Pregenerated sensors for TMPRSS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024034Ensembl transcript IDs: ENSMUST00000024833.13, ENSMUST00000114549.4, ENSMUST00000236793.2, ENSMUST00000237740.2
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGTGTCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTaGAATGGGCAGAGCAGTAAAGCTGATACTCGCATCCAACATGGC | + |
Preference number: 1 (lower is better) Translates to: GVGVRRMLFPLSPFQ*NGQSSKADTRIQHG Trigger: GCCATGTTGGATGCGAGTATCAGCTTTACTGCTCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CCA 90 bp | AATCTAGGGTGGTGGCAGGGAAAGGTGCCACTTGTGTGCATGAGTTaGTTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCC | + |
Preference number: 1 (lower is better) Translates to: NLGWWQGKVPLVCMS*FMKHRKSIQGRFSP Trigger: GGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACCTTTCCCTGCCACCACCCTAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CCA 90 bp | GGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTCTAATCTaGATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAG | + |
Preference number: 1 (lower is better) Translates to: GTCILFTESYVGALI*IGLSQSTMAMCVQK Trigger: CTTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR TCA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGGGAAGGCTCGGGCTGTaGCCACCCTCAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: TPGTSSGKETIGWRSEIWGRLGL*PPSGAQ Trigger: CTGAGCTCCTGAGGGTGGTCACAGCCCGAGCCTTCC...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR TCA 90 bp | GTACCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGGAAGGCTCGGGCTGTaGCCACCCTCAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: VPTVGLGTCILFTESYVGGRLGL*PPSGAQ Trigger: CTGAGCTCCTGAGGGTGGTCACAGCCCGAGCCTTCC...CCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR TCA 90 bp | GGTACCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGAAGGCTCGGGCTGTaGCCACCCTCAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: GTHRGPWDLYSIHRKLCGGRLGL*PPSGAQ Trigger: CTGAGCTCCTGAGGGTGGTCACAGCCCGAGCCTTCC...CCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CCA 90 bp | TTTCTGTGCCCACCACCCACCACCACGCATTCACTCAAGCCCGAGGACAAGCCATCCCGGAACCAGCTCTaGGAAGGAGACGATTGGGTG | + |
Preference number: 2 (lower is better) Translates to: FLCPPPTTTHSLKPEDKPSRNQL*EGDDWV Trigger: CACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGA...TGGCTTGTCCTCGGGCTTGAGTGAATGCGTGGTGGTGGGTGGTGGGCACAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR TCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGGGAAGGCTCGGGCTGTaGCCACCCTCAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRGRLGL*PPSGAQ Trigger: CTGAGCTCCTGAGGGTGGTCACAGCCCGAGCCTTCC...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR TCA 90 bp | CACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTTGTTGGCAGGCACTCTaGGGAGAAAATCTAGGGTGG | + |
Preference number: 2 (lower is better) Translates to: HRPSSPLPEPALGRRRLGCWQAL*GENLGW Trigger: CCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACA...ACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | AAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGGAGAAAATCTAGGGTaGTGGCAGGGAAAGGTGCCA | + |
Preference number: 2 (lower is better) Translates to: KFPTPGTSSGKETIGWRSGENLG*WQGKVP Trigger: TGGCACCTTTCCCTGCCACCACCCTAGATTTTCTCC...AGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR GCA 90 bp | ACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTCTAGCCCAGTCTTGTCTCTaGCCAGACCTGTGTCCCTCA | + |
Preference number: 2 (lower is better) Translates to: TVGLGTCILFTESYVGALAQSCL*PDLCPS Trigger: TGAGGGACACAGGTCTGGGCAGAGACAAGACTGGGC...TAGAGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR GCA 90 bp | CCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTCTGTCTCCCTTTCAGTaGAATGGGCAGAGCAGTAAA | + |
Preference number: 2 (lower is better) Translates to: PTVGLGTCILFTESYVGALSPFQ*NGQSSK Trigger: TTTACTGCTCTGCCCATTGCACTGAAAGGGAGACAG...AGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR CAA 90 bp | AAATCTAGGGTGGTGGCAGGGAAAGGTGCCACTTGTGTGCATGAGTaGGTTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: KSRVVAGKGATCVHE*VHEAQKEHPRSFQP Trigger: GGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACCTTTCCCTGCCACCACCCTAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR TCA 90 bp | GACAAGCCAAGCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCGATTGGGTGGAGATCTaGGATCTGGGAACAAACAGG | + |
Preference number: 2 (lower is better) Translates to: DKPSYTKGHLPEGRNSSSDWVEI*DLGTNR Trigger: CCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATC...GCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGCTTGGCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CCA 90 bp | GCTGCCCCAACTGGTGTTCGATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGCTTGTGTGCATGAGTTaGTTCATGAAGCACAGAAAG | + |
Preference number: 2 (lower is better) Translates to: AAPTGVRWLCMRACLCWQLVCMS*FMKHRK Trigger: CTTTCTGTGCTTCATGAACCAACTCATGCACACAAG...CTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAGAAAATCTAGGGTGGTaGCAGGGAAAGGTGCCACTT | + |
Preference number: 2 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRENLGW*QGKVPL Trigger: AAGTGGCACCTTTCCCTGCCACCACCCTAGATTTTC...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | GACAAGCCAAGCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCAAGGAGACGATTGGGTaGAGATCTGAGATCTGGGAA | + |
Preference number: 2 (lower is better) Translates to: DKPSYTKGHLPEGRNSSSKETIG*RSEIWE Trigger: TTCCCAGATCTCAGATCTCCACCCAATCGTCTCCTT...GCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGCTTGGCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR GCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGCTGTCTCCCTTTCAGTaGAATGGGCAGAGCAGTAAA | + |
Preference number: 2 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRLSPFQ*NGQSSK Trigger: TTTACTGCTCTGCCCATTGCACTGAAAGGGAGACAG...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR GCA 90 bp | GGTGCCACTTGTGTGCATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGCTGTCTCCCTTTCAGTaGAATGGGCAGAGCAGTAAA | + |
Preference number: 2 (lower is better) Translates to: GATCVHELVHEAQKEHPRLSPFQ*NGQSSK Trigger: TTTACTGCTCTGCCCATTGCACTGAAAGGGAGACAG...CCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR GCA 90 bp | TTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTCTTTGCATGAGAGCTTaGCTGTGTTGGCAGGCACTC | + |
Preference number: 2 (lower is better) Translates to: LGGDLRSGNKQVTASSPILCMRA*LCWQAL Trigger: GAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAG...AATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | TTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGAAACTTGTGTGCATGAGTTaGTTCATGAAGCACAGAAAG | + |
Preference number: 2 (lower is better) Translates to: LPVLAGTLRRKSRVVAGKLVCMS*FMKHRK Trigger: CTTTCTGTGCTTCATGAACCAACTCATGCACACAAG...TTTCCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTAAGGAGACGATTGGGTaGAGATCTGAGATCTGGGAA | + |
Preference number: 2 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPKETIG*RSEIWE Trigger: TTCCCAGATCTCAGATCTCCACCCAATCGTCTCCTT...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | ACCCTCCTCTGTTATTGGGTAATATGGGAACCACAGGACTGTGAGCCATGTAAGAAGGAGACGATTGGGTaGAGATCTGAGATCTGGGAA | + |
Preference number: 2 (lower is better) Translates to: TLLCYWVIWEPQDCEPCKKETIG*RSEIWE Trigger: TTCCCAGATCTCAGATCTCCACCCAATCGTCTCCTT...CTTACATGGCTCACAGTCCTGTGGTTCCCATATTACCCAATAACAGAGGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CCA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTAAGGAGACGATTGGGTaGAGATCTGAGATCTGGGAA | + |
Preference number: 2 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCKETIG*RSEIWE Trigger: TTCCCAGATCTCAGATCTCCACCCAATCGTCTCCTT...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CCA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGACTTGTGTGCATGAGTTaGTTCATGAAGCACAGAAAG | + |
Preference number: 2 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRLVCMS*FMKHRK Trigger: CTTTCTGTGCTTCATGAACCAACTCATGCACACAAG...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR GCA 90 bp | CTGAGATCTGGGAAACCTATTCTAACAGGAAAATGCAAACTCTTGACGTGTGTAGGTGTTCGATGGCTTTaGATGAGAGCTTGCCTGTGT | + |
Preference number: 2 (lower is better) Translates to: LRSGKPILTGKCKLLTCVGVRWL*MRACLC Trigger: ACACAGGCAAGCTCTCATGCAAAGCCATCGAACACC...TACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR GCA 90 bp | GACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGGAACAAACAGGTGACTaGATCTTCACCAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: DTFQKGGIRQAPNPVRKQEQTGD*IFTNSH Trigger: ATGTGAATTGGTGAAGATGCAGTCACCTGTTTGTTC...CTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR GCA 90 bp | CTGAGATCTGGGAAACCTATTCTAACAGGAAAATGCAAACTCTTGACGTGTGTAGAACAAACAGGTGACTaGATCTTCACCAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: LRSGKPILTGKCKLLTCVEQTGD*IFTNSH Trigger: ATGTGAATTGGTGAAGATGCAGTCACCTGTTTGTTC...TACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR GCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAAATTCTAACAGGAAAATaGAAACTCTTGACGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: HSAYASHNAIWDTSEIWEILTGK*KLLTCV Trigger: TACACACGTCAAGAGTTTGCATTTTCCTGTTAGAAT...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CCA 90 bp | GGCTCTAATCTGGATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAGATACTTCTGAGATCTaGGAAACCTATTCTAACAGG | + |
Preference number: 2 (lower is better) Translates to: GSNLDRVESKYNGYVCTKDTSEI*ETYSNR Trigger: CCTGTTAGAATAGGTTTCCCAGATCTCAGAAGTATC...TTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | CTGTGCCCACCACCCACCACCACGCATTCACTCAAGCCCGAGGACAAGCCAAGCGCTTTGCATGAGAGCTaGCCTGTGTTGGCAGGCACT | + |
Preference number: 3 (lower is better) Translates to: LCPPPTTTHSLKPEDKPSALHES*PVLAGT Trigger: AGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGC...GCTTGGCTTGTCCTCGGGCTTGAGTGAATGCGTGGTGGTGGGTGGTGGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | CTGTGCCCACCACCCACCACCACGCATTCACTCAAGCCCGAGGACAAGCCAAGCCTGGGAAGGAGACGATaGGGTGGAGATCTGAGATCT | + |
Preference number: 3 (lower is better) Translates to: LCPPPTTTHSLKPEDKPSLGRRR*GGDLRS Trigger: AGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAG...GCTTGGCTTGTCCTCGGGCTTGAGTGAATGCGTGGTGGTGGGTGGTGGGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | CACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGCTTTGCATGAGAGCTaGCCTGTGTTGGCAGGCACT | + |
Preference number: 3 (lower is better) Translates to: HRPSSPLPEPALGRRRLGALHES*PVLAGT Trigger: AGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGC...ACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR GCA 72 bp | AGCAGCAAGCCACTCCAGGTGTCGGGGTTAGGAGAATaGTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGC | + |
Preference number: 3 (lower is better) Translates to: SSKPLQVSGLGE*SSRCLPFSAMG Trigger: GCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGACACCTGGAGTGGCTTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CAA 90 bp | TATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCAGCTGAGAGCTTGCCTGTGTaGGCAGGCACTCTGAGGAGA | + |
Preference number: 3 (lower is better) Translates to: YGNHRTVSHVRGTRTPSAESLPV*AGTLRR Trigger: TCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTC...AGCTGATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | CCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTGAGAGCTTGCCTGTGTaGGCAGGCACTCTGAGGAGA | + |
Preference number: 3 (lower is better) Translates to: PTVGLGTCILFTESYVGAESLPV*AGTLRR Trigger: TCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTC...AGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR CCA 72 bp | GTTCCTGGCTTCGTAGCTGCCCCAACTGGTGTTCGATaGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCA | + |
Preference number: 3 (lower is better) Translates to: VPGFVAAPTGVR*LCMRACLCWQA Trigger: TGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGCTACGAAGCCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR TCA 72 bp | TTGACGTGTGTAGGATGGGCTTCTGACGTGAGCCCATaGTTTCTGTGCCCACCACCCACCACCACGCATTCA | + |
Preference number: 3 (lower is better) Translates to: LTCVGWASDVSP*FLCPPPTTTHS Trigger: TGAATGCGTGGTGGTGGGTGGTGGGCACAGAAATCATGGGCTCACGTCAGAAGCCCATCCTACACACGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR CCA 72 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTaGAGATCTGAGATCTGGGAACAAACAGGTGACTGC | + |
Preference number: 3 (lower is better) Translates to: TPGTSSGKETIG*RSEIWEQTGDC Trigger: GCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CCA 72 bp | GAGCTGCCCACAGTTTCAGGTACCCACCGTGGGCCTTaGGACCTGTATTCTATTCACAGAAAGCTATGTGGG | + |
Preference number: 3 (lower is better) Translates to: ELPTVSGTHRGP*DLYSIHRKLCG Trigger: CCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTACCTGAAACTGTGGGCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAGAGAGCTTGCCTGTGTaGGCAGGCACTCTGAGGAGA | + |
Preference number: 3 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRESLPV*AGTLRR Trigger: TCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTC...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CAA 90 bp | TTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTGCTTTGCATGAGAGCTaGCCTGTGTTGGCAGGCACT | + |
Preference number: 3 (lower is better) Translates to: LGGDLRSGNKQVTASSPIALHES*PVLAGT Trigger: AGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGC...AATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CAA 90 bp | GGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTCATGGTGTTCGATGGCTTaGCATGAGAGCTTGCCTGTG | + |
Preference number: 3 (lower is better) Translates to: GWRSEIWEQTGDCIFTNSWCSMA*HESLPV Trigger: CACAGGCAAGCTCTCATGCAAAGCCATCGAACACCA...TGAATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CAA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTCTGGGAAGGAGACGATaGGGTGGAGATCTGAGATCT | + |
Preference number: 3 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCLGRRR*GGDLRS Trigger: AGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAG...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
||
3UTR GCA 72 bp | GGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTaGATCTTCACCAATTCACATCAGCAGTTCCTGGCT | + |
Preference number: 3 (lower is better) Translates to: GWRSEIWEQTGD*IFTNSHQQFLA Trigger: AGCCAGGAACTGCTGATGTGAATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
||
3UTR GCA 72 bp | CAGTCTTGTCTCTGCCCAGACCTGTGTCCCTCACTCTaGTTATGCATCCCACAATGCAATATGGGATACTTC | + |
Preference number: 3 (lower is better) Translates to: QSCLCPDLCPSL*LCIPQCNMGYF Trigger: GAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTGAGGGACACAGGTCTGGGCAGAGACAAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
||
3UTR TCA 72 bp | GGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGTaGATCAGTCACAGACCAAGTTCCCCACTCCCGGAA | + |
Preference number: 3 (lower is better) Translates to: GIRQAPNPVRKQ*ISHRPSSPLPE Trigger: TTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR-3UTR CAA 90 bp | ATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTACTTGTGTGCATGAGTaGGTTCATGAAGCACAGAAA | + |
Preference number: 3 (lower is better) Translates to: MALHESLPVLAGTLRRKSTCVHE*VHEAQK Trigger: TTTCTGTGCTTCATGAACCAACTCATGCACACAAGT...AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
||
3UTR-3UTR CAA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAACTTGTGTGCATGAGTaGGTTCATGAAGCACAGAAA | + |
Preference number: 3 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRTCVHE*VHEAQK Trigger: TTTCTGTGCTTCATGAACCAACTCATGCACACAAGT...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
||
3UTR CCA 72 bp | ATGTCTCACATAACCCTCCTCTGTTATTGGGTAATATaGGAACCACAGGACTGTGAGCCATGTAAGAGGGAC | + |
Preference number: 3 (lower is better) Translates to: MSHITLLCYWVI*EPQDCEPCKRD Trigger: GTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATATTACCCAATAACAGAGGAGGGTTATGTGAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
||
3UTR CCA 72 bp | CCCATAGCTATGTCTCACATAACCCTCCTCTGTTATTaGGTAATATGGGAACCACAGGACTGTGAGCCATGT | + |
Preference number: 3 (lower is better) Translates to: PIAMSHITLLCY*VIWEPQDCEPC Trigger: ACATGGCTCACAGTCCTGTGGTTCCCATATTACCCAATAACAGAGGAGGGTTATGTGAGACATAGCTATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR-3UTR CAA 90 bp | TCTGAGATCTGGGAAACCTATTCTAACAGGAAAATGCAAACTCTTGACGTGTGTTGGTGTTCGATGGCTTaGCATGAGAGCTTGCCTGTG | + |
Preference number: 3 (lower is better) Translates to: SEIWETYSNRKMQTLDVCWCSMA*HESLPV Trigger: CACAGGCAAGCTCTCATGCAAAGCCATCGAACACCA...ACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR GCA 72 bp | CTTCTGAGATCTGGGAAACCTATTCTAACAGGAAAATaGAAACTCTTGACGTGTGTAGGATGGGCTTCTGAC | + |
Preference number: 3 (lower is better) Translates to: LLRSGKPILTGK*KLLTCVGWASD Trigger: GTCAGAAGCCCATCCTACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR CCA 72 bp | ATTCTATTCACAGAAAGCTATGTGGGGGCTCTAATCTaGATAGGGTTGAGTCAAAGTACAATGGCTATGTGT | + |
Preference number: 3 (lower is better) Translates to: ILFTESYVGALI*IGLSQSTMAMC Trigger: ACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCCCCCACATAGCTTTCTGTGAATAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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3UTR CCA 72 bp | GCATCCCACAATGCAATATGGGATACTTCTGAGATCTaGGAAACCTATTCTAACAGGAAAATGCAAACTCTT | + |
Preference number: 3 (lower is better) Translates to: ASHNAIWDTSEI*ETYSNRKMQTL Trigger: AAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCG | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRKGTAA*FRTGEA Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTT...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | AAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTCCTCCACTGTCTCCCTaGCAGCTGTCCACACCGCCC | + |
Preference number: 4 (lower is better) Translates to: KFPTPGTSSGKETIGWRSPPLSP*QLSTPP Trigger: GGGCGGTGTGGACAGCTGCCAGGGAGACAGTGGAGG...AGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGGCCAGGGCCACTGAGTaGGCGAGGACATGTTTCCAC | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRARATE*ARTCFH Trigger: GTGGAAACATGTCCTCGCTCACTCAGTGGCCCTGGC...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTTGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: HRPSSPLPEPALGRRRLGCGSPS*GPAQFP Trigger: GGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACA...ACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGCACCTCCACTGTCTCCCTaGCAGCTGTCCACACCGCCC | + |
Preference number: 4 (lower is better) Translates to: GLGECSSRCLPFSAMGRAPPLSP*QLSTPP Trigger: GGGCGGTGTGGACAGCTGCCAGGGAGACAGTGGAGG...TGCTCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGCACAGTCTCCTCTCCTaGCACACCAGGGGTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRHSLLS*HTRGPP Trigger: TGGAGGACCCCTGGTGTGCCAGGAGAGGAGACTGTG...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGATCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTC | + |
Preference number: 4 (lower is better) Translates to: SGLGECSSRCLPFSAMGRSTQQL*TLGAPL Trigger: GAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGA...TCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGTCTCGTGCCACAGGCTaGGCACTTCAAGGTGACCAC | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRSRATG*ALQGDH Trigger: GTGGTCACCTTGAAGTGCTCAGCCTGTGGCACGAGA...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | AGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGTGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: SLPVLAGTLRRKSRVVAGCGSPS*GPAQFP Trigger: GGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACA...CCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGCCACGTGGCCTGAGGTaGAGCCTTCCCTCATGTACA | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRPRGLR*SLPSCT Trigger: TGTACATGAGGGAAGGCTGCACCTCAGGCCACGTGG...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GCTGCCCCAACTGGTGTTCGATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGCACAGTCTCCTCTCCTaGCACACCAGGGGTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: AAPTGVRWLCMRACLCWQHSLLS*HTRGPP Trigger: TGGAGGACCCCTGGTGTGCCAGGAGAGGAGACTGTG...CTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGTCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTC | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRSTQQL*TLGAPL Trigger: GAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGA...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGGGTGACCACGTGGCCTaGGGTGCAGCCTTCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRGDHVA*GAAFPH Trigger: ATGAGGGAAGGCTGCACCTCAGGCCACGTGGTCACC...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GTCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGTCTCGTGCCACAGGCTaGGCACTTCAAGGTGACCAC | + |
Preference number: 4 (lower is better) Translates to: VGVRRMLFPLSPFQCNGQSRATG*ALQGDH Trigger: GTGGTCACCTTGAAGTGCTCAGCCTGTGGCACGAGA...CTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCAGCTGCCAGGGCCACTGAGTaGGCGAGGACATGTTTCCAC | + |
Preference number: 4 (lower is better) Translates to: YGNHRTVSHVRGTRTPSAARATE*ARTCFH Trigger: GTGGAAACATGTCCTCGCTCACTCAGTGGCCCTGGC...AGCTGATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | GGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGCAGATCTGCGCAGCCACTaGGTCTCCATCTGGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: GLGECSSRCLPFSAMGRADLRSH*VSIWCH Trigger: GTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATC...TGCTCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR GCA 90 bp | CCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTGATCTGCGCAGCCACTaGGTCTCCATCTGGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PTVGLGTCILFTESYVGADLRSH*VSIWCH Trigger: GTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATC...AGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGTTCAAGGTGACCACGTaGCCTGAGGTGCAGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: TPGTSSGKETIGWRSEIWFKVTT*PEVQPS Trigger: GGAAGGCTGCACCTCAGGCCACGTGGTCACCTTGAA...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | TATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCAGCTCACAGTCTCCTCTCCTaGCACACCAGGGGTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: YGNHRTVSHVRGTRTPSAHSLLS*HTRGPP Trigger: TGGAGGACCCCTGGTGTGCCAGGAGAGGAGACTGTG...AGCTGATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | GGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGCACACAGTCTCCTCTCCTaGCACACCAGGGGTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: GLGECSSRCLPFSAMGRAHSLLS*HTRGPP Trigger: TGGAGGACCCCTGGTGTGCCAGGAGAGGAGACTGTG...TGCTCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCATCTCGTGCCACAGGCTaGGCACTTCAAGGTGACCAC | + |
Preference number: 4 (lower is better) Translates to: ESLPVLAGTLRRKSRVVASRATG*ALQGDH Trigger: GTGGTCACCTTGAAGTGCTCAGCCTGTGGCACGAGA...TGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GACTCCTCGATTCAGCTTGCTTTTAGTGCCCAGTCTTGTCTCTGCCCAGACCTGGCCAGGGCCACTGAGTaGGCGAGGACATGTTTCCAC | + |
Preference number: 4 (lower is better) Translates to: DSSIQLAFSAQSCLCPDLARATE*ARTCFH Trigger: GTGGAAACATGTCCTCGCTCACTCAGTGGCCCTGGC...CAGGTCTGGGCAGAGACAAGACTGGGCACTAAAAGCAAGCTGAATCGAGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | CACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTCTCTCCAACTGTTCGTaGATCCAGTCCAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: HRPSSPLPEPALGRRRLGLSNCS*IQSRKE Trigger: CTCCTTCCTGGACTGGATTCACGAACAGTTGGAGAG...ACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | GTCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGAAGGGACAAGATCTaGGCAGCCACTGCGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: VGVRRMLFPLSPFQCNGQRRDKI*AATASP Trigger: TGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCT...CTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR CCA 90 bp | TCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAAGTCATCGGAGCACATaGTCCTCCACGCAGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: SGLGECSSRCLPFSAMGRSHRST*SSTQQL Trigger: CAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACT...TCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GAGAAAACAGTGAATCAGTCACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCG | + |
Preference number: 4 (lower is better) Translates to: EKTVNQSQTKFPTPGTSSKGTAA*FRTGEA Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTT...AGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CAA 72 bp | TGGCTTCGTAGCTGCCCCAACTGGTGTTCGATGGCTTaGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTG | + |
Preference number: 4 (lower is better) Translates to: WLRSCPNWCSMA*HESLPVLAGTL Trigger: CAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGCTACGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCTCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTC | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTSTQQL*TLGAPL Trigger: GAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGA...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
||
CDS-3UTR TCA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAGGTGACCACGTGGCCTaGGGTGCAGCCTTCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRGDHVA*GAAFPH Trigger: ATGAGGGAAGGCTGCACCTCAGGCCACGTGGTCACC...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | ACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTCTATGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: TVGLGTCILFTESYVGALCGSPS*GPAQFP Trigger: GGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACA...TAGAGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | GTAATATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCCCACGTGGCCTGAGGTaGAGCCTTCCCTCATGTACA | + |
Preference number: 4 (lower is better) Translates to: VIWEPQDCEPCKRDPDTIPRGLR*SLPSCT Trigger: TGTACATGAGGGAAGGCTGCACCTCAGGCCACGTGG...GATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | GGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGCATGTAGCCCGTTCTCGTaGCACAGGCTGAGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: GLGECSSRCLPFSAMGRACSPFS*HRLSTS Trigger: TGAAGTGCTCAGCCTGTGGCACGAGAACGGGCTACA...TGCTCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGAGTCATCGGAGCACATaGTCCTCCACGCAGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRSHRST*SSTQQL Trigger: CAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACT...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGTACCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGAGTCATCGGAGCACATaGTCCTCCACGCAGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: GTHRGPWDLYSIHRKLCGSHRST*SSTQQL Trigger: CAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACT...CCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGTTCAAGGTGACCACGTaGCCTGAGGTGCAGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRFKVTT*PEVQPS Trigger: GGAAGGCTGCACCTCAGGCCACGTGGTCACCTTGAA...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GTCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGATTTTCTCCACCAGATaGGAGGGCACAGGACTGTCC | + |
Preference number: 4 (lower is better) Translates to: VGVRRMLFPLSPFQCNGQIFSTR*EGTGLS Trigger: GGACAGTCCTGTGCCCTCCCATCTGGTGGAGAAAAT...CTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGATTTTCTCCACCAGATaGGAGGGCACAGGACTGTCC | + |
Preference number: 4 (lower is better) Translates to: TPGTSSGKETIGWRSEIWIFSTR*EGTGLS Trigger: GGACAGTCCTGTGCCCTCCCATCTGGTGGAGAAAAT...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GCTGCCCCAACTGGTGTTCGATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGAGTTGGGCAGACAGATaGGCTGGATGGTCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: AAPTGVRWLCMRACLCWQSWADR*AGWSRQ Trigger: TTGACGAGACCATCCAGCCCATCTGTCTGCCCAACT...CTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | TTCTGTGCCCACCACCCACCACCACGCATTCACTCAAGCCCGAGGACAAGCCAAAGTTCTCTTCAGAGTTaGGCAGACAGATGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: FCAHHPPPRIHSSPRTSQSSLQS*ADRWAG Trigger: TCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACT...TTGGCTTGTCCTCGGGCTTGAGTGAATGCGTGGTGGTGGGTGGTGGGCACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | GGTGCCACTTGTGTGCATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCG | + |
Preference number: 4 (lower is better) Translates to: GATCVHELVHEAQKEHPRKGTAA*FRTGEA Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTT...CCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGCCTCCACTGTCTCCCTaGCAGCTGTCCACACCGCCC | + |
Preference number: 4 (lower is better) Translates to: DTFQKGGIRQAPNPVRKQPPLSP*QLSTPP Trigger: GGGCGGTGTGGACAGCTGCCAGGGAGACAGTGGAGG...CTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGCCAGGGCCACTGAGTaGGCGAGGACATGTTTCCAC | + |
Preference number: 4 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPARATE*ARTCFH Trigger: GTGGAAACATGTCCTCGCTCACTCAGTGGCCCTGGC...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | GTACCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGAGAAGGGACAAGATCTaGGCAGCCACTGCGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: VPTVGLGTCILFTESYVGRRDKI*AATASP Trigger: TGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCT...CCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | GGGCAGAGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGTCGGTACTCATCCTCTaGGTTCTTGCAGTCGGAGAC | + |
Preference number: 4 (lower is better) Translates to: GQSSKADTRIQHGHTGVQSVLIL*VLAVGD Trigger: GTCTCCGACTGCAAGAACGCAGAGGATGAGTACCGA...CTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCTCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | TCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGATCGGTACTCATCCTCTaGGTTCTTGCAGTCGGAGAC | + |
Preference number: 4 (lower is better) Translates to: SGLGECSSRCLPFSAMGRSVLIL*VLAVGD Trigger: GTCTCCGACTGCAAGAACGCAGAGGATGAGTACCGA...TCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGGCAGAGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGAGTTGGGCAGACAGATaGGCTGGATGGTCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: GQSSKADTRIQHGHTGVQSWADR*AGWSRQ Trigger: TTGACGAGACCATCCAGCCCATCTGTCTGCCCAACT...CTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCTCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CAA 72 bp | GGAGCTGCCCACAGTTTCAGGTACCCACCGTGGGCCTaGGGACCTGTATTCTATTCACAGAAAGCTATGTGG | + |
Preference number: 4 (lower is better) Translates to: GAAHSFRYPPWA*GPVFYSQKAMW Trigger: CCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTACCTGAAACTGTGGGCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | ATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTTCTCGTGCCACAGGCTaGGCACTTCAAGGTGACCAC | + |
Preference number: 4 (lower is better) Translates to: MALHESLPVLAGTLRRKSSRATG*ALQGDH Trigger: GTGGTCACCTTGAAGTGCTCAGCCTGTGGCACGAGA...AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GAGAAAACAGTGAATCAGTCACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGCTCGGACAGCTTCATaGGGGCTATGTCATTGCCCA | + |
Preference number: 4 (lower is better) Translates to: EKTVNQSQTKFPTPGTSSARTAS*GLCHCP Trigger: TGGGCAATGACATAGCCCTCATGAAGCTGTCCGAGC...AGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTTGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCCGSPS*GPAQFP Trigger: GGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACA...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCCTATCTCAGGGCCTCTaGTGTTGGGTTCCGGCTCCA | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTLSQGL*CWVPAP Trigger: TGGAGCCGGAACCCAACATCAGAGGCCCTGAGATAG...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGCCACGTGGCCTGAGGTaGAGCCTTCCCTCATGTACA | + |
Preference number: 4 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRPRGLR*SLPSCT Trigger: TGTACATGAGGGAAGGCTGCACCTCAGGCCACGTGG...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCCCACGTGGCCTGAGGTaGAGCCTTCCCTCATGTACA | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTPRGLR*SLPSCT Trigger: TGTACATGAGGGAAGGCTGCACCTCAGGCCACGTGG...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | TCGGGGTTAGGAGAATGCTCTTCCCGCTGTCTCCCTTTCAGTGCAATGGGCAGAGTCATAAACACAGTGTaGCGCAGTGACGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: SGLGECSSRCLPFSAMGRVINTV*RSDDPQ Trigger: CTGTGGATCGTCACTGCGGCACACTGTGTTTATGAC...TCTGCCCATTGCACTGAAAGGGAGACAGCGGGAAGAGCATTCTCCTAACCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGCACTGCGTCTCCATCTaGTGCCACAGGACTTATTTT | + |
Preference number: 4 (lower is better) Translates to: TPGTSSGKETIGWRSEIWHCVSI*CHRTYF Trigger: AAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTG...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR CCA 90 bp | CACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTCACTTGAAAGATGAATaGCACCTGTACTTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: HRPSSPLPEPALGRRRLGHLKDE*HLYFPE Trigger: CTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTG...ACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | ATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGTCATCGGAGCACATaGTCCTCCACGCAGCAGCTG | + |
Preference number: 4 (lower is better) Translates to: MALHESLPVLAGTLRRKSSHRST*SSTQQL Trigger: CAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACT...AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | ATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTTTCAAGGTGACCACGTaGCCTGAGGTGCAGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: MALHESLPVLAGTLRRKSFKVTT*PEVQPS Trigger: GGAAGGCTGCACCTCAGGCCACGTGGTCACCTTGAA...AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATA | + |
Preference number: 4 (lower is better) Translates to: TPGTSSGKETIGWRSEIWIAQPL*LVLAVI Trigger: TATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAAT...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGCCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAA | + |
Preference number: 4 (lower is better) Translates to: RFSPKVQRSGALAASHSRPYTSL*LQILFE Trigger: TTCAAACAAGATCTGCAACCACAGGGACGTGTATGG...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CAA 72 bp | TGGTGTTCGATGGCTTTGCATGAGAGCTTGCCTGTGTaGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: WCSMALHESLPV*AGTLRRKSRVV Trigger: CACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CAA 72 bp | TGCCCCAACTGGTGTTCGATGGCTTTGCATGAGAGCTaGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCT | + |
Preference number: 4 (lower is better) Translates to: CPNWCSMALHES*PVLAGTLRRKS Trigger: AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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3UTR CAA 72 bp | AGGCAGAACCCATCACTTAGGACTCCTCGATTCAGCTaGCTTTTAGTGCCCAGTCTTGTCTCTGCCCAGACC | + |
Preference number: 4 (lower is better) Translates to: RQNPSLRTPRFS*LLVPSLVSAQT Trigger: GGTCTGGGCAGAGACAAGACTGGGCACTAAAAGCAAGCTGAATCGAGGAGTCCTAAGTGATGGGTTCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAATCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTC | + |
Preference number: 4 (lower is better) Translates to: HSAYASHNAIWDTSEIWESTQQL*TLGAPL Trigger: GAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGA...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAAGGTGACCACGTGGCCTaGGGTGCAGCCTTCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: HSAYASHNAIWDTSEIWEGDHVA*GAAFPH Trigger: ATGAGGGAAGGCTGCACCTCAGGCCACGTGGTCACC...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGCTCGGACAGCTTCATaGGGGCTATGTCATTGCCCA | + |
Preference number: 4 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPARTAS*GLCHCP Trigger: TGGGCAATGACATAGCCCTCATGAAGCTGTCCGAGC...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | GGTGCCACTTGTGTGCATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGTGTAGCCCGTTCTCGTaGCACAGGCTGAGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: GATCVHELVHEAQKEHPRCSPFS*HRLSTS Trigger: TGAAGTGCTCAGCCTGTGGCACGAGAACGGGCTACA...CCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | GACTCCTCGATTCAGCTTGCTTTTAGTGCCCAGTCTTGTCTCTGCCCAGACCTGGTCATAAACACAGTGTaGCGCAGTGACGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: DSSIQLAFSAQSCLCPDLVINTV*RSDDPQ Trigger: CTGTGGATCGTCACTGCGGCACACTGTGTTTATGAC...CAGGTCTGGGCAGAGACAAGACTGGGCACTAAAAGCAAGCTGAATCGAGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGGTCATAAACACAGTGTaGCGCAGTGACGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRVINTV*RSDDPQ Trigger: CTGTGGATCGTCACTGCGGCACACTGTGTTTATGAC...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | TTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGAAAGTCATAAACACAGTGTaGCGCAGTGACGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: LPVLAGTLRRKSRVVAGKVINTV*RSDDPQ Trigger: CTGTGGATCGTCACTGCGGCACACTGTGTTTATGAC...TTTCCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAGAAGGGACAAGATCTaGGCAGCCACTGCGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTRRDKI*AATASG Trigger: ACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCT...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAATTCAAGGTGACCACGTaGCCTGAGGTGCAGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: HELVHEAQKEHPRSFQPQFKVTT*PEVQPS Trigger: GGAAGGCTGCACCTCAGGCCACGTGGTCACCTTGAA...TTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GAGAAAACAGTGAATCAGTCACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTATTTTCTCCACCAGATaGGAGGGCACAGGACTGTCC | + |
Preference number: 4 (lower is better) Translates to: EKTVNQSQTKFPTPGTSSIFSTR*EGTGLS Trigger: GGACAGTCCTGTGCCCTCCCATCTGGTGGAGAAAAT...AGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GTACCCACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGCGTCACCTTGTCATCTaGCAAGAGGTGATTGATGGA | + |
Preference number: 4 (lower is better) Translates to: VPTVGLGTCILFTESYVGRHLVI*QEVIDG Trigger: TCCATCAATCACCTCTTGTCAGATGACAAGGTGACG...CCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGTGGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGCTCGGACAGCTTCATaGGGGCTATGTCATTGCCCA | + |
Preference number: 4 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCARTAS*GLCHCP Trigger: TGGGCAATGACATAGCCCTCATGAAGCTGTCCGAGC...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | TATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCAGCTTGCGTCTCCATCTGGTaGCACAGGACTTATTTTCAA | + |
Preference number: 4 (lower is better) Translates to: YGNHRTVSHVRGTRTPSACVSIW*HRTYFQ Trigger: TTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCA...AGCTGATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR GCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCTCGGTACTCATCCTCTaGGTTCTTGCAGTCGGAGAC | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTSVLIL*VLAVGD Trigger: GTCTCCGACTGCAAGAACGCAGAGGATGAGTACCGA...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | ATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTTCGGTACTCATCCTCTaGGTTCTTGCAGTCGGAGAC | + |
Preference number: 4 (lower is better) Translates to: MALHESLPVLAGTLRRKSSVLIL*VLAVGD Trigger: GTCTCCGACTGCAAGAACGCAGAGGATGAGTACCGA...AGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCTCTCATGCAAAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GTAATATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCCACTGCGTCTCCATCTaGTGCCACAGGACTTATTTT | + |
Preference number: 4 (lower is better) Translates to: VIWEPQDCEPCKRDPDTIHCVSI*CHRTYF Trigger: AAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTG...GATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | TTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGAAAATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATA | + |
Preference number: 4 (lower is better) Translates to: LPVLAGTLRRKSRVVAGKIAQPL*LVLAVI Trigger: TATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAAT...TTTCCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTAGTTGGGCAGACAGATaGGCTGGATGGTCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPSWADR*AGWSRQ Trigger: TTGACGAGACCATCCAGCCCATCTGTCTGCCCAACT...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGTCAGTTCTCTTCAGAGTTaGGCAGACAGATGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: HEAQKEHPRSFQPQSPEVSSLQS*ADRWAG Trigger: TCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACT...GACCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GAGAAAACAGTGAATCAGTCACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTAGTTCTCTTCAGAGTTaGGCAGACAGATGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: EKTVNQSQTKFPTPGTSSSSLQS*ADRWAG Trigger: TCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACT...AGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGTGCCACTTGTGTGCATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGCGCAGCCACTGCGTCTaGTGCCACAGGACTTATTTT | + |
Preference number: 4 (lower is better) Translates to: GATCVHELVHEAQKEHPRRSHCV*CHRTYF Trigger: AAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCG...CCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATGCACACAAGTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | GGGCAGAGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGAATACACTTGAAAGATaGATGGCACCTGTACTTCCC | + |
Preference number: 4 (lower is better) Translates to: GQSSKADTRIQHGHTGVQNTLER*MAPVLP Trigger: GGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATT...CTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCTCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | ACCGTGGGCCTTGGGACCTGTATTCTATTCACAGAAAGCTATGTGGGGGCTCTACGTCACCTTGTCATCTaGCAAGAGGTGATTGATGGA | + |
Preference number: 4 (lower is better) Translates to: TVGLGTCILFTESYVGALRHLVI*QEVIDG Trigger: TCCATCAATCACCTCTTGTCAGATGACAAGGTGACG...TAGAGCCCCCACATAGCTTTCTGTGAATAGAATACAGGTCCCAAGGCCCACGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | CATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAACTCTCCAACTGTTCGTaGATCCAGTCCAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: HELVHEAQKEHPRSFQPQLSNCS*IQSRKE Trigger: CTCCTTCCTGGACTGGATTCACGAACAGTTGGAGAG...TTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTCTCTCCAACTGTTCGTaGATCCAGTCCAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCLSNCS*IQSRKE Trigger: CTCCTTCCTGGACTGGATTCACGAACAGTTGGAGAG...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGTGCGTCTCCATCTGGTaGCACAGGACTTATTTTCAA | + |
Preference number: 4 (lower is better) Translates to: SSKADTRIQHGHTGVQGRCVSIW*HRTYFQ Trigger: TTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCA...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR GCA 90 bp | TTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTAGAAGGGACAAGATCTaGGCAGCCACTGCGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: LGGDLRSGNKQVTASSPIRRDKI*AATASP Trigger: TGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCT...AATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR GCA 90 bp | TTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTTGTAGCCCGTTCTCGTaGCACAGGCTGAGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: LGGDLRSGNKQVTASSPICSPFS*HRLSTS Trigger: TGAAGTGCTCAGCCTGTGGCACGAGAACGGGCTACA...AATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CATGAGTTGGTTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAATTTTCTCCACCAGATaGGAGGGCACAGGACTGTCC | + |
Preference number: 4 (lower is better) Translates to: HELVHEAQKEHPRSFQPQIFSTR*EGTGLS Trigger: GGACAGTCCTGTGCCCTCCCATCTGGTGGAGAAAAT...TTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAACCAACTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGCTCTAATCTGGATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCG | + |
Preference number: 4 (lower is better) Translates to: GSNLDRVESKYNGYVCTKKGTAA*FRTGEA Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTT...TTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | GATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAGTAGTTTGTCCTCCTCCACTGTCTCCCTaGCAGCTGTCCACACCGCCC | + |
Preference number: 4 (lower is better) Translates to: DRVESKYNGYVCTKVVCPPPLSP*QLSTPP Trigger: GGGCGGTGTGGACAGCTGCCAGGGAGACAGTGGAGG...AGGACAAACTACTTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | AAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTTTAGTTCAATACACTTaGAAGATGAATGGCACCTGT | + |
Preference number: 4 (lower is better) Translates to: KFPTPGTSSGKETIGWRSLVQYT*KMNGTC Trigger: ACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAA...AGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGACGTCACCTTGTCATCTaGCAAGAGGTGATTGATGGA | + |
Preference number: 4 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRRHLVI*QEVIDG Trigger: TCCATCAATCACCTCTTGTCAGATGACAAGGTGACG...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | CATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGTCTGCGTCTCCATCTGGTaGCACAGGACTTATTTTCAA | + |
Preference number: 4 (lower is better) Translates to: HEAQKEHPRSFQPQSPEVCVSIW*HRTYFQ Trigger: TTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCA...GACCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR CCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGCACTGCGTCTCCATCTaGTGCCACAGGACTTATTTT | + |
Preference number: 4 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRHCVSI*CHRTYF Trigger: AAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTG...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS-3UTR CCA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATA | + |
Preference number: 4 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPIAQPL*LVLAVI Trigger: TATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAAT...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TATGGGAACCACAGGACTGTGAGCCATGTAAGAGGGACCCGGACACCATCAGCTTTAGTTCAATACACTTaGAAGATGAATGGCACCTGT | + |
Preference number: 4 (lower is better) Translates to: YGNHRTVSHVRGTRTPSALVQYT*KMNGTC Trigger: ACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAA...AGCTGATGGTGTCCGGGTCCCTCTTACATGGCTCACAGTCCTGTGGTTCCCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | GACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGCGTCACCTTGTCATCTaGCAAGAGGTGATTGATGGA | + |
Preference number: 4 (lower is better) Translates to: DTFQKGGIRQAPNPVRKQRHLVI*QEVIDG Trigger: TCCATCAATCACCTCTTGTCAGATGACAAGGTGACG...CTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAACTCTCCAACTGTTCGTaGATCCAGTCCAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: HSAYASHNAIWDTSEIWELSNCS*IQSRKE Trigger: CTCCTTCCTGGACTGGATTCACGAACAGTTGGAGAG...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | ACGATTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCCACTTGAAAGATGAATaGCACCTGTACTTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: TIGWRSEIWEQTGDCIFTHLKDE*HLYFPE Trigger: CTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTG...GGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAATCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAAAGTTGGGCAGACAGATaGGCTGGATGGTCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: HSAYASHNAIWDTSEIWESWADR*AGWSRQ Trigger: TTGACGAGACCATCCAGCCCATCTGTCTGCCCAACT...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGCCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAA | + |
Preference number: 4 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRPYTSL*LQILFE Trigger: TTCAAACAAGATCTGCAACCACAGGGACGTGTATGG...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | CAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAATACACTTGAAAGATaGATGGCACCTGTACTTCCC | + |
Preference number: 4 (lower is better) Translates to: QRDTFQKGGIRQAPNPVRNTLER*MAPVLP Trigger: GGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATT...TCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR TCA 90 bp | TTCATGAAGCACAGAAAGAGCATCCAAGGTCGTTTCAGCCCCAAAGTCCAGAGGAATACACTTGAAAGATaGATGGCACCTGTACTTCCC | + |
Preference number: 4 (lower is better) Translates to: FMKHRKSIQGRFSPKVQRNTLER*MAPVLP Trigger: GGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATT...CCTCTGGACTTTGGGGCTGAAACGACCTTGGATGCTCTTTCTGTGCTTCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR GCA 90 bp | CTGAGATCTGGGAAACCTATTCTAACAGGAAAATGCAAACTCTTGACGTGTGTATGTAGCCCGTTCTCGTaGCACAGGCTGAGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: LRSGKPILTGKCKLLTCVCSPFS*HRLSTS Trigger: TGAAGTGCTCAGCCTGTGGCACGAGAACGGGCTACA...TACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | CACTCTGCTTATGCATCCCACAATGCAATATGGGATACTTCTGAGATCTGGGAAAGTTCTCTTCAGAGTTaGGCAGACAGATGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: HSAYASHNAIWDTSEIWESSLQS*ADRWAG Trigger: TCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACT...TTCCCAGATCTCAGAAGTATCCCATATTGCATTGTGGGATGCATAAGCAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR TCA 90 bp | GATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAGTAGTTTGTCCTGCTCGGACAGCTTCATaGGGGCTATGTCATTGCCCA | + |
Preference number: 4 (lower is better) Translates to: DRVESKYNGYVCTKVVCPARTAS*GLCHCP Trigger: TGGGCAATGACATAGCCCTCATGAAGCTGTCCGAGC...AGGACAAACTACTTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | TTGGGTGGAGATCTGAGATCTGGGAACAAACAGGTGACTGCATCTTCACCAATTCCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAA | + |
Preference number: 4 (lower is better) Translates to: LGGDLRSGNKQVTASSPIPYTSL*LQILFE Trigger: TTCAAACAAGATCTGCAACCACAGGGACGTGTATGG...AATTGGTGAAGATGCAGTCACCTGTTTGTTCCCAGATCTCAGATCTCCACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CCA 90 bp | GGCTCTAATCTGGATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAAATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATA | + |
Preference number: 4 (lower is better) Translates to: GSNLDRVESKYNGYVCTKIAQPL*LVLAVI Trigger: TATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAAT...TTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS-3UTR CCA 90 bp | CTGAGATCTGGGAAACCTATTCTAACAGGAAAATGCAAACTCTTGACGTGTGTACCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAA | + |
Preference number: 4 (lower is better) Translates to: LRSGKPILTGKCKLLTCVPYTSL*LQILFE Trigger: TTCAAACAAGATCTGCAACCACAGGGACGTGTATGG...TACACACGTCAAGAGTTTGCATTTTCCTGTTAGAATAGGTTTCCCAGATCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS TCA 90 bp | GGCTTTTCCAGTCATCGGAGCACATGGTCCTCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTCTTTGGCCGCTCACCCGCACGCATC | + |
Preference number: 5 (lower is better) Translates to: GFSSHRSTWSSTQQL*TLGAPLFGRSPARI Trigger: GATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACTGGAAAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | CAGTCATCGGAGCACATGGTCCTCCACGCAGCAGCTGTGAACACTTaGAGCGCCGCTCTTTGGCCGCTCACCCGCACGCATCGGTACTCA | + |
Preference number: 5 (lower is better) Translates to: QSSEHMVLHAAAVNT*SAALWPLTRTHRYS Trigger: TGAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | ATGGTCCTCCACGCAGCAGCTGTGAACACTTGGAGCGCCGCTCTTTaGCCGCTCACCCGCACGCATCGGTACTCATCCTCTGCGTTCTTG | + |
Preference number: 5 (lower is better) Translates to: MVLHAAAVNTWSAAL*PLTRTHRYSSSAFL Trigger: CAAGAACGCAGAGGATGAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 90 bp | ATCATCCAAGCCGAAGAGAGACCGGAAGGAGAAGGGAGCTTCGGCTaGCGGAGGGTCATTCTCCCCCATGGTGACTATCTCAGGGCCTCT | + |
Preference number: 5 (lower is better) Translates to: IIQAEERPEGEGSFG*RRVILPHGDYLRAS Trigger: AGAGGCCCTGAGATAGTCACCATGGGGGAGAATGACCCTCCGGCAGCCGAAGCTCCCTTCTCCTTCCGGTCTCTCTTCGGCTTGGATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114549.4 |
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CDS TCA 90 bp | CAGGACAGGGGAGGCGTCACCTCCATCCTCTGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCCATCGGGAAAGTTCTCTTCAGAGTT | + |
Preference number: 5 (lower is better) Translates to: QDRGGVTSILCGSPS*GPAQFPIGKVLFRV Trigger: AACTCTGAAGAGAACTTTCCCGATGGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACAGAGGATGGAGGTGACGCCTCCCCTGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | CTGAGCTCACATAGCTGGGAAACCCCAGCTGGGCACAGGCAATCTTaGCATAGTGGCTTTTCCAGTCATCGGAGCACATGGTCCTCCACG | + |
Preference number: 5 (lower is better) Translates to: LSSHSWETPAGHRQS*HSGFSSHRSTWSST Trigger: CGTGGAGGACCATGTGCTCCGATGACTGGAAAAGCCACTATGCCAAGATTGCCTGTGCCCAGCTGGGGTTTCCCAGCTATGTGAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | TCCCTGTGGTTGCAGATCTTGTTTGAAATTAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCGTCACCTCCATCCTCTGTGGCTCCC | + |
Preference number: 5 (lower is better) Translates to: SLWLQILFEIKGTAA*FRTGEASPPSSVAP Trigger: GGGAGCCACAGAGGATGGAGGTGACGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 90 bp | CAGAGTGGTGTAACGCCGTCACCTTGTCATCTGACAAGAGGTGATTaGTGGACACGAAGTCGCCCTGGAACTGCTCCTCCAGCGCATCCA | + |
Preference number: 5 (lower is better) Translates to: QSGVTPSPCHLTRGD*WTRSRPGTAPPAHP Trigger: TGGATGCGCTGGAGGAGCAGTTCCAGGGCGACTTCGTGTCCATCAATCACCTCTTGTCAGATGACAAGGTGACGGCGTTACACCACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGCATTGCCCAGCCGCTTaGGCTTGTACTTGCTGTGAT | + |
Preference number: 5 (lower is better) Translates to: TPGTSSGKETIGWRSEIWHCPAA*ACTCCD Trigger: ATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATG...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 90 bp | TACACAGAGTGGTGTAACGCCGTCACCTTGTCATCTGACAAGAGGTaGTTGATGGACACGAAGTCGCCCTGGAACTGCTCCTCCAGCGCA | + |
Preference number: 5 (lower is better) Translates to: YTEWCNAVTLSSDKR*LMDTKSPWNCSSSA Trigger: TGCGCTGGAGGAGCAGTTCCAGGGCGACTTCGTGTCCATCAATCACCTCTTGTCAGATGACAAGGTGACGGCGTTACACCACTCTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 90 bp | GGGCAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTCCATCTGGTaGCACAGGACTTATTTTCAAATCATCCAAGCCGAAGAGAGACCG | + |
Preference number: 5 (lower is better) Translates to: GQKGQDLRSHCVSIW*HRTYFQIIQAEERP Trigger: CGGTCTCTCTTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS CCA 90 bp | CACTTGAAAGATGAATGGCACCTGTACTTCCCAGAGCAGTCGAAGTaGATGCCCAGACCGATGGCCAGCGCCAGTATCAAGGCGATGATC | + |
Preference number: 5 (lower is better) Translates to: HLKDEWHLYFPEQSK*MPRPMASASIKAMI Trigger: GATCATCGCCTTGATACTGGCGCTGGCCATCGGTCTGGGCATCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | TTCCCATCGGGAAAGTTCTCTTCAGAGTTGGGCAGACAGATGGGCTaGATGGTCTCGTCAAAGGTGAGTGGCTCGGACAGCTTCATGAGG | + |
Preference number: 5 (lower is better) Translates to: FPSGKFSSELGRQMG*MVSSKVSGSDSFMR Trigger: CCTCATGAAGCTGTCCGAGCCACTCACCTTTGACGAGACCATCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACTTTCCCGATGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 90 bp | CTTCAAGGGCAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTGGTaGCACAGGACTTATTTTCAAATCATCCAAGCCGAAGAGAGACCG | + |
Preference number: 5 (lower is better) Translates to: LQGQKGQDLRSHCVW*HRTYFQIIQAEERP Trigger: CGGTCTCTCTTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCCTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | AGCAGTAAAGCTGATACTCGCATCCAACATGGCCACACAGGAGTCCAGGGAAGGCATTGCCCAGCCGCTTaGGCTTGTACTTGCTGTGAT | + |
Preference number: 5 (lower is better) Translates to: SSKADTRIQHGHTGVQGRHCPAA*ACTCCD Trigger: ATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATG...CCTTCCCTGGACTCCTGTGTGGCCATGTTGGATGCGAGTATCAGCTTTACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | TTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGAAACATTGCCCAGCCGCTTaGGCTTGTACTTGCTGTGAT | + |
Preference number: 5 (lower is better) Translates to: LPVLAGTLRRKSRVVAGKHCPAA*ACTCCD Trigger: ATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATG...TTTCCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGCGATTCCAAAACTTGTaGCACCCACTAACTTCCACA | + |
Preference number: 5 (lower is better) Translates to: RFSPKVQRSGALAASHSRRFQNL*HPLTST Trigger: TGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCG...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GCTGCCCCAACTGGTGTTCGATGGCTTTGCATGAGAGCTTGCCTGTGTTGGCAGAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCC | + |
Preference number: 5 (lower is better) Translates to: AAPTGVRWLCMRACLCWQSRFQN*LHPLTS Trigger: GGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCT...CTGCCAACACAGGCAAGCTCTCATGCAAAGCCATCGAACACCAGTTGGGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | AGCTTGCCTGTGTTGGCAGGCACTCTGAGGAGAAAATCTAGGGTGGTGGCAGGGAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCC | + |
Preference number: 5 (lower is better) Translates to: SLPVLAGTLRRKSRVVAGSRFQN*LHPLTS Trigger: GGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCT...CCCTGCCACCACCCTAGATTTTCTCCTCAGAGTGCCTGCCAACACAGGCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | CAAGGGCAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTCCATCTaGTGCCACAGGACTTATTTTCAAATCATCCAAGCCGAAGAGAGA | + |
Preference number: 5 (lower is better) Translates to: QGQKGQDLRSHCVSI*CHRTYFQIIQAEER Trigger: TCTCTCTTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS CCA 90 bp | ACCCCGTCGCATCGAGCTGTTAGTTCAATACACTTGAAAGATGAATaGCACCTGTACTTCCCAGAGCAGTCGAAGTGGATGCCCAGACCG | + |
Preference number: 5 (lower is better) Translates to: TPSHRAVSSIHLKDE*HLYFPEQSKWMPRP Trigger: CGGTCTGGGCATCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAACAGCTCGATGCGACGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGCCCCAAAGTCCAGAGGTCAGGGGCTTTAGCAGCAAGCCACTCCAGGTACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATT | + |
Preference number: 5 (lower is better) Translates to: RFSPKVQRSGALAASHSRYTSLW*QILFEI Trigger: AATTTCAAACAAGATCTGCAACCACAGGGACGTGTA...CCTGGAGTGGCTTGCTGCTAAAGCCCCTGACCTCTGGACTTTGGGGCTGAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | AAGTTCCCCACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTCGATTCCAAAACTTGTaGCACCCACTAACTTCCACA | + |
Preference number: 5 (lower is better) Translates to: KFPTPGTSSGKETIGWRSRFQNL*HPLTST Trigger: TGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCG...AGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGTGGGGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | ACTCCCGGAACCAGCTCTGGGAAGGAGACGATTGGGTGGAGATCTGAGATCTGGCGATTCCAAAACTTGTaGCACCCACTAACTTCCACA | + |
Preference number: 5 (lower is better) Translates to: TPGTSSGKETIGWRSEIWRFQNL*HPLTST Trigger: TGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCG...CCAGATCTCAGATCTCCACCCAATCGTCTCCTTCCCAGAGCTGGTTCCGGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 90 bp | TGCAGTCGGAGACCCCGTCGCATCGAGCTGTTAGTTCAATACACTTaGAAGATGAATGGCACCTGTACTTCCCAGAGCAGTCGAAGTGGA | + |
Preference number: 5 (lower is better) Translates to: CSRRPRRIELLVQYT*KMNGTCTSQSSRSG Trigger: TCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAACAGCTCGATGCGACGGGGTCTCCGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | TGGCTCGGACAGCTTCATGAGGGCTATGTCATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATAGATGATTTTCTCCACCAGATGGGA | + |
Preference number: 5 (lower is better) Translates to: WLGQLHEGYVIAQPL*LVLAVIDDFLHQMG Trigger: TCCCATCTGGTGGAGAAAATCATCTATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATGACATAGCCCTCATGAAGCTGTCCGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | GCACAGAGCATGGAGGGAGAGATGATACCACCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAAATTAAAGGGACAGCCGCGTGGTTC | + |
Preference number: 5 (lower is better) Translates to: AQSMEGEMIPPYTSL*LQILFEIKGTAAWF Trigger: GAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCATCTCTCCCTCCATGCTCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 90 bp | AAACTTCAAGGGCAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTaGTGCCACAGGACTTATTTTCAAATCATCCAAGCCGAAGAGAGA | + |
Preference number: 5 (lower is better) Translates to: KLQGQKGQDLRSHCV*CHRTYFQIIQAEER Trigger: TCTCTCTTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCCTTGAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGCATTGCCCAGCCGCTTaGGCTTGTACTTGCTGTGAT | + |
Preference number: 5 (lower is better) Translates to: DTFQKGGIRQAPNPVRKQHCPAA*ACTCCD Trigger: ATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATG...CTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GAGAAAACAGTGAATCAGTCACAGACCAAGTTCCCCACTCCCGGAACCAGCTCTAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCC | + |
Preference number: 5 (lower is better) Translates to: EKTVNQSQTKFPTPGTSSSRFQN*LHPLTS Trigger: GGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCT...AGAGCTGGTTCCGGGAGTGGGGAACTTGGTCTGTGACTGATTCACTGTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGGTTGCAGATCTTGTTaGAAATTAAAGGGACAGCCG | + |
Preference number: 5 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPGCRSC*KLKGQP Trigger: CGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACC...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTGAGAAAACAGAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCC | + |
Preference number: 5 (lower is better) Translates to: DTFQKGGIRQAPNPVRKQSRFQN*LHPLTS Trigger: GGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCT...CTGTTTTCTCACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GCTACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTTACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATT | + |
Preference number: 5 (lower is better) Translates to: ATQRDTFQKGGIRQAPNPYTSLW*QILFEI Trigger: AATTTCAAACAAGATCTGCAACCACAGGGACGTGTA...AGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | TACACAAAGGGACACCTTCCAGAAGGGAGGAATTCGTCAAGCACCAAATCCTGTTACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATT | + |
Preference number: 5 (lower is better) Translates to: YTKGHLPEGRNSSSTKSCYTSLW*QILFEI Trigger: AATTTCAAACAAGATCTGCAACCACAGGGACGTGTA...ACAGGATTTGGTGCTTGACGAATTCCTCCCTTCTGGAAGGTGTCCCTTTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS-3UTR CAA 90 bp | GGCTCTAATCTGGATAGGGTTGAGTCAAAGTACAATGGCTATGTGTGTACAAAATACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATT | + |
Preference number: 5 (lower is better) Translates to: GSNLDRVESKYNGYVCTKYTSLW*QILFEI Trigger: AATTTCAAACAAGATCTGCAACCACAGGGACGTGTA...TTTTGTACACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 |
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CDS CAA 72 bp | GGAGCACATGGTCCTCCACGCAGCAGCTGTGAACACTaGGAGCGCCGCTCTTTGGCCGCTCACCCGCACGCA | + |
Preference number: 6 (lower is better) Translates to: GAHGPPRSSCEH*ERRSLAAHPHA Trigger: TGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | GAGCACATGGTCCTCCACGCAGCAGCTGTGAACACTTaGAGCGCCGCTCTTTGGCCGCTCACCCGCACGCAT | + |
Preference number: 6 (lower is better) Translates to: EHMVLHAAAVNT*SAALWPLTRTH Trigger: ATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | CCACGCAGCAGCTGTGAACACTTGGAGCGCCGCTCTTaGGCCGCTCACCCGCACGCATCGGTACTCATCCTC | + |
Preference number: 6 (lower is better) Translates to: PRSSCEHLERRS*AAHPHASVLIL Trigger: GAGGATGAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | CCAGTCATCGGAGCACATGGTCCTCCACGCAGCAGCTGTGAACACTaGGAGCGCCGCTCTTTGGCCGCTCACCCGCACGCATCGGTACTC | + |
Preference number: 6 (lower is better) Translates to: PVIGAHGPPRSSCEH*ERRSLAAHPHASVL Trigger: GAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 72 bp | AGTCATCGGAGCACATGGTCCTCCACGCAGCAGCTGTaGACACTTGGAGCGCCGCTCTTTGGCCGCTCACCC | + |
Preference number: 6 (lower is better) Translates to: SHRSTWSSTQQL*TLGAPLFGRSP Trigger: GGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATGTGCTCCGATGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | CACGCAGCAGCTGTGAACACTTGGAGCGCCGCTCTTTaGCCGCTCACCCGCACGCATCGGTACTCATCCTCT | + |
Preference number: 6 (lower is better) Translates to: HAAAVNTWSAAL*PLTRTHRYSSS Trigger: AGAGGATGAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | CATGGTCCTCCACGCAGCAGCTGTGAACACTTGGAGCGCCGCTCTTaGGCCGCTCACCCGCACGCATCGGTACTCATCCTCTGCGTTCTT | + |
Preference number: 6 (lower is better) Translates to: HGPPRSSCEHLERRS*AAHPHASVLILCVL Trigger: AAGAACGCAGAGGATGAGTACCGATGCGTGCGGGTGAGCGGCCAAAGAGCGGCGCTCCAAGTGTTCACAGCTGCTGCGTGGAGGACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 72 bp | GCCGAAGAGAGACCGGAAGGAGAAGGGAGCTTCGGCTaGCGGAGGGTCATTCTCCCCCATGGTGACTATCTC | + |
Preference number: 6 (lower is better) Translates to: AEERPEGEGSFG*RRVILPHGDYL Trigger: GAGATAGTCACCATGGGGGAGAATGACCCTCCGGCAGCCGAAGCTCCCTTCTCCTTCCGGTCTCTCTTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114549.4 |
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CDS TCA 72 bp | GGAGGCGTCACCTCCATCCTCTGTGGCTCCCCATCCTaGGGTCCAGCACAGTTTCCCATCGGGAAAGTTCTC | + |
Preference number: 6 (lower is better) Translates to: GGVTSILCGSPS*GPAQFPIGKVL Trigger: GAGAACTTTCCCGATGGGAAACTGTGCTGGACCTCAGGATGGGGAGCCACAGAGGATGGAGGTGACGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | CTCGTGCCACAGGCTGAGCACTTCAAGGTGACCACGTaGCCTGAGGTGCAGCCTTCCCTCATGTACACAGAG | + |
Preference number: 6 (lower is better) Translates to: LVPQAEHFKVTT*PEVQPSLMYTE Trigger: CTCTGTGTACATGAGGGAAGGCTGCACCTCAGGCCACGTGGTCACCTTGAAGTGCTCAGCCTGTGGCACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 72 bp | AATGGCACCTGTACTTCCCAGAGCAGTCGAAGTGGATaGCCAGACCGATGGCCAGCGCCAGTATCAAGGCGA | + |
Preference number: 6 (lower is better) Translates to: NGTCTSQSSRSG*PDRWPAPVSRR Trigger: TCGCCTTGATACTGGCGCTGGCCATCGGTCTGGGCATCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | GATGAATGGCACCTGTACTTCCCAGAGCAGTCGAAGTaGATGCCCAGACCGATGGCCAGCGCCAGTATCAAG | + |
Preference number: 6 (lower is better) Translates to: DEWHLYFPEQSK*MPRPMASASIK Trigger: CTTGATACTGGCGCTGGCCATCGGTCTGGGCATCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | GCGCATCCACTCTTAGGTGGTCTGAGCTCACATAGCTaGGAAACCCCAGCTGGGCACAGGCAATCTTGGCAT | + |
Preference number: 6 (lower is better) Translates to: AHPLLGGLSSHS*ETPAGHRQSWH Trigger: ATGCCAAGATTGCCTGTGCCCAGCTGGGGTTTCCCAGCTATGTGAGCTCAGACCACCTAAGAGTGGATGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | TCAGGGACACAAGACCCACCTGGACAGTCCAGGACTTaGGGTGGTACAGGTCATAAACACAGTGTGCCGCAG | + |
Preference number: 6 (lower is better) Translates to: SGTQDPPGQSRT*GGTGHKHSVPQ Trigger: CTGCGGCACACTGTGTTTATGACCTGTACCACCCCAAGTCCTGGACTGTCCAGGTGGGTCTTGTGTCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | TTCTCCCCCATGGTGACTATCTCAGGGCCTCTGATGTaGGGTTCCGGCTCCACCTCCACCATTTCTGAAGCG | + |
Preference number: 6 (lower is better) Translates to: FSPMVTISGPLM*GSGSTSTISEA Trigger: CGCTTCAGAAATGGTGGAGGTGGAGCCGGAACCCAACATCAGAGGCCCTGAGATAGTCACCATGGGGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114549.4 |
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CDS CAA 90 bp | CCTGAGGTCCAGCACAGTTTCCCATCGGGAAAGTTCTCTTCAGAGTaGGGCAGACAGATGGGCTGGATGGTCTCGTCAAAGGTGAGTGGC | + |
Preference number: 6 (lower is better) Translates to: PEVQHSFPSGKFSSE*GRQMGWMVSSKVSG Trigger: GCCACTCACCTTTGACGAGACCATCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACTTTCCCGATGGGAAACTGTGCTGGACCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 72 bp | CCAGGACTTGGGGTGGTACAGGTCATAAACACAGTGTaGCGCAGTGACGATCCACAGAGGGGTGATGATGGA | + |
Preference number: 6 (lower is better) Translates to: PGLGVVQVINTV*RSDDPQRGDDG Trigger: TCCATCATCACCCCTCTGTGGATCGTCACTGCGGCACACTGTGTTTATGACCTGTACCACCCCAAGTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | CATAGCTGGGAAACCCCAGCTGGGCACAGGCAATCTTaGCATAGTGGCTTTTCCAGTCATCGGAGCACATGG | + |
Preference number: 6 (lower is better) Translates to: HSWETPAGHRQS*HSGFSSHRSTW Trigger: CCATGTGCTCCGATGACTGGAAAAGCCACTATGCCAAGATTGCCTGTGCCCAGCTGGGGTTTCCCAGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | TGGCCTGAGGTGCAGCCTTCCCTCATGTACACAGAGTaGTGTAACGCCGTCACCTTGTCATCTGACAAGAGG | + |
Preference number: 6 (lower is better) Translates to: WPEVQPSLMYTE*CNAVTLSSDKR Trigger: CCTCTTGTCAGATGACAAGGTGACGGCGTTACACCACTCTGTGTACATGAGGGAAGGCTGCACCTCAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | GGAAAGTTCTCTTCAGAGTTGGGCAGACAGATGGGCTaGATGGTCTCGTCAAAGGTGAGTGGCTCGGACAGC | + |
Preference number: 6 (lower is better) Translates to: GKFSSELGRQMG*MVSSKVSGSDS Trigger: GCTGTCCGAGCCACTCACCTTTGACGAGACCATCCAGCCCATCTGTCTGCCCAACTCTGAAGAGAACTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 72 bp | GTAACGCCGTCACCTTGTCATCTGACAAGAGGTGATTaGTGGACACGAAGTCGCCCTGGAACTGCTCCTCCA | + |
Preference number: 6 (lower is better) Translates to: VTPSPCHLTRGD*WTRSRPGTAPP Trigger: TGGAGGAGCAGTTCCAGGGCGACTTCGTGTCCATCAATCACCTCTTGTCAGATGACAAGGTGACGGCGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 72 bp | TGGTGTAACGCCGTCACCTTGTCATCTGACAAGAGGTaGTTGATGGACACGAAGTCGCCCTGGAACTGCTCC | + |
Preference number: 6 (lower is better) Translates to: WCNAVTLSSDKR*LMDTKSPWNCS Trigger: GGAGCAGTTCCAGGGCGACTTCGTGTCCATCAATCACCTCTTGTCAGATGACAAGGTGACGGCGTTACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | GGGCAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTaGTGCCACAGGACTTATTTTCAAATCATCCAAGCC | + |
Preference number: 6 (lower is better) Translates to: GQKGQDLRSHCV*CHRTYFQIIQA Trigger: GGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS CAA 90 bp | AGACTCCAGGCTTGTTCACTTCAGCACAGCCGATTCCAAAACTTGTaGCACCCACTAACTTCCACAGTCTCCTCTCCTGGCACACCAGGG | + |
Preference number: 6 (lower is better) Translates to: RLQACSLQHSRFQNL*HPLTSTVSSPGTPG Trigger: CCCTGGTGTGCCAGGAGAGGAGACTGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCTGTGCTGAAGTGAACAAGCCTGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS TCA 72 bp | TGCCCAGCCGCTTTGGCTTGTACTTGCTGTGATAGATaGTTTTCTCCACCAGATGGGAGGGCACAGGACTGT | + |
Preference number: 6 (lower is better) Translates to: CPAALACTCCDR*FSPPDGRAQDC Trigger: ACAGTCCTGTGCCCTCCCATCTGGTGGAGAAAATCATCTATCACAGCAAGTACAAGCCAAAGCGGCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 72 bp | CTTCAAGGGCAGAAGGGACAAGATCTGCGCAGCCACTaGGTCTCCATCTGGTGCCACAGGACTTATTTTCAA | + |
Preference number: 6 (lower is better) Translates to: LQGQKGQDLRSH*VSIWCHRTYFQ Trigger: TTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCCTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS CCA 72 bp | TTGCAGATCTTGTTTGAAATTAAAGGGACAGCCGCGTaGTTCAGGACAGGGGAGGCGTCACCTCCATCCTCT | + |
Preference number: 6 (lower is better) Translates to: LQILFEIKGTAA*FRTGEASPPSS Trigger: AGAGGATGGAGGTGACGCCTCCCCTGTCCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | GAGGGAGAGATGATACCACCATACACGTCCCTGTGGTTGCAGATCTaGTTTGAAATTAAAGGGACAGCCGCGTGGTTCAGGACAGGGGAG | + |
Preference number: 6 (lower is better) Translates to: EGEMIPPYTSLWLQI*FEIKGTAAWFRTGE Trigger: CTCCCCTGTCCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCATCTCTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | TTGCAGTCGGAGACCCCGTCGCATCGAGCTGTTAGTTCAATACACTaGAAAGATGAATGGCACCTGTACTTCCCAGAGCAGTCGAAGTGG | + |
Preference number: 6 (lower is better) Translates to: LQSETPSHRAVSSIH*KDEWHLYFPEQSKW Trigger: CCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAACAGCTCGATGCGACGGGGTCTCCGACTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | CAGAGCATGGAGGGAGAGATGATACCACCATACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATTAAAGGGACAGCCGCGTGGTTCAGG | + |
Preference number: 6 (lower is better) Translates to: QSMEGEMIPPYTSLW*QILFEIKGTAAWFR Trigger: CCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCATCTCTCCCTCCATGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS GCA 72 bp | GGACAAGATCTGCGCAGCCACTGCGTCTCCATCTGGTaGCACAGGACTTATTTTCAAATCATCCAAGCCGAA | + |
Preference number: 6 (lower is better) Translates to: GQDLRSHCVSIW*HRTYFQIIQAE Trigger: TTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGATGGAGACGCAGTGGCTGCGCAGATCTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 |
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CDS GCA 72 bp | CAGAAGGGACAAGATCTGCGCAGCCACTGCGTCTGGTaGCACAGGACTTATTTTCAAATCATCCAAGCCGAA | + |
Preference number: 6 (lower is better) Translates to: QKGQDLRSHCVW*HRTYFQIIQAE Trigger: TTCGGCTTGGATGATTTGAAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS GCA 72 bp | CTTCAAGGGCAGAAGGGACAAGATCTGCGCAGCCACTaGGTCTGGTGCCACAGGACTTATTTTCAAATCATC | + |
Preference number: 6 (lower is better) Translates to: LQGQKGQDLRSH*VWCHRTYFQII Trigger: GATGATTTGAAAATAAGTCCTGTGGCACCAGACGCAGTGGCTGCGCAGATCTTGTCCCTTCTGCCCTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237740.2 |
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CDS CAA 72 bp | GCTTGTTCACTTCAGCACAGCCGATTCCAAAACTTGTaGCACCCACTAACTTCCACAGTCTCCTCTCCTGGC | + |
Preference number: 6 (lower is better) Translates to: ACSLQHSRFQNL*HPLTSTVSSPG Trigger: GCCAGGAGAGGAGACTGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCTGTGCTGAAGTGAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 90 bp | TATAGACTCCAGGCTTGTTCACTTCAGCACAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCCACAGTCTCCTCTCCTGGCACACCA | + |
Preference number: 6 (lower is better) Translates to: YRLQACSLQHSRFQN*LHPLTSTVSSPGTP Trigger: TGGTGTGCCAGGAGAGGAGACTGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCTGTGCTGAAGTGAACAAGCCTGGAGTCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | GAGACCCCGTCGCATCGAGCTGTTAGTTCAATACACTaGAAAGATGAATGGCACCTGTACTTCCCAGAGCAG | + |
Preference number: 6 (lower is better) Translates to: ETPSHRAVSSIH*KDEWHLYFPEQ Trigger: CTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAACAGCTCGATGCGACGGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | TACCACCATACACGTCCCTGTGGTTGCAGATCTTGTTaGAAATTAAAGGGACAGCCGCGTGGTTCAGGACAG | + |
Preference number: 6 (lower is better) Translates to: YHHTRPCGCRSC*KLKGQPRGSGQ Trigger: CTGTCCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | GAGGGAGAGATGATACCACCATACACGTCCCTGTGGTaGCAGATCTTGTTTGAAATTAAAGGGACAGCCGCG | + |
Preference number: 6 (lower is better) Translates to: EGEMIPPYTSLW*QILFEIKGTAA Trigger: CGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCATCTCTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | CAGGCTTGTTCACTTCAGCACAGCCGATTCCAAAACTaGTTGCACCCACTAACTTCCACAGTCTCCTCTCCT | + |
Preference number: 6 (lower is better) Translates to: QACSLQHSRFQN*LHPLTSTVSSP Trigger: AGGAGAGGAGACTGTGGAAGTTAGTGGGTGCAACAAGTTTTGGAATCGGCTGTGCTGAAGTGAACAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | CAGCTTCATGAGGGCTATGTCATTGCCCAGCCGCTTTaGCTTGTACTTGCTGTGATAGATGATTTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: QLHEGYVIAQPL*LVLAVIDDFLH Trigger: GTGGAGAAAATCATCTATCACAGCAAGTACAAGCCAAAGCGGCTGGGCAATGACATAGCCCTCATGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CAA 72 bp | ATGATACCACCATACACGTCCCTGTGGTTGCAGATCTaGTTTGAAATTAAAGGGACAGCCGCGTGGTTCAGG | + |
Preference number: 6 (lower is better) Translates to: MIPPYTSLWLQI*FEIKGTAAWFR Trigger: CCTGAACCACGCGGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | ATGGAGGGAGAGATGATACCACCATACACGTCCCTGTaGTTGCAGATCTTGTTTGAAATTAAAGGGACAGCC | + |
Preference number: 6 (lower is better) Translates to: MEGEMIPPYTSL*LQILFEIKGTA Trigger: GGCTGTCCCTTTAATTTCAAACAAGATCTGCAACCACAGGGACGTGTATGGTGGTATCATCTCTCCCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |
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CDS CCA 72 bp | CATCGAGCTGTTAGTTCAATACACTTGAAAGATGAATaGCACCTGTACTTCCCAGAGCAGTCGAAGTGGATG | + |
Preference number: 6 (lower is better) Translates to: HRAVSSIHLKDE*HLYFPEQSKWM Trigger: CATCCACTTCGACTGCTCTGGGAAGTACAGGTGCCATTCATCTTTCAAGTGTATTGAACTAACAGCTCGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024833.13 ENSMUST00000114549.4 ENSMUST00000236793.2 ENSMUST00000237740.2 |