Pregenerated sensors for TMPRSS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032091Ensembl transcript IDs: ENSMUST00000034599.15, ENSMUST00000165263.9, ENSMUST00000170069.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGAAACAGACTGAGGCCCAGGTCCCTGTGGCTGCATCCAGCACCTaGAGGGTGGATCTGTCCTTGGAGAGCCGGACTGCCACTCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: SKQTEAQVPVAASST*RVDLSLESRTATPG Trigger: GCCCGGAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCTCAGTCTGTTTCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | AGACTGAGGCCCAGGTCCCTGTGGCTGCATCCAGCACCTGCAGGGTaGATCTGTCCTTGGAGAGCCGGACTGCCACTCCGGGCTTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RLRPRSLWLHPAPAG*ICPWRAGLPLRAFQ Trigger: CTGAAAAGCCCGGAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCTCAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | CCTTGGAGAGCCGGACTGCCACTCCGGGCTTTTCAGGGAAGTCCTTaGCACAGTGTTCCTCATCCTCCCCTGAGGCGCAGTCAAGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PWRAGLPLRAFQGSP*HSVPHPPLRRSQGG Trigger: GCCACCTTGACTGCGCCTCAGGGGAGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAAGCCCGGAGTGGCAGTCCGGCTCTCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | CCAGGATGCTCCCACCACAGACATGCTGCTTGTTGTACTGGATGCTaGCCTGCCACGGCCAAGAATCCACAGGGGCCTCCACCCCACCCA | + |
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Preference number: 1 (lower is better) Translates to: PGCSHHRHAACCTGC*PATAKNPQGPPPHP Trigger: TGGGTGGGGTGGAGGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | GCAGGCTGTCTTGGCCAGTGCTTCTGTGAAGTTGTCGAAACAGACTaGGGCCCAGGTCCCTGTGGCTGCATCCAGCACCTGCAGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: AGCLGQCFCEVVETD*GPGPCGCIQHLQGG Trigger: TCCACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCAAGACAGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR GCA 90 bp | ATGCTCCCACCACAGACATGCTGCTTGTTGTACTGGATGCTGACCTaGCACGGCCAAGAATCCACAGGGGCCTCCACCCCACCCACCACA | + |
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Preference number: 1 (lower is better) Translates to: MLPPQTCCLLYWMLT*HGQESTGASTPPTT Trigger: TGTGGTGGGTGGGGTGGAGGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR GCA 90 bp | CTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTaGCACTTGTCAGAATGGTACATCAAAGGCCCACCACTGTCACCC | + |
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Preference number: 1 (lower is better) Translates to: LGPPHPWPQLTMPTT*HLSEWYIKGPPLSP Trigger: GGGTGACAGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | TGGGGATCCAGGATGCTCCCACCACAGACATGCTGCTTGTTGTACTaGATGCTGACCTGCCACGGCCAAGAATCCACAGGGGCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: WGSRMLPPQTCCLLY*MLTCHGQESTGAST Trigger: GGTGGAGGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR GCA 90 bp | GCTGTGAGGATCCAGTGGGGATCCAGGATGCTCCCACCACAGACATaGTGCTTGTTGTACTGGATGCTGACCTGCCACGGCCAAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: AVRIQWGSRMLPPQT*CLLYWMLTCHGQES Trigger: GGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCACTGGATCCTCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | CCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATaGTACATCAAAGGCCCACCACTGTCACCCTGGCAGGTGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: PWPQLTMPTTCHLSE*YIKGPPLSPWQVSL Trigger: CAAGGACACCTGCCAGGGTGACAGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | GTGACCTTGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATaGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: VTLVYTPGVLGPPHP*PQLTMPTTCHLSEW Trigger: CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCAAGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | CAGGCTCTTTCCACAGTCAAGGCAGCGCAAGGAAACCAGGGAGCCTaGGAGGCAGGATCTGCTTCCATTCTGCACCTGAAGTTCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: QALSTVKAAQGNQGA*EAGSASILHLKFLA Trigger: AGCCAGGAACTTCAGGTGCAGAATGGAAGCAGATCCTGCCTCTCAGGCTCCCTGGTTTCCTTGCGCTGCCTTGACTGTGGAAAGAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR GCA 90 bp | GTGAGGATCCAGTGGGGATCCAGGATGCTCCCACCACAGACATGCTaGTTGTTGTACTGGATGCTGACCTGCCACGGCCAAGAATCCACA | + |
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Preference number: 1 (lower is better) Translates to: VRIQWGSRMLPPQTC*LLYWMLTCHGQEST Trigger: TGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCACTGGATCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | TTCCTGGCTGTTTCCTGTGACTTGAGCAACAGGGAGGTTCTGATCTaGACGGATCTCCACTGCTCTGAAAGCGGGCTGGCTGTCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: FLAVSCDLSNREVLI*TDLHCSESGLAVIA Trigger: GGCTATGACAGCCAGCCCGCTTTCAGAGCAGTGGAGATCCGTCCAGATCAGAACCTCCCTGTTGCTCAAGTCACAGGAAACAGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | CTTCCCCTTCGTAGGCATCCTCTGCATTGCACCGTGTGCTGTCAATaGCCTGGACTGATGCCTGCAGTAGCATGTCAGACATCTTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LPLRRHPLHCTVCCQ*PGLMPAVACQTSFL Trigger: GAGGAAAGATGTCTGACATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGAGGATGCCTACGAAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | AGGATCTGCTTCCATTCTGCACCTGAAGTTCCTGGCTGTTTCCTGTaGCTTGAGCAACAGGGAGGTTCTGATCTGGACGGATCTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RICFHSAPEVPGCFL*LEQQGGSDLDGSPL Trigger: CAGTGGAGATCCGTCCAGATCAGAACCTCCCTGTTGCTCAAGTCACAGGAAACAGCCAGGAACTTCAGGTGCAGAATGGAAGCAGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR TCA 90 bp | GGGCAATGTCCTTCTCTTTGGGGTACAGAGGATTGGGTTCAGCGATaGAGATCTTGGCCACAGGCAAGGATGGAGAGTTACCCAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: GQCPSLWGTEDWVQR*RSWPQARMESYPVC Trigger: ACATACTGGGTAACTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGACATTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | GCAAAGGCCTTTCATACCCTTGTCTCATCTACTCAGCCAGTGATCTaGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: AKAFHTLVSSTQPVI*PFRRELTFLPSVEG Trigger: CCCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACAAGGGTATGAAAGGCCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR GCA 90 bp | TCCTCTGCATTGCACCGTGTGCTGTCAATGACCTGGACTGATGCCTaGAGTAGCATGTCAGACATCTTTCCTCCGTTTTCTTCTGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: SSALHRVLSMTWTDA*SSMSDIFPPFSSVK Trigger: CTTTACAGAAGAAAACGGAGGAAAGATGTCTGACATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | CTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTaGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LTLELTGLLRQCFQD*AKKMAKAFHTLVSS Trigger: AGATGAGACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CCA 90 bp | TGCAATACCCTGACACTAAAATATACACCTTACATTAGAACTGACTaGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGC | + |
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Preference number: 1 (lower is better) Translates to: CNTLTLKYTPYIRTD*SLTSVLSGLGKEDG Trigger: GCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTTTAGTGTCAGGGTATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | CAGGTCCCTGTGGCTGCATCCAGCACCTGCAGGGTGGATCTGTCCTaGGAGAGCCGGACTGCCACTCCGGGCTTTTCAGGGAAGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: QVPVAASSTCRVDLS*ESRTATPGFSGKSL Trigger: CAAGGACTTCCCTGAAAAGCCCGGAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR GCA 90 bp | GTACTGGATGCTGACCTGCCACGGCCAAGAATCCACAGGGGCCTCCACCCCACCGCTGCATCCAGCACCTaGAGGGTGGATCTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VLDADLPRPRIHRGLHPTAASST*RVDLSL Trigger: CAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGC...GGTGGGGTGGAGGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATAAGGGAAGCAGCTTCTaGATGTGGGGGACGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: GIHSRSTWAAASMAPAHDKGSSF*MWGTAA Trigger: CGCTGCCGTCCCCCACATCCAGAAGCTGCTTCCCTT...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | TCCTTGGAGAGCCGGACTGCCACTCCGGGCTTTTCAGGGAAGTCCTaGACACAGTGTTCCTCATCCTCCCCTGAGGCGCAGTCAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLESRTATPGFSGKS*TQCSSSSPEAQSRW Trigger: CCACCTTGACTGCGCCTCAGGGGAGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAAGCCCGGAGTGGCAGTCCGGCTCTCCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | CCGCCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTaGTCAGAATGGTACATCAAAGGCCCACCACTGTCACCCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PPHPWPQLTMPTTCH*SEWYIKGPPLSPWQ Trigger: CTGCCAGGGTGACAGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | ATCCAGTGGGGATCCAGGATGCTCCCACCACAGACATGCTGCTTGTaGTACTGGATGCTGACCTGCCACGGCCAAGAATCCACAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: IQWGSRMLPPQTCCL*YWMLTCHGQESTGA Trigger: GGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCACTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | AGGATCCAGTGGGGATCCAGGATGCTCCCACCACAGACATGCTGCTaGTTGTACTGGATGCTGACCTGCCACGGCCAAGAATCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: RIQWGSRMLPPQTCC*LYWMLTCHGQESTG Trigger: CCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCACTGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTGCCACCCTGTGGGGTACCTGCACACAGCATCTCAGCGGTCACTTCCCCCTTCCATTCTGCACCTaGAGTTCCTGGCTGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VLATLWGTCTQHLSGHFPLPFCT*SSWLFP Trigger: AGGAAACAGCCAGGAACTTCAGGTGCAGAATGGAAG...GGGGAAGTGACCGCTGAGATGCTGTGTGCAGGTACCCCACAGGGTGGCAAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | TCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTTaGGGAGATGCAGGGGTGGCTGAGCTAGCCCATCTGACTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: SMSWIYSHGPHVSQG*GDAGVAELAHLTPL Trigger: GAGTGGAGTCAGATGGGCTAGCTCAGCCACCCCTGCATCTCCCAAACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTTCCTCATCCTCCCCTaGGGCGCAGTCAAGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPFLILP*GAVKVA Trigger: GGCCACCTTGACTGCGCCTCAGGGGAGGATGAGGAA...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCCAATGACCCAGACTGGTGTGGCTGGGACAAGCACCTCATCAGAGAAGTGTTGTACTGGATGCTaGCCTGCCACGGCCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: PHPMTQTGVAGTSTSSEKCCTGC*PATAKN Trigger: ATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACA...CTTCTCTGATGAGGTGCTTGTCCCAGCCACACCAGTCTGGGTCATTGGATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCATGCCGTAGGTAGGAAGGGAAGCAGCTTCTaGATGTGGGGGACGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: FKEALVPYLTLRGHAVGRKGSSF*MWGTAA Trigger: CGCTGCCGTCCCCCACATCCAGAAGCTGCTTCCCTT...CCTACCTACGGCATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | AGCCCATCTGACTCCACTCCGGGCACCTCTGCAATGTATCCTTGCTaGCTGCAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SPSDSTPGTSAMYPC*LQGYQSLFKEALVP Trigger: TGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCCCGGAGTGGAGTCAGATGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTAGCAGTGGGCTGCTGTaGGGATCCAGTGGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPSSGLL*GSSGDP Trigger: TGGATCCCCACTGGATCCTCACAGCAGCCCACTGCT...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCCAGGTCCCTGTGGCTaGATCCAGCACCTGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVLSGLGKEDGKGLSYPCPGPCG*IQHLQG Trigger: ACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGG...ACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGTCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTTTGATGTCTCCCAGGGTTTaGGAGATGCAGGGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VESMSWIYSHGPHVSQGLMSPRV*EMQGWL Trigger: CAGCCACCCCTGCATCTCCCAAACCCTGGGAGACAT...CAAACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGACTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTGGGTGGATCTGTCCTTaGAGAGCCGGACTGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPGWICP*RAGLPL Trigger: GAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCC...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCCAATGACCCAGACTGGTGTGGCTGGGACAAGCACCTCATCAGAGAAGCAATGTCCTTCTCTTTaGGGTACAGAGGATTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PHPMTQTGVAGTSTSSEKQCPSL*GTEDWV Trigger: AACCCAATCCTCTGTACCCCAAAGAGAAGGACATTG...CTTCTCTGATGAGGTGCTTGTCCCAGCCACACCAGTCTGGGTCATTGGATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | GGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTaGAGGGGTCATGCCGTAGGTAGGTCTGAAGGGAAGCAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GYQSLFKEALVPYLT*RGHAVGRSEGKQLL Trigger: CAGAAGCTGCTTCCCTTCAGACCTACCTACGGCATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | TGCAGCTTAACAAGGGCAATGTCCTTCTCTTTGGGGTACAGAGGATaGGGTTCAGCGATGAAGATCTTGGCCACAGGCAAGGATGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CSLTRAMSFSLGYRG*GSAMKILATGKDGE Trigger: CTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGACATTGCCCTTGTTAAGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGTACTGGATGCTGACCTaGCACGGCCAAGAATCCACA | + |
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Preference number: 2 (lower is better) Translates to: LTGLLRQCFQDWAKKMAKYWMLT*HGQEST Trigger: TGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTA...CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | GGCACCTCTGCAATGTATCCTTGCTTGCTGCAGGGATACCAGAGTTaGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GTSAMYPCLLQGYQS*FKEALVPYLTLRGH Trigger: ATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 90 bp | TCCTTCTCTTTGGGGTACAGAGGATTGGGTTCAGCGATGAAGATCTaGGCCACAGGCAAGGATGGAGAGTTACCCAGTATGTTTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SFSLGYRGLGSAMKI*ATGKDGELPSMFEP Trigger: AGGCTCAAACATACTGGGTAACTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGCTCTTTCCACAGTCAAGGCAGCGCAAGGAAACCAGGGAGCCTGAGAGGAACACTTCTGAGAGTTaGGTCAATGTCCTGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: FRLFPQSRQRKETREPERNTSES*VNVLDL Trigger: TAAATCCAGGACATTGACTCAACTCTCAGAAGTGTT...CCTCTCAGGCTCCCTGGTTTCCTTGCGCTGCCTTGACTGTGGAAAGAGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTGAGTCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTTCTGCAATGTATCCTTaGTTGCTGCAGGGATACCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVESMSWIYSHGPHVSQGSAMYP*LLQGYQ Trigger: CTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGA...ACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGACTCAACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTCTCCCACCACAGACATaGTGCTTGTTGTACTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPLPPQT*CLLYWM Trigger: CATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAG...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CAA 90 bp | AATGTGAGTGGCATCTGCAGCTTAACAAGGGCAATGTCCTTCTCTTaGGGGTACAGAGGATTGGGTTCAGCGATGAAGATCTTGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: NVSGICSLTRAMSFS*GYRGLGSAMKILAT Trigger: TGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGACATTGCCCTTGTTAAGCTGCAGATGCCACTCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTTTCAGGGAAGTCCTTaGCACAGTGTTCCTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPFQGSP*HSVPHP Trigger: AGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAA...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTGTTGAGTCAATGTCCTaGATTTACTCCCATGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CLIYSASDLAFQERADFPVESMS*IYSHGP Trigger: TGGCCCATGGGAGTAAATCCAGGACATTGACTCAAC...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACACTAAAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGAGGCCCAGGTCCCTGTaGCTGCATCCAGCACCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTLKYTPYIRTDWSLTSVRPRSL*LHPAPA Trigger: TGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCT...CACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTTTAGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTAATTTATTAGTTCAGCAACTGAGACTCAGGCAGAATAACTTCTTTGGTAAGGGAAGCAGCTTCTaGATGTGGGGGACGGCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: AANLLVQQLRLRQNNFFGKGSSF*MWGTAA Trigger: CGCTGCCGTCCCCCACATCCAGAAGCTGCTTCCCTT...ACCAAAGAAGTTATTCTGCCTGAGTCTCAGTTGCTGAACTAATAAATTAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGTCTTTGGTTTGTCATTaGTGCCGTGTGTCAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTGLLRQCFQDWAKKMAKSLVCH*CRVSDG Trigger: TCCATCTGACACACGGCACCAATGACAAACCAAAGA...CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACATAGCCCATCTGTCTaGAGGCTGTCTTGGCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KYTPYIRTDWSLTSVLSGHSPSV*RLSWPV Trigger: CACTGGCCAAGACAGCCTGCAGACAGATGGGCTATG...TCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCTCATCTTCTTTGGTTTGTCATTaGTGCCGTGTGTCAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: FQDWAKKMAKAFHTLVSSSLVCH*CRVSDG Trigger: TCCATCTGACACACGGCACCAATGACAAACCAAAGA...AGATGAGACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTAATTTATTAGTTCAGCAACTGAGACTCAGGCAGAATAACTTCTTTGGTCAGTGCTTTCAGGACTaGGCAAAGAAGATGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AANLLVQQLRLRQNNFFGQCFQD*AKKMAK Trigger: CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTG...ACCAAAGAAGTTATTCTGCCTGAGTCTCAGTTGCTGAACTAATAAATTAGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGAAACACTTCTGAGAGTTaGGTCAATGTCCTGGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: KYTPYIRTDWSLTSVLSGNTSES*VNVLDL Trigger: TAAATCCAGGACATTGACTCAACTCTCAGAAGTGTT...TCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGATGTGACATCCTTAGTTaGATTCTTATTAAGCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: KYTPYIRTDWSLTSVLSGCDILS*ILIKQT Trigger: GGTCTGCTTAATAAGAATCCAACTAAGGATGTCACA...TCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | ACTGAGGCCCAGGTCCCTGTGGCTGCATCCAGCACCTaGAGGGTGGATCTGTCCTTGGAGAGCCGGACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TEAQVPVAASST*RVDLSLESRTA Trigger: GGCAGTCCGGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCTCAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | CCACAGACATGCTGCTTGTTGTACTGGATGCTGACCTaGCACGGCCAAGAATCCACAGGGGCCTCCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQTCCLLYWMLT*HGQESTGASTP Trigger: TGGGGTGGAGGCCCCTGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATaGCCCCAGCTCACGATGCCTACTACCTGCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: VYTPGVLGPPHP*PQLTMPTTCHL Trigger: CAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | CTTGGCCAGTGCTTCTGTGAAGTTGTCGAAACAGACTaGGGCCCAGGTCCCTGTGGCTGCATCCAGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGQCFCEVVETD*GPGPCGCIQHL Trigger: CAGGTGCTGGATGCAGCCACAGGGACCTGGGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | ATCCAGTGGGGATCCAGGATGCTCCCACCACAGACATaGTGCTTGTTGTACTGGATGCTGACCTGCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: IQWGSRMLPPQT*CLLYWMLTCHG Trigger: GCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCCCCACTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTTGCCACCCTGTGGGGTACCTGCACACAGCATCTCAGCGGTCACTTCCCCTTTTCAGGGAAGTCCTaGACACAGTGTTCCTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VLATLWGTCTQHLSGHFPFSGKS*TQCSSS Trigger: GGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAA...GGGGAAGTGACCGCTGAGATGCTGTGTGCAGGTACCCCACAGGGTGGCAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | CCATCTGTCTGCAGGCTGTCTTGGCCAGTGCTTCTGTaGAGTTGTCGAAACAGACTGAGGCCCAGGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSVCRLSWPVLL*SCRNRLRPRSL Trigger: CAGGGACCTGGGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCAAGACAGCCTGCAGACAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTaGCACTTGTCAGAATGGTACATCAAAGGCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PHPWPQLTMPTT*HLSEWYIKGPP Trigger: TGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | TACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATaGCTACTACCTGCCACTTGTCAGAATGGTACATCA | + |
|
Preference number: 3 (lower is better) Translates to: YLGRRIHGPSSR*LLPATCQNGTS Trigger: TGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGATTGGGTTCAGCGATGAAGATCTTGGCCACAGGCAAGGATGGAGAGTTCATGTCTCCCAGGGTTaGGGAGATGCAGGGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRIGFSDEDLGHRQGWRVHVSQG*GDAGVA Trigger: AGCCACCCCTGCATCTCCCAAACCCTGGGAGACATG...AACTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | AGCGCAAGGAAACCAGGGAGCCTGAGAGGCAGGATCTaGTTCCATTCTGCACCTGAAGTTCCTGGCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SARKPGSLRGRI*FHSAPEVPGCF Trigger: GAAACAGCCAGGAACTTCAGGTGCAGAATGGAAGCAGATCCTGCCTCTCAGGCTCCCTGGTTTCCTTGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGAGGGTGGATCTGTCCTaGGAGAGCCGGACTGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LTGLLRQCFQDWAKKMAKRVDLS*ESRTAT Trigger: AGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCCT...CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | CGTAGGCATCCTCTGCATTGCACCGTGTGCTGTCAATaGCCTGGACTGATGCCTGCAGTAGCATGTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RRHPLHCTVCCQ*PGLMPAVACQT Trigger: TGTCTGACATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGAGGATGCCTACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | GTTTTCTTCTGTAAAGCCCCATCCAATGACCCAGACTaGTGTGGCTGGGACAAGCACCTCATCAGAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VFFCKAPSNDPD*CGWDKHLIREG Trigger: CCCTTCTCTGATGAGGTGCTTGTCCCAGCCACACCAGTCTGGGTCATTGGATGGGGCTTTACAGAAGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | TTCCATTCTGCACCTGAAGTTCCTGGCTGTTTCCTGTaGCTTGAGCAACAGGGAGGTTCTGATCTGGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: FHSAPEVPGCFL*LEQQGGSDLDG Trigger: TCCGTCCAGATCAGAACCTCCCTGTTGCTCAAGTCACAGGAAACAGCCAGGAACTTCAGGTGCAGAATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | CCTTCTCTTTGGGGTACAGAGGATTGGGTTCAGCGATaGAGATCTTGGCCACAGGCAAGGATGGAGAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLWGTEDWVQR*RSWPQARMESY Trigger: GTAACTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | GCATCCTCTGCATTGCACCGTGTGCTGTCAATGACCTaGACTGATGCCTGCAGTAGCATGTCAGACATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSALHRVLSMT*TDACSSMSDIF Trigger: AAAGATGTCTGACATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGAGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | TTGCACCGTGTGCTGTCAATGACCTGGACTGATGCCTaGAGTAGCATGTCAGACATCTTTCCTCCGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHRVLSMTWTDA*SSMSDIFPPFS Trigger: AGAAAACGGAGGAAAGATGTCTGACATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR GCA 72 bp | CACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTaGTTTCAGGACTGGGCAAAGAAGATGGCAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLTLELTGLLRQ*FQDWAKKMAKA Trigger: GGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | GAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTaGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ELTGLLRQCFQD*AKKMAKAFHTL Trigger: AAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR TCA 72 bp | TTTCCTTCCTTCAGTGGAAGGGAGAGCCTCCTTGACTaGATAACACTTCTGAGAGTTGAGTCAATGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FPSFSGRESLLD*ITLLRVESMSW Trigger: CCAGGACATTGACTCAACTCTCAGAAGTGTTATTCAGTCAAGGAGGCTCTCCCTTCCACTGAAGGAAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | TTTCATACCCTTGTCTCATCTACTCAGCCAGTGATCTaGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FHTLVSSTQPVI*PFRRELTFLPS Trigger: TGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACAAGGGTATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | AACTTCTTTGGTTTGTCATTGGTGCCGTGTGTCAGATaGACACTTGTTCACATTTTCTGGGAAACTGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: NFFGLSLVPCVR*TLVHIFWETVM Trigger: CATGACAGTTTCCCAGAAAATGTGAACAAGTGTCCATCTGACACACGGCACCAATGACAAACCAAAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | CTGACACTAAAATATACACCTTACATTAGAACTGACTaGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTLKYTPYIRTD*SLTSVLSGLGK Trigger: TTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTTTAGTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| 3UTR CCA 72 bp | ACATTTTCTGGGAAACTGTCATGTGACATCCTTAGTTaGATTCTTATTAAGCAGACCAGGAAGTCTATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TFSGKLSCDILS*ILIKQTRKSMP Trigger: TGGCATAGACTTCCTGGTCTGCTTAATAAGAATCCAACTAAGGATGTCACATGACAGTTTCCCAGAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATTTCCTCATCCTCCCCTaGGGCGCAGTCAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDFLILP*GAVKVA Trigger: GGCCACCTTGACTGCGCCTCAGGGGAGGATGAGGAA...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | TGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGAAGGCCCAGGTCCCTGTaGCTGCATCCAGCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WYTLQEYLGRRIHGPSSRRPRSL*LHPAPA Trigger: TGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCT...TCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGGGAAACCAGGGAGCCTaGGAGGCAGGATCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYTPGVLGPPHPWPQLTMGNQGA*EAGSAS Trigger: GGAAGCAGATCCTGCCTCTCAGGCTCCCTGGTTTCC...CATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCACATGTCTCCCAGGGTTTGGGAGATGCAGGGGTGGCTGAGCTAGCCCATCAGGCTCAGCAGCACTaGAATGATGGGGATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPHVSQGLGDAGVAELAHQAQQH*NDGDPH Trigger: GTGGGGATCCCCATCATTGCAGTGCTGCTGAGCCTG...ATGGGCTAGCTCAGCCACCCCTGCATCTCCCAAACCCTGGGAGACATGTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR CCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGGGTGGATCTGTCCTTaGAGAGCCGGACTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDGWICP*RAGLPL Trigger: GAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCC...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATCCAGCACCTGCAGGGTaGATCTGTCCTTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDPAPAG*ICPWRA Trigger: GGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGG...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| 3UTR CAA 72 bp | AGCCGGACTGCCACTCCGGGCTTTTCAGGGAAGTCCTaGACACAGTGTTCCTCATCCTCCCCTGAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTATPGFSGKS*TQCSSSSPEAQ Trigger: CTGCGCCTCAGGGGAGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAAGCCCGGAGTGGCAGTCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGGGAGATGCAGGGGTGGCTGAGCTAGCCCATCTGACTCCACTCCGGGCACCTGGCTGTTTCCTGTaGCTTGAGCAACAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGDAGVAELAHLTPLRAPGCFL*LEQQGG Trigger: ACCTCCCTGTTGCTCAAGTCACAGGAAACAGCCAGG...TGCCCGGAGTGGAGTCAGATGGGCTAGCTCAGCCACCCCTGCATCTCCCAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR GCA 90 bp | TGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGAGCTGCATCCAGCACCTaGAGGGTGGATCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WYTLQEYLGRRIHGPSSRAASST*RVDLSL Trigger: CAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGC...TCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATCCTGGCTGTTTCCTGTaGCTTGAGCAACAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDPGCFL*LEQQGG Trigger: ACCTCCCTGTTGCTCAAGTCACAGGAAACAGCCAGG...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGCAGGCTCAGCAGCACTaGAATGATGGGGATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWQAQQH*NDGDPH Trigger: GTGGGGATCCCCATCATTGCAGTGCTGCTGAGCCTG...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGTTTTTGAAGGTCTCCTaGGGCCTTCGGGGTTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VYTPGVLGPPHPWPQLTMFLKVS*GLRGLR Trigger: TCGCAAACCCCGAAGGCCCCAGGAGACCTTCAAAAA...CATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCATGCCGTAGGTAGGACTGGCCCCTCTGAATaGAGGTCAGGGGACTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEALVPYLTLRGHAVGRTGPSE*RSGDCR Trigger: GCGGCAGTCCCCTGACCTTCATTCAGAGGGGCCAGT...CCTACCTACGGCATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR TCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATTGGCCAGTGCTTCTGTaGAGTTGTCGAAACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDWPVLL*SCRNRL Trigger: CAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCA...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGTGTTGTACTGGATGCTaGCCTGCCACGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWCCTGC*PATAKN Trigger: ATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACA...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTCCAGGTCCCTGTGGCTaGATCCAGCACCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTPGPCG*IQHLQG Trigger: ACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGG...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGAGGCTGTCTTGGCCAGTaGTTCTGTGAAGTTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WYTLQEYLGRRIHGPSSRGCLGQ*FCEVVE Trigger: TTCGACAACTTCACAGAAGCACTGGCCAAGACAGCC...TCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGCTGAGAGGCAGGATCTaGTTCCATTCTGCACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYTPGVLGPPHPWPQLTMLRGRI*FHSAPE Trigger: TTCAGGTGCAGAATGGAAGCAGATCCTGCCTCTCAG...CATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGTACTGGATGCTGACCTaGCACGGCCAAGAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWYWMLT*HGQEST Trigger: TGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTA...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGACTCCCACCACAGACATaGTGCTTGTTGTACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WYTLQEYLGRRIHGPSSRLPPQT*CLLYWM Trigger: CATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAG...TCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGCCAGCACCTGCAGGGTaGATCTGTCCTTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLAFQERADFPSFSGRPAPAG*ICPWRA Trigger: GGCTCTCCAAGGACAGATCCACCCTGCAGGTGCTGG...CCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGCCCAGGTCCCTGTaGCTGCATCCAGCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASDLAFQERADFPSFSGRPRSL*LHPAPA Trigger: TGCAGGTGCTGGATGCAGCCACAGGGACCTGGGCCT...TCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGAGTCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTCCACCACTGTCACCCTaGCAGGTGTCCTTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RVESMSWIYSHGPHVSQGPPLSP*QVSLPP Trigger: GGGTGGCAAGGACACCTGCCAGGGTGACAGTGGTGG...ACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGACTCAACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| 3UTR CAA 72 bp | TGTCTGCAGGCTGTCTTGGCCAGTGCTTCTGTGAAGTaGTCGAAACAGACTGAGGCCCAGGTCCCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQAVLASASVK*SKQTEAQVPVA Trigger: AGCCACAGGGACCTGGGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCAAGACAGCCTGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CAA 72 bp | GGATCCAGGATGCTCCCACCACAGACATGCTGCTTGTaGTACTGGATGCTGACCTGCCACGGCCAAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRMLPPQTCCL*YWMLTCHGQES Trigger: GGATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAGCATCCTGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | CGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGTCAATATCACGGTTGTTaGGGGGTTGGCCACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHGPSSRCLLPATCQNGQYHGC*GVGHCL Trigger: CAGACAGTGGCCAACCCCTCAACAACCGTGATATTG...ACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGGGGACTGCCGCAGATaGAGTAGTATTTATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDGDCRR*SSIYPE Trigger: TTCTGGATAAATACTACTTCATCTGCGGCAGTCCCC...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGCTTCCATTCTGCACCTaGAGTTCCTGGCTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWLPFCT*SSWLFP Trigger: AGGAAACAGCCAGGAACTTCAGGTGCAGAATGGAAG...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGAGTCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTGGAAACCAGGGAGCCTaGGAGGCAGGATCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVESMSWIYSHGPHVSQGGNQGA*EAGSAS Trigger: GGAAGCAGATCCTGCCTCTCAGGCTCCCTGGTTTCC...ACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGACTCAACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| 3UTR CAA 72 bp | CCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTaGTCAGAATGGTACATCAAAGGCCCACCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWPQLTMPTTCH*SEWYIKGPPLS Trigger: TGACAGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGTTCCTCATCCTCCCCTaGGGCGCAGTCAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGYQSLFKEALVPYLTLRFLILP*GAVKVA Trigger: GGCCACCTTGACTGCGCCTCAGGGGAGGATGAGGAA...CCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR TCA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGTTTCAGGGAAGTCCTTaGCACAGTGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWFQGSP*HSVPHP Trigger: AGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAA...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATAATGTGAGTGGCATCTaGAGCTTAACAAGGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDNVSGI*SLTRAM Trigger: CATTGCCCTTGTTAAGCTGCAGATGCCACTCACATT...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTGCTGTGAGGATCCAGTaGGGATCCAGGATGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTAVRIQ*GSRMLP Trigger: TGGGAGCATCCTGGATCCCCACTGGATCCTCACAGC...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATCAATGTCCTTCTCTTTaGGGTACAGAGGATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIHSRSTWAAASMAPAHDQCPSL*GTEDWV Trigger: AACCCAATCCTCTGTACCCCAAAGAGAAGGACATTG...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| 3UTR CAA 72 bp | GACTCCACTCCGGGCACCTCTGCAATGTATCCTTGCTaGCTGCAGGGATACCAGAGTTTGTTCAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTPGTSAMYPC*LQGYQSLFKEA Trigger: AGCCTCCTTGAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCCCGGAGTGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | GCGTTACATCTCAGACTTCCGAACATTGTAGATCCAGTTGAGATAGGCAGTGACACTGGCCCCTCTGAATaGAGGTCAGGGGACTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALHLRLPNIVDPVEIGSDTGPSE*RSGDCR Trigger: GCGGCAGTCCCCTGACCTTCATTCAGAGGGGCCAGT...GTCACTGCCTATCTCAACTGGATCTACAATGTTCGGAAGTCTGAGATGTAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAGCAGTGGGCTGCTGTaGGGATCCAGTGGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGSSGLL*GSSGDP Trigger: TGGATCCCCACTGGATCCTCACAGCAGCCCACTGCT...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR GCA 90 bp | CCGGGCACCTCTGCAATGTATCCTTGCTTGCTGCAGGGATACCAGAGTTTGTTCTACTGGATGCTGACCTaGCACGGCCAAGAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGTSAMYPCLLQGYQSLFYWMLT*HGQEST Trigger: TGTGGATTCTTGGCCGTGGCAGGTCAGCATCCAGTA...GAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR CCA 90 bp | CCGGGCACCTCTGCAATGTATCCTTGCTTGCTGCAGGGATACCAGAGTTTGTTCGTGCTGTCAATGACCTaGACTGATGCCTGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTSAMYPCLLQGYQSLFVLSMT*TDACSS Trigger: GCTACTGCAGGCATCAGTCCAGGTCATTGACAGCAC...GAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR TCA 90 bp | AGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGGAGCAATATCACGGTTGTTaGGGGGTTGGCCACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLAFQERADFPSFSGREQYHGC*GVGHCL Trigger: CAGACAGTGGCCAACCCCTCAACAACCGTGATATTG...CTCCCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | GCGTTACATCTCAGACTTCCGAACATTGTAGATCCAGTTGAGATAGGCAGTGACAGCAGTGGGCTGCTGTaGGGATCCAGTGGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALHLRLPNIVDPVEIGSDSSGLL*GSSGDP Trigger: TGGATCCCCACTGGATCCTCACAGCAGCCCACTGCT...GTCACTGCCTATCTCAACTGGATCTACAATGTTCGGAAGTCTGAGATGTAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGGAGTGTTTGAGCCTGCCCTaGCCTTCCAGCTTGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SDLAFQERADFPSFSGRECLSLP*PSSLTH Trigger: ATGTGTCAAGCTGGAAGGTCAGGGCAGGCTCAAACA...CTCCCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR TCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTTGTTTGAGCCTGCCCTaGCCTTCCAGCTTGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTCLSLP*PSSLTH Trigger: ATGTGTCAAGCTGGAAGGTCAGGGCAGGCTCAAACA...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR TCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTGTTACCCAGTATGTTTaGGCCTGCCCTGACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTVTQYV*ACPDLP Trigger: TGGAAGGTCAGGGCAGGCTCAAACATACTGGGTAAC...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR GCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTGGGGCCTTCGGGGTTTaGGAAAGGGAACAATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTGAFGV*EREQYH Trigger: GTGATATTGTTCCCTTTCGCAAACCCCGAAGGCCCC...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165263.9 ENSMUST00000170069.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGCTGCATCCAGCACCTaGAGGGTGGATCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGYQSLFKEALVPYLTLRAASST*RVDLSL Trigger: CAAGGACAGATCCACCCTGCAGGTGCTGGATGCAGC...CCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR CCA 90 bp | TACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCATGGGTGGATCTGTCCTTaGAGAGCCGGACTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YQSLFKEALVPYLTLRGHGWICP*RAGLPL Trigger: GAGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCC...ATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR TCA 90 bp | CTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGGTTACCCAGTATGTTTaGGCCTGCCCTGACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGLLRQCFQDWAKKMAKVTQYV*ACPDLP Trigger: TGGAAGGTCAGGGCAGGCTCAAACATACTGGGTAAC...CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR GCA 90 bp | AGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGGAGCTGAGAGGCAGGATCTaGTTCCATTCTGCACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDLAFQERADFPSFSGRELRGRI*FHSAPE Trigger: TTCAGGTGCAGAATGGAAGCAGATCCTGCCTCTCAG...CTCCCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR GCA 90 bp | CACGATGCCTACTACCTGCCACTTGTCAGAATGGTACATCAAAGGCCCACCACTCCACCACAGACATGCTaGTTGTTGTACTGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HDAYYLPLVRMVHQRPTTPPQTC*LLYWML Trigger: CAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGG...AGTGGTGGGCCTTTGATGTACCATTCTGACAAGTGGCAGGTAGTAGGCATCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
||
| CDS-3UTR CCA 90 bp | TACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCATGCTGTGAGGATCCAGTaGGGATCCAGGATGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQSLFKEALVPYLTLRGHAVRIQ*GSRMLP Trigger: TGGGAGCATCCTGGATCCCCACTGGATCCTCACAGC...ATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| 3UTR CAA 72 bp | TTGGGGTACAGAGGATTGGGTTCAGCGATGAAGATCTaGGCCACAGGCAAGGATGGAGAGTTACCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGYRGLGSAMKI*ATGKDGELPSM Trigger: CATACTGGGTAACTCTCCATCCTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| 3UTR CAA 72 bp | ACAAGGGCAATGTCCTTCTCTTTGGGGTACAGAGGATaGGGTTCAGCGATGAAGATCTTGGCCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRAMSFSLGYRG*GSAMKILATGK Trigger: CTTGCCTGTGGCCAAGATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGACATTGCCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCTCAATATCACGGTTGTTaGGGGGTTGGCCACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAFRTGQRRWQRPFIPLSQYHGC*GVGHCL Trigger: CAGACAGTGGCCAACCCCTCAACAACCGTGATATTG...AGACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGTCATGCCTGGCCAGTGCTTCTGTaGAGTTGTCGAAACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLFKEALVPYLTLRGHAWPVLL*SCRNRL Trigger: CAGTCTGTTTCGACAACTTCACAGAAGCACTGGCCA...GGCATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
||
| CDS-3UTR GCA 90 bp | CTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACGGGGCCTTCGGGGTTTaGGAAAGGGAACAATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLSGLGKEDGKGLSYGAFGV*EREQYH Trigger: GTGATATTGTTCCCTTTCGCAAACCCCGAAGGCCCC...GTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| CDS-3UTR GCA 90 bp | CAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGGGGGCCTTCGGGGTTTaGGAAAGGGAACAATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGYQSLFKEALVPYLTLRGAFGV*EREQYH Trigger: GTGATATTGTTCCCTTTCGCAAACCCCGAAGGCCCC...CCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| CDS-3UTR GCA 90 bp | GCGTTACATCTCAGACTTCCGAACATTGTAGATCCAGTTGAGATAGGCAGTGACCATAGCCCATCTGTCTaGAGGCTGTCTTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALHLRLPNIVDPVEIGSDHSPSV*RLSWPV Trigger: CACTGGCCAAGACAGCCTGCAGACAGATGGGCTATG...GTCACTGCCTATCTCAACTGGATCTACAATGTTCGGAAGTCTGAGATGTAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR GCA 90 bp | CTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGACCTGGACTGATGCCTaGAGTAGCATGTCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLLRQCFQDWAKKMAKTWTDA*SSMSDI Trigger: GATGTCTGACATGCTACTGCAGGCATCAGTCCAGGT...CTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CCA 90 bp | CTTACGTCAGTGCTTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACTTTTTGAAGGTCTCCTaGGGCCTTCGGGGTTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLSGLGKEDGKGLSYFLKVS*GLRGLR Trigger: TCGCAAACCCCGAAGGCCCCAGGAGACCTTCAAAAA...GTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAAGCACTGACGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| CDS-3UTR CCA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCTTTTTGAAGGTCTCCTaGGGCCTTCGGGGTTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGFLKVS*GLRGLR Trigger: TCGCAAACCCCGAAGGCCCCAGGAGACCTTCAAAAA...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 72 bp | AGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTaGAGGGGTCATGCCGTAGGTAGGTCTGAAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFKEALVPYLT*RGHAVGRSEGK Trigger: CTTCCCTTCAGACCTACCTACGGCATGACCCCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 72 bp | GGCATCTGCAGCTTAACAAGGGCAATGTCCTTCTCTTaGGGGTACAGAGGATTGGGTTCAGCGATGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GICSLTRAMSFS*GYRGLGSAMKI Trigger: GATCTTCATCGCTGAACCCAATCCTCTGTACCCCAAAGAGAAGGACATTGCCCTTGTTAAGCTGCAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170069.8 |
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| CDS-3UTR GCA 90 bp | AAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACCAGGTCCCTGTGGCTaGATCCAGCACCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYTPYIRTDWSLTSVLSGPGPCG*IQHLQG Trigger: ACCCTGCAGGTGCTGGATGCAGCCACAGGGACCTGG...TCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR GCA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCGGCTGTCTTGGCCAGTaGTTCTGTGAAGTTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGGCLGQ*FCEVVE Trigger: TTCGACAACTTCACAGAAGCACTGGCCAAGACAGCC...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR GCA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCCTCCCACCACAGACATaGTGCTTGTTGTACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGLPPQT*CLLYWM Trigger: CATCCAGTACAACAAGCAGCATGTCTGTGGTGGGAG...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR GCA 90 bp | AGAGTTGAGTCAATGTCCTGGATTTACTCCCATGGGCCACATGTCTCCCAGGGTAATGTGAGTGGCATCTaGAGCTTAACAAGGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RVESMSWIYSHGPHVSQGNVSGI*SLTRAM Trigger: CATTGCCCTTGTTAAGCTGCAGATGCCACTCACATT...ACCCTGGGAGACATGTGGCCCATGGGAGTAAATCCAGGACATTGACTCAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR GCA 90 bp | TTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCTCATCTTTCGTAGGCATCCTCTaGATTGCACCGTGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQDWAKKMAKAFHTLVSSFVGIL*IAPCAV Trigger: GACAGCACACGGTGCAATGCAGAGGATGCCTACGAA...AGATGAGACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR TCA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCTTTCAGGGAAGTCCTTaGCACAGTGTTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGFQGSP*HSVPHP Trigger: AGGATGAGGAACACTGTGTCAAGGACTTCCCTGAAA...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR TCA 90 bp | TTTCAGGACTGGGCAAAGAAGATGGCAAAGGCCTTTCATACCCTTGTCTCATCTCTTCCATTCTGCACCTaGAGTTCCTGGCTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQDWAKKMAKAFHTLVSSLPFCT*SSWLFP Trigger: AGGAAACAGCCAGGAACTTCAGGTGCAGAATGGAAG...AGATGAGACAAGGGTATGAAAGGCCTTTGCCATCTTCTTTGCCCAGTCCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CCA 90 bp | CAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTGAGGCAATGTCCTTCTCTTTaGGGTACAGAGGATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGYQSLFKEALVPYLTLRQCPSL*GTEDWV Trigger: AACCCAATCCTCTGTACCCCAAAGAGAAGGACATTG...CCTCAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| 3UTR CAA 72 bp | GCAATGTATCCTTGCTTGCTGCAGGGATACCAGAGTTaGTTCAAGGAGGCTCTTGTCCCATATCTGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AMYPCLLQGYQS*FKEALVPYLTL Trigger: CAAAGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| 3UTR CAA 72 bp | CAGCAACTGAGACTCAGGCAGAATAACTTCTTTGGTTaGTCATTGGTGCCGTGTGTCAGATGGACACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRLRQNNFFG*SLVPCVRWTLV Trigger: AACAAGTGTCCATCTGACACACGGCACCAATGACAAACCAAAGAAGTTATTCTGCCTGAGTCTCAGTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000170069.8 |
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| CDS-3UTR GCA 90 bp | CTGACACTAAAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCCACCACAGACATGCTaGTTGTTGTACTGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLKYTPYIRTDWSLTSVPPQTC*LLYWML Trigger: CAGCATCCAGTACAACAAGCAGCATGTCTGTGGTGG...CACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTTTAGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR TCA 90 bp | CTGACACTAAAATATACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGGGGGACTGCCGCAGATaGAGTAGTATTTATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLKYTPYIRTDWSLTSVGDCRR*SSIYPE Trigger: TTCTGGATAAATACTACTTCATCTGCGGCAGTCCCC...CACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGTATATTTTAGTGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR TCA 90 bp | AATTTATTAGTTCAGCAACTGAGACTCAGGCAGAATAACTTCTTTGGTTTGTCATGTTGTACTGGATGCTaGCCTGCCACGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLVQQLRLRQNNFFGLSCCTGC*PATAKN Trigger: ATTCTTGGCCGTGGCAGGTCAGCATCCAGTACAACA...TGACAAACCAAAGAAGTTATTCTGCCTGAGTCTCAGTTGCTGAACTAATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | TGGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGTCTGCAGGCTGTCTaGGCCAGTGCTTCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WYTLQEYLGRRIHGPSSRCLQAV*ASASVK Trigger: CTTCACAGAAGCACTGGCCAAGACAGCCTGCAGACA...TCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGCTGTTTCCTGTGACTaGAGCAACAGGGAGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIHSRSTWAAASMAPAHDAVSCD*SNREVL Trigger: CAGAACCTCCCTGTTGCTCAAGTCACAGGAAACAGC...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGAGTGCTTCTGTGAAGTaGTCGAAACAGACTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYTPGVLGPPHPWPQLTMSASVK*SKQTEA Trigger: GGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACT...CATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | CCGCATCCATGGCCCCAGCTCACGATGCCTACTACCTGCCACTTGTCAGAATGGCCACAGACATGCTGCTaGTTGTACTGGATGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PHPWPQLTMPTTCHLSEWPQTCC*LYWMLT Trigger: GGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGG...CCATTCTGACAAGTGGCAGGTAGTAGGCATCGTGAGCTGGGGCCATGGATGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | GTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATGTTTTCAGGGAAGTCCTaGACACAGTGTTCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VYTPGVLGPPHPWPQLTMFSGKS*TQCSSS Trigger: GGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAA...CATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | GGTATACACTCCAGGAGTACTTGGGCCGCCGCATCCATGGCCCCAGCTCACGATTTATCCAGAATCACCTaGATGAGAAGGGCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: GIHSRSTWAAASMAPAHDLSRIT*MRRATI Trigger: GATTGTGGCCCTTCTCATCAAGGTGATTCTGGATAA...ATCGTGAGCTGGGGCCATGGATGCGGCGGCCCAAGTACTCCTGGAGTGTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165263.9 |
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| CDS-3UTR CAA 90 bp | ATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGGGTGGATCTGTCCTaGGAGAGCCGGACTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IYSASDLAFQERADFPSFRVDLS*ESRTAT Trigger: AGTGGCAGTCCGGCTCTCCAAGGACAGATCCACCCT...GAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | CCGGGCACCTCTGCAATGTATCCTTGCTTGCTGCAGGGATACCAGAGTTTGTTCAGTGCTTCTGTGAAGTaGTCGAAACAGACTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGTSAMYPCLLQGYQSLFSASVK*SKQTEA Trigger: GGCCTCAGTCTGTTTCGACAACTTCACAGAAGCACT...GAACAAACTCTGGTATCCCTGCAGCAAGCAAGGATACATTGCAGAGGTGCCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | TGTCTCATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTGTCTGCAGGCTGTCTaGGCCAGTGCTTCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLIYSASDLAFQERADFPCLQAV*ASASVK Trigger: CTTCACAGAAGCACTGGCCAAGACAGCCTGCAGACA...AGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGATGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | GTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCAGTGGAAGGGAGACCACAGACATGCTGCTaGTTGTACTGGATGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VIWPFRRELTFLPSVEGRPQTCC*LYWMLT Trigger: GGTCAGCATCCAGTACAACAAGCAGCATGTCTGTGG...TCTCCCTTCCACTGAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGGGATACCAGAGTTTGTTCAAGGAGGCTCTTGTCCCATATCTGACTGCTGTTTCCTGTGACTaGAGCAACAGGGAGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLQGYQSLFKEALVPYLTAVSCD*SNREVL Trigger: CAGAACCTCCCTGTTGCTCAAGTCACAGGAAACAGC...AGTCAGATATGGGACAAGAGCCTCCTTGAACAAACTCTGGTATCCCTGCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | ATCTACTCAGCCAGTGATCTGGCCTTTCAGGAGAGAGCTGACTTTCCTTCCTTCTTTTCAGGGAAGTCCTaGACACAGTGTTCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: IYSASDLAFQERADFPSFFSGKS*TQCSSS Trigger: GGATGAGGAACACTGTGTCAAGGACTTCCCTGAAAA...GAAGGAAGGAAAGTCAGCTCTCTCCTGAAAGGCCAGATCACTGGCTGAGTAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS-3UTR CAA 90 bp | ACACCTTACATTAGAACTGACTGGTCTCTTACGTCAGTGCTTTCAGGACTGGGCTTATCCAGAATCACCTaGATGAGAAGGGCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: TPYIRTDWSLTSVLSGLGLSRIT*MRRATI Trigger: GATTGTGGCCCTTCTCATCAAGGTGATTCTGGATAA...GCCCAGTCCTGAAAGCACTGACGTAAGAGACCAGTCAGTTCTAATGTAAGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034599.15 |
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| CDS TCA 72 bp | AGGGAAGTCCTTGACACAGTGTTCCTCATCCTCCCCTaGGGCGCAGTCAAGGTGGCCGTCACACAACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: REVLDTVFLILP*GAVKVAVTQLA Trigger: GGCCAGTTGTGTGACGGCCACCTTGACTGCGCCTCAGGGGAGGATGAGGAACACTGTGTCAAGGACTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034599.15 ENSMUST00000165263.9 |
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