Pregenerated sensors for TMPRSS11G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079451Ensembl transcript IDs: ENSMUST00000134179.8, ENSMUST00000140095.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAGCCAGAGGCCATGTGTaGCACTCCAGGGTGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEARGHV*HSRVDK Trigger: TTTATCCACCCTGGAGTGTCACACATGGCCTCTGGC...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTTGTGACACTCCAGGGTaGATAAAGGGGTGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: VDLCEADGIYFVHSQWNPCDTPG*IKGWLW Trigger: CCACAGCCACCCCTTTATCCACCCTGGAGTGTCACA...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGCCAGAGGCCATGTGTaGCACTCCAGGGTGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSARGHV*HSRVDK Trigger: TTTATCCACCCTGGAGTGTCACACATGGCCTCTGGC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACCTTCTGAAGGTCACTaGGACATACTCATTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEPSEGH*DILICI Trigger: GATGCAAATGAGTATGTCGCAGTGACCTTCAGAAGG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTAAGTCTGTCCCCTTCTaGAGGTCACTGCGACATACT | + |
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Preference number: 2 (lower is better) Translates to: VDLCEADGIYFVHSQWNPKSVPF*RSLRHT Trigger: AGTATGTCGCAGTGACCTTCAGAAGGGGACAGACTT...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTACATGGAATAAGGTTTaGCAGAGGCCATGTGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VDLCEADGIYFVHSQWNPTWNKV*QRPCVT Trigger: TGTCACACATGGCCTCTGGCAAACCTTATTCCATGT...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCACATGGAATAAGGTTTaGCAGAGGCCATGTGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSTWNKV*QRPCVT Trigger: TGTCACACATGGCCTCTGGCAAACCTTATTCCATGT...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCCTTCTGAAGGTCACTaGGACATACTCATTTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSPSEGH*DILICI Trigger: GATGCAAATGAGTATGTCGCAGTGACCTTCAGAAGG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCTACTCATTTGCATCTTaGGCTAAATGGCAATGCACA | + |
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Preference number: 2 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSYSFAS*AKWQCT Trigger: TGTGCATTGCCATTTAGCTCAAGATGCAAATGAGTA...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR TCA 72 bp | GATGAACATGGAATAAGGTTTGCCAGAGGCCATGTGTaGCACTCCAGGGTGGATAAAGGGGTGGCTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DEHGIRFARGHV*HSRVDKGVAVA Trigger: TGCCACAGCCACCCCTTTATCCACCCTGGAGTGTCACACATGGCCTCTGGCAAACCTTATTCCATGTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR GCA 72 bp | GAGAACAGAGGTGAGCAGGGAGGTAATCAGACACTTTaGAGAATGGTAGATCTTTGTGAAGCTGATGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: ENRGEQGGNQTL*RMVDLCEADGI Trigger: GATGCCATCAGCTTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR TCA 72 bp | TCAGATCCAGTGTTTCCTTCATTATTATGTCACCATTaGCTTAGACTAGCTAATGTGGCCTGTCCATTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SDPVFPSLLCHH*LRLANVACPFS Trigger: GCTGAATGGACAGGCCACATTAGCTAGTCTAAGTCAATGGTGACATAATAATGAAGGAAACACTGGATCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| 3UTR CCA 72 bp | TGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATaGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CEADGIYFVHSQ*NPSNDVKGSLS Trigger: GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACACCGCAGAGGTGGATaGCTTCCACCTGCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEHRRGG*LPPAGC Trigger: GCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACTTCCACCTGCAGGCTaGTTTGCCAAGGCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCELPPAG*FAKAKK Trigger: CTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAGATTCTTGCTATGGGTaGGTACTCCATCCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEDSCYG*VLHPRA Trigger: GGCTCGGGGATGGAGTACCCACCCATAGCAAGAATC...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCACCGCAGAGGTGGATaGCTTCCACCTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSHRRGG*LPPAGC Trigger: GCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAGGGAAAGGGACCATTTaGTTTCAGTGCTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEGKGTI*FQCSPS Trigger: GGATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCC...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR TCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAGTGCTCCCCATCCGGTaGCAAACACTTTACTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEVLPIR*QTLYSL Trigger: CAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCAC...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACGTCTCTCTTCAAGATaGTCTGGGAGGACTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCERLSSR*SGRTAT Trigger: AGTTGCAGTCCTCCCAGAGCATCTTGAAGAGAGACG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGAAGCACCGCAGAGGTaGATGCCTTCCACCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSEAPQR*MPSTCR Trigger: CCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTCTTCCACCTGCAGGCTaGTTTGCCAAGGCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPLPPAG*FAKAKK Trigger: CTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAG...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCTGGATGCCTTCCACCTaGAGGCTGCTTTGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSWMPST*RLLCQG Trigger: GCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCA...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTACCTGCAGGCTGCTTTaGCAAGGCCAAGAAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPTCRLL*QGQEAL Trigger: CAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGT...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGATTCTTGCTATGGGTaGGTACTCCATCCCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSDSCYG*VLHPRA Trigger: GGCTCGGGGATGGAGTACCCACCCATAGCAAGAATC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACCTCTTGCAGAGAATTaGGAAAGGGACCATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEPLAEN*ERDHLL Trigger: AAGCAAATGGTCCCTTTCCCAATTCTCTGCAAGAGG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAGACTGCAACTTCTCCTaGAAAATGTTATCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEDCNFS*KMLSAC Trigger: GCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTC...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCACCTGCAGGCTGCTTTaGCAAGGCCAAGAAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSTCRLL*QGQEAL Trigger: CAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGT...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGGGAAAGGGACCATTTaGTTTCAGTGCTCCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSGKGTI*FQCSPS Trigger: GGATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR TCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGTGCTCCCCATCCGGTaGCAAACACTTTACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSVLPIR*QTLYSL Trigger: CAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCAC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCGTCTCTCTTCAAGATaGTCTGGGAGGACTGCAACT | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSRLSSR*SGRTAT Trigger: AGTTGCAGTCCTCCCAGAGCATCTTGAAGAGAGACG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAATCTATTTCAACCTCTTaGAGAGAATTGGGAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCESISTS*RELGKG Trigger: TCCCTTTCCCAATTCTCTGCAAGAGGTTGAAATAGA...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR TCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACTCTTTGGACAAATCTaGGCTATAATTAATACTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCELFGQI*AIINTG Trigger: CCCAGTATTAATTATAGCTCAGATTTGTCCAAAGAG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAAAACACTTTACTCTTTaGCAAGACTTGAAAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEKHFTL*QDLKSR Trigger: GCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTT...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTGGGAGACAGACTCTGTaGAAATTTTCAGAAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPGRQTL*KFSENS Trigger: GCTGTTTTCTGAAAATTTGCACAGAGTCTGTCTCCC...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAATTACTGTCCACAGTTTaGGGTTTTTGTAATTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: RGEQGGNQTLCRMVDLCELLSTV*GFCNCQ Trigger: TTGACAATTACAAAAACCCCAAACTGTGGACAGTAA...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCCTCTTGCAGAGAATTaGGAAAGGGACCATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSPLAEN*ERDHLL Trigger: AAGCAAATGGTCCCTTTCCCAATTCTCTGCAAGAGG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTGATAATGAGTCACTCTaGTGTAAATTCCGGGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPDNESL*CKFRAC Trigger: ACAAGCCCGGAATTTACACCAGAGTGACTCATTATC...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR TCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTCTTATTTCTATTATCTaGAATAACCAGAGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPLISII*NNQRPS Trigger: GGAGGGCCTCTGGTTATTTCAGATAATAGAAATAAG...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGACTGCAACTTCTCCTaGAAAATGTTATCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSDCNFS*KMLSAC Trigger: GCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR GCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTGTGTTCTGCTTGTGCTaGGTTCATTTCTCTAAGATA | + |
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Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPVFCLC*VHFSKI Trigger: TATCTTAGAGAAATGAACGCAGCACAAGCAGAACAC...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134179.8 |
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| CDS-3UTR GCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGGGAGACAGACTCTGTaGAAATTTTCAGAAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSGRQTL*KFSENS Trigger: GCTGTTTTCTGAAAATTTGCACAGAGTCTGTCTCCC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CCA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCGATAATGAGTCACTCTaGTGTAAATTCCGGGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSDNESL*CKFRAC Trigger: ACAAGCCCGGAATTTACACCAGAGTGACTCATTATC...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR TCA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTCTCTTTGGACAAATCTaGGCTATAATTAATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VDLCEADGIYFVHSQWNPLFGQI*AIINTG Trigger: CCCAGTATTAATTATAGCTCAGATTTGTCCAAAGAG...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS CCA 90 bp | GAGGTCACGAGCCACTGGGATCCAATGAGAGAAGCACCGCAGAGGTaGATGCCTTCCACCTGCAGGCTGCTTTGCCAAGGCCAAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVTSHWDPMREAPQR*MPSTCRLLCQGQEA Trigger: AGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTCTCTCATTGGATCCCAGTGGCTCGTGACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS TCA 90 bp | AATTGTCAAAGCAGTGAGCTGAGGTCACGAGCCACTGGGATCCAATaGGAGAAGCACCGCAGAGGTGGATGCCTTCCACCTGCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NCQSSELRSRATGIQ*EKHRRGGCLPPAGC Trigger: GCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTCTCTCATTGGATCCCAGTGGCTCGTGACCTCAGCTCACTGCTTTGACAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | AGAGAAGCACCGCAGAGGTGGATGCCTTCCACCTGCAGGCTGCTTTaGCAAGGCCAAGAAGCTTTGTCTGCAGGTTTGCCATCAGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: REAPQRWMPSTCRLL*QGQEALSAGLPSAI Trigger: AATCGCTGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | GCCTTCCACCTGCAGGCTGCTTTGCCAAGGCCAAGAAGCTTTGTCTaGAGGTTTGCCATCAGCGATTCTTGCTATGGGTGGGTACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFHLQAALPRPRSFV*RFAISDSCYGWVLH Trigger: ATGGAGTACCCACCCATAGCAAGAATCGCTGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS TCA 90 bp | TACTGTCCACAGTTTGGGGTTTTTGTAATTGTCAAAGCAGTGAGCTaGGGTCACGAGCCACTGGGATCCAATGAGAGAAGCACCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YCPQFGVFVIVKAVS*GHEPLGSNERSTAE Trigger: CTCTGCGGTGCTTCTCTCATTGGATCCCAGTGGCTCGTGACCTCAGCTCACTGCTTTGACAATTACAAAAACCCCAAACTGTGGACAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | CTTCTCATCATACACCAAAAAGTAAACAAGGAGACCAATGAGCACTaGCAAAGCCAGCAAAAGAGCCACGGTAATGAGGGCGACCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLIIHQKVNKETNEH*QSQQKSHGNEGDRP Trigger: TGGACGGTCGCCCTCATTACCGTGGCTCTTTTGCTGGCTTTGGCAGTGCTCATTGGTCTCCTTGTTTACTTTTTGGTGTATGATGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | GAAGCGTCTCTCTTCAAGATGCTCTGGGAGGACTGCAACTTCTCCTaGAAAATGTTATCAGCTTGCCGTTTCAAAGTACCCGCATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EASLFKMLWEDCNFS*KMLSACRFKVPAFL Trigger: TAAGAATGCGGGTACTTTGAAACGGCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTCCTCCCAGAGCATCTTGAAGAGAGACGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS CCA 90 bp | ATTTGCTTTCAGTGCTCCCCATCCGGTGACAAACACTTTACTCTTTaGCAAGACTTGAAAAGTCGCATCAGGGAGACAGACTCTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ICFQCSPSGDKHFTL*QDLKSRIRETDSVQ Trigger: TTGCACAGAGTCTGTCTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCACTGAAAGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS TCA 90 bp | AGTGCTCCCCATCCGGTGACAAACACTTTACTCTTTGGCAAGACTTaGAAAGTCGCATCAGGGAGACAGACTCTGTGCAAATTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAPHPVTNTLLFGKT*KVASGRQTLCKFSE Trigger: TTCTGAAAATTTGCACAGAGTCTGTCTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | GATCTCTATTTCAACCTCTTGCAGAGAATTGGGAAAGGGACCATTTaGTTTCAGTGCTCCCCATCCGGTGACAAACACTTTACTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLYFNLLQRIGKGTI*FQCSPSGDKHFTLW Trigger: CCAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCCAATTCTCTGCAAGAGGTTGAAATAGAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTCACCTGCAGGCTGCTTaGCCAAGGCCAAGAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VDLCEADGIYFVHSQWNPHLQAA*PRPRSF Trigger: AAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTG...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAAACTCTTTGGCAAGACTaGAAAAGTCGCATCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGEQGGNQTLCRMVDLCETLWQD*KSRIRE Trigger: CTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGT...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 90 bp | AGTACCCGCATTCTTACGGGGAATCTGAAATTTAATCAGTACATCTaGCTTTACCCCATCGTTACTGGGCCGAAAGTTGACAACTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STRILTGNLKFNQYI*LYPIVTGPKVDNLR Trigger: TCTCAAGTTGTCAACTTTCGGCCCAGTAACGATGGGGTAAAGGCAGATGTACTGATTAAATTTCAGATTCCCCGTAAGAATGCGGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCACCTGCAGGCTGCTTaGCCAAGGCCAAGAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSHLQAA*PRPRSF Trigger: AAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTTGGGAAAGGGACCATTaGCTTTCAGTGCTCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VDLCEADGIYFVHSQWNPWERDH*LSVLPI Trigger: GATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCCA...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS TCA 90 bp | TTGTTTCAGGCCAGTCCGAAATTTCGACTGCTCTTTGGACAAATCTaGGCTATAATTAATACTGGGAATCCAGAAGGAGGCCTGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LFQASPKFRLLFGQI*AIINTGNPEGGLVV Trigger: TACTACCAGGCCTCCTTCTGGATTCCCAGTATTAATTATAGCTCAGATTTGTCCAAAGAGCAGTCGAAATTTCGGACTGGCCTGAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACTCATTGCTGATTTTTaGTTTCAGGCCAGTCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGEQGGNQTLCRMVDLCELIADF*FQASPK Trigger: TTTCGGACTGGCCTGAAACAAAAAATCAGCAATGAG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS-3UTR CAA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTCAAGGCCAAGAAGCTTaGTCTGCAGGTTTGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VDLCEADGIYFVHSQWNPQGQEA*SAGLPS Trigger: TGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTG...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCTGGGAAAGGGACCATTaGCTTTCAGTGCTCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSWERDH*LSVLPI Trigger: GATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCCA...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | GTAGATCTTTGTGAAGCTGATGGCATCTATTTTGTTCATAGTCAATGGAACCCTACTCTTTGGCAAGACTaGAAAAGTCGCATCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VDLCEADGIYFVHSQWNPTLWQD*KSRIRE Trigger: CTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGT...AGGGTTCCATTGACTATGAACAAAATAGATGCCATCAGCTTCACAAAGATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACAAACACTTTACTCTTaGGCAAGACTTGAAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEQTLYS*ARLEKS Trigger: CGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGGGAGGTAATCAGACACTTTGCAGAATGGTAGATCTTTGTGAACCGAAAGTTGACAACTaGAGATTTGACATAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGEQGGNQTLCRMVDLCEPKVDN*RFDIMM Trigger: CATCATTATGTCAAATCTCAAGTTGTCAACTTTCGG...TTCACAAAGATCTACCATTCTGCAAAGTGTCTGATTACCTCCCTGCTCACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCACCTCTTGCAGAGAATaGGGAAAGGGACCATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSTSCRE*GKGPFA Trigger: AGCAAATGGTCCCTTTCCCAATTCTCTGCAAGAGGT...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCTCTATTTCAACCTCTaGCAGAGAATTGGGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSLYFNL*QRIGKG Trigger: CCCTTTCCCAATTCTCTGCAAGAGGTTGAAATAGAG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCTCATTGCTGATTTTTaGTTTCAGGCCAGTCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSLIADF*FQASPK Trigger: TTTCGGACTGGCCTGAAACAAAAAATCAGCAATGAG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCAAACACTTTACTCTTaGGCAAGACTTGAAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSQTLYS*ARLEKS Trigger: CGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS-3UTR CAA 90 bp | TATTTTGTTCATAGTCAATGGAACCCTTCCAATGATGTAAAAGGAAGTCTGTCCCCGAAAGTTGACAACTaGAGATTTGACATAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: YFVHSQWNPSNDVKGSLSPKVDN*RFDIMM Trigger: CATCATTATGTCAAATCTCAAGTTGTCAACTTTCGG...GGACAGACTTCCTTTTACATCATTGGAAGGGTTCCATTGACTATGAACAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CCA 72 bp | AGCCACTGGGATCCAATGAGAGAAGCACCGCAGAGGTaGATGCCTTCCACCTGCAGGCTGCTTTGCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHWDPMREAPQR*MPSTCRLLCQG Trigger: GCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTCTCTCATTGGATCCCAGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS GCA 72 bp | CCGCAGAGGTGGATGCCTTCCACCTGCAGGCTGCTTTaGCAAGGCCAAGAAGCTTTGTCTGCAGGTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQRWMPSTCRLL*QGQEALSAGLP Trigger: TGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CAA 72 bp | ACCGCAGAGGTGGATGCCTTCCACCTGCAGGCTGCTTaGCCAAGGCCAAGAAGCTTTGTCTGCAGGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TAEVDAFHLQAA*PRPRSFVCRFA Trigger: GGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS CAA 90 bp | GAGAGAAGCACCGCAGAGGTGGATGCCTTCCACCTGCAGGCTGCTTaGCCAAGGCCAAGAAGCTTTGTCTGCAGGTTTGCCATCAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERSTAEVDAFHLQAA*PRPRSFVCRFAISD Trigger: ATCGCTGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCACCTCTGCGGTGCTTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CAA 90 bp | TGGATGCCTTCCACCTGCAGGCTGCTTTGCCAAGGCCAAGAAGCTTaGTCTGCAGGTTTGCCATCAGCGATTCTTGCTATGGGTGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WMPSTCRLLCQGQEA*SAGLPSAILAMGGY Trigger: GTACCCACCCATAGCAAGAATCGCTGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAGGTGGAAGGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | CTGCAGGCTGCTTTGCCAAGGCCAAGAAGCTTTGTCTaGAGGTTTGCCATCAGCGATTCTTGCTATGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQAALPRPRSFV*RFAISDSCYGW Trigger: CCACCCATAGCAAGAATCGCTGATGGCAAACCTGCAGACAAAGCTTCTTGGCCTTGGCAAAGCAGCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CCA 72 bp | GTCTGCAGGTTTGCCATCAGCGATTCTTGCTATGGGTaGGTACTCCATCCCCGAGCCGCAGTCTCTAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: VCRFAISDSCYG*VLHPRAAVSKI Trigger: TATCTTAGAGACTGCGGCTCGGGGATGGAGTACCCACCCATAGCAAGAATCGCTGATGGCAAACCTGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140095.2 |
||
| CDS CCA 72 bp | CAGCAAAAGAGCCACGGTAATGAGGGCGACCGTCCATaGTTTCCAGACACGTTTTCTTCTAACCAGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QQKSHGNEGDRP*FPDTFSSNQYS Trigger: GGAATACTGGTTAGAAGAAAACGTGTCTGGAAACCATGGACGGTCGCCCTCATTACCGTGGCTCTTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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| CDS CCA 72 bp | CAGTGCTCCCCATCCGGTGACAAACACTTTACTCTTTaGCAAGACTTGAAAAGTCGCATCAGGGAGACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QCSPSGDKHFTL*QDLKSRIRETD Trigger: GTCTGTCTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTGTCACCGGATGGGGAGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS TCA 72 bp | CAGTTTGGGGTTTTTGTAATTGTCAAAGCAGTGAGCTaGGGTCACGAGCCACTGGGATCCAATGAGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QFGVFVIVKAVS*GHEPLGSNERS Trigger: GCTTCTCTCATTGGATCCCAGTGGCTCGTGACCTCAGCTCACTGCTTTGACAATTACAAAAACCCCAAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | AGTGAAGCGTCTCTCTTCAAGATGCTCTGGGAGGACTaGAACTTCTCCTGCAAAATGTTATCAGCTTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SEASLFKMLWED*NFSCKMLSACR Trigger: ACGGCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTCCTCCCAGAGCATCTTGAAGAGAGACGCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | ATACACCAAAAAGTAAACAAGGAGACCAATGAGCACTaGCAAAGCCAGCAAAAGAGCCACGGTAATGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IHQKVNKETNEH*QSQQKSHGNEG Trigger: GCCCTCATTACCGTGGCTCTTTTGCTGGCTTTGGCAGTGCTCATTGGTCTCCTTGTTTACTTTTTGGTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | GAGGACTGCAACTTCTCCTGCAAAATGTTATCAGCTTaGCGTTTCAAAGTACCCGCATTCTTACGGGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: EDCNFSCKMLSA*RFKVPAFLRGI Trigger: GATTCCCCGTAAGAATGCGGGTACTTTGAAACGGCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | CTCTTCAAGATGCTCTGGGAGGACTGCAACTTCTCCTaGAAAATGTTATCAGCTTGCCGTTTCAAAGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: LFKMLWEDCNFS*KMLSACRFKVP Trigger: GGGTACTTTGAAACGGCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTCCTCCCAGAGCATCTTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS GCA 72 bp | TTCAACCTCTTGCAGAGAATTGGGAAAGGGACCATTTaGTTTCAGTGCTCCCCATCCGGTGACAAACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FNLLQRIGKGTI*FQCSPSGDKHF Trigger: AAAGTGTTTGTCACCGGATGGGGAGCACTGAAAGCAAATGGTCCCTTTCCCAATTCTCTGCAAGAGGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CAA 72 bp | CCATCCGGTGACAAACACTTTACTCTTTGGCAAGACTaGAAAAGTCGCATCAGGGAGACAGACTCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSGDKHFTLWQD*KSRIRETDSVQ Trigger: TTGCACAGAGTCTGTCTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTGTCACCGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS CAA 90 bp | GATGCTCTGGGAGGACTGCAACTTCTCCTGCAAAATGTTATCAGCTaGCCGTTTCAAAGTACCCGCATTCTTACGGGGAATCTGAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: DALGGLQLLLQNVIS*PFQSTRILTGNLKF Trigger: AAATTTCAGATTCCCCGTAAGAATGCGGGTACTTTGAAACGGCAAGCTGATAACATTTTGCAGGAGAAGTTGCAGTCCTCCCAGAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
||
| CDS TCA 72 bp | CATCCGGTGACAAACACTTTACTCTTTGGCAAGACTTaGAAAGTCGCATCAGGGAGACAGACTCTGTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HPVTNTLLFGKT*KVASGRQTLCK Trigger: TTTGCACAGAGTCTGTCTCCCTGATGCGACTTTTCAAGTCTTGCCAAAGAGTAAAGTGTTTGTCACCGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134179.8 ENSMUST00000140095.2 |
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