RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMPRSS12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045631

Ensembl transcript IDs: ENSMUST00000096200.6

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTATTCCAAATACAGAGTTATGAATCAGGGTCTAGTGAGAAAACATaGGGTTTGGTGCCAAAAGTCACAACTATGTACTTGTCACAATCC +
Preference number: 1 (lower is better)
Translates to: VFQIQSYESGSSEKT*GLVPKVTTMYLSQS
Trigger: GGATTGTGACAAGTACATAGTTGTGACTTTTGGCACCAAACCCCATGTTTTCTCACTAGACCCTGATTCATAACTCTGTATTTGGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 90 bp ACAGTGGCCTGTCCCAGCGCAGAGCCCTCCCTAAGGGACAGTGAGTaGAGCTCAGAGTACGCAAAGGCGCCGCCCAGGCACAGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: TVACPSAEPSLRDSE*SSEYAKAPPRHSSA
Trigger: CGCGCTGCTGTGCCTGGGCGGCGCCTTTGCGTACTCTGAGCTGCACTCACTGTCCCTTAGGGAGGGCTCTGCGCTGGGACAGGCCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS TCA 90 bp TGGCACAGTGGCCTGTCCCAGCGCAGAGCCCTCCCTAAGGGACAGTaGGTGCAGCTCAGAGTACGCAAAGGCGCCGCCCAGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: WHSGLSQRRALPKGQ*VQLRVRKGAAQAQQ
Trigger: CTGCTGTGCCTGGGCGGCGCCTTTGCGTACTCTGAGCTGCACTCACTGTCCCTTAGGGAGGGCTCTGCGCTGGGACAGGCCACTGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp TATTCCACAATCCTTCGTGACCGGCTGCTCCTCTTCCGGCGGCCCTaGCACAGTGGCCTGTCCCAGCGCAGAGCCCTCCCTAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: YSTILRDRLLLFRRP*HSGLSQRRALPKGQ
Trigger: CTGTCCCTTAGGGAGGGCTCTGCGCTGGGACAGGCCACTGTGCCAGGGCCGCCGGAAGAGGAGCAGCCGGTCACGAAGGATTGTGGAATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 90 bp ACTGCACCTCTAAGTGGTGCTATTCCACAATCCTTCGTGACCGGCTaGTCCTCTTCCGGCGGCCCTGGCACAGTGGCCTGTCCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: TAPLSGAIPQSFVTG*SSSGGPGTVACPSA
Trigger: TGCGCTGGGACAGGCCACTGTGCCAGGGCCGCCGGAAGAGGAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 90 bp CGAACCTCCTATAATCCGAGACCCTTCCACTGCACCTCTAAGTGGTaGTATTCCACAATCCTTCGTGACCGGCTGCTCCTCTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RTSYNPRPFHCTSKW*YSTILRDRLLLFRR
Trigger: CCGCCGGAAGAGGAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATAGGAGGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp TTGCGAACCTCCTATAATCCGAGACCCTTCCACTGCACCTCTAAGTaGTGCTATTCCACAATCCTTCGTGACCGGCTGCTCCTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LRTSYNPRPFHCTSK*CYSTILRDRLLLFR
Trigger: CCGGAAGAGGAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATAGGAGGTTCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 90 bp ACCAGTGTCAGCTTGCGAACCTCCTATAATCCGAGACCCTTCCACTaGACCTCTAAGTGGTGCTATTCCACAATCCTTCGTGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: TSVSLRTSYNPRPFH*TSKWCYSTILRDRL
Trigger: CAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATAGGAGGTTCGCAAGCTGACACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 90 bp CCTGTGATAAATAATGTGTCATCCACTCCTGGAAGAAGCTCGGGTTaGTGTAGACACCGGGGAAATGTCTCCGCCCACAGCCATGTCCGT +
Preference number: 5 (lower is better)
Translates to: PVINNVSSTPGRSSG*CRHRGNVSAHSHVR
Trigger: ACGGACATGGCTGTGGGCGGAGACATTTCCCCGGTGTCTACAGCAACCCGAGCTTCTTCCAGGAGTGGATGACACATTATTTATCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp ATGCATAAGAATATCGCCATCTTGAACCTGCAGGCTAACCTGCCATaGCCACGCACCAGTGTCAGCTTGCGAACCTCCTATAATCCGAGA +
Preference number: 5 (lower is better)
Translates to: MHKNIAILNLQANLP*PRTSVSLRTSYNPR
Trigger: TCTCGGATTATAGGAGGTTCGCAAGCTGACACTGGTGCGTGGCCATGGCAGGTTAGCCTGCAGGTTCAAGATGGCGATATTCTTATGCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp ATGAGTCAAAGGTCCCATTTTCGTGACCTGCACAGAATGAAGTGTTaGGAATCATTCCACTGTAGCCCTGGTCAGAGCTGCAAACCTCCC +
Preference number: 5 (lower is better)
Translates to: MSQRSHFRDLHRMKC*ESFHCSPGQSCKPP
Trigger: GGGAGGTTTGCAGCTCTGACCAGGGCTACAGTGGAATGATTCCCAACACTTCATTCTGTGCAGGTCACGAAAATGGGACCTTTGACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS TCA 90 bp TCATTCCACTGTAGCCCTGGTCAGAGCTGCAAACCTCCCGAGAGATaGAGTGTACTTTCGCCTCTTGTAAAATGGTTGTGCCATTGCCTT +
Preference number: 5 (lower is better)
Translates to: SFHCSPGQSCKPPER*SVLSPLVKWLCHCL
Trigger: AAGGCAATGGCACAACCATTTTACAAGAGGCGAAAGTACACTTCATCTCTCGGGAGGTTTGCAGCTCTGACCAGGGCTACAGTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp GAACAGTGCGATATCATTTACGAAAGTTTCCATAATGAAATCTGGTaGTATGATGATGTCTGTGATTCGTATATTCCTGCTGTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: EQCDIIYESFHNEIW*YDDVCDSYIPAVVG
Trigger: CCCTACCACAGCAGGAATATACGAATCACAGACATCATCATACCACCAGATTTCATTATGGAAACTTTCGTAAATGATATCGCACTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 90 bp ACGGAACAGTGCGATATCATTTACGAAAGTTTCCATAATGAAATCTaGTGGTATGATGATGTCTGTGATTCGTATATTCCTGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: TEQCDIIYESFHNEI*WYDDVCDSYIPAVV
Trigger: TACCACAGCAGGAATATACGAATCACAGACATCATCATACCACCAGATTTCATTATGGAAACTTTCGTAAATGATATCGCACTGTTCCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 72 bp ATCCTTCGTGACCGGCTGCTCCTCTTCCGGCGGCCCTaGCACAGTGGCCTGTCCCAGCGCAGAGCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: ILRDRLLLFRRP*HSGLSQRRALP
Trigger: AGGGAGGGCTCTGCGCTGGGACAGGCCACTGTGCCAGGGCCGCCGGAAGAGGAGCAGCCGGTCACGAAGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS TCA 72 bp GGCCTGTCCCAGCGCAGAGCCCTCCCTAAGGGACAGTaGGTGCAGCTCAGAGTACGCAAAGGCGCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: GLSQRRALPKGQ*VQLRVRKGAAQ
Trigger: CTGGGCGGCGCCTTTGCGTACTCTGAGCTGCACTCACTGTCCCTTAGGGAGGGCTCTGCGCTGGGACAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 72 bp CTAAGTGGTGCTATTCCACAATCCTTCGTGACCGGCTaGTCCTCTTCCGGCGGCCCTGGCACAGTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: LSGAIPQSFVTG*SSSGGPGTVAC
Trigger: ACAGGCCACTGTGCCAGGGCCGCCGGAAGAGGAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CAA 72 bp CAGGCTAACCTGCCATGGCCACGCACCAGTGTCAGCTaGCGAACCTCCTATAATCCGAGACCCTTCCACTGC +
Preference number: 6 (lower is better)
Translates to: QANLPWPRTSVS*RTSYNPRPFHC
Trigger: GCAGTGGAAGGGTCTCGGATTATAGGAGGTTCGCAAGCTGACACTGGTGCGTGGCCATGGCAGGTTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 72 bp AGGCTAACCTGCCATGGCCACGCACCAGTGTCAGCTTaGGAACCTCCTATAATCCGAGACCCTTCCACTGCA +
Preference number: 6 (lower is better)
Translates to: RLTCHGHAPVSA*EPPIIRDPSTA
Trigger: TGCAGTGGAAGGGTCTCGGATTATAGGAGGTTCGCAAGCTGACACTGGTGCGTGGCCATGGCAGGTTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 72 bp TATAATCCGAGACCCTTCCACTGCACCTCTAAGTGGTaGTATTCCACAATCCTTCGTGACCGGCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: YNPRPFHCTSKW*YSTILRDRLLL
Trigger: GAGGAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 72 bp TCCTATAATCCGAGACCCTTCCACTGCACCTCTAAGTaGTGCTATTCCACAATCCTTCGTGACCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SYNPRPFHCTSK*CYSTILRDRLL
Trigger: GAGCAGCCGGTCACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS TCA 72 bp TGTAGCCCTGGTCAGAGCTGCAAACCTCCCGAGAGATaGAGTGTACTTTCGCCTCTTGTAAAATGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: CSPGQSCKPPER*SVLSPLVKWLC
Trigger: GCACAACCATTTTACAAGAGGCGAAAGTACACTTCATCTCTCGGGAGGTTTGCAGCTCTGACCAGGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS GCA 72 bp AGCTTGCGAACCTCCTATAATCCGAGACCCTTCCACTaGACCTCTAAGTGGTGCTATTCCACAATCCTTCGT +
Preference number: 6 (lower is better)
Translates to: SLRTSYNPRPFH*TSKWCYSTILR
Trigger: ACGAAGGATTGTGGAATAGCACCACTTAGAGGTGCAGTGGAAGGGTCTCGGATTATAGGAGGTTCGCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 72 bp CCTAGTAGGATGACAGAACCTAGGGCTGTGAGGACCTaGCCAAGTACTATGTCCATATTAAACAGGCGGTTG +
Preference number: 6 (lower is better)
Translates to: PSRMTEPRAVRT*PSTMSILNRRL
Trigger: CAACCGCCTGTTTAATATGGACATAGTACTTGGCCAGGTCCTCACAGCCCTAGGTTCTGTCATCCTACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS TCA 72 bp CTGTCACCCCTGCATGAGTCAAAGGTCCCATTTTCGTaGCCTGCACAGAATGAAGTGTTGGGAATCATTCCA +
Preference number: 6 (lower is better)
Translates to: LSPLHESKVPFS*PAQNEVLGIIP
Trigger: TGGAATGATTCCCAACACTTCATTCTGTGCAGGTCACGAAAATGGGACCTTTGACTCATGCAGGGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6
CDS CCA 72 bp GATATCATTTACGAAAGTTTCCATAATGAAATCTGGTaGTATGATGATGTCTGTGATTCGTATATTCCTGCT +
Preference number: 6 (lower is better)
Translates to: DIIYESFHNEIW*YDDVCDSYIPA
Trigger: AGCAGGAATATACGAATCACAGACATCATCATACCACCAGATTTCATTATGGAAACTTTCGTAAATGATATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096200.6