RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMPRSS11B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035861

Ensembl transcript IDs: ENSMUST00000038448.7

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGAATGGCTAAGGTTAAGAGGCCTGGATGTTCTTTCAATAGACTaGGGTTCAATTCCCAGCACCTATAGGGTGGCTCATATGGTCTGT +
Preference number: 1 (lower is better)
Translates to: WEWLRLRGLDVLSID*GSIPSTYRVAHMVC
Trigger: ACAGACCATATGAGCCACCCTATAGGTGCTGGGAATTGAACCCCAGTCTATTGAAAGAACATCCAGGCCTCTTAACCTTAGCCATTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR TCA 90 bp CTAAAGCTGTACTACAGAACAATTGTGATAAAAACTGCATGGCACTaGTACAGCGACAGACAGGTAGATCAATGGAATAGAATTGAAGAC +
Preference number: 1 (lower is better)
Translates to: LKLYYRTIVIKTAWH*YSDRQVDQWNRIED
Trigger: GTCTTCAATTCTATTCCATTGATCTACCTGTCTGTCGCTGTATCAGTGCCATGCAGTTTTTATCACAATTGTTCTGTAGTACAGCTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR TCA 90 bp TTTACCAGTATTTTGGTGGGAGTACTTTCTTGGCTAAGGGCTTCCTaGACTAAGAAACTCAAGGTCTCTAATTTTGTCTTGTTTAGTTTG +
Preference number: 1 (lower is better)
Translates to: FTSILVGVLSWLRAS*TKKLKVSNFVLFSL
Trigger: CAAACTAAACAAGACAAAATTAGAGACCTTGAGTTTCTTAGTTCAGGAAGCCCTTAGCCAAGAAAGTACTCCCACCAAAATACTGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp CCACTTCCTGGCCCTGGCAATCCCCTATACTGGGGCATAGAACCTTCACAAGACGGCCTCTCCTCCCATTaGTGGCTGACTAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: PLPGPGNPLYWGIEPSQDGLSSH*WLTRPS
Trigger: AGATGGCCTAGTCAGCCATCAATGGGAGGAGAGGCC...GTCTTGTGAAGGTTCTATGCCCCAGTATAGGGGATTGCCAGGGCCAGGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp TCCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTGGATCAAGGAACTCCATGGCTAAGGGCTTCCTaGACTAAGAAACTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: SILISWYKAQVQVDQGTPWLRAS*TKKLKV
Trigger: GACCTTGAGTTTCTTAGTTCAGGAAGCCCTTAGCCA...TGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR GCA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGGAAACTCAGAATGACTaGAGACCTGGTGAATGCATC +
Preference number: 2 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEEETQND*RPGECI
Trigger: GATGCATTCACCAGGTCTGCAGTCATTCTGAGTTTC...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp AAGAGAATACAGCTCCCTCTTCTGACCCCTAGGCATTTATGTGGTACAGGAAAAGAATTGGATGTTCAGTaGTATCGTACCAGGCGATAT +
Preference number: 2 (lower is better)
Translates to: KRIQLPLLTPRHLCGTGKELDVQ*YRTRRY
Trigger: ATATCGCCTGGTACGATATCACTGAACATCCAATTC...TTTTCCTGTACCACATAAATGCCTAGGGGTCAGAAGAGGGAGCTGTATTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp CCTGGTAAATCACTACAGTCAACACCATGTTTCCACAGTTACAAAGTCTATATGTACAGCTCCCTCTTCTaGCCCCTAGGCATTTATGTG +
Preference number: 2 (lower is better)
Translates to: PGKSLQSTPCFHSYKVYMYSSLF*PLGIYV
Trigger: CACATAAATGCCTAGGGGTCAGAAGAGGGAGCTGTA...CATATAGACTTTGTAACTGTGGAAACATGGTGTTGACTGTAGTGATTTACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CCA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGTCCATTCTTATCTCCTaGTACAAAGCTCAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEESILIS*YKAQVQ
Trigger: TTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 90 bp TCTGAGAGCTCTTGGTTTGACCATTACCCTGTCTCAGTGAAATTGTaGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGGCA +
Preference number: 2 (lower is better)
Translates to: SESSWFDHYPVSVKL*RMILNNSLCIYLQA
Trigger: TGCCTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGAGACAGGGTAATGGTCAAACCAAGAGCTCTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp AAGAGAATACAGCTCCCTCTTCTGACCCCTAGGCATTTATGTGGTACAGGAAAAGTTCTAACAGCAGCATaGGTTGTAAGACAGTATATT +
Preference number: 2 (lower is better)
Translates to: KRIQLPLLTPRHLCGTGKVLTAA*VVRQYI
Trigger: AATATACTGTCTTACAACTCATGCTGCTGTTAGAAC...TTTTCCTGTACCACATAAATGCCTAGGGGTCAGAAGAGGGAGCTGTATTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp CCTGGTAAATCACTACAGTCAACACCATGTTTCCACAGTTACAAAGTCTATATGATACTCATAAATACCTaGTGGGCTGATGGGCATACA +
Preference number: 2 (lower is better)
Translates to: PGKSLQSTPCFHSYKVYMILINT*WADGHT
Trigger: TGTATGCCCATCAGCCCATCAGGTATTTATGAGTAT...CATATAGACTTTGTAACTGTGGAAACATGGTGTTGACTGTAGTGATTTACCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR TCA 90 bp TTGCCAGCTTTCAAAAGCCATTTCATGGGTGAATACCTTAAAATAGCATTTCCTCCTTCCACAAAGCTCTaGCATGAAAATAGATCCCTC +
Preference number: 2 (lower is better)
Translates to: LPAFKSHFMGEYLKIAFPPSTKL*HENRSL
Trigger: GAGGGATCTATTTTCATGTCAGAGCTTTGTGGAAGG...AGGAAATGCTATTTTAAGGTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CCA 90 bp CCTGGTAAATCACTACAGTCAACACCATGTTTCCACAGTTACAAAGTCTATATGATTTCTGAGAGCTCTTaGTTTGACCATTACCCTGTC +
Preference number: 2 (lower is better)
Translates to: PGKSLQSTPCFHSYKVYMISESS*FDHYPV
Trigger: GACAGGGTAATGGTCAAACCAAGAGCTCTCAGAAAT...CATATAGACTTTGTAACTGTGGAAACATGGTGTTGACTGTAGTGATTTACCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CCA 90 bp TTGCCAGCTTTCAAAAGCCATTTCATGGGTGAATACCTTAAAATAGCATTTCCTAGCATTTTCAACAAATaGTGTTGGCTCAACTGGTGG +
Preference number: 2 (lower is better)
Translates to: LPAFKSHFMGEYLKIAFPSIFNK*CWLNWW
Trigger: CCACCAGTTGAGCCAACACCATTTGTTGAAAATGCT...AGGAAATGCTATTTTAAGGTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 90 bp ACATACAGTGTTTTCTGCACAGTTCTTCTCTATAGCAATCCTACTTaGTTACTGTTTGGATCTTCAGAGTACTTACAGCATGAAAAGATG +
Preference number: 2 (lower is better)
Translates to: TYSVFCTVLLYSNPT*LLFGSSEYLQHEKM
Trigger: CATCTTTTCATGCTGTAAGTACTCTGAAGATCCAAACAGTAACAAAGTAGGATTGCTATAGAGAAGAACTGTGCAGAAAACACTGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR GCA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACCTTAACAACAGCTTATaGATCTACTTACAGGCACAC +
Preference number: 2 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHLNNSL*IYLQAH
Trigger: GTGTGCCTGTAAGTAGATGCATAAGCTGTTGTTAAG...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CAA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACTGTTCCAACCCAACCTaGGGGAGGCACTACTGTCCC +
Preference number: 3 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHCSNPT*GRHYCP
Trigger: GGGACAGTAGTGCCTCCCCAAGGTTGGGTTGGAACA...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CAA 90 bp TACTGTCCCCTCATACAGCCTGGTAAATCACTACAGTCAACACCATGTTTCCACCCTGTCTCAGTGAAATaGTTGAGGATGATTCTTAAC +
Preference number: 3 (lower is better)
Translates to: YCPLIQPGKSLQSTPCFHPVSVK*LRMILN
Trigger: GTTAAGAATCATCCTCAACAATTTCACTGAGACAGG...GTGGAAACATGGTGTTGACTGTAGTGATTTACCAGGCTGTATGAGGGGACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CAA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACGGTGGGAGTACTTTCTaGGCTAAGGGCTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHGGSTF*AKGFLN
Trigger: GTTCAGGAAGCCCTTAGCCAAGAAAGTACTCCCACC...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR TCA 72 bp ATTCCATCTCACTGCTTGTTGTTTAAACTTCCAATGTaGATGACGCTTGCAAGGGCTGAGAGTAACATACAG +
Preference number: 3 (lower is better)
Translates to: IPSHCLLFKLPM*MTLARAESNIQ
Trigger: CTGTATGTTACTCTCAGCCCTTGCAAGCGTCATTCACATTGGAAGTTTAAACAACAAGCAGTGAGATGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CCA 72 bp CCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTaGATCAAGGAACTCCACATAAAACCAAAGACATTG +
Preference number: 3 (lower is better)
Translates to: PFLSPGTKLKSK*IKELHIKPKTL
Trigger: CAATGTCTTTGGTTTTATGTGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR TCA 72 bp AAGACCCAGAAATTAACCCACACACTTATGATCACTTaGTTTTTGACAAAGGAGCTAAAACCATCCTTTGGA +
Preference number: 3 (lower is better)
Translates to: KTQKLTHTLMIT*FLTKELKPSFG
Trigger: TCCAAAGGATGGTTTTAGCTCCTTTGTCAAAAATCAAGTGATCATAAGTGTGTGGGTTAATTTCTGGGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CCA 72 bp AAAGACAGCATTTTCAACAAATGGTGTTGGCTCAACTaGTGGTTATCATGTAGAAGAATGCTAATTGATCCA +
Preference number: 3 (lower is better)
Translates to: KDSIFNKWCWLN*WLSCRRMLIDP
Trigger: TGGATCAATTAGCATTCTTCTACATGATAACCACCAGTTGAGCCAACACCATTTGTTGAAAATGCTGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CAA 90 bp TTGCCAGCTTTCAAAAGCCATTTCATGGGTGAATACCTTAAAATAGCATTTCCTGTCTCAGTGAAATTGTaGAGGATGATTCTTAACAAC +
Preference number: 3 (lower is better)
Translates to: LPAFKSHFMGEYLKIAFPVSVKL*RMILNN
Trigger: GTTGTTAAGAATCATCCTCAACAATTTCACTGAGAC...AGGAAATGCTATTTTAAGGTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR-3UTR CAA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACCATTTTACCAGTATTTaGGTGGGAGTACTTTCTTGG +
Preference number: 3 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHHFTSI*VGVLSW
Trigger: CCAAGAAAGTACTCCCACCAAAATACTGGTAAAATG...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR TCA 72 bp TATACAACGGGAAAGAATAAAGAATTGGATGTTCAGTaGTATCGTACCAGGCGATATGATCTGCATTCATTA +
Preference number: 3 (lower is better)
Translates to: YTTGKNKELDVQ*YRTRRYDLHSL
Trigger: TAATGAATGCAGATCATATCGCCTGGTACGATATCACTGAACATCCAATTCTTTATTCTTTCCCGTTGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp CCACTTCCTGGCCCTGGCAATCCCCTATACTGGGGCATAGAACCTTCACAAGACTTGAAAGCAATGAGCTaGTGTGAGCAGAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PLPGPGNPLYWGIEPSQDLKAMS*CEQKSF
Trigger: GAAAGATTTCTGCTCACAGCAGCTCATTGCTTTCAA...GTCTTGTGAAGGTTCTATGCCCCAGTATAGGGGATTGCCAGGGCCAGGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp CCACTTCCTGGCCCTGGCAATCCCCTATACTGGGGCATAGAACCTTCACAAGACACCAATGTGATGACCTaGGAGTTGATATATTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLPGPGNPLYWGIEPSQDTNVMT*ELIYCL
Trigger: CAAACAATATATCAACTCTCAGGTCATCACATTGGT...GTCTTGTGAAGGTTCTATGCCCCAGTATAGGGGATTGCCAGGGCCAGGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGAATTATCCCAAGGGCTaGCAGCACTCCAAGCACACA +
Preference number: 4 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEENYPKG*QHSKHT
Trigger: TGTGTGCTTGGAGTGCTGGCAGCCCTTGGGATAATT...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGGGTTGCAGACATTCTTaGTCTTCTCCCACAGCGGTT +
Preference number: 4 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEEGCRHS*SSPTAV
Trigger: AACCGCTGTGGGAGAAGACCAAGAATGTCTGCAACC...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGTGTAGTCAGGGATTCTaGGTTGTTCTCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEECSQGF*VVLQHL
Trigger: CAGATGCTGGAGAACAACCCAGAATCCCTGACTACA...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp TACTGTCCCCTCATACAGCCTGGTAAATCACTACAGTCAACACCATGTTTCCACTTGTGTCCACTATCCTaGCTCCATAAGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: YCPLIQPGKSLQSTPCFHLCPLS*LHKLLL
Trigger: CAGAAGAAGCTTATGGAGGCAGGATAGTGGACACAA...GTGGAAACATGGTGTTGACTGTAGTGATTTACCAGGCTGTATGAGGGGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp AAGAGAATACAGCTCCCTCTTCTGACCCCTAGGCATTTATGTGGTACAGGAAAACACCAGCCATATATGTaGTGTCACGCTGTTGTTATC +
Preference number: 4 (lower is better)
Translates to: KRIQLPLLTPRHLCGTGKHQPYM*CHAVVI
Trigger: GATAACAACAGCGTGACAGCACATATATGGCTGGTG...TTTTCCTGTACCACATAAATGCCTAGGGGTCAGAAGAGGGAGCTGTATTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp TACTGTCCCCTCATACAGCCTGGTAAATCACTACAGTCAACACCATGTTTCCACACCATTGTAAGAAAATaGTCCCCATCCTGTAACAAC +
Preference number: 4 (lower is better)
Translates to: YCPLIQPGKSLQSTPCFHTIVRK*SPSCNN
Trigger: GTTGTTACAGGATGGGGATCATTTTCTTACAATGGT...GTGGAAACATGGTGTTGACTGTAGTGATTTACCAGGCTGTATGAGGGGACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACGAGACTCGCTTGCCATaGCCACTCTCCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHETRLP*PLSFVS
Trigger: GCTCACAAAGGAGAGTGGCCATGGCAAGCGAGTCTC...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp TCCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTGGATCAAGGAACTCCATCTCAAGGATTTTACTaGGGTAGTTACTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SILISWYKAQVQVDQGTPSQGFY*GSYFLV
Trigger: CACTAGAAAGTAACTACCTCAGTAAAATCCTTGAGA...TGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp TCCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTGGATCAAGGAACTCCATCCATAAGCTTCTTCTaGATTGCAAGTATTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SILISWYKAQVQVDQGTPSISFF*IASICV
Trigger: GACACAAATACTTGCAATTCAGAAGAAGCTTATGGA...TGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGTCTCGAGAATTGGGATaGACTAGTGGTCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQSRELG*TSGPPE
Trigger: CTCTGGAGGACCACTAGTTCATCCCAATTCTCGAGA...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp TCCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTGGATCAAGGAACTCCAGGAAGACAAACCCGATaGACATCATTATTGAATGAA +
Preference number: 4 (lower is better)
Translates to: SILISWYKAQVQVDQGTPGRQTR*TSLLNE
Trigger: TTCATTCAATAATGATGTGCATCGGGTTTGTCTTCC...TGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp TTGCCAGCTTTCAAAAGCCATTTCATGGGTGAATACCTTAAAATAGCATTTCCTGACTCCTTCACCTGGTaGAAAAATCTGGGTGGATTC +
Preference number: 4 (lower is better)
Translates to: LPAFKSHFMGEYLKIAFPDSFTW*KNLGGF
Trigger: GAATCCACCCAGATTTTTCCACCAGGTGAAGGAGTC...AGGAAATGCTATTTTAAGGTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp TTGCCAGCTTTCAAAAGCCATTTCATGGGTGAATACCTTAAAATAGCATTTCCTATGCTGCATGTAGGCTaGAGTTACTCTAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LPAFKSHFMGEYLKIAFPMLHVG*SYSSAK
Trigger: TTTGGCACTAGAGTAACTCCAGCCTACATGCAGCAT...AGGAAATGCTATTTTAAGGTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGGTGGAAAAATCTGGGTaGATTCCGGAAGACAAACCC +
Preference number: 4 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQVEKSG*IPEDKP
Trigger: GGGTTTGTCTTCCGGAATCCACCCAGATTTTTCCAC...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGAACGACTCCTTCACCTaGTGGAAAAATCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQNDSFT*WKNLGG
Trigger: TCCACCCAGATTTTTCCACCAGGTGAAGGAGTCGTT...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 72 bp AGCTCTTGGTTTGACCATTACCCTGTCTCAGTGAAATaGTTGAGGATGATTCTTAACAACAGCTTATGCATC +
Preference number: 4 (lower is better)
Translates to: SSWFDHYPVSVK*LRMILNNSLCI
Trigger: GATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGAGACAGGGTAATGGTCAAACCAAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 72 bp TGGTGGCTGTATAGTCTAAACTGTGCATTATCTACTTaGCCAGCTTTCAAAAGCCATTTCATGGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: WWLYSLNCALST*PAFKSHFMGEY
Trigger: GTATTCACCCATGAAATGGCTTTTGAAAGCTGGCAAAGTAGATAATGCACAGTTTAGACTATACAGCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 72 bp TCTTGGTTTGACCATTACCCTGTCTCAGTGAAATTGTaGAGGATGATTCTTAACAACAGCTTATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: SWFDHYPVSVKL*RMILNNSLCIY
Trigger: GTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGAGACAGGGTAATGGTCAAACCAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
3UTR CAA 72 bp GAAGACCCAGAAATTAACCCACACACTTATGATCACTaGATTTTTGACAAAGGAGCTAAAACCATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: EDPEINPHTYDH*IFDKGAKTILW
Trigger: CCAAAGGATGGTTTTAGCTCCTTTGTCAAAAATCAAGTGATCATAAGTGTGTGGGTTAATTTCTGGGTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CCA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACAAATATCTCGAGAATTaGGATGAACTAGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHKYLEN*DELVVL
Trigger: GAGGACCACTAGTTCATCCCAATTCTCGAGATATTT...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR TCA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGTCTACTGCCAGAAAGTaGACTAAGAGTCCAATAATT +
Preference number: 4 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQSTARK*TKSPII
Trigger: AATTATTGGACTCTTAGTTCACTTTCTGGCAGTAGA...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR GCA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGGCATCTGACGTAAGATaGTTTCAATTCTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQASDVR*FQFSFL
Trigger: TAAGAAGGAGAATTGAAAGCATCTTACGTCAGATGC...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CCA 90 bp TGCCCCACAGTAGTGTTTACCATTCACTCTGAGACTCGCTTGCCATaGCCACTCTCCTTTGTGAGCAGTGGAACCTCCCGTGATTCTGTC +
Preference number: 5 (lower is better)
Translates to: CPTVVFTIHSETRLP*PLSFVSSGTSRDSV
Trigger: GACAGAATCACGGGAGGTTCCACTGCTCACAAAGGAGAGTGGCCATGGCAAGCGAGTCTCAGAGTGAATGGTAAACACTACTGTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 90 bp TTTCGCCAATCAGAGATGCCCCACAGTAGTGTTTACCATTCACTCTaGGACTCGCTTGCCATGGCCACTCTCCTTTGTGAGCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: FRQSEMPHSSVYHSL*DSLAMATLLCEQWN
Trigger: GTTCCACTGCTCACAAAGGAGAGTGGCCATGGCAAGCGAGTCTCAGAGTGAATGGTAAACACTACTGTGGGGCATCTCTGATTGGCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CAA 90 bp CTAAAACTCATCAGGAAGATGAGTAATCACATTAGGAAGCTCCTCGGGGAGGAGAGCCAGCACAGAGCATaGTGTCCACTATCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LKLIRKMSNHIRKLLGEESQHRA*CPLSCL
Trigger: GAGGCAGGATAGTGGACACAATGCTCTGTGCTGGCT...CTCCTCCCCGAGGAGCTTCCTAATGTGATTACTCATCTTCCTGATGAGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 90 bp CTCTCCTTTGTGAGCAGTGGAACCTCCCGTGATTCTGTCGTAGGTTaGAGACATTCTTGGTCTTCTCCCACAGCGGTTGTTGATAATCTT +
Preference number: 5 (lower is better)
Translates to: LSFVSSGTSRDSVVG*RHSWSSPTAVVDNL
Trigger: AAGATTATCAACAACCGCTGTGGGAGAAGACCAAGAATGTCTGCAACCTACGACAGAATCACGGGAGGTTCCACTGCTCACAAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CCA 90 bp AGCAGTGGAACCTCCCGTGATTCTGTCGTAGGTTGCAGACATTCTTaGTCTTCTCCCACAGCGGTTGTTGATAATCTTCTCAGCATCAAC +
Preference number: 5 (lower is better)
Translates to: SSGTSRDSVVGCRHS*SSPTAVVDNLLSIN
Trigger: GTTGATGCTGAGAAGATTATCAACAACCGCTGTGGGAGAAGACCAAGAATGTCTGCAACCTACGACAGAATCACGGGAGGTTCCACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CAA 90 bp AAGAGAATACAGCTCCCTCTTCTGACCCCTAGGCATTTATGTGGTACAGGAAAATGTGCTGTCACGCTGTaGTTATCAGGAACCAATGTG +
Preference number: 5 (lower is better)
Translates to: KRIQLPLLTPRHLCGTGKCAVTL*LSGTNV
Trigger: CACATTGGTTCCTGATAACAACAGCGTGACAGCACA...TTTTCCTGTACCACATAAATGCCTAGGGGTCAGAAGAGGGAGCTGTATTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CAA 90 bp TCAGTGAAATTGTTGAGGATGATTCTTAACAACAGCTTATGCATCTACTTACAGCACTCTGAGACTCGCTaGCCATGGCCACTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLRMILNNSLCIYLQHSETR*PWPLSF
Trigger: AAAGGAGAGTGGCCATGGCAAGCGAGTCTCAGAGTG...CTGTAAGTAGATGCATAAGCTGTTGTTAAGAATCATCCTCAACAATTTCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CAA 90 bp TCCATTCTTATCTCCTGGTACAAAGCTCAAGTCCAAGTGGATCAAGGAACTCCATGGATTATTTGTCCCTaGAAAGCAATGAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SILISWYKAQVQVDQGTPWIICP*KAMSCC
Trigger: ACAGCAGCTCATTGCTTTCAAGGGACAAATAATCCA...TGGAGTTCCTTGATCCACTTGGACTTGAGCTTTGTACCAGGAGATAAGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS-3UTR CAA 90 bp GTTTATTACTTTCCTGGTGTAATAAACAAGGACAAATTGGAGATTCCATCTCACAGGTTGCAGACATTCTaGGTCTTCTCCCACAGCGGT +
Preference number: 5 (lower is better)
Translates to: VYYFPGVINKDKLEIPSHRLQTF*VFSHSG
Trigger: ACCGCTGTGGGAGAAGACCAAGAATGTCTGCAACCT...GTGAGATGGAATCTCCAATTTGTCCTTGTTTATTACACCAGGAAAGTAATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 90 bp TCACCTGGTGGAAAAATCTGGGTGGATTCCGGAAGACAAACCCGATaGACATCATTATTGAATGAAACTTTTTCAGTGAGCTTTATAACT +
Preference number: 5 (lower is better)
Translates to: SPGGKIWVDSGRQTR*TSLLNETFSVSFIT
Trigger: AGTTATAAAGCTCACTGAAAAAGTTTCATTCAATAATGATGTGCATCGGGTTTGTCTTCCGGAATCCACCCAGATTTTTCCACCAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 72 bp GTGAGCAGTGGAACCTCCCGTGATTCTGTCGTAGGTTaGAGACATTCTTGGTCTTCTCCCACAGCGGTTGTT +
Preference number: 6 (lower is better)
Translates to: VSSGTSRDSVVG*RHSWSSPTAVV
Trigger: AACAACCGCTGTGGGAGAAGACCAAGAATGTCTGCAACCTACGACAGAATCACGGGAGGTTCCACTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CCA 72 bp GTAGTGTTTACCATTCACTCTGAGACTCGCTTGCCATaGCCACTCTCCTTTGTGAGCAGTGGAACCTCCCGT +
Preference number: 6 (lower is better)
Translates to: VVFTIHSETRLP*PLSFVSSGTSR
Trigger: ACGGGAGGTTCCACTGCTCACAAAGGAGAGTGGCCATGGCAAGCGAGTCTCAGAGTGAATGGTAAACACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 72 bp ATGGCCACTCTCCTTTGTGAGCAGTGGAACCTCCCGTaGTTCTGTCGTAGGTTGCAGACATTCTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: MATLLCEQWNLP*FCRRLQTFLVF
Trigger: GAAGACCAAGAATGTCTGCAACCTACGACAGAATCACGGGAGGTTCCACTGCTCACAAAGGAGAGTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 72 bp TCAGAGATGCCCCACAGTAGTGTTTACCATTCACTCTaGGACTCGCTTGCCATGGCCACTCTCCTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: SEMPHSSVYHSL*DSLAMATLLCE
Trigger: CTCACAAAGGAGAGTGGCCATGGCAAGCGAGTCTCAGAGTGAATGGTAAACACTACTGTGGGGCATCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CAA 72 bp CATCGATACTGCCTTCCAAGTAGCCAGCACAGAGCATaGTGTCCACTATCCTGCCTCCATAAGCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: HRYCLPSSQHRA*CPLSCLHKLLL
Trigger: CAGAAGAAGCTTATGGAGGCAGGATAGTGGACACAATGCTCTGTGCTGGCTACTTGGAAGGCAGTATCGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 72 bp AGCTGCTGTGAGCAGAAATCTTTCGCCAATCAGAGATaGCCCACAGTAGTGTTTACCATTCACTCTGAGACT +
Preference number: 6 (lower is better)
Translates to: SCCEQKSFANQR*PTVVFTIHSET
Trigger: AGTCTCAGAGTGAATGGTAAACACTACTGTGGGGCATCTCTGATTGGCGAAAGATTTCTGCTCACAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 72 bp TTGGATTATTTGTCCCTTGAAAGCAATGAGCTGCTGTaGGCAGAAATCTTTCGCCAATCAGAGATGCCCCAC +
Preference number: 6 (lower is better)
Translates to: LDYLSLESNELL*AEIFRQSEMPH
Trigger: GTGGGGCATCTCTGATTGGCGAAAGATTTCTGCTCACAGCAGCTCATTGCTTTCAAGGGACAAATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 72 bp CCAAGTAGCCAGCACAGAGCATTGTGTCCACTATCCTaGCTCCATAAGCTTCTTCTGAATTGCAAGTATTTG +
Preference number: 6 (lower is better)
Translates to: PSSQHRALCPLS*LHKLLLNCKYL
Trigger: CAAATACTTGCAATTCAGAAGAAGCTTATGGAGGCAGGATAGTGGACACAATGCTCTGTGCTGGCTACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS GCA 72 bp GGAAAAATCTGGGTGGATTCCGGAAGACAAACCCGATaGACATCATTATTGAATGAAACTTTTTCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: GKIWVDSGRQTR*TSLLNETFSVS
Trigger: GCTCACTGAAAAAGTTTCATTCAATAATGATGTGCATCGGGTTTGTCTTCCGGAATCCACCCAGATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CAA 72 bp CGTAAGATGCTTTCAATTCTCCTTCTTAGGTTTTCCTaGTTAGACCAGGGATCCTTAAACACCAGCCATATA +
Preference number: 6 (lower is better)
Translates to: RKMLSILLLRFS*LDQGSLNTSHI
Trigger: TATATGGCTGGTGTTTAAGGATCCCTGGTCTAACAAGGAAAACCTAAGAAGGAGAATTGAAAGCATCTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 72 bp CATTGTGTCCACTATCCTGCCTCCATAAGCTTCTTCTaGATTGCAAGTATTTGTGTCAATGATTTTAATGGA +
Preference number: 6 (lower is better)
Translates to: HCVHYPASISFF*IASICVNDFNG
Trigger: TCCATTAAAATCATTGACACAAATACTTGCAATTCAGAAGAAGCTTATGGAGGCAGGATAGTGGACACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS TCA 72 bp GAAAGGCTTCAACCATTTTATTCTCAAGGATTTTACTaGGGTAGTTACTTTCTAGTGATGTCTCCCTTTCAT +
Preference number: 6 (lower is better)
Translates to: ERLQPFYSQGFY*GSYFLVMSPFH
Trigger: ATGAAAGGGAGACATCACTAGAAAGTAACTACCTCAGTAAAATCCTTGAGAATAAAATGGTTGAAGCCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7
CDS CAA 72 bp TCTGTCATATGGAATATCCAGCACTTTAAAACCACCTaGATAGTAGTAGATCTTGTTTTCTACTGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: SVIWNIQHFKTT*IVVDLVFYCQK
Trigger: TTTCTGGCAGTAGAAAACAAGATCTACTACTATCAAGGTGGTTTTAAAGTGCTGGATATTCCATATGACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038448.7