATGATACTGGTTTaGATGGAGTCCTTCAAGATGGCCGCCACACACTCC | + |
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Preference number: 6 (lower is better) Translates to: KLPTEVRFMILV*MESFKMAATHS Trigger: GGAGTGTGTGGCGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CCTGCTACAGCCGCAGCCTTCCTCGTCACTTCCATCTaGACAGTCCACTATACCATCACATTGTGCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PATAAAFLVTSI*TVHYTITLCIL Trigger: CAAAATGCACAATGTGATGGTATAGTGGACTGTCCAGATGGAAGTGACGAGGAAGGCTGCGGCTGTAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | CAAGCTCCCCACAGAAGTGCGGTTTATGATACTGGTTaGAATGGAGTCCTTCAAGATGGCCGCCACACACTC | + |
|
Preference number: 6 (lower is better) Translates to: QAPHRSAVYDTG*NGVLQDGRHTL Trigger: GAGTGTGTGGCGGCCATCTTGAAGGACTCCATTCAAACCAGTATCATAAACCGCACTTCTGTGGGGAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | GTTGTAACCGCCATATTCTACCAAGAGTGGCTTGTCTaGAAGCCTGGAACTGCATTGGAGCTGGATGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VVTAIFYQEWLV*KPGTALELDVD Trigger: GTCCACATCCAGCTCCAATGCAGTTCCAGGCTTTCAGACAAGCCACTCTTGGTAGAATATGGCGGTTACAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | TCCATCACTCTTTCTTCGACAAGACAAAGGTCCTCCTaGATCTCCTTTGCAGGCGTCGCTCTTGCCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: SITLSSTRQRSS*ISFAGVALARH Trigger: ATGTCTGGCAAGAGCGACGCCTGCAAAGGAGATTCAGGAGGACCTTTGTCTTGTCGAAGAAAGAGTGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | CCCTTGGCATGTGGCATAACAAACACAATCCAAAAGTaGACCAGGAGACCGCCTTTGTTGTTACTGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: PLACGITNTIQK*TRRPPLLLLLT Trigger: CGTCAGCAGTAACAACAAAGGCGGTCTCCTGGTCCACTTTTGGATTGTGTTTGTTATGCCACATGCCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | TTCAAGATGGCCGCCACACACTCCTCACAGAAGATGTaGCCCTTGGCATGTGGCATAACAAACACAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: FKMAATHSSQKM*PLACGITNTIQ Trigger: TTGGATTGTGTTTGTTATGCCACATGCCAAGGGCCACATCTTCTGTGAGGAGTGTGTGGCGGCCATCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | ACAAACACAATCCAAAAGTGGACCAGGAGACCGCCTTaGTTGTTACTGCTGACGTCTGCAACCACAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TNTIQKWTRRPP*LLLLTSATTDC Trigger: GCAGTCTGTGGTTGCAGACGTCAGCAGTAACAACAAAGGCGGTCTCCTGGTCCACTTTTGGATTGTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | TGGGTTCACAGATTCTGTATAGAATGGCACTCCGGATaGGCAAGAGGGAGTCATAAACAGTCAGGGAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: WVHRFCIEWHSG*ARGSHKQSGSR Trigger: CCGACTCCCTGACTGTTTATGACTCCCTCTTGCCAATCCGGAGTGCCATTCTATACAGAATCTGTGAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | CGACGTGATGATCCCATAGGTGGAAACACAGACGGTTaGATCTATGAGCTCTACCTCCGCTTGCTGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RRDDPIGGNTDG*IYELYLRLLQN Trigger: GTTTTGCAGCAAGCGGAGGTAGAGCTCATAGATCAAACCGTCTGTGTTTCCACCTATGGGATCATCACGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | AGAGACGAATCAGATAACCCACGATGGCCACCAACTTaGAGTGACACATTAGTTGTCCCGAGGTTGCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RDESDNPRWPPT*SDTLVVPRLRK Trigger: TTTCCGCAACCTCGGGACAACTAATGTGTCACTTCAAGTTGGTGGCCATCGTGGGTTATCTGATTCGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | GTCTTTGCCATGGAGAGAAATTCCCTAGACTCCTTCTaGCGGTACTCAGGAAGGAACTCAATGTTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VFAMERNSLDSF*RYSGRNSMLVM Trigger: CATCACCAACATTGAGTTCCTTCCTGAGTACCGGCAGAAGGAGTCTAGGGAATTTCTCTCCATGGCAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TTTAATACCACAGAGTCCATATCCACAGCCAGACCCTaGAAGCTCCCCACAGAAGTGCGGTTTATGATACTG | + |
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Preference number: 6 (lower is better) Translates to: FNTTESISTARP*KLPTEVRFMIL Trigger: CAGTATCATAAACCGCACTTCTGTGGGGAGCTTGCAGGGTCTGGCTGTGGATATGGACTCTGTGGTATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | AACACAATCCAAAAGTGGACCAGGAGACCGCCTTTGTaGTTACTGCTGACGTCTGCAACCACAGACTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: NTIQKWTRRPPL*LLLTSATTDCL Trigger: TAAGCAGTCTGTGGTTGCAGACGTCAGCAGTAACAACAAAGGCGGTCTCCTGGTCCACTTTTGGATTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | GTCATAAACAGTCAGGGAGTCGGTGATACAGTTGTCGGCTTCCAATaGGATGGATTCAATGGAGAGACGAATCAGATAACCCACGATGGC | + |
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Preference number: 6 (lower is better) Translates to: VINSQGVGDTVVGFQ*DGFNGETNQITHDG Trigger: GCCATCGTGGGTTATCTGATTCGTCTCTCCATTGAATCCATCCAATTGGAAGCCGACAACTGTATCACCGACTCCCTGACTGTTTATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | TTGGCAAGAGGGAGTCATAAACAGTCAGGGAGTCGGTaGTACAGTTGTCGGCTTCCAATTGGATGGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LARGSHKQSGSR*YSCRLPIGWIQ Trigger: TTGAATCCATCCAATTGGAAGCCGACAACTGTATCACCGACTCCCTGACTGTTTATGACTCCCTCTTGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | GAGTTGATAGGGAAGTCTGGAATGTCCAGGTGCACTTaGATTTCGGAGGATAGTAACTTGGGTAATACGGAC | + |
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Preference number: 6 (lower is better) Translates to: ELIGKSGMSRCT*ISEDSNLGNTD Trigger: GTCCGTATTACCCAAGTTACTATCCTCCGAAATGCAAGTGCACCTGGACATTCCAGACTTCCCTATCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TGCCGAGAGTTGATAGGGAAGTCTGGAATGTCCAGGTaGACTTGCATTTCGGAGGATAGTAACTTGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: CRELIGKSGMSR*TCISEDSNLGN Trigger: ATTACCCAAGTTACTATCCTCCGAAATGCAAGTGCACCTGGACATTCCAGACTTCCCTATCAACTCTCGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | CCGCAGTACATGTGTTCATTAATCTCCCACCAGCCGTaGTCACAGCCTTTTGCACTCTTCTTAGTTATGGAA | + |
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Preference number: 6 (lower is better) Translates to: PQYMCSLISHQP*SQPFALFLVME Trigger: TTCCATAACTAAGAAGAGTGCAAAAGGCTGTGAGCACGGCTGGTGGGAGATTAATGAACACATGTACTGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CCA 72 bp | AATGTCATTGCCACATTTAAAGGTCCTACTGGTGCATaGGATGCTTCTAGTGCAGTTTTGCTCGTCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: NVIATFKGPTGA*DASSAVLLVLT Trigger: GGTCAGGACGAGCAAAACTGCACTAGAAGCATCCCATGCACCAGTAGGACCTTTAAATGTGGCAATGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | AGTCAGGGAGTCGGTGATACAGTTGTCGGCTTCCAATaGGATGGATTCAATGGAGAGACGAATCAGATAACC | + |
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Preference number: 6 (lower is better) Translates to: SQGVGDTVVGFQ*DGFNGETNQIT Trigger: GGTTATCTGATTCGTCTCTCCATTGAATCCATCCAATTGGAAGCCGACAACTGTATCACCGACTCCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | TGGAATAGTTGTAGAATTTCAGGGCTATGCCGAGAGTaGATAGGGAAGTCTGGAATGTCCAGGTGCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WNSCRISGLCRE*IGKSGMSRCTC Trigger: GCAAGTGCACCTGGACATTCCAGACTTCCCTATCAACTCTCGGCATAGCCCTGAAATTCTACAACTATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | ATGTCCAGGTGCACTTGCATTTCGGAGGATAGTAACTaGGGTAATACGGACTTGAGATTTTCCCCTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: MSRCTCISEDSN*GNTDLRFSPQS Trigger: GCTTTGAGGGGAAAATCTCAAGTCCGTATTACCCAAGTTACTATCCTCCGAAATGCAAGTGCACCTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | CCTTCTGCCGGTACTCAGGAAGGAACTCAATGTTGGTaGTGCGGAACATTCCAACAAAATAAAAAGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSAGTQEGTQCW*CGTFQQNKKHL Trigger: AAGATGCTTTTTATTTTGTTGGAATGTTCCGCATCACCAACATTGAGTTCCTTCCTGAGTACCGGCAGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS TCA 72 bp | GCATTTCGGAGGATAGTAACTTGGGTAATACGGACTTaGGATTTTCCCCTCAAAGCTGTTGATTTCCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFRRIVTWVIRT*DFPLKAVDFLD Trigger: GTCAAGGAAATCAACAGCTTTGAGGGGAAAATCTCAAGTCCGTATTACCCAAGTTACTATCCTCCGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | TCACATTGTGCATTTTGCTTCCTGAAGCAAATGTCATaGCCACATTTAAAGGTCCTACTGGTGCATGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SHCAFCFLKQMS*PHLKVLLVHGM Trigger: CATCCCATGCACCAGTAGGACCTTTAAATGTGGCAATGACATTTGCTTCAGGAAGCAAAATGCACAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 90 bp | ACTATACCATCACATTGTGCATTTTGCTTCCTGAAGCAAATGTCATaGCCACATTTAAAGGTCCTACTGGTGCATGGGATGCTTCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TIPSHCAFCFLKQMS*PHLKVLLVHGMLLV Trigger: CACTAGAAGCATCCCATGCACCAGTAGGACCTTTAAATGTGGCAATGACATTTGCTTCAGGAAGCAAAATGCACAATGTGATGGTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | GGAGAAAGCAGATGTTGTATAAACAAGGTTTACCACTaGCTGTACTGTCTTTGCCATGGAGAGAAATTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GESRCCINKVYH*LYCLCHGEKFP Trigger: AGGGAATTTCTCTCCATGGCAAAGACAGTACAGCAAGTGGTAAACCTTGTTTATACAACATCTGCTTTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TTCATTAATCTCCCACCAGCCGTGCTCACAGCCTTTTaGACTCTTCTTAGTTATGGAATAGTTGTAGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: FINLPPAVLTAF*TLLSYGIVVEF Trigger: AAATTCTACAACTATTCCATAACTAAGAAGAGTGCAAAAGGCTGTGAGCACGGCTGGTGGGAGATTAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS GCA 72 bp | TCTGGACAGTCCACTATACCATCACATTGTGCATTTTaGTTCCTGAAGCAAATGTCATTGCCACATTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGQSTIPSHCAF*FLKQMSLPHLK Trigger: CTTTAAATGTGGCAATGACATTTGCTTCAGGAAGCAAAATGCACAATGTGATGGTATAGTGGACTGTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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| CDS CAA 72 bp | ATCTGGACAGTCCACTATACCATCACATTGTGCATTTaGCTTCCTGAAGCAAATGTCATTGCCACATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: IWTVHYTITLCI*LPEANVIATFK Trigger: TTTAAATGTGGCAATGACATTTGCTTCAGGAAGCAAAATGCACAATGTGATGGTATAGTGGACTGTCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114562.3 |
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