Pregenerated sensors for TMPRSS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000385Ensembl transcript IDs: ENSMUST00000000395.8, ENSMUST00000231544.2, ENSMUST00000232141.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCCTATGTGCCCAAACCCAACAGAATCTGGTCATCCATTCTGGTaGGAGCTGCAGAAGTGGCCCAGGGGTGGGGCACTGAAGCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: GPMCPNPTESGHPFW*ELQKWPRGGALKPS Trigger: TGAGGGCTTCAGTGCCCCACCCCTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGGGCACATAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | ATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGGGGTaGGGCACTGAAGCCCTCACAGGACCAGGGAGCACAGTCAAACAA | + |
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Preference number: 1 (lower is better) Translates to: IWSSILVGAAEVAQG*GTEALTGPGSTVKQ Trigger: TTGTTTGACTGTGCTCCCTGGTCCTGTGAGGGCTTCAGTGCCCCACCCCTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | TTTGGCCCTATGTGCCCAAACCCAACAGAATCTGGTCATCCATTCTaGTGGGAGCTGCAGAAGTGGCCCAGGGGTGGGGCACTGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: FGPMCPNPTESGHPF*WELQKWPRGGALKP Trigger: GGGCTTCAGTGCCCCACCCCTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGGGCACATAGGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | AGGCCACAGGCAATGGGTAGCTCTCACTCTCAAGGTACCTGTTCCTaGGCCCAAGGCCCTGCCTGGCCTCCTTACTCTTTCTCAGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: RPQAMGSSHSQGTCS*AQGPAWPPYSFSGH Trigger: ATGACCTGAGAAAGAGTAAGGAGGCCAGGCAGGGCCTTGGGCCCAGGAACAGGTACCTTGAGAGTGAGAGCTACCCATTGCCTGTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | AGTATGACCAGCCCAACCTGCACAGCAGATTTAGGCCACAGGCAATaGGTAGCTCTCACTCTCAAGGTACCTGTTCCTGGGCCCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SMTSPTCTADLGHRQ*VALTLKVPVPGPKA Trigger: GGCCTTGGGCCCAGGAACAGGTACCTTGAGAGTGAGAGCTACCCATTGCCTGTGGCCTAAATCTGCTGTGCAGGTTGGGCTGGTCATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 90 bp | TTGGGAAAGCCTCCATCACCCTTGGAAAGGGCCGTCATGTCAACATaGAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LGKPPSPLERAVMST*RRASPLLPAMFTQA Trigger: AGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACATGACGGCCCTTTCCAAGGGTGATGGAGGCTTTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | AGCTCTCACTCTCAAGGTACCTGTTCCTGGGCCCAAGGCCCTGCCTaGCCTCCTTACTCTTTCTCAGGTCATCAGGTTACTCAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SSHSQGTCSWAQGPA*PPYSFSGHQVTQRS Trigger: TGACCTCTGAGTAACCTGATGACCTGAGAAAGAGTAAGGAGGCCAGGCAGGGCCTTGGGCCCAGGAACAGGTACCTTGAGAGTGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | AGAGATCTGCCTAGGCCCTTAGCTTGGGAAAGCCTCCATCACCCTTaGAAAGGGCCGTCATGTCAACATGCAGGAGAGCAAGCCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: RDLPRPLAWESLHHP*KGPSCQHAGEQALY Trigger: GTAAAGGGCTTGCTCTCCTGCATGTTGACATGACGGCCCTTTCCAAGGGTGATGGAGGCTTTCCCAAGCTAAGGGCCTAGGCAGATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 90 bp | GCCCAAAAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTaGCCCTATGTGCCCAAACCCAACAGAATCTGGTCATCCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: AQKKFQHESATLLCL*PYVPKPNRIWSSIL Trigger: CAGAATGGATGACCAGATTCTGTTGGGTTTGGGCACATAGGGCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 90 bp | GCCCTTTACTCCCAGCCATGTTCACCCAGGCTGTTAATGAAATCATaGCAGTATGACCAGCCCAACCTGCACAGCAGATTTAGGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: ALYSQPCSPRLLMKS*QYDQPNLHSRFRPQ Trigger: CTGTGGCCTAAATCTGCTGTGCAGGTTGGGCTGGTCATACTGTCATGATTTCATTAACAGCCTGGGTGAACATGGCTGGGAGTAAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 90 bp | TCTGAGAGGCTGAGAGAAACAGTAGTGGGGAGCCAAGAACCAGACTaGATAACACCATGTAGAGCTCACCCAAGGGACATGCCGGCATTA | + |
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Preference number: 1 (lower is better) Translates to: SERLRETVVGSQEPD*ITPCRAHPRDMPAL Trigger: TAATGCCGGCATGTCCCTTGGGTGAGCTCTACATGGTGTTATTCAGTCTGGTTCTTGGCTCCCCACTACTGTTTCTCTCAGCCTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 90 bp | CAAATGCAGGTGAACTCCAGACATTCATCCACTCTAGTGTCCAGGTaGAGTGAGGTAGTAAGAGAAGAAACACAACCCAGAAGCAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QMQVNSRHSSTLVSR*SEVVREETQPRSKV Trigger: CACCTTGCTTCTGGGTTGTGTTTCTTCTCTTACTACCTCACTGCACCTGGACACTAGAGTGGATGAATGTCTGGAGTTCACCTGCATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 90 bp | GGCTTTCCTGGTATAAACCCAGGGCCAGAAGAAGACAGAAGACAATaGTCTCCTCTCTTTCATCTTTATCTGAAGCTAGGAACTTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: GFPGINPGPEEDRRQ*SPLFHLYLKLGTSN Trigger: ATTAGAAGTTCCTAGCTTCAGATAAAGATGAAAGAGAGGAGATCATTGTCTTCTGTCTTCTTCTGGCCCTGGGTTTATACCAGGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGTGGGAGCTGCAGAAGTaGCCCAGGGGTGGGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: CQHAGEQALYSQPCSPRLWELQK*PRGGAL Trigger: CAGTGCCCCACCCCTGGGCCACTTCTGCAGCTCCCA...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGGAAGTGGCCCAGGGGTaGGGCACTGAAGCCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: CQHAGEQALYSQPCSPRLEVAQG*GTEALT Trigger: TGTGAGGGCTTCAGTGCCCCACCCCTGGGCCACTTC...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGAAGGAGGCAGAGCCTCACCGTGGGTAAGACATTCATACTTCATATTTCAAGGTACCTGTTCCTaGGCCCAAGGCCCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QREGGRASPWVRHSYFIFQGTCS*AQGPAW Trigger: CCAGGCAGGGCCTTGGGCCCAGGAACAGGTACCTTG...AAATATGAAGTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACCAGGCAGAGAGAAGGAGGCAGAGCCTCACCGTGGGTAAGACATTCATACCTTGCAGAAGGTTGTTaGAGACAAAGGAAGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RTRQREGGRASPWVRHSYLAEGC*RQRKSG Trigger: CCCAGACTTCCTTTGTCTTCAACAACCTTCTGCAAG...GTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTGCCTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGGGCCCTTGGTTTTCTTaGAGAAGGTTGTTGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: CQHAGEQALYSQPCSPRLGPWFS*RRLLKT Trigger: TGTCTTCAACAACCTTCTGCAAGAAAACCAAGGGCC...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGGACAGGTTCTCACACTTCAAGGTGCTTGCACATTTAGTCTGTATGTAGGTCATCCATTCTGGTaGGAGCTGCAGAAGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RRGQVLTLQGACTFSLYVGHPFW*ELQKWP Trigger: GGGCCACTTCTGCAGCTCCCACCAGAATGGATGACC...TACATACAGACTAAATGTGCAAGCACCTTGAAGTGTGAGAACCTGTCCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR TCA 90 bp | GTTATGACCCATTCACTGCCTTCTGAAGAACCAGGCAGAGAGAAGGAGGCAGAGCTGTTAATGAAATCATaGCAGTATGACCAGCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VMTHSLPSEEPGREKEAELLMKS*QYDQPN Trigger: GTTGGGCTGGTCATACTGTCATGATTTCATTAACAG...CTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTAGTGTCTGAGGCACAATCACACAGTCCAAATGCAGGTGAACTCCAGACAAGCCAAGAACCAGACTaGATAACACCATGTAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLVSEAQSHSPNAGELQTSQEPD*ITPCRA Trigger: AGCTCTACATGGTGTTATTCAGTCTGGTTCTTGGCT...TGTCTGGAGTTCACCTGCATTTGGACTGTGTGATTGTGCCTCAGACACTAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAAGACAATGATCTCCTCTCTTTCATCTTTATCTGAAGCTAGGAACTTCCTGGGCCCAAGGCCCTaGCTGGCCTCCTTACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RQKTMISSLSSLSEARNFLGPRP*LASLLF Trigger: AAAGAGTAAGGAGGCCAGGCAGGGCCTTGGGCCCAG...GAAGTTCCTAGCTTCAGATAAAGATGAAAGAGAGGAGATCATTGTCTTCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR TCA 90 bp | AATCACACAGTCCAAATGCAGGTGAACTCCAGACATTCATCCACTCTAGTGTCCGTAAGTTTCAGGCTCTaGGAGGCTGAGAGAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: NHTVQMQVNSRHSSTLVSVSFRL*EAERNS Trigger: ACTGTTTCTCTCAGCCTCTCAGAGCCTGAAACTTAC...GGACACTAGAGTGGATGAATGTCTGGAGTTCACCTGCATTTGGACTGTGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CAA 90 bp | AGGTACATTGTGCACAGGAAGTTAAAATTCAGGCCCTTGGTTTTCTaGCAGAAGGTTGTTGAAGACAAAGGAAGTCTGGGACAAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RYIVHRKLKFRPLVF*QKVVEDKGSLGQSH Trigger: GTGGCTTTGTCCCAGACTTCCTTTGTCTTCAACAACCTTCTGCAAGAAAACCAAGGGCCTGAATTTTAACTTCCTGTGCACAATGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | GAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTaGCCCAGGGGTGGGGCACTGAAGCCCTCACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ESGHPFWWELQK*PRGGALKPSQD Trigger: GTCCTGTGAGGGCTTCAGTGCCCCACCCCTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACCAGGCAGAGAGAAGGAGGCAGAGCCTCACCGTGGGTAAGACATTCATACCACCCTCCTCTGCCTTaGGCCCTATGTGCCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: RTRQREGGRASPWVRHSYHPPLP*ALCAQT Trigger: GGTTTGGGCACATAGGGCCAAAGGCAGAGGAGGGTG...GTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTGCCTGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 72 bp | TCACTCTCAAGGTACCTGTTCCTGGGCCCAAGGCCCTaGCTGGCCTCCTTACTCTTTCTCAGGTCATCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SLSRYLFLGPRP*LASLLFLRSSG Trigger: ACCTGATGACCTGAGAAAGAGTAAGGAGGCCAGGCAGGGCCTTGGGCCCAGGAACAGGTACCTTGAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | TGCCTTTGGCCCTATGTGCCCAAACCCAACAGAATCTaGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: CLWPYVPKPNRI*SSILVGAAEVA Trigger: GGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGGGCACATAGGGCCAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | TCTCAAGGTACCTGTTCCTGGGCCCAAGGCCCTGCCTaGCCTCCTTACTCTTTCTCAGGTCATCAGGTTACT | + |
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Preference number: 3 (lower is better) Translates to: SQGTCSWAQGPA*PPYSFSGHQVT Trigger: AGTAACCTGATGACCTGAGAAAGAGTAAGGAGGCCAGGCAGGGCCTTGGGCCCAGGAACAGGTACCTTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | AGCCCAACCTGCACAGCAGATTTAGGCCACAGGCAATaGGTAGCTCTCACTCTCAAGGTACCTGTTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SPTCTADLGHRQ*VALTLKVPVPG Trigger: CCCAGGAACAGGTACCTTGAGAGTGAGAGCTACCCATTGCCTGTGGCCTAAATCTGCTGTGCAGGTTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | CCTAGGCCCTTAGCTTGGGAAAGCCTCCATCACCCTTaGAAAGGGCCGTCATGTCAACATGCAGGAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PRPLAWESLHHP*KGPSCQHAGEQ Trigger: TTGCTCTCCTGCATGTTGACATGACGGCCCTTTCCAAGGGTGATGGAGGCTTTCCCAAGCTAAGGGCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | AGATGGAGTCCCAGTTATGACCCATTCACTGCCTTCTaGAGAACCAGGCAGAGAGAAGGAGGCAGAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RWSPSYDPFTAF*RTRQREGGRAS Trigger: TGAGGCTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAACTGGGACTCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | GGGAGACTTTCCCCAGCAAAGATGGAGTCCCAGTTATaGCCCATTCACTGCCTTCTGAAGAACCAGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: GRLSPAKMESQL*PIHCLLKNQAE Trigger: CTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAACTGGGACTCCATCTTTGCTGGGGAAAGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | AAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTaGCCCTATGTGCCCAAACCCAACAGAATCTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: KFQHESATLLCL*PYVPKPNRIWS Trigger: TGACCAGATTCTGTTGGGTTTGGGCACATAGGGCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAACCCAACAGAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGGCCCTTGGTTTTCTaGCAGAAGGTTGTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PNPTESGHPFWWELQKWPRPLVF*QKVVED Trigger: GTCTTCAACAACCTTCTGCAAGAAAACCAAGGGCCT...GGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTGGCCCTATGTGCCCTCTTGCAGAAGGTTGTaGAAGACAAAGGAAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: KKFQHESATLLCLWPYVPSCRRL*KTKEVW Trigger: CCAGACTTCCTTTGTCTTCAACAACCTTCTGCAAGA...GGGCACATAGGGCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 72 bp | CAAAAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTaGCTTTGGCCCTATGTGCCCAAACCCAACAGAATC | + |
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Preference number: 3 (lower is better) Translates to: QKKFQHESATLL*LWPYVPKPNRI Trigger: GATTCTGTTGGGTTTGGGCACATAGGGCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | AGGTCCCAGAGGACGCATGAGGGAGTTTTCTTTACATaGAGTGGTAACCATTCCCTAGGTGGGAGACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RSQRTHEGVFFT*SGNHSLGGRLS Trigger: GGAAAGTCTCCCACCTAGGGAATGGTTACCACTCCATGTAAAGAAAACTCCCTCATGCGTCCTCTGGGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | CTGAGAGAAACAGTAGTGGGGAGCCAAGAACCAGACTaGATAACACCATGTAGAGCTCACCCAAGGGACATG | + |
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Preference number: 3 (lower is better) Translates to: LRETVVGSQEPD*ITPCRAHPRDM Trigger: CATGTCCCTTGGGTGAGCTCTACATGGTGTTATTCAGTCTGGTTCTTGGCTCCCCACTACTGTTTCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | TCCCAGCCATGTTCACCCAGGCTGTTAATGAAATCATaGCAGTATGACCAGCCCAACCTGCACAGCAGATTT | + |
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Preference number: 3 (lower is better) Translates to: SQPCSPRLLMKS*QYDQPNLHSRF Trigger: AAATCTGCTGTGCAGGTTGGGCTGGTCATACTGTCATGATTTCATTAACAGCCTGGGTGAACATGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 72 bp | GTGAACTCCAGACATTCATCCACTCTAGTGTCCAGGTaGAGTGAGGTAGTAAGAGAAGAAACACAACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VNSRHSSTLVSR*SEVVREETQPR Trigger: TCTGGGTTGTGTTTCTTCTCTTACTACCTCACTGCACCTGGACACTAGAGTGGATGAATGTCTGGAGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | AAAATTCAGGCCCTTGGTTTTCTTGCAGAAGGTTGTTaGAGACAAAGGAAGTCTGGGACAAAGCCACGTGGA | + |
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Preference number: 3 (lower is better) Translates to: KIQALGFLAEGC*RQRKSGTKPRG Trigger: TCCACGTGGCTTTGTCCCAGACTTCCTTTGTCTTCAACAACCTTCTGCAAGAAAACCAAGGGCCTGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR TCA 72 bp | AGTAAGAGAAGAAACACAACCCAGAAGCAAGGTGACTaGAATCACAAGTCCCTGATTCTGATGGACCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: SKRRNTTQKQGD*NHKSLILMDLS Trigger: GCTCAGGTCCATCAGAATCAGGGACTTGTGATTTCAGTCACCTTGCTTCTGGGTTGTGTTTCTTCTCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR GCA 72 bp | CTAAGGAGGGGACAGGTTCTCACACTTCAAGGTGCTTaGACATTTAGTCTGTATGTAGGTACCTTACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LRRGQVLTLQGA*TFSLYVGTLQH Trigger: ATGCTGTAAGGTACCTACATACAGACTAAATGTGCAAGCACCTTGAAGTGTGAGAACCTGTCCCCTCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | AGAACCAGGCAGAGAGAAGGAGGCAGAGCCTCACCGTaGGTAAGACATTCATACTTCATATTTGGTAATTCT | + |
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Preference number: 3 (lower is better) Translates to: RTRQREGGRASP*VRHSYFIFGNS Trigger: AGAATTACCAAATATGAAGTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTGCCTGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CCA 72 bp | CATACTTCATATTTGGTAATTCTGGCATGGCTTTCCTaGTATAAACCCAGGGCCAGAAGAAGACAGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: HTSYLVILAWLS*YKPRARRRQKT Trigger: TGTCTTCTGTCTTCTTCTGGCCCTGGGTTTATACCAGGAAAGCCATGCCAGAATTACCAAATATGAAGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | CTTCTTGCTCTGAGAGATCTGCCTAGGCCCTTAGCTTGGGAAAGCCTCCATCACCCACAGCAGCTCCCGTaGGGACAGTGCCCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LLALRDLPRPLAWESLHHPQQLP*GQCPGR Trigger: TCGCCCTGGGCACTGTCCTCACGGGAGCTGCTGTGG...GTGATGGAGGCTTTCCCAAGCTAAGGGCCTAGGCAGATCTCTCAGAGCAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR GCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGTGGACGCCTTGGACGTaGAGGCTGACCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: CQHAGEQALYSQPCSPRLWTPWT*RLTCQG Trigger: GCCCTGGCAGGTCAGCCTGCACGTCCAAGGCGTCCA...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR GCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGACGTGCAGGCTGACCTaGCAGGGCCAGTCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQHAGEQALYSQPCSPRLTCRLT*QGQSPG Trigger: ACCAGGAGACTGGCCCTGGCAGGTCAGCCTGCACGT...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | TGTCAACATGCAGGAGAGCAAGCCCTTTACTCCCAGCCATGTTCACCCAGGCTGCGTATACTCCAGGTCTaGGTGCCTTGGCACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CQHAGEQALYSQPCSPRLRILQV*VPWHSP Trigger: CGGGCTGTGCCAAGGCACTCAGACCTGGAGTATACG...CAGCCTGGGTGAACATGGCTGGGAGTAAAGGGCTTGCTCTCCTGCATGTTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | CATGAGCCCAAAAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTGGCATTGGGAGCCACTGGTaGTCTCGGAGGACAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HEPKRSSNMRVPPSSAFGIGSHW*SRRTDV Trigger: CACATCTGTCCTCCGAGACCACCAGTGGCTCCCAAT...GCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTTTTGGGCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAAGGAGGCAGAGCCTCACCGTGGGTAAGACATTCATACTTCATATTTGAGCCTCCGCAGACGTaGACGCCTTGGACGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QREGGRASPWVRHSYFIFEPPQT*TPWTCR Trigger: CCTGCACGTCCAAGGCGTCCACGTCTGCGGAGGCTC...AAATATGAAGTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | AAACCCAACAGAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGACCAGAGAGAAGAGCTaGTGCATGTGCCTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPNRIWSSILVGAAEVAQTREKS*CMCLKT Trigger: GGTCTTCAGGCACATGCATCAGCTCTTCTCTCTGGT...CTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | AAACCCAACAGAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGCTGAGGCACTGGAGATaGGTAGTACTGGGCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KPNRIWSSILVGAAEVAQLRHWR*VVLGWI Trigger: TATCCAGCCCAGTACTACCCATCTCCAGTGCCTCAG...CTGGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | AAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTGGCCCTATGTGCCCTCTCATCTTCTCCGTTaGGACAATGTGCTACCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KKFQHESATLLCLWPYVPSHLLR*DNVLPR Trigger: ACGGGGTAGCACATTGTCCCAACGGAGAAGATGAGA...GGGCACATAGGGCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | GTTATGACCCATTCACTGCCTTCTGAAGAACCAGGCAGAGAGAAGGAGGCAGAGTGGGATGTGTGTGGATaGCAGATGTTGAGGCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VMTHSLPSEEPGREKEAEWDVCG*QMLRLA Trigger: CGCAAGCCTCAACATCTGTCATCCACACACATCCCA...CTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | GTTATGACCCATTCACTGCCTTCTGAAGAACCAGGCAGAGAGAAGGAGGCAGAGGAGGTCAACGTTGCCTaGGCTCACATTCAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VMTHSLPSEEPGREKEAEEVNVA*AHIQLH Trigger: ATGAAGCTGAATGTGAGCTCAGGCAACGTTGACCTC...CTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTGTCTGAGGCACAATCACACAGTCCAAATGCAGGTGAACTCCAGACAATCCACCCACAATCCTaGTCTGGCGTTTCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVSEAQSHSPNAGELQTIHPQS*SGVSLS Trigger: GCTCAGTGAAACGCCAGAGCAGGATTGTGGGTGGAT...TGTCTGGAGTTCACCTGCATTTGGACTGTGTGATTGTGCCTCAGACACTAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGGACAGGTTCTCACACTTCAAGGTGCTTGCACATTTAGTCTGTATGTAGCCATTGGGAGCCACTaGTGGTCTCGGAGGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGQVLTLQGACTFSLYVAIGSH*WSRRTD Trigger: ATCTGTCCTCCGAGACCACCAGTGGCTCCCAATGGC...TACATACAGACTAAATGTGCAAGCACCTTGAAGTGTGAGAACCTGTCCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGGACAGGTTCTCACACTTCAAGGTGCTTGCACATTTAGTCTGTATGTAGCTGATGCATGTGCCTaGAGACCCACACTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGQVLTLQGACTFSLYVADACA*RPTLHL Trigger: GAGATGGAGTGTGGGTCTTCAGGCACATGCATCAGC...TACATACAGACTAAATGTGCAAGCACCTTGAAGTGTGAGAACCTGTCCCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR TCA 90 bp | GTTATGACCCATTCACTGCCTTCTGAAGAACCAGGCAGAGAGAAGGAGGCAGAGGGCTTTCCTCTGAGATaGGTAAACCTGGAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VMTHSLPSEEPGREKEAEGFPLR*VNLEDE Trigger: TTCATCCTCCAGGTTTACTCATCTCAGAGGAAAGCC...CTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGTGTCTGAGGCACAATCACACAGTCCAAATGCAGGTGAACTCCAGACATCCCATGTCTTTACATaGTGCTCTCCCGTAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVSEAQSHSPNAGELQTSHVFT*CSPVAL Trigger: GAGAGCTACGGGAGAGCAGCATGTAAAGACATGGGA...TGTCTGGAGTTCACCTGCATTTGGACTGTGTGATTGTGCCTCAGACACTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCAGGCAGAGAGAAGGAGGCAGAGCCTCACCGTGGGTAAGACATTCATACTATAGAGGTCAACGTTaGCTGAGCTCACATTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRQREGGRASPWVRHSYYRGQR*LSSHSA Trigger: AGCTGAATGTGAGCTCAGGCAACGTTGACCTCTATA...GTATGAATGTCTTACCCACGGTGAGGCTCTGCCTCCTTCTCTCTGCCTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | GTTATGACCCATTCACTGCCTTCTGAAGAACCAGGCAGAGAGAAGGAGGCAGAGGTGTCTGCAGCTTCATaGGAGCAATGTCGTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMTHSLPSEEPGREKEAEVSAAS*EQCRYS Trigger: AGAATAACGACATTGCTCTCATGAAGCTGCAGACAC...CTCTGCCTCCTTCTCTCTGCCTGGTTCTTCAGAAGGCAGTGAATGGGTCATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | CCAAACCCAACAGAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGATCATGGCTGGTGTaGTTAGGTTGTTGTATATGT | + |
|
Preference number: 4 (lower is better) Translates to: PNPTESGHPFWWELQKWPRSWLV*LGCCIC Trigger: ACATATACAACAACCTAATCACACCAGCCATGATCT...GGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | AAGTCACTGTTTAATAAAAGTGAAAGGCCCTTCGAATCATCTCAAAAGGTACATCAGACGTGGACGCCTTaGACGTGCAGGCTGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSLFNKSERPFESSQKVHQTWTP*TCRLTC Trigger: GCAGGTCAGCCTGCACGTCCAAGGCGTCCACGTCTG...ATGTACCTTTTGAGATGATTCGAAGGGCCTTTCACTTTTATTAAACAGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR GCA 90 bp | AGGGGACAGGTTCTCACACTTCAAGGTGCTTGCACATTTAGTCTGTATGTAGGTAAAGCCAAAGGTGTCTaGAGCTTCATGAGAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RGQVLTLQGACTFSLYVGKAKGV*SFMRAM Trigger: CATTGCTCTCATGAAGCTGCAGACACCTTTGGCTTT...ACCTACATACAGACTAAATGTGCAAGCACCTTGAAGTGTGAGAACCTGTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CCA 90 bp | AAGTCACTGTTTAATAAAAGTGAAAGGCCCTTCGAATCATCTCAAAAGGTACATGAGTCGACAGACCCCTaGAGGAAGCCGGCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KSLFNKSERPFESSQKVHESTDP*RKPAQI Trigger: GATCTGTGCCGGCTTCCTCCAGGGGTCTGTCGACTC...ATGTACCTTTTGAGATGATTCGAAGGGCCTTTCACTTTTATTAAACAGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| 3UTR CAA 72 bp | GTGCACAGGAAGTTAAAATTCAGGCCCTTGGTTTTCTaGCAGAAGGTTGTTGAAGACAAAGGAAGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHRKLKFRPLVF*QKVVEDKGSLG Trigger: TCCCAGACTTCCTTTGTCTTCAACAACCTTCTGCAAGAAAACCAAGGGCCTGAATTTTAACTTCCTGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR GCA 90 bp | AGACAGAAGACAATGATCTCCTCTCTTTCATCTTTATCTGAAGCTAGGAACTTCACAGATGTTGAGGCTTaGGTTGTAATCCTCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQKTMISSLSSLSEARNFTDVEA*VVILGA Trigger: TGCTCCGAGGATTACAACGCAAGCCTCAACATCTGT...GAAGTTCCTAGCTTCAGATAAAGATGAAAGAGAGGAGATCATTGTCTTCTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR TCA 90 bp | AGACAGAAGACAATGATCTCCTCTCTTTCATCTTTATCTGAAGCTAGGAACTTCTACTTCCATAGAACATaGGAGACTGTCTCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKTMISSLSSLSEARNFYFHRT*ETVSEF Trigger: GAATTCTGAGACAGTCTCTCATGTTCTATGGAAGTA...GAAGTTCCTAGCTTCAGATAAAGATGAAAGAGAGGAGATCATTGTCTTCTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 90 bp | AATGCCGTCCAGTACCTCGGGCTGCTGAGGGGTTCTTCCACACAGTaGGCGGCCGTCACAATCCACTCGGGGGTGATGATGGAGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NAVQYLGLLRGSSTQ*AAVTIHSGVMMEPP Trigger: CGGAGGCTCCATCATCACCCCCGAGTGGATTGTGACGGCCGCCCACTGTGTGGAAGAACCCCTCAGCAGCCCGAGGTACTGGACGGCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS GCA 90 bp | CCAATCTGTAAATACCGTCACGTTCCCGTATACTCCAGGTCTGAGTaGCTTGGCACAGCCCGAGCCCCAGCTCGTGTCCCCAATCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PICKYRHVPVYSRSE*LGTARAPARVPNQP Trigger: TGGCTGATTGGGGACACGAGCTGGGGCTCGGGCTGTGCCAAGGCACTCAGACCTGGAGTATACGGGAACGTGACGGTATTTACAGATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 90 bp | TGGGTAGTACTGGGCTGGATACAAGTTGTAGCCATTGGGAGCCACTaGTGGTCTCGGAGGACAGATGTGCTCAGACTGATACCCGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WVVLGWIQVVAIGSH*WSRRTDVLRLIPVV Trigger: AACCACGGGTATCAGTCTGAGCACATCTGTCCTCCGAGACCACCAGTGGCTCCCAATGGCTACAACTTGTATCCAGCCCAGTACTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
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| CDS-3UTR CAA 90 bp | CCAAACCCAACAGAATCTGGTCATCCATTCTGGTGGGAGCTGCAGAAGTGGCCCAGTGCTCCTGAGGACTaGGGATGTGTGTGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PNPTESGHPFWWELQKWPSAPED*GCVWMT Trigger: TGTCATCCACACACATCCCAAGTCCTCAGGAGCACT...GGGCCACTTCTGCAGCTCCCACCAGAATGGATGACCAGATTCTGTTGGGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS GCA 90 bp | TCTACTTCCATAGAACATGAGAGACTGTCTCAGAATTCCCGCAAATaGCGTCCAGTACCTCGGGCTGCTGAGGGGTTCTTCCACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: STSIEHERLSQNSRK*RPVPRAAEGFFHTV Trigger: CACTGTGTGGAAGAACCCCTCAGCAGCCCGAGGTACTGGACGGCATTTGCGGGAATTCTGAGACAGTCTCTCATGTTCTATGGAAGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS-3UTR CAA 90 bp | CATGAGCCCAAAAGAAGTTCCAACATGAGAGTGCCACCCTCCTCTGCCTTTGGCTCAGACGTAGAACAGTaGCTGTCCCAGAACCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HEPKRSSNMRVPPSSAFGSDVEQ*LSQNLQ Trigger: TTGGAGGTTCTGGGACAGCAACTGTTCTACGTCTGA...GCCAAAGGCAGAGGAGGGTGGCACTCTCATGTTGGAACTTCTTTTGGGCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS TCA 90 bp | ACTCCAATCATCCTGGCACACGGGATACCAGGCTTTCCTCTGAGATaGGTAAACCTGGAGGATGAAGCTTTGTCCGTAGAGACGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: TPIILAHGIPGFPLR*VNLEDEALSVETNT Trigger: TGTGTTCGTCTCTACGGACAAAGCTTCATCCTCCAGGTTTACTCATCTCAGAGGAAAGCCTGGTATCCCGTGTGCCAGGATGATTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000231544.2 |
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| CDS TCA 90 bp | CTGCCATACTTCATGAGAGCCATAGTCTGGGTGTGGTTCACCTGCTaGGAGGACTTTGTATCCCATGTCTTTACATGCTGCTCTCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPYFMRAIVWVWFTC*EDFVSHVFTCCSPV Trigger: TACGGGAGAGCAGCATGTAAAGACATGGGATACAAAGTCCTCTCAGCAGGTGAACCACACCCAGACTATGGCTCTCATGAAGTATGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231544.2 |
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| CDS TCA 90 bp | ACACGGGATACCAGGCTTTCCTCTGAGATGAGTAAACCTGGAGGATaGAGCTTTGTCCGTAGAGACGAACACAACGGTTCTCATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRDTRLSSEMSKPGG*SFVRRDEHNGSHLL Trigger: GAGAAGATGAGAACCGTTGTGTTCGTCTCTACGGACAAAGCTTCATCCTCCAGGTTTACTCATCTCAGAGGAAAGCCTGGTATCCCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000231544.2 |
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| CDS TCA 90 bp | GATGGGAAATTACTTTTTCTACCTGGTGTCTACTTCCATAGAACATaGGAGACTGTCTCAGAATTCCCGCAAATGCCGTCCAGTACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DGKLLFLPGVYFHRT*ETVSEFPQMPSSTS Trigger: CGAGGTACTGGACGGCATTTGCGGGAATTCTGAGACAGTCTCTCATGTTCTATGGAAGTAGACACCAGGTAGAAAAAGTAATTTCCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS GCA 90 bp | GGCAGACACACTGGCTTCACTAGATCATTAAAAGCCAAAGGTGTCTaGAGCTTCATGAGAGCAATGTCGTTATTCTTGGTCTTAGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRHTGFTRSLKAKGV*SFMRAMSLFLVLES Trigger: CGACTCTAAGACCAAGAATAACGACATTGCTCTCATGAAGCTGCAGACACCTTTGGCTTTTAATGATCTAGTGAAGCCAGTGTGTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 90 bp | ATATGTATTTACTATTACATTTGGAGGGCTCGATCAAGGGTACCATaGCAGCATTCAACACGTCCGAGGTCTTCCCTTTCTCATAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICIYYYIWRARSRVP*QHSTRPRSSLSHRW Trigger: CCACCTATGAGAAAGGGAAGACCTCGGACGTGTTGAATGCTGCCATGGTACCCTTGATCGAGCCCTCCAAATGTAATAGTAAATACATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 90 bp | CTTCATGAGAGCAATGTCGTTATTCTTGGTCTTAGAGTCGTAATTTaGATGGGAAATTACTTTTTCTACCTGGTGTCTACTTCCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHESNVVILGLRVVI*MGNYFFYLVSTSIE Trigger: TTCTATGGAAGTAGACACCAGGTAGAAAAAGTAATTTCCCATCCAAATTACGACTCTAAGACCAAGAATAACGACATTGCTCTCATGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS TCA 72 bp | ACCTCCAAAGCAAGACAGCAGCCACAGCAGCTCCCGTaGGGACAGTGCCCAGGGCGAGGGCTAAACACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TSKARQQPQQLP*GQCPGRGLNTA Trigger: CGCTGTGTTTAGCCCTCGCCCTGGGCACTGTCCTCACGGGAGCTGCTGTGGCTGCTGTCTTGCTTTGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 72 bp | CAGTACCTCGGGCTGCTGAGGGGTTCTTCCACACAGTaGGCGGCCGTCACAATCCACTCGGGGGTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: QYLGLLRGSSTQ*AAVTIHSGVMM Trigger: CATCATCACCCCCGAGTGGATTGTGACGGCCGCCCACTGTGTGGAAGAACCCCTCAGCAGCCCGAGGTACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS TCA 72 bp | GAATTCCCGCAAATGCCGTCCAGTACCTCGGGCTGCTaGGGGGTTCTTCCACACAGTGGGCGGCCGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: EFPQMPSSTSGC*GVLPHSGRPSQ Trigger: TTGTGACGGCCGCCCACTGTGTGGAAGAACCCCTCAGCAGCCCGAGGTACTGGACGGCATTTGCGGGAATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS CAA 90 bp | TCTGTAAATACCGTCACGTTCCCGTATACTCCAGGTCTGAGTGCCTaGGCACAGCCCGAGCCCCAGCTCGTGTCCCCAATCAGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVNTVTFPYTPGLSA*AQPEPQLVSPISHQ Trigger: CTGGTGGCTGATTGGGGACACGAGCTGGGGCTCGGGCTGTGCCAAGGCACTCAGACCTGGAGTATACGGGAACGTGACGGTATTTACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS GCA 72 bp | AGTCTCCTGGTGAGGCATTCAATCCACCCACAATCCTaGTCTGGCGTTTCACTGAGCGAACCCCGCATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLVRHSIHPQS*SGVSLSEPRIL Trigger: TAGAATGCGGGGTTCGCTCAGTGAAACGCCAGAGCAGGATTGTGGGTGGATTGAATGCCTCACCAGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 72 bp | CTGGGCTGGATACAAGTTGTAGCCATTGGGAGCCACTaGTGGTCTCGGAGGACAGATGTGCTCAGACTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LGWIQVVAIGSH*WSRRTDVLRLI Trigger: TATCAGTCTGAGCACATCTGTCCTCCGAGACCACCAGTGGCTCCCAATGGCTACAACTTGTATCCAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
||
| CDS GCA 72 bp | ATAGAACATGAGAGACTGTCTCAGAATTCCCGCAAATaGCGTCCAGTACCTCGGGCTGCTGAGGGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IEHERLSQNSRK*RPVPRAAEGFF Trigger: GAAGAACCCCTCAGCAGCCCGAGGTACTGGACGGCATTTGCGGGAATTCTGAGACAGTCTCTCATGTTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS GCA 72 bp | CCGAAATCCAGCATTCCTGGTCTAGGTCTAGCATCATaGCTGGGTTCGGCAGACACACTGGCTTCACTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PKSSIPGLGLAS*LGSADTLASLD Trigger: ATCTAGTGAAGCCAGTGTGTCTGCCGAACCCAGGCATGATGCTAGACCTAGACCAGGAATGCTGGATTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS TCA 72 bp | ATCCTGGCACACGGGATACCAGGCTTTCCTCTGAGATaGGTAAACCTGGAGGATGAAGCTTTGTCCGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILAHGIPGFPLR*VNLEDEALSVE Trigger: CTCTACGGACAAAGCTTCATCCTCCAGGTTTACTCATCTCAGAGGAAAGCCTGGTATCCCGTGTGCCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000231544.2 |
||
| CDS CCA 72 bp | GGCTTGCGTTGTAATCCTCGGAGCATACTGAGGCACTaGAGATGGGTAGTACTGGGCTGGATACAAGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GLRCNPRSILRH*RWVVLGWIQVV Trigger: TACAACTTGTATCCAGCCCAGTACTACCCATCTCCAGTGCCTCAGTATGCTCCGAGGATTACAACGCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
||
| CDS TCA 72 bp | ATTCAATCCACCCACAATCCTGCTCTGGCGTTTCACTaGGCGAACCCCGCATTCTATACAGCGCAAAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IQSTHNPALAFH*ANPAFYTAQRN Trigger: GTTTCTTTGCGCTGTATAGAATGCGGGGTTCGCTCAGTGAAACGCCAGAGCAGGATTGTGGGTGGATTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
||
| CDS CCA 72 bp | CGTTGTAATCCTCGGAGCATACTGAGGCACTGGAGATaGGTAGTACTGGGCTGGATACAAGTTGTAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RCNPRSILRHWR*VVLGWIQVVAI Trigger: AATGGCTACAACTTGTATCCAGCCCAGTACTACCCATCTCCAGTGCCTCAGTATGCTCCGAGGATTACAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
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| CDS CAA 72 bp | TTCTTAGACTTTGAGGTGCACAGTGCTCCTGAGGACTaGGGATGTGTGTGGATGACAGATGTTGAGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FLDFEVHSAPED*GCVWMTDVEAC Trigger: GCAAGCCTCAACATCTGTCATCCACACACATCCCAAGTCCTCAGGAGCACTGTGCACCTCAAAGTCTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
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| CDS CAA 90 bp | CACAGCGATTTCTTAGACTTTGAGGTGCACAGTGCTCCTGAGGACTaGGGATGTGTGTGGATGACAGATGTTGAGGCTTGCGTTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: HSDFLDFEVHSAPED*GCVWMTDVEACVVI Trigger: GATTACAACGCAAGCCTCAACATCTGTCATCCACACACATCCCAAGTCCTCAGGAGCACTGTGCACCTCAAAGTCTAAGAAATCGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000232141.2 |
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| CDS TCA 72 bp | ACCAGGCTTTCCTCTGAGATGAGTAAACCTGGAGGATaGAGCTTTGTCCGTAGAGACGAACACAACGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: TRLSSEMSKPGG*SFVRRDEHNGS Trigger: AGAACCGTTGTGTTCGTCTCTACGGACAAAGCTTCATCCTCCAGGTTTACTCATCTCAGAGGAAAGCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000395.8 ENSMUST00000231544.2 |
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| CDS TCA 72 bp | TTCATGAGAGCCATAGTCTGGGTGTGGTTCACCTGCTaGGAGGACTTTGTATCCCATGTCTTTACATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FMRAIVWVWFTC*EDFVSHVFTCC Trigger: GCAGCATGTAAAGACATGGGATACAAAGTCCTCTCAGCAGGTGAACCACACCCAGACTATGGCTCTCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231544.2 |
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| CDS CCA 72 bp | TACTATTACATTTGGAGGGCTCGATCAAGGGTACCATaGCAGCATTCAACACGTCCGAGGTCTTCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: YYYIWRARSRVP*QHSTRPRSSLS Trigger: AGAAAGGGAAGACCTCGGACGTGTTGAATGCTGCCATGGTACCCTTGATCGAGCCCTCCAAATGTAATAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CAA 72 bp | CATAAAGCTCGTTGCCCCGCTCTGGTCTGGTATCCCTaGGCTAGAATAAAAATTGTTCTTGTATCCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: HKARCPALVWYP*ARIKIVLVSHV Trigger: GACATGGGATACAAGAACAATTTTTATTCTAGCCAAGGGATACCAGACCAGAGCGGGGCAACGAGCTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS TCA 72 bp | TTACTTTTTCTACCTGGTGTCTACTTCCATAGAACATaGGAGACTGTCTCAGAATTCCCGCAAATGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLFLPGVYFHRT*ETVSEFPQMPS Trigger: GGACGGCATTTGCGGGAATTCTGAGACAGTCTCTCATGTTCTATGGAAGTAGACACCAGGTAGAAAAAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CAA 90 bp | ATTCAGCTTCATAAAGCTCGTTGCCCCGCTCTGGTCTGGTATCCCTaGGCTAGAATAAAAATTGTTCTTGTATCCCATGTCTTTACATGC | + |
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Preference number: 6 (lower is better) Translates to: IQLHKARCPALVWYP*ARIKIVLVSHVFTC Trigger: GCATGTAAAGACATGGGATACAAGAACAATTTTTATTCTAGCCAAGGGATACCAGACCAGAGCGGGGCAACGAGCTTTATGAAGCTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CAA 90 bp | ATGGCTGGTGTGATTAGGTTGTTGTATATGTATTTACTATTACATTaGGAGGGCTCGATCAAGGGTACCATGGCAGCATTCAACACGTCC | + |
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Preference number: 6 (lower is better) Translates to: MAGVIRLLYMYLLLH*EGSIKGTMAAFNTS Trigger: GGACGTGTTGAATGCTGCCATGGTACCCTTGATCGAGCCCTCCAAATGTAATAGTAAATACATATACAACAACCTAATCACACCAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS GCA 72 bp | ATAAAAATTGTTCTTGTATCCCATGTCTTTACATGCTaGTCTCCCGTAGCTCTCACTCCAATCATCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: IKIVLVSHVFTC*SPVALTPIILA Trigger: TGCCAGGATGATTGGAGTGAGAGCTACGGGAGAGCAGCATGTAAAGACATGGGATACAAGAACAATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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| CDS CCA 72 bp | ATTCAGCTTCATAAAGCTCGTTGCCCCGCTCTGGTCTaGTATCCCTTGGCTAGAATAAAAATTGTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: IQLHKARCPALV*YPLARIKIVLV Trigger: TACAAGAACAATTTTTATTCTAGCCAAGGGATACCAGACCAGAGCGGGGCAACGAGCTTTATGAAGCTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000395.8 |
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