Pregenerated sensors for TMPPE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079260Ensembl transcript IDs: ENSMUST00000111820.4
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTAACGGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTaGGTTTGGTCAAGAAGTACCATTTCCAGCCACCCCACACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PNGLNPQETSVPASP*VWSRSTISSHPTPC Trigger: GCAGGGTGTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCCGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR GCA 90 bp | TTATCTGAAGAGTTAAGCCTGCCCGGACTTGCCAGGCATCCCCACTaGAAACGCTGTTCCCAGCAGACTGTGGCCAAAGTCGTGCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: LSEELSLPGLARHPH*KRCSQQTVAKVVLA Trigger: TGCCAGCACGACTTTGGCCACAGTCTGCTGGGAACAGCGTTTGCAGTGGGGATGCCTGGCAAGTCCGGGCAGGCTTAACTCTTCAGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 90 bp | GGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTTaGTCAAGAAGTACCATTTCCAGCCACCCCACACCCTGCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GLNPQETSVPASPCV*SRSTISSHPTPCKR Trigger: CCTTTTGCAGGGTGTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 90 bp | CTTCCATGGCCAAGCAGACCCACGGGTGTATCGTCAAAAAGCAATTaGTTATCTGAAGAGTTAAGCCTGCCCGGACTTGCCAGGCATCCC | + |
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Preference number: 1 (lower is better) Translates to: LPWPSRPTGVSSKSN*LSEELSLPGLARHP Trigger: GGGATGCCTGGCAAGTCCGGGCAGGCTTAACTCTTCAGATAATCAATTGCTTTTTGACGATACACCCGTGGGTCTGCTTGGCCATGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 90 bp | CACAAAGACTACACAGAACAGGGACTCAGAGCTGCCATTAAGGGATaGCAGTCATCCCCTACCACAGTCCCCATGATTTCATCTCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: HKDYTEQGLRAAIKG*QSSPTTVPMISSQA Trigger: GGCTTGAGATGAAATCATGGGGACTGTGGTAGGGGATGACTGCCATCCCTTAATGGCAGCTCTGAGTCCCTGTTCTGTGTAGTCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 90 bp | ATTGACAAAGAGGAAAGTGATACTCTCCTCAGGCAAGCAGAGAGGTaGTGCCTCTCTCAACATGGCCCATGCCCAAACCAGCTATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: IDKEESDTLLRQAER*CLSQHGPCPNQLSL Trigger: TAGAGATAGCTGGTTTGGGCATGGGCCATGTTGAGAGAGGCATCACCTCTCTGCTTGCCTGAGGAGAGTATCACTTTCCTCTTTGTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTACAGCACCCCTCATGGTaGAGACAGAAAGGTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GGSSPSHTELEPGVEGHLQHPSW*RQKGPH Trigger: ATGGGGACCTTTCTGTCTGCACCATGAGGGGTGCTG...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR CCA 90 bp | CGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCACCCCACTCGTGCTGGCAAGGCTaGGACGGAGCAGGAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: RSCLSLRLVKKYHFQPPHSCWQG*DGAGDG Trigger: TCCATCTCCTGCTCCGTCCCAGCCTTGCCAGCACGA...GTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR TCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGCAAACCTGGCTGGTGTaGTGGGTAGGAGGTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: NLQGQSWVIPVAASGFLWQTWLV*WVGGAN Trigger: ATTGGCACCTCCTACCCATCACACCAGCCAGGTTTG...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGGGAAGATGCCTCTCTCAACATaGCCCATGCCCAAACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSPSHTELEPGVEGHLGKMPLST*PMPKPA Trigger: AGCTGGTTTGGGCATGGGCCATGTTGAGAGAGGCAT...CTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CAA 90 bp | CGGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTaGGTCAAGAAGTACCATTTCCAGCCACCCCACACCCTGCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RAKPTGDKRSCLSLR*VKKYHFQPPHTLQK Trigger: CTTTTGCAGGGTGTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR CCA 90 bp | AACGGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCAATGTTCGCACTTCCATaGCCAAGCAGACCCACGGGT | + |
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Preference number: 2 (lower is better) Translates to: NGLNPQETSVPASPCVWSMFALP*PSRPTG Trigger: ACCCGTGGGTCTGCTTGGCCATGGAAGTGCGAACAT...TGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTAAAGCAATTGATTATCTaGAGAGTTAAGCCTGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: GNLQGQSWVIPVAASGFLKQLII*RVKPAR Trigger: CCGGGCAGGCTTAACTCTTCAGATAATCAATTGCTT...TAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTACAGCTGGAAAACAAATaGATGTTCGCACTTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: GNLQGQSWVIPVAASGFLQLENK*MFALPW Trigger: CCATGGAAGTGCGAACATGCATTTGTTTTCCAGCTG...TAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR GCA 90 bp | CAATGGGGCTTGCCGATGCCCTCGATAAAGGTGACCTTGATTGACAAAGAGGAAGTTCCTGCCTCTCCCTaGGTTTGGTCAAGAAGTACC | + |
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Preference number: 2 (lower is better) Translates to: QWGLPMPSIKVTLIDKEEVPASP*VWSRST Trigger: GGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAAC...TTCCTCTTTGTCAATCAAGGTCACCTTTATCGAGGGCATCGGCAAGCCCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCCCTCTCTGCAGCAGCTaGAAAACAAATGCATGTTCG | + |
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Preference number: 2 (lower is better) Translates to: RGISSHPVSFLTPKHRRSPLCSS*KTNACS Trigger: CGAACATGCATTTGTTTTCCAGCTGCTGCAGAGAGG...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CAA 90 bp | CCCATGTTTCAATGGGGCTTGCCGATGCCCTCGATAAAGGTGACCTaGATTGACAAAGAGGAAAGTGATACTCTCCTCAGGCAAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PMFQWGLPMPSIKVT*IDKEESDTLLRQAE Trigger: CTCTGCTTGCCTGAGGAGAGTATCACTTTCCTCTTTGTCAATCAAGGTCACCTTTATCGAGGGCATCGGCAAGCCCCATTGAAACATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR GCA 72 bp | GCAAACGCTGTTCCCAGCAGACTGTGGCCAAAGTCGTaGTGGCAAGGCTGGGACGGAGCAGGAGATGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ANAVPSRLWPKS*WQGWDGAGDGG Trigger: TCCTCCATCTCCTGCTCCGTCCCAGCCTTGCCAGCACGACTTTGGCCACAGTCTGCTGGGAACAGCGTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | AACGCTGTTCCCAGCAGACTGTGGCCAAAGTCGTGCTaGCAAGGCTGGGACGGAGCAGGAGATGGAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: NAVPSRLWPKSC*QGWDGAGDGGR Trigger: CCTTCCTCCATCTCCTGCTCCGTCCCAGCCTTGCCAGCACGACTTTGGCCACAGTCTGCTGGGAACAGCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR GCA 72 bp | GAGTTAAGCCTGCCCGGACTTGCCAGGCATCCCCACTaGAAACGCTGTTCCCAGCAGACTGTGGCCAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: ELSLPGLARHPH*KRCSQQTVAKV Trigger: GACTTTGGCCACAGTCTGCTGGGAACAGCGTTTGCAGTGGGGATGCCTGGCAAGTCCGGGCAGGCTTAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | CCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTTaGTCAAGAAGTACCATTTCCAGCCACCCCACACCC | + |
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Preference number: 3 (lower is better) Translates to: PQETSVPASPCV*SRSTISSHPTP Trigger: GGGTGTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | GGCCCAGCCACCCAGCACAGTAATCAGCACCCCTCATaGTGCAGACAGAAAGGTCCCCATGTTTCAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: GPATQHSNQHPS*CRQKGPHVSMG Trigger: CCCCATTGAAACATGGGGACCTTTCTGTCTGCACCATGAGGGGTGCTGATTACTGTGCTGGGTGGCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 72 bp | TTAAGGGATGGCAGTCATCCCCTACCACAGTCCCCATaGTTTCATCTCAAGCCACCCTGGCCCAGCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: LRDGSHPLPQSP*FHLKPPWPSHP Trigger: TGGGTGGCTGGGCCAGGGTGGCTTGAGATGAAATCATGGGGACTGTGGTAGGGGATGACTGCCATCCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR GCA 72 bp | CTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTaGGTTTGGTCAAGAAGTACCATTTCCAGCCACCCC | + |
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Preference number: 3 (lower is better) Translates to: LNPQETSVPASP*VWSRSTISSHP Trigger: GGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 72 bp | GAGGAAAGTGATACTCTCCTCAGGCAAGCAGAGAGGTaGTGCCTCTCTCAACATGGCCCATGCCCAAACCAG | + |
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Preference number: 3 (lower is better) Translates to: EESDTLLRQAER*CLSQHGPCPNQ Trigger: CTGGTTTGGGCATGGGCCATGTTGAGAGAGGCATCACCTCTCTGCTTGCCTGAGGAGAGTATCACTTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | CAGCAGCTGGAAAACAAATGCATGTTCGCACTTCCATaGCCAAGCAGACCCACGGGTGTATCGTCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: QQLENKCMFALP*PSRPTGVSSKS Trigger: GCTTTTTGACGATACACCCGTGGGTCTGCTTGGCCATGGAAGTGCGAACATGCATTTGTTTTCCAGCTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | TACACAGAACAGGGACTCAGAGCTGCCATTAAGGGATaGCAGTCATCCCCTACCACAGTCCCCATGATTTCA | + |
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Preference number: 3 (lower is better) Translates to: YTEQGLRAAIKG*QSSPTTVPMIS Trigger: TGAAATCATGGGGACTGTGGTAGGGGATGACTGCCATCCCTTAATGGCAGCTCTGAGTCCCTGTTCTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 72 bp | ACCCACGGGTGTATCGTCAAAAAGCAATTGATTATCTaGAGAGTTAAGCCTGCCCGGACTTGCCAGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: THGCIVKKQLII*RVKPARTCQAS Trigger: GGATGCCTGGCAAGTCCGGGCAGGCTTAACTCTTCAGATAATCAATTGCTTTTTGACGATACACCCGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | CCTCAGGCAAGCAGAGAGGTGATGCCTCTCTCAACATaGCCCATGCCCAAACCAGCTATCTCTAATCAAATA | + |
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Preference number: 3 (lower is better) Translates to: PQASREVMPLST*PMPKPAISNQI Trigger: TATTTGATTAGAGATAGCTGGTTTGGGCATGGGCCATGTTGAGAGAGGCATCACCTCTCTGCTTGCCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 72 bp | TCCTCACCCCCAAACACAGAAGGAGCCTCTCCTAAATaGTCTCACACAAAGACTACACAGAACAGGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: SSPPNTEGASPK*SHTKTTQNRDS Trigger: TGAGTCCCTGTTCTGTGTAGTCTTTGTGTGAGATCATTTAGGAGAGGCTCCTTCTGTGTTTGGGGGTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CCA 72 bp | AGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATaGGTAGACAAGAAACCTCAGCTTCTCTCTAAAATC | + |
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Preference number: 3 (lower is better) Translates to: SWVIPVAASGFL*VDKKPQLLSKI Trigger: GATTTTAGAGAGAAGCTGAGGTTTCTTGTCTACCCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR TCA 72 bp | CTAGCTATGAGTGAACTGAAGCCTTCCTCAAACAAGTaGACTATTTTGAAGGGAACGTGGGGCTCTAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LAMSELKPSSNK*TILKGTWGSRV Trigger: GACCCTAGAGCCCCACGTTCCCTTCAAAATAGTTCACTTGTTTGAGGAAGGCTTCAGTTCACTCATAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAAGCCAGCGCCAGGCCTaGAGCTCAAGGGTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GGSSPSHTELEPGVEGHLSQRQA*SSRVSA Trigger: GGCTGAGACCCTTGAGCTCCAGGCCTGGCGCTGGCT...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGGGAAGCTGCCAGCGCAGGCCTaGGCACCAGGTGCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSPSHTELEPGVEGHLGKLPAQA*APGALS Trigger: AGACAAGGCACCTGGTGCTCAGGCCTGCGCTGGCAG...CTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | TTAGGAGGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCAGGAAGACCGTGGCTaGAGCCAGGGCAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LGGGSSPSHTELEPGVEGQEDRG*SQGSLG Trigger: TCCAAGGCTGCCCTGGCTGCAGCCACGGTCTTCCTG...GCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCCTCCTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGGCCCAAAGGAGCCACTaGCGTCCGCAGGACAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NLQGQSWVIPVAASGFLWAQRSH*RPQDRG Trigger: GCCTCTGTCCTGCGGACGGCAGTGGCTCCTTTGGGC...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGCAGCCAGGGCAGCCTTaGAGCCCAGCGACAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: NLQGQSWVIPVAASGFLWQPGQP*SPATTA Trigger: GGCAGTTGTCGCTGGGCTCCAAGGCTGCCCTGGCTG...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR TCA 90 bp | AACGGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCACGGCAGGGGAATGGCTaGGGTTGCTCACGGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NGLNPQETSVPASPCVWSRQGNG*GCSRCS Trigger: GGAGCACCGTGAGCAACCTCAGCCATTCCCCTGCCG...TGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | AGCAGCTGGAAAACAAATGCATGTTCGCACTTCCATGGCCAAGCAGACCCACGGCGCCGTCACGGCCACTaGCAGCGCAGGCCTGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSWKTNACSHFHGQADPRRRHGH*QRRPEH Trigger: GTGCTCAGGCCTGCGCTGGCAGTGGCCGTGACGGCG...CCGTGGGTCTGCTTGGCCATGGAAGTGCGAACATGCATTTGTTTTCCAGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTATGGTCCTGCCCACTGTaGGCCCCAAGTGAATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGSSPSHTELEPGVEGHLWSCPL*APSECQ Trigger: CTGACATTCACTTGGGGCCCACAGTGGGCAGGACCA...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGAGGCGGGAATGGAGCTaGCCCAAAGGAGCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: NLQGQSWVIPVAASGFLWRREWS*PKGATA Trigger: GGCAGTGGCTCCTTTGGGCCAGCTCCATTCCCGCCT...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGGGAAGCCTGGAGGGCTCTCTTaGCAGCCAGAGGCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SSPSHTELEPGVEGHLGKPGGLS*QPEADE Trigger: CTCATCAGCCTCTGGCTGCCAAGAGAGCCCTCCAGG...CTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGGGAAGTCTCCATCTTGGTCCTaGCCACTGTGGGCCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SSPSHTELEPGVEGHLGKSPSWS*PLWAPS Trigger: ACTTGGGGCCCACAGTGGGCAGGACCAAGATGGAGA...CTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGATATCTGGCCGAGCCTaGAGGGCTCTCTTGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NLQGQSWVIPVAASGFLWISGRA*RALLAA Trigger: GGCTGCCAAGAGAGCCCTCCAGGCTCGGCCAGATAT...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAACTGTGGGCCCCAAGTaGATGTCAGAAAGGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: GGSSPSHTELEPGVEGHLTVGPK*MSERST Trigger: TGTGCTCCTTTCTGACATTCACTTGGGGCCCACAGT...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | TGGGGCAACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCGAAGAAGCTGGAATGTaGCAGGGCCAGAAACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WGNLQGQSWVIPVAASGFEEAGM*QGQKRH Trigger: ATGGCGTTTCTGGCCCTGGCACATTCCAGCTTCTTC...GAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | CGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCACCCCACTCCACGGCAGGGGAATaGCTGAGGTTGCTCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: RSCLSLRLVKKYHFQPPHSTAGE*LRLLTV Trigger: CACCGTGAGCAACCTCAGCCATTCCCCTGCCGTGGA...GTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCTGGACAGGAAGACCGTaGCTGCAGCCAGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RGISSHPVSFLTPKHRRSWTGRP*LQPGQP Trigger: AGGCTGCCCTGGCTGCAGCCACGGTCTTCCTGTCCA...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AACGGGCTAAACCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCACACGGTTTTCACCACTaGGGGCTGGGCAGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGLNPQETSVPASPCVWSHGFHH*GLGSIQ Trigger: CTGAATGCTGCCCAGCCCCCAGTGGTGAAAACCGTG...TGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGGTTTAGCCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCGATGGTGGCATCGTCTaGGCTGCAGCCCTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGISSHPVSFLTPKHRRSDGGIV*AAALQS Trigger: GCTCTGGAGGGCTGCAGCCCAGACGATGCCACCATC...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CAA 72 bp | CCCACAGGAGACAAGCGTTCCTGCCTCTCCCTGCGTTaGGTCAAGAAGTACCATTTCCAGCCACCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: PTGDKRSCLSLR*VKKYHFQPPHT Trigger: GGTGTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCTCCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCGGCCTGAGCACCAGGTaGCTTGTCTTGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGISSHPVSFLTPKHRRSGLSTR*LVLSRL Trigger: CAGCCTGGACAAGACAAGGCACCTGGTGCTCAGGCC...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | AGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCTGGCATCGTCTGGGCTaGAGCCCTCCAGAGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAFLPLPAFGQEVPFPAWHRLG*SPPEPC Trigger: ACAAGGCTCTGGAGGGCTGCAGCCCAGACGATGCCA...GGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGCCAGCTTCCAAATCTaGAAACAGGTAGATTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSPSHTELEPGVEGHLASFQI*KQVDST Trigger: CGTGGAATCTACCTGTTTCCAGATTTGGAAGCTGGC...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | GGCAACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTAGATCAAGTTTATATCTaGCCGAGCCTGGAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNLQGQSWVIPVAASGFLDQVYI*PSLEGS Trigger: AGAGCCCTCCAGGCTCGGCCAGATATAAACTTGATC...TAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CAA 72 bp | CTTTTAGGAGGAGGCAGCTCCCCCTCGCACACTGAGTaGGAACCTGGAGTGGAGGGCCATCTAGGGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGGGSSPSHTE*EPGVEGHLGKY Trigger: ATACTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCCTCCTAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR TCA 90 bp | AACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCCTATGGCCAAGAAGAGCATGGTaGAGAAGCTGGAATGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLQGQSWVIPVAASGFLWPRRAW*RSWNVP Trigger: TGGCACATTCCAGCTTCTTCACCATGCTCTTCTTGG...CCATAGGAAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAAAACAAATGCATGTTCGCACTTCCATGGCCAAGCAGACCCACGGGTAGCGGGAGAGGATCATaGACAGGAAGACCGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLENKCMFALPWPSRPTGSGRGS*TGRPWL Trigger: CAGCCACGGTCTTCCTGTCCATGATCCTCTCCCGCT...ACCCGTGGGTCTGCTTGGCCATGGAAGTGCGAACATGCATTTGTTTTCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCTTCACCACTGGGGGCTaGGCAGCATTCAGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQAFLPLPAFGQEVPFPAFTTGG*AAFRRP Trigger: TGGCCTTCTGAATGCTGCCCAGCCCCCAGTGGTGAA...GGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR GCA 90 bp | CGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCACCCCACCCTTGTCAAGGTCCATaGCATGCCCAGAGTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSCLSLRLVKKYHFQPPHPCQGP*HAQSSE Trigger: TTCACTACTCTGGGCATGGCATGGACCTTGACAAGG...GTGGGGTGGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCCAAACATCTCCATCTTaGTCCTGCCCACTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGISSHPVSFLTPKHRRSQTSPS*SCPLWA Trigger: GGCCCACAGTGGGCAGGACCAAGATGGAGATGTTTG...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR TCA 90 bp | AGAGGTATCTCATCACACCCAGTGTCCTTCCTCACCCCCAAACACAGAAGGAGCAAGATCTGCCCTGCGTaGGTGTGTCCAGAAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RGISSHPVSFLTPKHRRSKICPA*VCPERI Trigger: GATCCTTTCTGGACACACTCACGCAGGGCAGATCTT...GCTCCTTCTGTGTTTGGGGGTGAGGAAGGACACTGGGTGTGATGAGATACCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | CAATGGGGCTTGCCGATGCCCTCGATAAAGGTGACCTTGATTGACAAAGAGGAACGGGCAGCTGATGGATaGGCACCTCCACGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWGLPMPSIKVTLIDKEERAADG*APPRFS Trigger: TGAAAACCGTGGAGGTGCCCATCCATCAGCTGCCCG...TTCCTCTTTGTCAATCAAGGTCACCTTTATCGAGGGCATCGGCAAGCCCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAAAACAAATGCATGTTCGCACTTCCATGGCCAAGCAGACCCACGGGTGGTAGGCCTGCTCCATaGCATTCAAGATACAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLENKCMFALPWPSRPTGGRPAP*HSRYKG Trigger: TCCTTTGTATCTTGAATGCCATGGAGCAGGCCTACC...ACCCGTGGGTCTGCTTGGCCATGGAAGTGCGAACATGCATTTGTTTTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| 3UTR CAA 72 bp | CAATGGGGCTTGCCGATGCCCTCGATAAAGGTGACCTaGATTGACAAAGAGGAAAGTGATACTCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWGLPMPSIKVT*IDKEESDTLLR Trigger: CCTGAGGAGAGTATCACTTTCCTCTTTGTCAATCAAGGTCACCTTTATCGAGGGCATCGGCAAGCCCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CCA 90 bp | AGACAAGCGTTCCTGCCTCTCCCTGCGTTTGGTCAAGAAGTACCATTTCCAGCCATAGTAGGCTGTACCTaGGCTAACATACACAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAFLPLPAFGQEVPFPAIVGCT*ANIHKR Trigger: ACGTTTGTGTATGTTAGCCCAGGTACAGCCTACTAT...GGCTGGAAATGGTACTTCTTGACCAAACGCAGGGAGAGGCAGGAACGCTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | GAAGTAGGTGCCAAGGCGGGAATGGAGCTGGCCCAAAGGAGCCACTaGCGTCCGCAGGACAGAGGCTTCCGAGTCGGAGAGGTCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EVGAKAGMELAQRSH*RPQDRGFRVGEVAH Trigger: GTGGGCGACCTCTCCGACTCGGAAGCCTCTGTCCTGCGGACGGCAGTGGCTCCTTTGGGCCAGCTCCATTCCCGCCTTGGCACCTACTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAGGGAAGGCAGCCAGGGCAGCCTaGGAGCCCAGCGACAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSHTELEPGVEGHLGKAARAA*EPSDNC Trigger: GCAGTTGTCGCTGGGCTCCAAGGCTGCCCTGGCTGC...CTTCCCTAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | GGAGGCGGGCAGCTGATGGATGGGCACCTCCACGGTTTTCACCACTaGGGGCTGGGCAGCATTCAGAAGGCCAATGGTACTGAGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGQLMDGHLHGFHH*GLGSIQKANGTEHR Trigger: GCGGTGCTCAGTACCATTGGCCTTCTGAATGCTGCCCAGCCCCCAGTGGTGAAAACCGTGGAGGTGCCCATCCATCAGCTGCCCGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | AGCATTCAGAAGGCCAATGGTACTGAGCACCGCCGTCACGGCCACTaGCAGCGCAGGCCTGAGCACCAGGTGCCTTGTCTTGTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIQKANGTEHRRHGH*QRRPEHQVPCLVQA Trigger: AGCCTGGACAAGACAAGGCACCTGGTGCTCAGGCCTGCGCTGGCAGTGGCCGTGACGGCGGTGCTCAGTACCATTGGCCTTCTGAATGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | GCACCAGGTGCCTTGTCTTGTCCAGGCTGCCCACCACCCTACCGCTaGGCCAGGCTAAGAACTGGTAGGCCTGCTCCATGGCATTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: APGALSCPGCPPPYR*ARLRTGRPAPWHSR Trigger: TCTTGAATGCCATGGAGCAGGCCTACCAGTTCTTAGCCTGGCGCAGCGGTAGGGTGGTGGGCAGCCTGGACAAGACAAGGCACCTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CAA 90 bp | CTGGGGCAACCTGCAGGGGCAGAGCTGGGTCATACCCGTGGCAGCTTCAGGTTTCGTCGCCTTGCCCACTaGGTAGAGCCCAGCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGQPAGAELGHTRGSFRFRRLAH*VEPSKE Trigger: TTCTTTGCTGGGCTCTACCAAGTGGGCAAGGCGACG...AAACCTGAAGCTGCCACGGGTATGACCCAGCTCTGCCCCTGCAGGTTGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | CAGCCAGAGGCTGATGAGCCAGTAAGATGGTGGCATCGTCTGGGCTaGAGCCCTCCAGAGCCTTGTCAAGGTCCATGCCATGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QPEADEPVRWWHRLG*SPPEPCQGPCHAQS Trigger: ACTCTGGGCATGGCATGGACCTTGACAAGGCTCTGGAGGGCTGCAGCCCAGACGATGCCACCATCTTACTGGCTCATCAGCCTCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGCTCCCCCTCGCACACTGAGTTGGAACCTGGAGTGGAGGGCCATCTAACAAACATCTCCATCTaGGTCCTGCCCACTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSSPSHTELEPGVEGHLTNISI*VLPTVG Trigger: GCCCACAGTGGGCAGGACCAAGATGGAGATGTTTGT...TAGATGGCCCTCCACTCCAGGTTCCAACTCAGTGTGCGAGGGGGAGCTGCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 90 bp | TGCCCACTGTGGGCCCCAAGTGAATGTCAGAAAGGAGCACAATCTTaGGGTTGTCCATGGAGGCGGGCAGCTGATGGATGGGCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPLWAPSECQKGAQS*GCPWRRAADGWAPP Trigger: TGGAGGTGCCCATCCATCAGCTGCCCGCCTCCATGGACAACCTCAAGATTGTGCTCCTTTCTGACATTCACTTGGGGCCCACAGTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | GCCAGCTTCCAAATCTGGAAACAGGTAGATTCCACGGCAGGGGAATaGCTGAGGTTGCTCACGGTGCTCCGCCAGATGTACGAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASFQIWKQVDSTAGE*LRLLTVLRQMYEEP Trigger: TGGCTCCTCGTACATCTGGCGGAGCACCGTGAGCAACCTCAGCCATTCCCCTGCCGTGGAATCTACCTGTTTCCAGATTTGGAAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | TACGAGGAGCCAATGAGCATGATCGAGTTTACAAACAGGATCAGCTaGAGGCGGAACAGCCAGCGCCAGGCCTGGAGCTCAAGGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YEEPMSMIEFTNRIS*RRNSQRQAWSSRVS Trigger: TGAGACCCTTGAGCTCCAGGCCTGGCGCTGGCTGTTCCGCCTGCAGCTGATCCTGTTTGTAAACTCGATCATGCTCATTGGCTCCTCGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | GATCTGCCCTGCGTGAGTGTGTCCAGAAAGGATCAAGTTTATATCTaGCCGAGCCTGGAGGGCTCTCTTGGCAGCCAGAGGCTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLPCVSVSRKDQVYI*PSLEGSLGSQRLMS Trigger: GCTCATCAGCCTCTGGCTGCCAAGAGAGCCCTCCAGGCTCGGCCAGATATAAACTTGATCCTTTCTGGACACACTCACGCAGGGCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | TGCCCTGCTCCCCAACCTCATGGGTATCCCATAGTAGGCTGTACCTaGGCTAACATACACAAACGTCGCCTTGCCCACTTGGTAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPAPQPHGYPIVGCT*ANIHKRRLAHLVEP Trigger: GGGCTCTACCAAGTGGGCAAGGCGACGTTTGTGTATGTTAGCCCAGGTACAGCCTACTATGGGATACCCATGAGGTTGGGGAGCAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 90 bp | GCAGGACAGAGGCTTCCGAGTCGGAGAGGTCGCCCACGATCACTGTaGTGTCTGGTTCTAGCCTGTTCACCATCCTCACAAACATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGQRLPSRRGRPRSL*CLVLACSPSSQTSP Trigger: TGGAGATGTTTGTGAGGATGGTGAACAGGCTAGAACCAGACATCACAGTGATCGTGGGCGACCTCTCCGACTCGGAAGCCTCTGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | CAGAAAGGATCAAGTTTATATCTGGCCGAGCCTGGAGGGCTCTCTTaGCAGCCAGAGGCTGATGAGCCAGTAAGATGGTGGCATCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKGSSLYLAEPGGLS*QPEADEPVRWWHRL Trigger: CAGACGATGCCACCATCTTACTGGCTCATCAGCCTCTGGCTGCCAAGAGAGCCCTCCAGGCTCGGCCAGATATAAACTTGATCCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS-3UTR CAA 90 bp | CAATGGGGCTTGCCGATGCCCTCGATAAAGGTGACCTTGATTGACAAAGAGGAACAGCCCTCCAGAGCCTaGTCAAGGTCCATGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QWGLPMPSIKVTLIDKEEQPSRA*SRSMPC Trigger: GCATGGCATGGACCTTGACAAGGCTCTGGAGGGCTG...TTCCTCTTTGTCAATCAAGGTCACCTTTATCGAGGGCATCGGCAAGCCCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 90 bp | CTCACAAACATCTCCATCTTGGTCCTGCCCACTGTGGGCCCCAAGTaGATGTCAGAAAGGAGCACAATCTTGAGGTTGTCCATGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTNISILVLPTVGPK*MSERSTILRLSMEA Trigger: CGCCTCCATGGACAACCTCAAGATTGTGCTCCTTTCTGACATTCACTTGGGGCCCACAGTGGGCAGGACCAAGATGGAGATGTTTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | CCGGGGGCAGAAATCTTTACATTCTCATTATGTAGGGGCCGGACGTaGAAGGATTCCAGCAGTGTGAACCAGTTGCTGACGTCCGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGAEIFTFSLCRGRT*KDSSSVNQLLTSDV Trigger: TACATCGGACGTCAGCAACTGGTTCACACTGCTGGAATCCTTGCACGTCCGGCCCCTACATAATGAGAATGTAAAGATTTCTGCCCCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 90 bp | TGTCTGGTTCTAGCCTGTTCACCATCCTCACAAACATCTCCATCTTaGTCCTGCCCACTGTGGGCCCCAAGTGAATGTCAGAAAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLVLACSPSSQTSPS*SCPLWAPSECQKGA Trigger: TGCTCCTTTCTGACATTCACTTGGGGCCCACAGTGGGCAGGACCAAGATGGAGATGTTTGTGAGGATGGTGAACAGGCTAGAACCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 90 bp | GTTCTAGCCTGTTCACCATCCTCACAAACATCTCCATCTTGGTCCTaGCCACTGTGGGCCCCAAGTGAATGTCAGAAAGGAGCACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLACSPSSQTSPSWS*PLWAPSECQKGAQS Trigger: AGATTGTGCTCCTTTCTGACATTCACTTGGGGCCCACAGTGGGCAGGACCAAGATGGAGATGTTTGTGAGGATGGTGAACAGGCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 72 bp | CTGGGGGCTGGGCAGCATTCAGAAGGCCAATGGTACTaGGCACCGCCGTCACGGCCACTGCCAGCGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGAGQHSEGQWY*APPSRPLPAQA Trigger: GGCCTGCGCTGGCAGTGGCCGTGACGGCGGTGCTCAGTACCATTGGCCTTCTGAATGCTGCCCAGCCCCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 72 bp | GCCAAGGCGGGAATGGAGCTGGCCCAAAGGAGCCACTaGCGTCCGCAGGACAGAGGCTTCCGAGTCGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AKAGMELAQRSH*RPQDRGFRVGE Trigger: CTCTCCGACTCGGAAGCCTCTGTCCTGCGGACGGCAGTGGCTCCTTTGGGCCAGCTCCATTCCCGCCTTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | AGGATCAGCTGCAGGCGGAACAGCCAGCGCCAGGCCTaGAGCTCAAGGGTCTCAGCCAGAAAGGAGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RISCRRNSQRQA*SSRVSARKERE Trigger: CTCCCGCTCCTTTCTGGCTGAGACCCTTGAGCTCCAGGCCTGGCGCTGGCTGTTCCGCCTGCAGCTGATCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | CAAGGGTCTCAGCCAGAAAGGAGCGGGAGAGGATCATaGACAGGAAGACCGTGGCTGCAGCCAGGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QGSQPERSGRGS*TGRPWLQPGQP Trigger: AGGCTGCCCTGGCTGCAGCCACGGTCTTCCTGTCCATGATCCTCTCCCGCTCCTTTCTGGCTGAGACCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
||
| CDS CCA 72 bp | CTCTCTTGGCAGCCAGAGGCTGATGAGCCAGTAAGATaGTGGCATCGTCTGGGCTGCAGCCCTCCAGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSWQPEADEPVR*WHRLGCSPPEP Trigger: AGGCTCTGGAGGGCTGCAGCCCAGACGATGCCACCATCTTACTGGCTCATCAGCCTCTGGCTGCCAAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | TGGATGGGCACCTCCACGGTTTTCACCACTGGGGGCTaGGCAGCATTCAGAAGGCCAATGGTACTGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: WMGTSTVFTTGG*AAFRRPMVLST Trigger: GGTGCTCAGTACCATTGGCCTTCTGAATGCTGCCCAGCCCCCAGTGGTGAAAACCGTGGAGGTGCCCATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
||
| CDS CCA 72 bp | TCTTGGCAGCCAGAGGCTGATGAGCCAGTAAGATGGTaGCATCGTCTGGGCTGCAGCCCTCCAGAGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SWQPEADEPVRW*HRLGCSPPEPC Trigger: ACAAGGCTCTGGAGGGCTGCAGCCCAGACGATGCCACCATCTTACTGGCTCATCAGCCTCTGGCTGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 72 bp | GCTGATGAGCCAGTAAGATGGTGGCATCGTCTGGGCTaGAGCCCTCCAGAGCCTTGTCAAGGTCCATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ADEPVRWWHRLG*SPPEPCQGPCH Trigger: ATGGCATGGACCTTGACAAGGCTCTGGAGGGCTGCAGCCCAGACGATGCCACCATCTTACTGGCTCATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
||
| CDS CCA 72 bp | CAGCTGATGGATGGGCACCTCCACGGTTTTCACCACTaGGGGCTGGGCAGCATTCAGAAGGCCAATGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: QLMDGHLHGFHH*GLGSIQKANGT Trigger: AGTACCATTGGCCTTCTGAATGCTGCCCAGCCCCCAGTGGTGAAAACCGTGGAGGTGCCCATCCATCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CAA 72 bp | AAACAGGTAGATTCCACGGCAGGGGAATGGCTGAGGTaGCTCACGGTGCTCCGCCAGATGTACGAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KQVDSTAGEWLR*LTVLRQMYEEP Trigger: TGGCTCCTCGTACATCTGGCGGAGCACCGTGAGCAACCTCAGCCATTCCCCTGCCGTGGAATCTACCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 72 bp | CCAATGAGCATGATCGAGTTTACAAACAGGATCAGCTaGAGGCGGAACAGCCAGCGCCAGGCCTGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PMSMIEFTNRIS*RRNSQRQAWSS Trigger: TGAGCTCCAGGCCTGGCGCTGGCTGTTCCGCCTGCAGCTGATCCTGTTTGTAAACTCGATCATGCTCATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CAA 90 bp | CAAATCTGGAAACAGGTAGATTCCACGGCAGGGGAATGGCTGAGGTaGCTCACGGTGCTCCGCCAGATGTACGAGGAGCCAATGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: QIWKQVDSTAGEWLR*LTVLRQMYEEPMSM Trigger: CATGCTCATTGGCTCCTCGTACATCTGGCGGAGCACCGTGAGCAACCTCAGCCATTCCCCTGCCGTGGAATCTACCTGTTTCCAGATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 72 bp | ACATGTAGGGTTCCTCGGCCACCAAGAAGAGCATGGTaGAGAAGCTGGAATGTGCCAGGGCCAGAAACGCCA | + |
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Preference number: 6 (lower is better) Translates to: TCRVPRPPRRAW*RSWNVPGPETP Trigger: TGGCGTTTCTGGCCCTGGCACATTCCAGCTTCTTCACCATGCTCTTCTTGGTGGCCGAGGAACCCTACATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS TCA 72 bp | AGGCTTCCGAGTCGGAGAGGTCGCCCACGATCACTGTaGTGTCTGGTTCTAGCCTGTTCACCATCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: RLPSRRGRPRSL*CLVLACSPSSQ Trigger: TTGTGAGGATGGTGAACAGGCTAGAACCAGACATCACAGTGATCGTGGGCGACCTCTCCGACTCGGAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | CAAATCTGGAAACAGGTAGATTCCACGGCAGGGGAATaGCTGAGGTTGCTCACGGTGCTCCGCCAGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: QIWKQVDSTAGE*LRLLTVLRQMY Trigger: GTACATCTGGCGGAGCACCGTGAGCAACCTCAGCCATTCCCCTGCCGTGGAATCTACCTGTTTCCAGATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | TCAAGTTTATATCTGGCCGAGCCTGGAGGGCTCTCTTaGCAGCCAGAGGCTGATGAGCCAGTAAGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSLYLAEPGGLS*QPEADEPVRWW Trigger: CCACCATCTTACTGGCTCATCAGCCTCTGGCTGCCAAGAGAGCCCTCCAGGCTCGGCCAGATATAAACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | TGCGTGAGTGTGTCCAGAAAGGATCAAGTTTATATCTaGCCGAGCCTGGAGGGCTCTCTTGGCAGCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CVSVSRKDQVYI*PSLEGSLGSQR Trigger: CCTCTGGCTGCCAAGAGAGCCCTCCAGGCTCGGCCAGATATAAACTTGATCCTTTCTGGACACACTCACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CAA 90 bp | GTAGGCTGTACCTGGGCTAACATACACAAACGTCGCCTTGCCCACTaGGTAGAGCCCAGCAAAGAAAGGGTTCAGGAGATAGGCTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: VGCTWANIHKRRLAH*VEPSKERVQEIGSD Trigger: GTCGGAGCCTATCTCCTGAACCCTTTCTTTGCTGGGCTCTACCAAGTGGGCAAGGCGACGTTTGTGTATGTTAGCCCAGGTACAGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | CTAGCCTGTTCACCATCCTCACAAACATCTCCATCTTaGTCCTGCCCACTGTGGGCCCCAAGTGAATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LACSPSSQTSPS*SCPLWAPSECQ Trigger: CTGACATTCACTTGGGGCCCACAGTGGGCAGGACCAAGATGGAGATGTTTGTGAGGATGGTGAACAGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CCA 72 bp | CCCCAACCTCATGGGTATCCCATAGTAGGCTGTACCTaGGCTAACATACACAAACGTCGCCTTGCCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: PQPHGYPIVGCT*ANIHKRRLAHL Trigger: CAAGTGGGCAAGGCGACGTTTGTGTATGTTAGCCCAGGTACAGCCTACTATGGGATACCCATGAGGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS CAA 72 bp | ACCTGGGCTAACATACACAAACGTCGCCTTGCCCACTaGGTAGAGCCCAGCAAAGAAAGGGTTCAGGAGATA | + |
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Preference number: 6 (lower is better) Translates to: TWANIHKRRLAH*VEPSKERVQEI Trigger: TATCTCCTGAACCCTTTCTTTGCTGGGCTCTACCAAGTGGGCAAGGCGACGTTTGTGTATGTTAGCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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| CDS GCA 72 bp | GAAATCTTTACATTCTCATTATGTAGGGGCCGGACGTaGAAGGATTCCAGCAGTGTGAACCAGTTGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: EIFTFSLCRGRT*KDSSSVNQLLT Trigger: CGTCAGCAACTGGTTCACACTGCTGGAATCCTTGCACGTCCGGCCCCTACATAATGAGAATGTAAAGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111820.4 |
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