Pregenerated sensors for TMPRSS15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022857Ensembl transcript IDs: ENSMUST00000023566.11, ENSMUST00000060402.6
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAAGAAATTCATGTGAATaGAGAACAAAACAACAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: FTFLLMLGQERDLCMFYLRNSCE*RTKQQR Trigger: TCGCTGTTGTTTTGTTCTCCATTCACATGAATTTCT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCCAGGGCCAGGCCCCTaGCTGGGCGTCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQPGPGP*LGVTST Trigger: GGTGGAAGTGACGCCCAGGCAGGGGCCTGGCCCTGG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGGCCAGGCCCCTGCCTaGGCGTCACTTCCACCAACG | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKGQAPA*ASLPPT Trigger: CGTTGGTGGAAGTGACGCCCAGGCAGGGGCCTGGCC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGGCCAGGCCCCTGCCTaGGCGTCACTTCCACCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQGQAPA*ASLPPT Trigger: CGTTGGTGGAAGTGACGCCCAGGCAGGGGCCTGGCC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAATGAGCACAGGGCCGTaGACCAGGCTGGCACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLMSTGP*TRLALY Trigger: ATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCAT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATGAGCACAGGGCCGTaGACCAGGCTGGCACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQMSTGP*TRLALY Trigger: ATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAACCAGCCAGTCACTGCTaGCAAGAGATGCACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKPASHC*QEMHRR Trigger: TCTGCGGTGCATCTCTTGTCAGCAGTGACTGGCTGG...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCCAGCCAGTCACTGCTaGCAAGAGATGCACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQPASHC*QEMHRR Trigger: TCTGCGGTGCATCTCTTGTCAGCAGTGACTGGCTGG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACACACAGTGTGCAGCTaGCACCAGCCAGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLHTVCS*HQPVTA Trigger: AGCAGTGACTGGCTGGTGTCAGCTGCACACTGTGTG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCACACAGTGTGCAGCTaGCACCAGCCAGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHTVCS*HQPVTA Trigger: AGCAGTGACTGGCTGGTGTCAGCTGCACACTGTGTG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGCTCTGGTGGAGGGGTaGGAACCAAGGTTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKALVEG*EPRLVL Trigger: CAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGCTCTGGTGGAGGGGTaGGAACCAAGGTTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQALVEG*EPRLVL Trigger: CAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGTCCCTCTGACTTCATaGCTTTTCCCCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKVPLTS*LFPRAA Trigger: TGCAGCCCTGGGGAAAAGTCATGAAGTCAGAGGGAC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGTCCCTCTGACTTCATaGCTTTTCCCCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQVPLTS*LFPRAA Trigger: TGCAGCCCTGGGGAAAAGTCATGAAGTCAGAGGGAC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACACAGTTCCAAGCATaGGCACAGGGCCGTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTQFQA*AQGREP Trigger: TGGTTCACGGCCCTGTGCTCATGCTTGGAACTGTGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACTGCTGACAAGAGATaGACCGCAGAGCAGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTADKR*TAEQTV Trigger: GACCGTCTGCTCTGCGGTGCATCTCTTGTCAGCAGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGGCCGTGAACCAGGCTaGCACTCTATTGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKGREPG*HSIETW Trigger: CCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGGCCGTGAACCAGGCTaGCACTCTATTGAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQGREPG*HSIETW Trigger: CCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAAGTTGGAAGCTCTGGTaGAGGGGTGGGAACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKSWKLW*RGGNQG Trigger: ACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGTTGGAAGCTCTGGTaGAGGGGTGGGAACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSWKLW*RGGNQG Trigger: ACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGTCAGTTGGAAGCTCTaGTGGAGGGGTGGGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKVSWKL*WRGGNQ Trigger: TTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGAC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGTCAGTTGGAAGCTCTaGTGGAGGGGTGGGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQVSWKL*WRGGNQ Trigger: TTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGAC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACAGCTTGCTTCATCTaGGCCATCTCTACAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTACFI*AISTVR Trigger: CCGCACTGTAGAGATGGCTCAGATGAAGCAAGCTGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCCATTCCCATATGTGTaGTCAAAACGTGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQPFPYV*SKRGPV Trigger: CACTGGCCCACGTTTTGACCACACATATGGGAATGG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGGTGGGAACCAAGGTTaGTTCTGGATAAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKGGNQG*FWIRTL Trigger: CAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGGTGGGAACCAAGGTTaGTTCTGGATAAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQGGNQG*FWIRTL Trigger: CAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAATCTTGGCAGGGCTCTaGAATCCCCAAGTAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKILAGL*NPQVIA Trigger: GGCTATTACTTGGGGATTCCAGAGCCCTGCCAAGAT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATCTTGGCAGGGCTCTaGAATCCCCAAGTAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQILAGL*NPQVIA Trigger: GGCTATTACTTGGGGATTCCAGAGCCCTGCCAAGAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATCGGCAAACAACACCTaGTTCATCTGGCCTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKSANNT*FIWPWI Trigger: TATCCAAGGCCAGATGAATCAGGTGTTGTTTGCCGA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCGGCAAACAACACCTaGTTCATCTGGCCTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSANNT*FIWPWI Trigger: TATCCAAGGCCAGATGAATCAGGTGTTGTTTGCCGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGAAAGTTCGGAGAACTaGAGGTTGAATTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKESSEN*RLNLAP Trigger: GGGAGCCAAATTCAACCTTCAGTTCTCCGAACTTTC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGAAAGTTCGGAGAACTaGAGGTTGAATTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQESSEN*RLNLAP Trigger: GGGAGCCAAATTCAACCTTCAGTTCTCCGAACTTTC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGGAGAAGTCAGATTTaGTTGCATATGCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQRRSQI*LHMQAQ Trigger: CTGGGCCTGCATATGCAATCAAATCTGACTTCTCCT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAAGATTTGATTGCATATaGAGGCCCAGGACTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKRFDCI*RPRTAV Trigger: GACAGCAGTCCTGGGCCTGCATATGCAATCAAATCT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGATTTGATTGCATATaGAGGCCCAGGACTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQRFDCI*RPRTAV Trigger: GACAGCAGTCCTGGGCCTGCATATGCAATCAAATCT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATTCCATCACAAGCTGTaGCACATAGCCCAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKFHHKL*HIAQCL Trigger: AAGACACTGGGCTATGTGCCACAGCTTGTGATGGAA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTCCATCACAAGCTGTaGCACATAGCCCAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQFHHKL*HIAQCL Trigger: AAGACACTGGGCTATGTGCCACAGCTTGTGATGGAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCACTCTATTGAGACATaGCCTGAAGTTGTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHSIET*PEVVAA Trigger: GGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACAACGATCTTTGGGCTaGCTTTCTGAGTCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLQRSLG*LSESPF Trigger: AAAAGGTGACTCAGAAAGTCAGCCCAAAGATCGTTG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCAACGATCTTTGGGCTaGCTTTCTGAGTCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQQRSLG*LSESPF Trigger: AAAAGGTGACTCAGAAAGTCAGCCCAAAGATCGTTG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAGATTCCCCAGAGGAATaGAGTTTCCATCTTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLDSPEE*SFHLCT Trigger: AGTGCAAAGATGGAAACTGCATTCCTCTGGGGAATC...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGATTCCCCAGAGGAATaGAGTTTCCATCTTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQDSPEE*SFHLCT Trigger: AGTGCAAAGATGGAAACTGCATTCCTCTGGGGAATC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTGTAGCAAGGAAACGTaGTCACTTGGATTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQCSKET*SLGFFP Trigger: GGGAAAGAATCCAAGTGACCACGTTTCCTTGCTACA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGTGATGTTGTATTCTaGCAGCTGTTGCTGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSDVVF*QLLLAL Trigger: AAGTGCCAGCAACAGCTGCCAGAATACAACATCACT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATTAGGCAGTGCACACTaGACTCCAAATGATGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKLGSAH*TPNDVT Trigger: TGTGACATCATTTGGAGTCCAGTGTGCACTGCCTAA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTAGGCAGTGCACACTaGACTCCAAATGATGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLGSAH*TPNDVT Trigger: TGTGACATCATTTGGAGTCCAGTGTGCACTGCCTAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAACACTGGACTCCAAATaGTGTCACACCAACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKTLDSK*CHTNKK Trigger: TTTCTTGTTGGTGTGACATCATTTGGAGTCCAGTGT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACACTGGACTCCAAATaGTGTCACACCAACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTLDSK*CHTNKK Trigger: TTTCTTGTTGGTGTGACATCATTTGGAGTCCAGTGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAAGTTGTTACAGGGACTaGTGTTGTGAAGTCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLSCYRD*CCEVTQ Trigger: TTGAGTGACTTCACAACAGCAGTCCCTGTAACAACT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGTTGTTACAGGGACTaGTGTTGTGAAGTCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSCYRD*CCEVTQ Trigger: TTGAGTGACTTCACAACAGCAGTCCCTGTAACAACT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATCATCATCAAGATCCTaGGTCCAGAAGCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKSSSRS*VQKQNP Trigger: TGGATTTTGCTTCTGGACCCAGGATCTTGATGATGA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCATCATCAAGATCCTaGGTCCAGAAGCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSSSRS*VQKQNP Trigger: TGGATTTTGCTTCTGGACCCAGGATCTTGATGATGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAGGAAACGTGGTCACTTaGATTCTTTCCCACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLGNVVT*ILSHSL Trigger: TAATGAGTGGGAAAGAATCCAAGTGACCACGTTTCC...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGGAAACGTGGTCACTTaGATTCTTTCCCACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQGNVVT*ILSHSL Trigger: TAATGAGTGGGAAAGAATCCAAGTGACCACGTTTCC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCTTCCATTAGGGGCTTaGTTTACTCTCACAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLPLGA*FTLTNG Trigger: ACCATTTGTGAGAGTAAACCAAGCCCCTAATGGAAG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATCTGGCAGCTGTTGCTaGCACTTTTCATTGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKSGSCC*HFSLDI Trigger: TATATCCAATGAAAAGTGCCAGCAACAGCTGCCAGA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCTGGCAGCTGTTGCTaGCACTTTTCATTGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSGSCC*HFSLDI Trigger: TATATCCAATGAAAAGTGCCAGCAACAGCTGCCAGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACATCTGTTGTTTTCTTaGCACATTAATGGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLHLLFS*HINGPP Trigger: TGGAGGGCCATTAATGTGCCAAGAAAACAACAGATG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCATCTGTTGTTTTCTTaGCACATTAATGGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHLLFS*HINGPP Trigger: TGGAGGGCCATTAATGTGCCAAGAAAACAACAGATG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| 3UTR CAA 72 bp | AGATTATTTGAGGGTGTAAAGAAGTTTACTTTTCTGTaGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFEGVKKFTFL*MLGQERDLCMF Trigger: AAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAACTTCTTTACACCCTCAAATAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACATAATGAAGAGAGCTaGGAGCATCACTTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLHNEES*EHHFKR Trigger: TCTTTTGAAGTGATGCTCTCAGCTCTCTTCATTATG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCATAATGAAGAGAGCTaGGAGCATCACTTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHNEES*EHHFKR Trigger: TCTTTTGAAGTGATGCTCTCAGCTCTCTTCATTATG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATCGTCTATCATTTGCTaGAGGTCAAAAGCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLSSIIC*RSKART Trigger: AGTTCTTGCTTTTGACCTTCAGCAAATGATAGACGA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACACTCAAGGATGCTGTaGTATCAATGCTGTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLHSRML*YQCCSN Trigger: ATTTGAACAGCATTGATATCACAGCATCCTTGAGTG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCACTCAAGGATGCTGTaGTATCAATGCTGTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHSRML*YQCCSN Trigger: ATTTGAACAGCATTGATATCACAGCATCCTTGAGTG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAAGAAATGTAAAATCCTaGGCCATTCCCATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKRNVKS*AIPICV Trigger: CACACATATGGGAATGGCTCAGGATTTTACATTTCT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGAAATGTAAAATCCTaGGCCATTCCCATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQRNVKS*AIPICV Trigger: CACACATATGGGAATGGCTCAGGATTTTACATTTCT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATCTCCATGTTTGTGGTaGAAATCACAGTCATCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKSPCLW*KSQSSY Trigger: ATAGGATGACTGTGATTTTCACCACAAACATGGAGA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCTCCATGTTTGTGGTaGAAATCACAGTCATCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSPCLW*KSQSSY Trigger: ATAGGATGACTGTGATTTTCACCACAAACATGGAGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATTGGCTGGATATATTTaGTTCAATGCCCTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLLAGYI*FNALNQ Trigger: CTGATTCAGGGCATTGAAGCAAATATATCCAGCCAA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTGGCTGGATATATTTaGTTCAATGCCCTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLAGYI*FNALNQ Trigger: CTGATTCAGGGCATTGAAGCAAATATATCCAGCCAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCTAATGGAAAGTCCTTaGTTTACACGGATGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLMESP*FTRMIH Trigger: ATGGATCATCCGTGTAAACCAAGGACTTTCCATTAG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACCATCCCTGTTCAGTTaGTGTAGAAATGTAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLPSLFS*CRNVKS Trigger: GGATTTTACATTTCTACACCAACTGAACAGGGATGG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCCATCCCTGTTCAGTTaGTGTAGAAATGTAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQPSLFS*CRNVKS Trigger: GGATTTTACATTTCTACACCAACTGAACAGGGATGG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATTTGCTTCAATGCCCTaGATCAGTTCTTCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKFASMP*ISSSFT Trigger: TGTAAAAGAAGAACTGATTCAGGGCATTGAAGCAAA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTTGCTTCAATGCCCTaGATCAGTTCTTCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQFASMP*ISSSFT Trigger: TGTAAAAGAAGAACTGATTCAGGGCATTGAAGCAAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAATATCATACTTTCAGTaGTGTTGTATTCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLISYFQ*CCILAA Trigger: AGCTGCCAGAATACAACATCACTGAAAGTATGATAT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATATCATACTTTCAGTaGTGTTGTATTCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQISYFQ*CCILAA Trigger: AGCTGCCAGAATACAACATCACTGAAAGTATGATAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACAAAACAAATCAGTTaGTACACAGTTCCAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTKQIS*YTVPSM Trigger: CATGCTTGGAACTGTGTAGCAACTGATTTGTTTTGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTGCAGTTTCCATCTTTaGACTGAAATTCGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQCSFHL*TEIRHL Trigger: AAGATGACGAATTTCAGTGCAAAGATGGAAACTGCA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATCAGCACAAGCTATATaGCATATGCTATGGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLSAQAI*HMLWIL Trigger: CAATATCCATAGCATATGGCATATAGCTTGTGCTGA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCAGCACAAGCTATATaGCATATGCTATGGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSAQAI*HMLWIL Trigger: CAATATCCATAGCATATGGCATATAGCTTGTGCTGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAATTGGGATATTTGTCTaGAAAGTTCGGAGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLIGIFV*KVRRTE Trigger: TTCAGTTCTCCGAACTTTCCAGACAAATATCCCAAT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATTGGGATATTTGTCTaGAAAGTTCGGAGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQIGIFV*KVRRTE Trigger: TTCAGTTCTCCGAACTTTCCAGACAAATATCCCAAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATACAGGAAGCTTGATTaGGATATTTGTCTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLLMLGQERDLCMFYLYRKLD*DICLES Trigger: ACTTTCCAGACAAATATCCCAATCAAGCTTCCTGTA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTACAGGAAGCTTGATTaGGATATTTGTCTGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQYRKLD*DICLES Trigger: ACTTTCCAGACAAATATCCCAATCAAGCTTCCTGTA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCACATGATTTATGGTTaGATTGCAATAGAATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHMIYG*IAIESR Trigger: CCTTGATTCTATTGCAATGCAACCATAAATCATGTG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCTCCACATGATTTATaGTTGCATTGCAATAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSPHDL*LHCNRI Trigger: GATTCTATTGCAATGCAACCATAAATCATGTGGAGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | ACAAGAGATGCACCGCAGAGCAGACGGTCTGTAGACCTGTCTCTGTaGTACAAAGCCACAACCCAGGGCCAGGCCCCTGCCTGGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRDAPQSRRSVDLSL*YKATTQGQAPAWAS Trigger: TGACGCCCAGGCAGGGGCCTGGCCCTGGGTTGTGGCTTTGTATCACAGAGACAGGTCTACAGACCGTCTGCTCTGCGGTGCATCTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 90 bp | AGACCTGTCTCTGTGATACAAAGCCACAACCCAGGGCCAGGCCCCTaGCTGGGCGTCACTTCCACCAACGATCTTTGGGCTGACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPVSVIQSHNPGPGP*LGVTSTNDLWADFL Trigger: CAGAAAGTCAGCCCAAAGATCGTTGGTGGAAGTGACGCCCAGGCAGGGGCCTGGCCCTGGGTTGTGGCTTTGTATCACAGAGACAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | GTTCAAAAGGTCCTCCGCAGTCAGTTGGAAGCTCTGGTGGAGGGGTaGGAACCAAGGTTGGTTCTGGATAAGGACTCTGACTACAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VQKVLRSQLEALVEG*EPRLVLDKDSDYKF Trigger: GAATTTGTAGTCAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGACTGCGGAGGACCTTTTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | ACTTCTCCATCACAAAACAAATCAGTTGCTACACAGTTCCAAGCATaGGCACAGGGCCGTGAACCAGGCTGGCACTCTATTGAGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQNKSVATQFQA*AQGREPGWHSIETW Trigger: CCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCATGCTTGGAACTGTGTAGCAACTGATTTGTTTTGTGATGGAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | GTTGCTTCTTGTGCCATTAAGAAAACGCACACAGCTTGCTTCATCTaGGCCATCTCTACAGTGCGGGTAGCTATCACAGAGATTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VASCAIKKTHTACFI*AISTVRVAITEIPQ Trigger: CTGGGGAATCTCTGTGATAGCTACCCGCACTGTAGAGATGGCTCAGATGAAGCAAGCTGTGTGCGTTTTCTTAATGGCACAAGAAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 90 bp | CATCTCTACAGTGCGGGTAGCTATCACAGAGATTCCCCAGAGGAATaGAGTTTCCATCTTTGCACTGAAATTCGTCATCTTGGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLYSAGSYHRDSPEE*SFHLCTEIRHLGRA Trigger: AGCCCTGCCAAGATGACGAATTTCAGTGCAAAGATGGAAACTGCATTCCTCTGGGGAATCTCTGTGATAGCTACCCGCACTGTAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 90 bp | TTGGCAGGGCTCTGGAATCCCCAAGTAATAGCCGGAAGTGAAATTTaGTTTGAAGCCCTTGCGTCTGGTCTCCATGTTTGTGGTGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LAGLWNPQVIAGSEI*FEALASGLHVCGEN Trigger: ATTTTCACCACAAACATGGAGACCAGACGCAAGGGCTTCAAAGCAAATTTCACTTCCGGCTATTACTTGGGGATTCCAGAGCCCTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | CACAGCACATGTAATACCAAAAATGAAGGCAGACAGGCTCTGAAGTaGGGTCTAAAGAGAGGCTTGAAAGGCCTACTCTTTCGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSTCNTKNEGRQALK*GLKRGLKGLLFRFS Trigger: GGAGAAGCGAAAGAGTAGGCCTTTCAAGCCTCTCTTTAGACCTCACTTCAGAGCCTGTCTGCCTTCATTTTTGGTATTACATGTGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | AATTTGATCAACCACCCGTCTTACTACTTGAGGAGAAGTCAGATTTaGTTGCATATGCAGGCCCAGGACTGCTGTCCATCTGGTTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: NLINHPSYYLRRSQI*LHMQAQDCCPSGWI Trigger: GATCCAACCAGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAAATCTGACTTCTCCTCAAGTAGTAAGACGGGTGGTTGATCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGTCCTCCGCAGTCAGTaGGAAGCTCTGGTGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQVLRSQ*EALVEG Trigger: CCCCTCCACCAGAGCTTCCAACTGACTGCGGAGGAC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | TCCCATATGTGTGGTCAAAACGTGGGCCAGTGTAGCAAGGAAACGTaGTCACTTGGATTCTTTCCCACTCATTATCATCATCAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHMCGQNVGQCSKET*SLGFFPTHYHHQDP Trigger: AGGATCTTGATGATGATAATGAGTGGGAAAGAATCCAAGTGACCACGTTTCCTTGCTACACTGGCCCACGTTTTGACCACACATATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | GAGCATTGTAGACTAGGAGTTAGTATCAAGCTTCCATTAGGGGCTTaGTTTACTCTCACAAATGGTCCACCTCCGGTAGATGATATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EHCRLGVSIKLPLGA*FTLTNGPPPVDDIG Trigger: GCCAATATCATCTACCGGAGGTGGACCATTTGTGAGAGTAAACCAAGCCCCTAATGGAAGCTTGATACTAACTCCTAGTCTACAATGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | AAGTCAGATTTGATTGCATATGCAGGCCCAGGACTGCTGTCCATCTaGTTGGATCTAGATTTCTTCTATACACACAGTGTGCAGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSDLIAYAGPGLLSI*LDLDFFYTHSVQLT Trigger: TGTCAGCTGCACACTGTGTGTATAGAAGAAATCTAGATCCAACCAGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAAATCTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | TACAGGAAGCTTGATTGGGATATTTGTCTGGAAAGTTCGGAGAACTaGAGGTTGAATTTGGCTCCCATAGTTCAAAAGGTCCTCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YRKLDWDICLESSEN*RLNLAPIVQKVLRS Trigger: ACTGCGGAGGACCTTTTGAACTATGGGAGCCAAATTCAACCTTCAGTTCTCCGAACTTTCCAGACAAATATCCCAATCAAGCTTCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 90 bp | GATGATATTGGCATTGATGAGTTTGCACTCCCTAGTCCCAGAAGATaGCAAACTTCATTTGAAATTTGTGTGGTCCAGTTCTCAGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: DDIGIDEFALPSPRR*QTSFEICVVQFSAQ Trigger: TTGTGCTGAGAACTGGACCACACAAATTTCAAATGAAGTTTGTCATCTTCTGGGACTAGGGAGTGCAAACTCATCAATGCCAATATCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | GTGGTCACTTGGATTCTTTCCCACTCATTATCATCATCAAGATCCTaGGTCCAGAAGCAAAATCCATCATCAAATGTACAGTCGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVTWILSHSLSSSRS*VQKQNPSSNVQSIF Trigger: GAAAATCGACTGTACATTTGATGATGGATTTTGCTTCTGGACCCAGGATCTTGATGATGATAATGAGTGGGAAAGAATCCAAGTGACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | ATTTGTGTGGTCCAGTTCTCAGCACAAGCTATATGCCATATGCTATaGATATTGAACTGTACCAACCCATTGTTGCTTCTTGTGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: ICVVQFSAQAICHML*ILNCTNPLLLLVPL Trigger: TAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTGTGCTGAGAACTGGACCACACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 90 bp | TCTCCACATGATTTATGGTTGCATTGCAATAGAATCAAGGAATCTTaGGAGCATTGTAGACTAGGAGTTAGTATCAAGCTTCCATTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPHDLWLHCNRIKES*EHCRLGVSIKLPLG Trigger: CCCTAATGGAAGCTTGATACTAACTCCTAGTCTACAATGCTCCCAAGATTCCTTGATTCTATTGCAATGCAACCATAAATCATGTGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGACAATGGTGCTGAAGTaGTTGCAGCCACTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQTMVLK*LQPLLL Trigger: CAACAACAGTGGCTGCAACAACTTCAGCACCATTGT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATGGATAACGATCAGCTaGGAAAACCCCAGAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLWITIS*ENPRIS Trigger: GGAGATTCTGGGGTTTTCCAAGCTGATCGTTATCCA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTGGATAACGATCAGCTaGGAAAACCCCAGAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQWITIS*ENPRIS Trigger: GGAGATTCTGGGGTTTTCCAAGCTGATCGTTATCCA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATATCATCCAGGGCTATaGTACTGCAACCTCGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKYHPGL*YCNLGF Trigger: GAAACCGAGGTTGCAGTACAATAGCCCTGGATGATA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTATCATCCAGGGCTATaGTACTGCAACCTCGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQYHPGL*YCNLGF Trigger: GAAACCGAGGTTGCAGTACAATAGCCCTGGATGATA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAATTTGCTTTGAAGCCCTaGCGTCTGGTCTCCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKFALKP*RLVSMF Trigger: AAACATGGAGACCAGACGCAAGGGCTTCAAAGCAAA...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTTGCTTTGAAGCCCTaGCGTCTGGTCTCCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQFALKP*RLVSMF Trigger: AAACATGGAGACCAGACGCAAGGGCTTCAAAGCAAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGAAGTGAAATTTGCTTaGAAGCCCTTGCGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQEVKFA*KPLRLV Trigger: GACCAGACGCAAGGGCTTCAAAGCAAATTTCACTTC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGAGGAGAAGTCAGATTaGATTGCATATGCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQEEKSD*IAYAGP Trigger: TGGGCCTGCATATGCAATCAAATCTGACTTCTCCTC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGTATTCTGGCAGCTGTaGCTGGCACTTTTCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKVFWQL*LALFIG Trigger: TCCAATGAAAAGTGCCAGCAACAGCTGCCAGAATAC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGTATTCTGGCAGCTGTaGCTGGCACTTTTCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQVFWQL*LALFIG Trigger: TCCAATGAAAAGTGCCAGCAACAGCTGCCAGAATAC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 90 bp | TATAAGAGGAACATCAGCTTCTTTCAGCACATCAACAGTAGAACCTaGATTTATTTTATCATATCCCCAGCCAGCAATCGAACAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YKRNISFFQHINSRT*IYFIISPASNRTSS Trigger: AGAACTTGTTCGATTGCTGGCTGGGGATATGATAAAATAAATGCAGGTTCTACTGTTGATGTGCTGAAAGAAGCTGATGTTCCTCTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAATGGAGAGTGACCAGTaGGCTGGATATATTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLMESDQ*AGYICF Trigger: GAAGCAAATATATCCAGCCAACTGGTCACTCTCCAT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATGGAGAGTGACCAGTaGGCTGGATATATTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQMESDQ*AGYICF Trigger: GAAGCAAATATATCCAGCCAACTGGTCACTCTCCAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAGGAAACGTGGTCACTaGGATTCTTTCCCACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQRKRGH*DSFPLI Trigger: AATGAGTGGGAAAGAATCCAAGTGACCACGTTTCCT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAATCACAGTCATCCTATaGGTGGTAGAGAACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKITVIL*VVENKS Trigger: GGACTTGTTCTCTACCACCAATAGGATGACTGTGAT...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATCACAGTCATCCTATaGGTGGTAGAGAACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQITVIL*VVENKS Trigger: GGACTTGTTCTCTACCACCAATAGGATGACTGTGAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAGATCTCGTCTATCATTaGCTGAAGGTCAAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLDLVYH*LKVKSK Trigger: CTTGCTTTTGACCTTCAGCAAATGATAGACGAGATC...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGATCTCGTCTATCATTaGCTGAAGGTCAAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQDLVYH*LKVKSK Trigger: CTTGCTTTTGACCTTCAGCAAATGATAGACGAGATC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGTTGGCTGGATATATTaGCTTCAATGCCCTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQVGWIY*LQCPES Trigger: TGATTCAGGGCATTGAAGCAAATATATCCAGCCAAC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACATGGCCTGAAGTTGTaGCAAAAGTTGCTGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLHGLKL*QKLLLI Trigger: TATCAACAGCAACTTTTGCAACAACTTCAGGCCATG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATCTAATGGAAAGTCCTaGGTTTACACGGATGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLSNGKS*VYTDDP Trigger: TGGATCATCCGTGTAAACCAAGGACTTTCCATTAGA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTCTAATGGAAAGTCCTaGGTTTACACGGATGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQSNGKS*VYTDDP Trigger: TGGATCATCCGTGTAAACCAAGGACTTTCCATTAGA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTATTAAGTTCGCTGTTGTaGAAAGTGCTGTACGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLLSSLL*KVLYVA Trigger: TGCAACGTACAGCACTTTCAACAACAGCGAACTTAA...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTAAGTTCGCTGTTGTaGAAAGTGCTGTACGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLSSLL*KVLYVA Trigger: TGCAACGTACAGCACTTTCAACAACAGCGAACTTAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGAACTGTACCAACCCATaGTTGCTTCTTGTGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQNCTNP*LLLVPL Trigger: TAATGGCACAAGAAGCAACAATGGGTTGGTACAGTT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTACTGCTGTCCATCTGGTaGGATCTAGATTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLLLSIW*DLDFFY Trigger: ATAGAAGAAATCTAGATCCAACCAGATGGACAGCAG...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCTGCTGTCCATCTGGTaGGATCTAGATTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLLSIW*DLDFFY Trigger: ATAGAAGAAATCTAGATCCAACCAGATGGACAGCAG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | TTTACTTTTCTGTTGATGCTAGGTCAGGAGAGAGACCTTTGCATGTTTTATTTAATACTTTCAGTGATGTaGTATTCTGGCAGCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTFLLMLGQERDLCMFYLILSVM*YSGSCC Trigger: GCAACAGCTGCCAGAATACAACATCACTGAAAGTAT...TAAATAAAACATGCAAAGGTCTCTCTCCTGACCTAGCATCAACAGAAAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGATACTTTCAGTGATGTaGTATTCTGGCAGCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQILSVM*YSGSCC Trigger: GCAACAGCTGCCAGAATACAACATCACTGAAAGTAT...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGAGCCTCTTAAAATTTaGCTAGGTCCTATACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKEPLKI*LGPIPS Trigger: TGAAGGTATAGGACCTAGCAAAATTTTAAGAGGCTC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGAGCCTCTTAAAATTTaGCTAGGTCCTATACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQEPLKI*LGPIPS Trigger: TGAAGGTATAGGACCTAGCAAAATTTTAAGAGGCTC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGTTGTTAAGTTCGCTGTaGTTGAAAGTGCTGTACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQLLSSL*LKVLYV Trigger: AACGTACAGCACTTTCAACAACAGCGAACTTAACAA...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAACATTCTTCAGACTACTaGATTCAAAGATCTCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKHSSDY*IQRSRL Trigger: TAGACGAGATCTTTGAATCAAGTAGTCTGAAGAATG...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCATTCTTCAGACTACTaGATTCAAAGATCTCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQHSSDY*IQRSRL Trigger: TAGACGAGATCTTTGAATCAAGTAGTCTGAAGAATG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAACGGTTTCTGAAAGCATaGAACACAACCTTAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKRFLKA*NTTLNS Trigger: AGAATTTAAGGTTGTGTTCAATGCTTTCAGAAACCG...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGCGGTTTCTGAAAGCATaGAACACAACCTTAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQRFLKA*NTTLNS Trigger: AGAATTTAAGGTTGTGTTCAATGCTTTCAGAAACCG...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTGTCTGGGACATGGGCTCATAATAAATGTACTTTTATGAACAGGAAAGATGACAAACTTCATTaGAAATTTGTGTGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VNVSGTWAHNKCTFMNRKDDKLH*KFVWSS Trigger: ACTGGACCACACAAATTTCAAATGAAGTTTGTCATC...TTTCCTGTTCATAAAAGTACATTTATTATGAGCCCATGTCCCAGACACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGTAAAAACGAGGGAAAAATAATTGTCCATCACTTATGTTTGGGTCAGGATGACAAACTTCATTaGAAATTTGTGTGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSKNEGKIIVHHLCLGQDDKLH*KFVWSS Trigger: ACTGGACCACACAAATTTCAAATGAAGTTTGTCATC...CTGACCCAAACATAAGTGATGGACAATTATTTTTCCCTCGTTTTTACTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | GTCCTCCGCAGTCAGTTGGAAGCTCTGGTGGAGGGGTaGGAACCAAGGTTGGTTCTGGATAAGGACTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLRSQLEALVEG*EPRLVLDKDSD Trigger: GTCAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGACTGCGGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CATGAGCACAGGGCCGTGAACCAGGCTGGCACTCTATaGAGACATGGCCTGAAGTTGTTGCAGCCACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HEHRAVNQAGTL*RHGLKLLQPLL Trigger: CAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | TTCAAAAGGTCCTCCGCAGTCAGTTGGAAGCTCTGGTaGAGGGGTGGGAACCAAGGTTGGTTCTGGATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FKRSSAVSWKLW*RGGNQGWFWIR Trigger: CCTTATCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGACTGCGGAGGACCTTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | CAGGGCCGTGAACCAGGCTGGCACTCTATTGAGACATaGCCTGAAGTTGTTGCAGCCACTGTTGTTGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGREPGWHSIET*PEVVAATVVDK Trigger: CTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CATGAGCACAGGGCCGTGAACCAGGCTGGCACTCTATaGAGACATGGCCTGAAGTTGTTGCAAAAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HEHRAVNQAGTL*RHGLKLLQKLL Trigger: CAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CAA 90 bp | CTCCGCAGTCAGTTGGAAGCTCTGGTGGAGGGGTGGGAACCAAGGTaGGTTCTGGATAAGGACTCTGACTACAAATTCCATTTGTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSQLEALVEGWEPR*VLDKDSDYKFHLLG Trigger: GCCTAACAAATGGAATTTGTAGTCAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGACTGCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | AGGGCCGTGAACCAGGCTGGCACTCTATTGAGACATGGCCTGAAGTaGTTGCAGCCACTGTTGTTGATAAGTTACCCAGTGATGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RAVNQAGTLLRHGLK*LQPLLLISYPVMLK Trigger: CTTCAGCATCACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | GCCGTGAACCAGGCTGGCACTCTATTGAGACATGGCCTGAAGTTGTaGCAGCCACTGTTGTTGATAAGTTACCCAGTGATGCTGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AVNQAGTLLRHGLKL*QPLLLISYPVMLKL Trigger: CAACTTCAGCATCACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | TCACAAAACAAATCAGTTGCTACACAGTTCCAAGCATaGGCACAGGGCCGTGAACCAGGCTGGCACTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: SQNKSVATQFQA*AQGREPGWHSI Trigger: AATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCATGCTTGGAACTGTGTAGCAACTGATTTGTTTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | AACCACCCGTCTTACTACTTGAGGAGAAGTCAGATTTaGTTGCATATGCAGGCCCAGGACTGCTGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: NHPSYYLRRSQI*LHMQAQDCCPS Trigger: AGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAAATCTGACTTCTCCTCAAGTAGTAAGACGGGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | AGTTGGAAGCTCTGGTGGAGGGGTGGGAACCAAGGTTaGTTCTGGATAAGGACTCTGACTACAAATTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SWKLWWRGGNQG*FWIRTLTTNSI Trigger: AATGGAATTTGTAGTCAGAGTCCTTATCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CTGGACAGTTCACTTCTCCATCACAAAACAAATCAGTaGCTACACAGTTCCAAGCATGAGCACAGGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDSSLLHHKTNQ*LHSSKHEHRAV Trigger: CACGGCCCTGTGCTCATGCTTGGAACTGTGTAGCAACTGATTTGTTTTGTGATGGAGAAGTGAACTGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CAGGCTGGCACTCTATTGAGACATGGCCTGAAGTTGTaGCAGCCACTGTTGTTGATAAGTTACCCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: QAGTLLRHGLKL*QPLLLISYPVM Trigger: CATCACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | AACCAGGCTGGCACTCTATTGAGACATGGCCTGAAGTaGTTGCAGCCACTGTTGTTGATAAGTTACCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NQAGTLLRHGLK*LQPLLLISYPV Trigger: CACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | TGTGTGGTCAAAACGTGGGCCAGTGTAGCAAGGAAACGTGGTCACTaGGATTCTTTCCCACTCATTATCATCATCAAGATCCTGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CVVKTWASVARKRGH*DSFPLIIIIKILGP Trigger: TGGACCCAGGATCTTGATGATGATAATGAGTGGGAAAGAATCCAAGTGACCACGTTTCCTTGCTACACTGGCCCACGTTTTGACCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | TTGCGTCTGGTCTCCATGTTTGTGGTGAAAATCACAGTCATCCTATaGGTGGTAGAGAACAAGTCCTTCACAGGACCAGGTCCTGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LRLVSMFVVKITVIL*VVENKSFTGPGPVY Trigger: GTACACAGGACCTGGTCCTGTGAAGGACTTGTTCTCTACCACCAATAGGATGACTGTGATTTTCACCACAAACATGGAGACCAGACGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | AGGGCCGTGAACCAGGCTGGCACTCTATTGAGACATGGCCTGAAGTaGTTGCAAAAGTTGCTGTTGATAAATTACACAATGGTGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RAVNQAGTLLRHGLK*LQKLLLINYTMVLK Trigger: CTTCAGCACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CAA 90 bp | CAATTTGATCAACCACCCGTCTTACTACTTGAGGAGAAGTCAGATTaGATTGCATATGCAGGCCCAGGACTGCTGTCCATCTGGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QFDQPPVLLLEEKSD*IAYAGPGLLSIWLD Trigger: ATCCAACCAGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAAATCTGACTTCTCCTCAAGTAGTAAGACGGGTGGTTGATCAAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 72 bp | CTCTGGAATCCCCAAGTAATAGCCGGAAGTGAAATTTaGTTTGAAGCCCTTGCGTCTGGTCTCCATGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWNPQVIAGSEI*FEALASGLHVC Trigger: ACAAACATGGAGACCAGACGCAAGGGCTTCAAAGCAAATTTCACTTCCGGCTATTACTTGGGGATTCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | AATGCAGTTTCCATCTTTGCACTGAAATTCGTCATCTaGGCAGGGCTCTGGAATCCCCAAGTAATAGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: NAVSIFALKFVI*AGLWNPQVIAG Trigger: TCCGGCTATTACTTGGGGATTCCAGAGCCCTGCCAAGATGACGAATTTCAGTGCAAAGATGGAAACTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | GCCGTGAACCAGGCTGGCACTCTATTGAGACATGGCCTGAAGTTGTaGCAAAAGTTGCTGTTGATAAATTACACAATGGTGCTGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AVNQAGTLLRHGLKL*QKLLLINYTMVLKL Trigger: CAACTTCAGCACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTGGTTCACGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS GCA 72 bp | AGTGCGGGTAGCTATCACAGAGATTCCCCAGAGGAATaGAGTTTCCATCTTTGCACTGAAATTCGTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAGSYHRDSPEE*SFHLCTEIRHL Trigger: AAGATGACGAATTTCAGTGCAAAGATGGAAACTGCATTCCTCTGGGGAATCTCTGTGATAGCTACCCGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | TGTGGTCAAAACGTGGGCCAGTGTAGCAAGGAAACGTaGTCACTTGGATTCTTTCCCACTCATTATCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: CGQNVGQCSKET*SLGFFPTHYHH Trigger: ATGATGATAATGAGTGGGAAAGAATCCAAGTGACCACGTTTCCTTGCTACACTGGCCCACGTTTTGACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | ATCTTTGCACTGAAATTCGTCATCTTGGCAGGGCTCTaGAATCCCCAAGTAATAGCCGGAAGTGAAATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IFALKFVILAGL*NPQVIAGSEIC Trigger: GCAAATTTCACTTCCGGCTATTACTTGGGGATTCCAGAGCCCTGCCAAGATGACGAATTTCAGTGCAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | AGACTAGGAGTTAGTATCAAGCTTCCATTAGGGGCTTaGTTTACTCTCACAAATGGTCCACCTCCGGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLGVSIKLPLGA*FTLTNGPPPVD Trigger: ATCTACCGGAGGTGGACCATTTGTGAGAGTAAACCAAGCCCCTAATGGAAGCTTGATACTAACTCCTAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | TTGATTGCATATGCAGGCCCAGGACTGCTGTCCATCTaGTTGGATCTAGATTTCTTCTATACACACAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LIAYAGPGLLSI*LDLDFFYTHSV Trigger: CACACTGTGTGTATAGAAGAAATCTAGATCCAACCAGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | GTCTCCATGTTTGTGGTGAAAATCACAGTCATCCTATaGGTGGTAGAGAACAAGTCCTTCACAGGACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSMFVVKITVIL*VVENKSFTGPG Trigger: ACCTGGTCCTGTGAAGGACTTGTTCTCTACCACCAATAGGATGACTGTGATTTTCACCACAAACATGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | CAGGCTGGCACTCTATTGAGACATGGCCTGAAGTTGTTGCAAAAGTaGCTGTTGATAAATTACACAATGGTGCTGAAGTTGTTGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QAGTLLRHGLKLLQK*LLINYTMVLKLLQP Trigger: TGGCTGCAACAACTTCAGCACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CCA 72 bp | AATCTCCAGTCAACAAAAATCTTCCATCACAAGCTGTaGCACATAGCCCAGTGTCTTCATCTGAACCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: NLQSTKIFHHKL*HIAQCLHLNHL Trigger: CAGATGGTTCAGATGAAGACACTGGGCTATGTGCCACAGCTTGTGATGGAAGATTTTTGTTGACTGGAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | GGCACTCTATTGAGACATGGCCTGAAGTTGTTGCAAAAGTTGCTGTaGATAAATTACACAATGGTGCTGAAGTTGTTGCAGCCACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTLLRHGLKLLQKLL*INYTMVLKLLQPLL Trigger: CAACAGTGGCTGCAACAACTTCAGCACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CAA 90 bp | GAACCAAGGTTGGTTCTGGATAAGGACTCTGACTACAAATTCCATTaGTTAGGCTTATATCATCCAGGGCTATTGTACTGCAACCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EPRLVLDKDSDYKFH*LGLYHPGLLYCNLG Trigger: ACCGAGGTTGCAGTACAATAGCCCTGGATGATATAAGCCTAACAAATGGAATTTGTAGTCAGAGTCCTTATCCAGAACCAACCTTGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | GGCATTGATGAGTTTGCACTCCCTAGTCCCAGAAGATaGCAAACTTCATTTGAAATTTGTGTGGTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIDEFALPSPRR*QTSFEICVVQF Trigger: GAACTGGACCACACAAATTTCAAATGAAGTTTGTCATCTTCTGGGACTAGGGAGTGCAAACTCATCAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CAGGCTGGCACTCTATTGAGACATGGCCTGAAGTTGTaGCAAAAGTTGCTGTTGATAAATTACACAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAGTLLRHGLKL*QKLLLINYTMV Trigger: CACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAATAGAGTGCCAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS TCA 72 bp | TCCAATAGAGAAGACCATGAGCATAATGAAGAGAGCTaGGAGCATCACTTCAAAAGAGCTGATAGAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SNREDHEHNEES*EHHFKRADRVM Trigger: CATCACTCTATCAGCTCTTTTGAAGTGATGCTCTCAGCTCTCTTCATTATGCTCATGGTCTTCTCTATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | CTTGATTGGGATATTTGTCTGGAAAGTTCGGAGAACTaGAGGTTGAATTTGGCTCCCATAGTTCAAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LDWDICLESSEN*RLNLAPIVQKV Trigger: GACCTTTTGAACTATGGGAGCCAAATTCAACCTTCAGTTCTCCGAACTTTCCAGACAAATATCCCAATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | TCTCAGCACAAGCTATATGCCATATGCTATGGATATTaGACTGTACCAACCCATTGTTGCTTCTTGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQHKLYAICYGY*TVPTHCCFLCH Trigger: ATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTGTGCTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | CTCCTTCTTCATATCCTGCACATATCATACTTTCAGTaGTGTTGTATTCTGGCAGCTGTTGCTGGCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLHILHISYFQ*CCILAAVAGTF Trigger: AAAAGTGCCAGCAACAGCTGCCAGAATACAACATCACTGAAAGTATGATATGTGCAGGATATGAAGAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 72 bp | TGTTACAGGGACTGCTGTTGTGAAGTCACTCAAGGATaGTGTGATATCAATGCTGTTCAAATCAATATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CYRDCCCEVTQG*CDINAVQINME Trigger: CTCCATATTGATTTGAACAGCATTGATATCACAGCATCCTTGAGTGACTTCACAACAGCAGTCCCTGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | GTCCAGTTCTCAGCACAAGCTATATGCCATATGCTATaGATATTGAACTGTACCAACCCATTGTTGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQFSAQAICHML*ILNCTNPLLLL Trigger: AAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTGTGCTGAGAACTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | TGCCATATGCTATGGATATTGAACTGTACCAACCCATaGTTGCTTCTTGTGCCATTAAGAAAACGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: CHMLWILNCTNP*LLLVPLRKRTQ Trigger: CTGTGTGCGTTTTCTTAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | TTCTCAGCACAAGCTATATGCCATATGCTATGGATATaGAACTGTACCAACCCATTGTTGCTTCTTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSAQAICHMLWI*NCTNPLLLLVP Trigger: TGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTGTGCTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CTTTCTGCGTCTGTCATAATGAGGGTTTATGACAATTaGATCAACCACCCGTCTTACTACTTGAGGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSASVIMRVYDN*INHPSYYLRRS Trigger: ACTTCTCCTCAAGTAGTAAGACGGGTGGTTGATCAAATTGTCATAAACCCTCATTATGACAGACGCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | CAAGCTATATGCCATATGCTATGGATATTGAACTGTACCAACCCATaGTTGCTTCTTGTGCCATTAAGAAAACGCACACAGCTTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QAICHMLWILNCTNP*LLLVPLRKRTQLAS Trigger: TGAAGCAAGCTGTGTGCGTTTTCTTAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | GTGGTCCAGTTCTCAGCACAAGCTATATGCCATATGCTATGGATATaGAACTGTACCAACCCATTGTTGCTTCTTGTGCCATTAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VVQFSAQAICHMLWI*NCTNPLLLLVPLRK Trigger: TTTTCTTAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATGGCATATAGCTTGTGCTGAGAACTGGACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 90 bp | CTTTCAGTGATGTTGTATTCTGGCAGCTGTTGCTGGCACTTTTCATaGGATATAAGAGGAACATCAGCTTCTTTCAGCACATCAACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LSVMLYSGSCCWHFS*DIRGTSASFSTSTV Trigger: TACTGTTGATGTGCTGAAAGAAGCTGATGTTCCTCTTATATCCAATGAAAAGTGCCAGCAACAGCTGCCAGAATACAACATCACTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | CCTCTCTGTGCATTTAAATTCCATATACAGGAAGCTTaGTTGGGATATTTGTCTGGAAAGTTCGGAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PLCAFKFHIQEA*LGYLSGKFGEL Trigger: CAGTTCTCCGAACTTTCCAGACAAATATCCCAATCAAGCTTCCTGTATATGGAATTTAAATGCACAGAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 72 bp | AACATCAGCTTCTTTCAGCACATCAACAGTAGAACCTaGATTTATTTTATCATATCCCCAGCCAGCAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: NISFFQHINSRT*IYFIISPASNR Trigger: TCGATTGCTGGCTGGGGATATGATAAAATAAATGCAGGTTCTACTGTTGATGTGCTGAAAGAAGCTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | AAGTTGCTGTTGATAAATTACACAATGGTGCTGAAGTaGTTGCAGCCACTGTTGTTGATAAGTTACCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KLLLINYTMVLK*LQPLLLISYPV Trigger: CACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGCACCATTGTGTAATTTATCAACAGCAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CAA 72 bp | TTGAGACATGGCCTGAAGTTGTTGCAAAAGTTGCTGTaGATAAATTACACAATGGTGCTGAAGTTGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRHGLKLLQKLL*INYTMVLKLLQ Trigger: CTGCAACAACTTCAGCACCATTGTGTAATTTATCAACAGCAACTTTTGCAACAACTTCAGGCCATGTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023566.11 |
||
| CDS CAA 72 bp | TTGGTTCTGGATAAGGACTCTGACTACAAATTCCATTaGTTAGGCTTATATCATCCAGGGCTATTGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLDKDSDYKFH*LGLYHPGLLYC Trigger: GCAGTACAATAGCCCTGGATGATATAAGCCTAACAAATGGAATTTGTAGTCAGAGTCCTTATCCAGAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | CATATGCTATGGATATTGAACTGTACCAACCCATTGTaGCTTCTTGTGCCATTAAGAAAACGCACACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HMLWILNCTNPL*LLVPLRKRTQL Trigger: AAGCTGTGTGCGTTTTCTTAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCAATATCCATAGCATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | ATAAAAGATCCAAAGTTCATTCTAATGGAAAGTCCTTaGTTTACACGGATGATCCATCGGCAAACAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: IKDPKFILMESP*FTRMIHRQTTP Trigger: AGGTGTTGTTTGCCGATGGATCATCCGTGTAAACCAAGGACTTTCCATTAGAATGAACTTTGGATCTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | AATAAAAGATCCAAAGTTCATTCTAATGGAAAGTCCTaGGTTTACACGGATGATCCATCGGCAAACAACACC | + |
|
Preference number: 6 (lower is better) Translates to: NKRSKVHSNGKS*VYTDDPSANNT Trigger: GGTGTTGTTTGCCGATGGATCATCCGTGTAAACCAAGGACTTTCCATTAGAATGAACTTTGGATCTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | TATCATACTTTCAGTGATGTTGTATTCTGGCAGCTGTaGCTGGCACTTTTCATTGGATATAAGAGGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: YHTFSDVVFWQL*LALFIGYKRNI Trigger: GATGTTCCTCTTATATCCAATGAAAAGTGCCAGCAACAGCTGCCAGAATACAACATCACTGAAAGTATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS TCA 72 bp | AGACTACTTGATTCAAAGATCTCGTCTATCATTTGCTaGAGGTCAAAAGCAAGAACTTTGAAATCCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLDSKISSIIC*RSKARTLKSTE Trigger: CTCTGTGGATTTCAAAGTTCTTGCTTTTGACCTTCAGCAAATGATAGACGAGATCTTTGAATCAAGTAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS GCA 72 bp | ATCAATATGGAGAGTGACCAGTTGGCTGGATATATTTaGTTCAATGCCCTGAATCAGTTCTTCTTTTACATT | + |
|
Preference number: 6 (lower is better) Translates to: INMESDQLAGYI*FNALNQFFFYI Trigger: AATGTAAAAGAAGAACTGATTCAGGGCATTGAAGCAAATATATCCAGCCAACTGGTCACTCTCCATATTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CCA 72 bp | GATTTATGGTTGCATTGCAATAGAATCAAGGAATCTTaGGAGCATTGTAGACTAGGAGTTAGTATCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLWLHCNRIKES*EHCRLGVSIKL Trigger: AAGCTTGATACTAACTCCTAGTCTACAATGCTCCCAAGATTCCTTGATTCTATTGCAATGCAACCATAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||
| CDS CAA 72 bp | AGGGCTATTGTACTGCAACCTCGGTTTCTGAAAGCATaGAACACAACCTTAAATTCTCCTGTTTCATTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RAIVLQPRFLKA*NTTLNSPVSFN Trigger: ATTAAATGAAACAGGAGAATTTAAGGTTGTGTTCAATGCTTTCAGAAACCGAGGTTGCAGTACAATAGCCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023566.11 ENSMUST00000060402.6 |
||