Pregenerated sensors for TMPRSS11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072845Ensembl transcript IDs: ENSMUST00000101073.3
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTCCAGCCATTTAATCTCATTTCATTGTGCCAATGCCACCAAATaGATGTCTGAATTCTTACATGCATATAACCGACACGCTACGGTT | + |
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Preference number: 1 (lower is better) Translates to: RSSHLISFHCANATK*MSEFLHAYNRHATV Trigger: AACCGTAGCGTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACAATGAAATGAGATTAAATGGCTGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR TCA 90 bp | AAAGCCTTCTTTAGGTCTATTGTGGGCAACAATGTTTCACTTTCCTaGTGCCTTCATGAGTCTGTTTGTTTTTACTTCCTGGACATAAAT | + |
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Preference number: 1 (lower is better) Translates to: KAFFRSIVGNNVSLS*CLHESVCFYFLDIN Trigger: ATTTATGTCCAGGAAGTAAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAAAGAAGGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR GCA 90 bp | TTACTGCATTTTTCAATGATAAATCAGCCTACACCTTCACAAATATaGGATTCTGAAATAAATCATGTGTTTCACATTGCTAGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LLHFSMINQPTPSQI*DSEINHVFHIARSS Trigger: GCTGGACCTAGCAATGTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATTTATCATTGAAAAATGCAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR-3UTR CCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACGCCAATGCCACCAAATaGATGTCTGAATTCTTACAT | + |
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Preference number: 2 (lower is better) Translates to: NQPTPSQICDSEINHVFHANATK*MSEFLH Trigger: ATGTAAGAATTCAGACATCCATTTGGTGGCATTGGC...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR CCA 72 bp | CATACAACCATGAATGAAATGCTGCAGCAGACAGTTTaGAGCGCATTATTTACAACTCTAAGACCACTTTCT | + |
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Preference number: 3 (lower is better) Translates to: HTTMNEMLQQTV*SALFTTLRPLS Trigger: AGAAAGTGGTCTTAGAGTTGTAAATAATGCGCTCCAAACTGTCTGCTGCAGCATTTCATTCATGGTTGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR TCA 72 bp | TTTAGGTCTATTGTGGGCAACAATGTTTCACTTTCCTaGTGCCTTCATGAGTCTGTTTGTTTTTACTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: FRSIVGNNVSLS*CLHESVCFYFL Trigger: CAGGAAGTAAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR CCA 72 bp | CATTTAATCTCATTTCATTGTGCCAATGCCACCAAATaGATGTCTGAATTCTTACATGCATATAACCGACAC | + |
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Preference number: 3 (lower is better) Translates to: HLISFHCANATK*MSEFLHAYNRH Trigger: GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACAATGAAATGAGATTAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR CCA 72 bp | AGAAATTATCCAATAAAGCCTTCTTTAGGTCTATTGTaGGCAACAATGTTTCACTTTCCTGATGCCTTCATG | + |
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Preference number: 3 (lower is better) Translates to: RNYPIKPSLGLL*ATMFHFPDAFM Trigger: CATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAAAGAAGGCTTTATTGGATAATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR TCA 72 bp | GATTTAAAACATTATTTGTTCCCATACAACCATGAATaGAATGCTGCAGCAGACAGTTTGGAGCGCATTATT | + |
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Preference number: 3 (lower is better) Translates to: DLKHYLFPYNHE*NAAADSLERII Trigger: AATAATGCGCTCCAAACTGTCTGCTGCAGCATTTCATTCATGGTTGTATGGGAACAAATAATGTTTTAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR TCA 72 bp | ATTAGATTTAAAACATTATTTGTTCCCATACAACCATaGATGAAATGCTGCAGCAGACAGTTTGGAGCGCAT | + |
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Preference number: 3 (lower is better) Translates to: IRFKTLFVPIQP*MKCCSRQFGAH Trigger: ATGCGCTCCAAACTGTCTGCTGCAGCATTTCATTCATGGTTGTATGGGAACAAATAATGTTTTAAATCTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR GCA 72 bp | AGTACCATTAATCAGTATTTCTCTTATGTATCTCTATaGCATCGGGATGGTGATATGAGTGTTGTATACATG | + |
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Preference number: 3 (lower is better) Translates to: STINQYFSYVSL*HRDGDMSVVYM Trigger: CATGTATACAACACTCATATCACCATCCCGATGGCATAGAGATACATAAGAGAAATACTGATTAATGGTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | AGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGCTCAGTCATCATCCCAGGCTTGTTCTTTTaGCCACAGTTGTCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SAHSKYLVHLSWNSSVIIPGLFF*PQLSPQ Trigger: CTGGGGAGACAACTGTGGTCAAAAGAACAAGCCTGG...GATGATGACTGAGCTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | AGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGCTCAGTCATCATCGATCTCTGTTGTGGGTaGCATATCCTGCCACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SAHSKYLVHLSWNSSVIIDLCCG*HILPLP Trigger: TGGAAGTGGCAGGATATGGCACCCACAACAGAGATC...GATGATGACTGAGCTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACCTTCATCCGAAAAGGTaGCTCTGGGAGAAAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: CANATKWMSEFLHAYNRHLHPKR*LWEKTA Trigger: TGCAGTTTTCTCCCAGAGTCACCTTTTCGGATGAAG...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACCCCGCCATAGTAAAGTaGTCCGAATCCTGTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: CANATKWMSEFLHAYNRHPAIVK*SESCDV Trigger: TACATCACAGGATTCGGAGCACTTTACTATGGCGGG...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CCA 90 bp | GCGACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACCTGTAGCGGGAGGCTaGAACACCATGACAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: ATKICKCAFKISCTPILEPVAGG*NTMTMS Trigger: AGACATTGTCATGGTGTTCCAGCCTCCCGCTACAGG...TTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | TACAGCAGCCATAAACAAACTTTGCAAGGAAAGAGGGCATGTGAATTTGACAACTGTTACCAATCAACGTaGCCCCACACTGATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: YSSHKQTLQGKRACEFDNCYQST*PHTDGC Trigger: ACATCCATCAGTGTGGGGGCACGTTGATTGGTAACA...GTTGTCAAATTCACATGCCCTCTTTCCTTGCAAAGTTTGTTTATGGCTGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACACTCTGGGAGAAAACTaGACTAGAGCAATGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: CANATKWMSEFLHAYNRHTLGEN*TRAMSW Trigger: CCATGACATTGCTCTAGTGCAGTTTTCTCCCAGAGT...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | AGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGCTCAGTCATCATCATTTGGTGGGAAAGATaGAGAGGGTTCTGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SAHSKYLVHLSWNSSVIIIWWER*RGFWQT Trigger: TGTTTGCCAGAACCCTCTGCATCTTTCCCACCAAAT...GATGATGACTGAGCTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | TTAGGTCTATTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGGTCCTGAGTTGCTATTaGCTTGAATATCGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: LGLLWATMFHFPDAFMSLVLSCY*LEYRTR Trigger: TCGTGTTCGATATTCAAGTCAATAGCAACTCAGGAC...CAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACTGTGATGTAGACAGTTaGATTTGGTGGGAAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: CANATKWMSEFLHAYNRHCDVDS*IWWERC Trigger: GCATCTTTCCCACCAAATTCAACTGTCTACATCACA...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | TACAGCAGCCATAAACAAACTTTGCAAGGAAAGAGGGCATGTGAATTTGACAACTCTAAAACAGTGTGCTaGAGTGACGACCCACATGTT | + |
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Preference number: 4 (lower is better) Translates to: YSSHKQTLQGKRACEFDNSKTVC*SDDPHV Trigger: AACATGTGGGTCGTCACTGCAGCACACTGTTTTAGA...GTTGTCAAATTCACATGCCCTCTTTCCTTGCAAAGTTTGTTTATGGCTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTTTGTTTTTGTCTCTTATAACCAATaGTCCCCCAGAATCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: LWATMFHFPDAFMSLFVFVSYNQ*SPRITP Trigger: AGGGGTGATTCTGGGGGACCATTGGTTATAAGAGAC...AAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | TTAGGTCTATTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTGTAAGTCCTTCAGTTaGTTTGAGCTCTTTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGLLWATMFHFPDAFMSLCKSFS*FELFCP Trigger: AGGACAAAAGAGCTCAAATCAACTGAAGGACTTACA...CAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGGCGTTCCTTGTCTTCTaGTCTAAGATGCTATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TKICKCAFKISCTPILEQAFLVF*SKMLWC Trigger: GCACCATAGCATCTTAGATCAGAAGACAAGGAACGC...CTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACCACCATGACAATGTCTaGTTTTGTATCATCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CANATKWMSEFLHAYNRHHHDNV*FCIILF Trigger: GAAGAGGATGATACAAAAGCAGACATTGTCATGGTG...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGAATGTCATGGTCTCTTaGTGGGGGACGATACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TKICKCAFKISCTPILEQNVMVS*WGTIPF Trigger: GAAAGGTATCGTCCCCCAGCAAGAGACCATGACATT...CTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACACTAGAGCAATGTCATaGTCTCTTGCTGGGGGACGA | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHTRAMS*SLAGGR Trigger: TCGTCCCCCAGCAAGAGACCATGACATTGCTCTAGT...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGTTTAACTTGAACCAGTaGGACATCAGCTGGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TKICKCAFKISCTPILEQFNLNQ*DISWQS Trigger: GCTTTGCCAGCTGATGTCTCACTGGTTCAAGTTAAA...CTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACGGTTCTAAAACAGTGTaGTGCAGTGACGACCCACAT | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHGSKTV*CSDDPH Trigger: ATGTGGGTCGTCACTGCAGCACACTGTTTTAGAACC...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACTTCAGATCTCTGTTGTaGGTGCCATATCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHFRSLL*VPYPAT Trigger: AGTGGCAGGATATGGCACCCACAACAGAGATCTGAA...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACGAGGCTGGAACACCATaGCAATGTCTGCTTTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHEAGTP*QCLLLY Trigger: ATACAAAAGCAGACATTGTCATGGTGTTCCAGCCTC...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | GCGACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAATCTTCTGATCTAAGATaGTATGGTGCGTCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ATKICKCAFKISCTPILESSDLR*YGASFS Trigger: GGAAAAAGACGCACCATAGCATCTTAGATCAGAAGA...TTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGTCGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACCACACTGATGGATGTTaGTTCGCTGAAGGGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHHTDGC*FAEGKL Trigger: AAGTTTCCCTTCAGCGAAGCAACATCCATCAGTGTG...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| 3UTR CAA 72 bp | GCAAGAAATTATCCAATAAAGCCTTCTTTAGGTCTATaGTGGGCAACAATGTTTCACTTTCCTGATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ARNYPIKPSLGL*WATMFHFPDAF Trigger: GAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAAAGAAGGCTTTATTGGATAATTTCTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACAGCTCACAATTCCAATaGGATACCAGGTATCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: NQPTPSQICDSEINHVFHSSQFQ*DTRYLC Trigger: ACAAAGATACCTGGTATCTCATTGGAATTGTGAGCT...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR GCA 90 bp | ACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGGGACGATACCTTTCATaGATAATAATTCTTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: TKICKCAFKISCTPILEQGRYLS*IIILLT Trigger: CGTCAGAAGAATTATTATGCATGAAAGGTATCGTCC...CTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 90 bp | CAGAGGGTTCTGGCAAACAAATTCGGCGCACTTCATCCGAAAAGGTaGCTCTGGGAGAAAACTGCACTAGAGCAATGTCATGGTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QRVLANKFGALHPKR*LWEKTALEQCHGLL Trigger: CAAGAGACCATGACATTGCTCTAGTGCAGTTTTCTCCCAGAGTCACCTTTTCGGATGAAGTGCGCCGAATTTGTTTGCCAGAACCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 90 bp | GCTCATTTTGGGATTCCCCGCCATAGTAAAGTGCTCCGAATCCTGTaGTGTAGACAGTTGAATTTGGTGGGAAAGATGCAGAGGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: AHFGIPRHSKVLRIL*CRQLNLVGKMQRVL Trigger: CAGAACCCTCTGCATCTTTCCCACCAAATTCAACTGTCTACATCACAGGATTCGGAGCACTTTACTATGGCGGGGAATCCCAAAATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 90 bp | TTCCCCGCCATAGTAAAGTGCTCCGAATCCTGTGATGTAGACAGTTaGATTTGGTGGGAAAGATGCAGAGGGTTCTGGCAAACAAATTCG | + |
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Preference number: 5 (lower is better) Translates to: FPAIVKCSESCDVDS*IWWERCRGFWQTNS Trigger: CGAATTTGTTTGCCAGAACCCTCTGCATCTTTCCCACCAAATTCAACTGTCTACATCACAGGATTCGGAGCACTTTACTATGGCGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 90 bp | TTTCATTGCCATACACGTGTCGCTTCTTGCAGATGTCATTGCTTATaGTTTGTACTCTGGCTTCACGGAGCTCATTTTGGGATTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: FHCHTRVASCRCHCL*FVLWLHGAHFGIPR Trigger: GCGGGGAATCCCAAAATGAGCTCCGTGAAGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACTCGCTGAAGGGAAACTaGCCACGGCCAGGCACCCTT | + |
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Preference number: 5 (lower is better) Translates to: NQPTPSQICDSEINHVFHSLKGN*PRPGTL Trigger: AAGGGTGCCTGGCCGTGGCAAGTTTCCCTTCAGCGA...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | AGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGCTCAGTCATCATCAAGCTCTTGCGTTCCTaGTCTTCTGATCTAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: SAHSKYLVHLSWNSSVIIKLLRS*SSDLRC Trigger: GCATCTTAGATCAGAAGACAAGGAACGCAAGAGCTT...GATGATGACTGAGCTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | TTAGGTCTATTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTACACGTGTCGCTTCTaGCAGATGTCATTGCTTATG | + |
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Preference number: 5 (lower is better) Translates to: LGLLWATMFHFPDAFMSLYTCRF*QMSLLM Trigger: CATAAGCAATGACATCTGCAAGAAGCGACACGTGTA...CAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAATAGACCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 90 bp | AGGATTTATTGTTGTTCCAAAACTAAGAGTCCATTGGCGAGGGTTTaGATTGGTTCTAAAACAGTGTGCTGCAGTGACGACCCACATGTT | + |
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Preference number: 5 (lower is better) Translates to: RIYCCSKTKSPLARV*IGSKTVCCSDDPHV Trigger: AACATGTGGGTCGTCACTGCAGCACACTGTTTTAGAACCAATTCAAACCCTCGCCAATGGACTCTTAGTTTTGGAACAACAATAAATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTTTGTTTTTTCGGTAATAAGTCACTaGTGTGTACACCCCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LWATMFHFPDAFMSLFVFSVISH*CVHPRL Trigger: AAGCCTGGGGTGTACACACAAGTGACTTATTACCGA...AAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS GCA 90 bp | ACTAGAGCAATGTCATGGTCTCTTGCTGGGGGACGATACCTTTCATaGATAATAATTCTTCTGACGTCTCTTTTCATTAAGGGAGGATTT | + |
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Preference number: 5 (lower is better) Translates to: TRAMSWSLAGGRYLS*IIILLTSLFIKGGF Trigger: AAATCCTCCCTTAATGAAAAGAGACGTCAGAAGAATTATTATGCATGAAAGGTATCGTCCCCCAGCAAGAGACCATGACATTGCTCTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTTTGTTTTTGTCATTGCTTATGATTaGTACTCTGGCTTCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: LWATMFHFPDAFMSLFVFVIAYD*YSGFTE Trigger: CTCCGTGAAGCCAGAGTACAAATCATAAGCAATGAC...AAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAATATGTAAGTGCGCATTCAAAATATCTTGTACACCTATCCTGGAACAGAAGGGTAACCATCCATaGCTTCAGATCTCTGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: TKICKCAFKISCTPILEQKGNHP*LQISVV Trigger: CACAACAGAGATCTGAAGCAATGGATGGTTACCCTT...CTGTTCCAGGATAGGTGTACAAGATATTTTGAATGCGCACTTACATATTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | TTGTGGGCAACAATGTTTCACTTTCCTGATGCCTTCATGAGTCTGTTTGTTTTTAGTCCTTCAGTTGATTaGAGCTCTTTTGTCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LWATMFHFPDAFMSLFVFSPSVD*SSFVLS Trigger: ACTCAGGACAAAAGAGCTCAAATCAACTGAAGGACT...AAAAACAAACAGACTCATGAAGGCATCAGGAAAGTGAAACATTGTTGCCCACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | TGTGCCAATGCCACCAAATGGATGTCTGAATTCTTACATGCATATAACCGACACTACCAGGTATCTTTGTaGTCTCTTATAACCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: CANATKWMSEFLHAYNRHYQVSL*SLITNG Trigger: ACCATTGGTTATAAGAGACAACAAAGATACCTGGTA...GTGTCGGTTATATGCATGTAAGAATTCAGACATCCATTTGGTGGCATTGGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS-3UTR CAA 90 bp | AATCAGCCTACACCTTCACAAATATGCGATTCTGAAATAAATCATGTGTTTCACTTCTTGCAGATGTCATaGCTTATGATTTGTACTCTG | + |
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Preference number: 5 (lower is better) Translates to: NQPTPSQICDSEINHVFHFLQMS*LMICTL Trigger: CAGAGTACAAATCATAAGCAATGACATCTGCAAGAA...GTGAAACACATGATTTATTTCAGAATCGCATATTTGTGAAGGTGTAGGCTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 90 bp | CAACGTGCCCCCACACTGATGGATGTTGCTTCGCTGAAGGGAAACTaGCCACGGCCAGGCACCCTTAGCTGCAGGGTTTCCAGACACTAT | + |
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Preference number: 6 (lower is better) Translates to: QRAPTLMDVASLKGN*PRPGTLSCRVSRHY Trigger: ATAGTGTCTGGAAACCCTGCAGCTAAGGGTGCCTGGCCGTGGCAAGTTTCCCTTCAGCGAAGCAACATCCATCAGTGTGGGGGCACGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS GCA 72 bp | TGTTACCAATCAACGTGCCCCCACACTGATGGATGTTaGTTCGCTGAAGGGAAACTTGCCACGGCCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: CYQSTCPHTDGC*FAEGKLATARH Trigger: GTGCCTGGCCGTGGCAAGTTTCCCTTCAGCGAAGCAACATCCATCAGTGTGGGGGCACGTTGATTGGTAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS GCA 72 bp | ATCAGGGAGAGAGCAGAGAGAAGGGTAACCATCCATTaGTTCAGATCTCTGTTGTGGGTGCCATATCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: IRERAERRVTIH*FRSLLWVPYPA Trigger: GGCAGGATATGGCACCCACAACAGAGATCTGAAGCAATGGATGGTTACCCTTCTCTCTGCTCTCTCCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CCA 72 bp | GAATATCGAACACGAGGAAGAGAGCCAGAAGTCCAATaGTCACTACCACCATCATCAGGGAGAGAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: EYRTRGREPEVQ*SLPPSSGREQR Trigger: TCTCTGCTCTCTCCCTGATGATGGTGGTAGTGACCATTGGACTTCTGGCTCTCTTCCTCGTGTTCGATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CCA 72 bp | TTTTTCCCTACGGTTCTTCGCCCTGTAGCGGGAGGCTaGAACACCATGACAATGTCTGCTTTTGTATCATCC | + |
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Preference number: 6 (lower is better) Translates to: FFPTVLRPVAGG*NTMTMSAFVSS Trigger: GGATGATACAAAAGCAGACATTGTCATGGTGTTCCAGCCTCCCGCTACAGGGCGAAGAACCGTAGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | GGGATTCCCCGCCATAGTAAAGTGCTCCGAATCCTGTaGTGTAGACAGTTGAATTTGGTGGGAAAGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: GIPRHSKVLRIL*CRQLNLVGKMQ Trigger: CTGCATCTTTCCCACCAAATTCAACTGTCTACATCACAGGATTCGGAGCACTTTACTATGGCGGGGAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS GCA 72 bp | GCAAAGCTCTTGCGTTCCTTGTCTTCTGATCTAAGATaGTATGGTGCGTCTTTTTCCCTACGGTTCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: AKLLRSLSSDLR*YGASFSLRFFA Trigger: GGCGAAGAACCGTAGGGAAAAAGACGCACCATAGCATCTTAGATCAGAAGACAAGGAACGCAAGAGCTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | GCACCCTTAGCTGCAGGGTTTCCAGACACTATTCTGTaGGCAATTAATGGGATAGCTCGCTTGCCACAATCT | + |
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Preference number: 6 (lower is better) Translates to: APLAAGFPDTIL*AINGIARLPQS Trigger: AGATTGTGGCAAGCGAGCTATCCCATTAATTGCCAACAGAATAGTGTCTGGAAACCCTGCAGCTAAGGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | GCTTATGATTTGTACTCTGGCTTCACGGAGCTCATTTaGGGATTCCCCGCCATAGTAAAGTGCTCCGAATCC | + |
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Preference number: 6 (lower is better) Translates to: AYDLYSGFTELI*GFPAIVKCSES Trigger: GGATTCGGAGCACTTTACTATGGCGGGGAATCCCAAAATGAGCTCCGTGAAGCCAGAGTACAAATCATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | ACATCAGCTGGCAAAGCTCTTGCGTTCCTTGTCTTCTaGTCTAAGATGCTATGGTGCGTCTTTTTCCCTACG | + |
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Preference number: 6 (lower is better) Translates to: TSAGKALAFLVF*SKMLWCVFFPT Trigger: CGTAGGGAAAAAGACGCACCATAGCATCTTAGATCAGAAGACAAGGAACGCAAGAGCTTTGCCAGCTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | GATAGCTCGCTTGCCACAATCTTTAACTTGAACCAGTaGGACATCAGCTGGCAAAGCTCTTGCGTTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DSSLATIFNLNQ*DISWQSSCVPC Trigger: ACAAGGAACGCAAGAGCTTTGCCAGCTGATGTCTCACTGGTTCAAGTTAAAGATTGTGGCAAGCGAGCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | CTGGCAAACAAATTCGGCGCACTTCATCCGAAAAGGTaGCTCTGGGAGAAAACTGCACTAGAGCAATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LANKFGALHPKR*LWEKTALEQCH Trigger: ATGACATTGCTCTAGTGCAGTTTTCTCCCAGAGTCACCTTTTCGGATGAAGTGCGCCGAATTTGTTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | GTTCCAAAACTAAGAGTCCATTGGCGAGGGTTTGAATaGGTTCTAAAACAGTGTGCTGCAGTGACGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: VPKLRVHWRGFE*VLKQCAAVTTH Trigger: GTGGGTCGTCACTGCAGCACACTGTTTTAGAACCAATTCAAACCCTCGCCAATGGACTCTTAGTTTTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | CATACACGTGTCGCTTCTTGCAGATGTCATTGCTTATaGTTTGTACTCTGGCTTCACGGAGCTCATTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HTRVASCRCHCL*FVLWLHGAHFG Trigger: CCCAAAATGAGCTCCGTGAAGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CCA 72 bp | GAGATACCAGGTATCTTTGTTGTCTCTTATAACCAATaGTCCCCCAGAATCACCCCTGCAGGCATCGTAATT | + |
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Preference number: 6 (lower is better) Translates to: EIPGIFVVSYNQ*SPRITPAGIVI Trigger: AATTACGATGCCTGCAGGGGTGATTCTGGGGGACCATTGGTTATAAGAGACAACAAAGATACCTGGTATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | TCATTGCCATACACGTGTCGCTTCTTGCAGATGTCATaGCTTATGATTTGTACTCTGGCTTCACGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLPYTCRFLQMS*LMICTLASRSS Trigger: TGAGCTCCGTGAAGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 90 bp | CAGAACATCCCACGTTTTATTTCATTGCCATACACGTGTCGCTTCTaGCAGATGTCATTGCTTATGATTTGTACTCTGGCTTCACGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QNIPRFISLPYTCRF*QMSLLMICTLASRS Trigger: GCTCCGTGAAGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAATAAAACGTGGGATGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | TGTTGTTCCAAAACTAAGAGTCCATTGGCGAGGGTTTaGATTGGTTCTAAAACAGTGTGCTGCAGTGACGAC | + |
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Preference number: 6 (lower is better) Translates to: CCSKTKSPLARV*IGSKTVCCSDD Trigger: GTCGTCACTGCAGCACACTGTTTTAGAACCAATTCAAACCCTCGCCAATGGACTCTTAGTTTTGGAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS GCA 72 bp | GAAATCCAGCACAGAACATCCCACGTTTTATTTCATTaGCATACACGTGTCGCTTCTTGCAGATGTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: EIQHRTSHVLFH*HTRVASCRCHC Trigger: GCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAATAAAACGTGGGATGTTCTGTGCTGGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | AGAAATCCAGCACAGAACATCCCACGTTTTATTTCATaGCCATACACGTGTCGCTTCTTGCAGATGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: RNPAQNIPRFIS*PYTCRFLQMSL Trigger: CAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAATAAAACGTGGGATGTTCTGTGCTGGATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 90 bp | CGTTTTATTTCATTGCCATACACGTGTCGCTTCTTGCAGATGTCATaGCTTATGATTTGTACTCTGGCTTCACGGAGCTCATTTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RFISLPYTCRFLQMS*LMICTLASRSSFWD Trigger: ATCCCAAAATGAGCTCCGTGAAGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAATAAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS TCA 72 bp | TCAGTTGATTTGAGCTCTTTTGTCCTGAGTTGCTATTaGCTTGAATATCGAACACGAGGAAGAGAGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SVDLSSFVLSCY*LEYRTRGREPE Trigger: TTCTGGCTCTCTTCCTCGTGTTCGATATTCAAGTCAATAGCAACTCAGGACAAAAGAGCTCAAATCAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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| CDS CAA 72 bp | CCACGTTTTATTTCATTGCCATACACGTGTCGCTTCTaGCAGATGTCATTGCTTATGATTTGTACTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PRFISLPYTCRF*QMSLLMICTLA Trigger: AGCCAGAGTACAAATCATAAGCAATGACATCTGCAAGAAGCGACACGTGTATGGCAATGAAATAAAACGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101073.3 |
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