Pregenerated sensors for TMPO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019961Ensembl transcript IDs: ENSMUST00000020123.7, ENSMUST00000072239.14, ENSMUST00000092219.14, ENSMUST00000099355.12, ENSMUST00000105293.11
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATCCTCCCACACACAGAGCAGCAGGGTCTTTCCCTTCTATACATaGACACGCTTGTCTGCGAGCCAAGCAGCAAGTTTGTGCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: ASSHTQSSRVFPFYT*TRLSASQAASLCTG Trigger: GCCAGTGCACAAACTTGCTGCTTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTGTGTGTGGGAGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR GCA 90 bp | TACACTTTCTTAAGTGGCTCTGAACTCAGTCACGTGCACGCCAAGTaGATGCATCCTCCCACACACAGAGCAGCAGGGTCTTTCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: YTFLSGSELSHVHAK*MHPPTHRAAGSFPS Trigger: AGAAGGGAAAGACCCTGCTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAGAGCCACTTAAGAAAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR CCA 90 bp | CTGAGAGGCAAGCACTTGAGATCTAAGTCAGCTCCCCACATGCCCTaGAAGACCAGACCTACATGTTCTGGTCTCAGTGGCAGAAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LRGKHLRSKSAPHMP*KTRPTCSGLSGRSV Trigger: TACACTTCTGCCACTGAGACCAGAACATGTAGGTCTGGTCTTCCAGGGCATGTGGGGAGCTGACTTAGATCTCAAGTGCTTGCCTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR TCA 90 bp | GGAAAGCCAAGCGTACTTAATGGTTTTAATGAAGTAGGACTTCCATaGTATGACAGATACTCTAGCGAGTGGTATGGTAAGGCCGCACCA | + |
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Preference number: 1 (lower is better) Translates to: GKPSVLNGFNEVGLP*YDRYSSEWYGKAAP Trigger: TGGTGCGGCCTTACCATACCACTCGCTAGAGTATCTGTCATATCATGGAAGTCCTACTTCATTAAAACCATTAAGTACGCTTGGCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR TCA 90 bp | AGTATCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTaGACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACA | + |
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Preference number: 1 (lower is better) Translates to: SISRFKLLLHFLKWL*TQSRARQVHASSHT Trigger: TGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR GCA 90 bp | TTACCTAAAGAATATTTTGCTAACAATCTGGATGGATGGGACAAATaGTTTACTGTAAATAAAAAGCACAGGATCCCAATGGGAGCCTTA | + |
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Preference number: 1 (lower is better) Translates to: LPKEYFANNLDGWDK*FTVNKKHRIPMGAL Trigger: TAAGGCTCCCATTGGGATCCTGTGCTTTTTATTTACAGTAAAGCATTTGTCCCATCCATCCAGATTGTTAGCAAAATATTCTTTAGGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR CCA 90 bp | CTCACACATTTACCTAAAGAATATTTTGCTAACAATCTGGATGGATaGGACAAATGCTTTACTGTAAATAAAAAGCACAGGATCCCAATG | + |
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Preference number: 1 (lower is better) Translates to: LTHLPKEYFANNLDG*DKCFTVNKKHRIPM Trigger: CATTGGGATCCTGTGCTTTTTATTTACAGTAAAGCATTTGTCCCATCCATCCAGATTGTTAGCAAAATATTCTTTAGGTAAATGTGTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR GCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGATGCACACGCTTGTCTaGGAGCCAAGCAGCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LNSVTCTPSACILPHTEQMHTLV*EPSSKF Trigger: AAACTTGCTGCTTGGCTCGCAGACAAGCGTGTGCAT...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGTTTCCCTTCTATACATaGACACGCTTGTCTGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: LNSVTCTPSACILPHTEQFPFYT*TRLSAS Trigger: GCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAA...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACCCACTTACCATCCCTTaGTGTGTTCCTCAAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LIVPETVFHSISTARIPYPLTIP*CVPQVW Trigger: CCACACTTGAGGAACACAGCAAGGGATGGTAAGTGG...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR-3UTR GCA 90 bp | ACATGCCCTGGAAGACCAGACCTACATGTTCTGGTCTCAGTGGCAGAAGTGTACCACACAAGAGCTTATTaGTGTACCTTCCATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: TCPGRPDLHVLVSVAEVYHTRAY*CTFHEQ Trigger: TTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTG...GTACACTTCTGCCACTGAGACCAGAACATGTAGGTCTGGTCTTCCAGGGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR TCA 90 bp | GACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCGTGGCCGTTTCTCATACTaGACCTCATTCACATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: DRSHTRAYCCTFHEQTLRGRFSY*TSFTFV Trigger: TACAAATGTGAATGAGGTTCAGTATGAGAAACGGCC...ACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR-3UTR TCA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTCATATGGCACAATGTaGTCTCCAAGGTCCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: HMTGVTQELIAVPSMNKRSYGTM*SPRSKI Trigger: TATTTTGGACCTTGGAGATCACATTGTGCCATATGA...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR-3UTR CCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCTGTGTTCCTCAAGTGTaGTCCATGTACTTGTATAAC | + |
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Preference number: 2 (lower is better) Translates to: YMYILKTSNRAVAMDCAACVPQV*SMYLYN Trigger: GTTATACAAGTACATGGACCACACTTGAGGAACACA...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACTATTATGAGGTTTGTTaGAGTACAAAGGTCACTTGT | + |
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Preference number: 2 (lower is better) Translates to: LIVPETVFHSISTARIPYYYEVC*STKVTC Trigger: ACAAGTGACCTTTGTACTGCAACAAACCTCATAATA...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR-3UTR CCA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTCTTCAGTCAACAAGTaGACACAAATGTTTTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: HMTGVTQELIAVPSMNKRSSVNK*TQMFFY Trigger: GTAGAAAAACATTTGTGTCCACTTGTTGACTGAAGA...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCTGTGGAAAGCCAAGCGTACTTAATGGTTTTAATGAAGTAGGACTTCCATCTTCAGTCAACAAGTaGACACAAATGTTTTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GPCGKPSVLNGFNEVGLPSSVNK*TQMFFY Trigger: GTAGAAAAACATTTGTGTCCACTTGTTGACTGAAGA...TGGAAGTCCTACTTCATTAAAACCATTAAGTACGCTTGGCTTTCCACAGGGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR CCA 90 bp | CGGCCTTACATATATGTGAAGTCTGATTTATACCCCCACACTTTTAAATATCAAGCTGTCACGGTAGGGTaGGAAAGTTGGGTAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: RPYIYVKSDLYPHTFKYQAVTVG*ESWVKH Trigger: ATGTTTTACCCAACTTTCCCACCCTACCGTGACAGC...TTGATATTTAAAAGTGTGGGGGTATAAATCAGACTTCACATATATGTAAGGCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR TCA 90 bp | CTACATGTTCTGGTCTCAGTGGCAGAAGTGTACTTAAAATGTCTACGAAATATCTCATATGGCACAATGTaGTCTCCAAGGTCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LHVLVSVAEVYLKCLRNISYGTM*SPRSKI Trigger: TATTTTGGACCTTGGAGATCACATTGTGCCATATGA...GATATTTCGTAGACATTTTAAGTACACTTCTGCCACTGAGACCAGAACATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR TCA 90 bp | ACCCTCACACATTTACCTAAAGAATATTTTGCTAACAATCTGGATGGATGGGACTCCAAAATATTGAAATaGGATCCGTGTAAGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLTHLPKEYFANNLDGWDSKILK*DPCKHP Trigger: AGGATGCTTACACGGATCTCATTTCAATATTTTGGA...GTCCCATCCATCCAGATTGTTAGCAAAATATTCTTTAGGTAAATGTGTGAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR-3UTR TCA 90 bp | CGGCCTTACATATATGTGAAGTCTGATTTATACCCCCACACTTTTAAATATCAAATGAGAAGCTATGTCTaGAAACAAAGGAAGGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RPYIYVKSDLYPHTFKYQMRSYV*KQRKED Trigger: ATCTTCCTTCCTTTGTTTTCAGACATAGCTTCTCAT...TTGATATTTAAAAGTGTGGGGGTATAAATCAGACTTCACATATATGTAAGGCCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR GCA 72 bp | GTGGCTCTGAACTCAGTCACGTGCACGCCAAGTGCATaGATCCTCCCACACACAGAGCAGCAGGGTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: VALNSVTCTPSA*ILPHTEQQGLS Trigger: GGAAAGACCCTGCTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAGAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR GCA 72 bp | TTAAGTGGCTCTGAACTCAGTCACGTGCACGCCAAGTaGATGCATCCTCCCACACACAGAGCAGCAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LSGSELSHVHAK*MHPPTHRAAGS Trigger: AGACCCTGCTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAGAGCCACTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR GCA 72 bp | CACACACAGAGCAGCAGGGTCTTTCCCTTCTATACATaGACACGCTTGTCTGCGAGCCAAGCAGCAAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: HTQSSRVFPFYT*TRLSASQAASL Trigger: CAAACTTGCTGCTTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR CCA 72 bp | AAGCACTTGAGATCTAAGTCAGCTCCCCACATGCCCTaGAAGACCAGACCTACATGTTCTGGTCTCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: KHLRSKSAPHMP*KTRPTCSGLSG Trigger: GCCACTGAGACCAGAACATGTAGGTCTGGTCTTCCAGGGCATGTGGGGAGCTGACTTAGATCTCAAGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR GCA 72 bp | GCTCCCTCAATTGTACAGCCAGCTAAAGCAGGTATCTaGTTCTCTACAAGGTCCCTGTGGAAAGCCAAGCGT | + |
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Preference number: 3 (lower is better) Translates to: APSIVQPAKAGI*FSTRSLWKAKR Trigger: ACGCTTGGCTTTCCACAGGGACCTTGTAGAGAAGCAGATACCTGCTTTAGCTGGCTGTACAATTGAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR GCA 72 bp | GCACTACCACATGACAGGAGTCACACAAGAGCTTATTaGTGTACCTTCCATGAACAAACGCTGCGTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: ALPHDRSHTRAY*CTFHEQTLRTG Trigger: TCCTGTACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTGGTAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR CCA 72 bp | GAAAACAAAGGAAGGAAGATGGCTGTCACGGTAGGGTaGGAAAGTTGGGTAAAACATGCCCATGTGGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: ENKGRKMAVTVG*ESWVKHAHVAH Trigger: ATGAGCCACATGGGCATGTTTTACCCAACTTTCCCACCCTACCGTGACAGCCATCTTCCTTCCTTTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR CCA 72 bp | CATGAACAAACGCTGCGTACAGGAAGCACAACTGCGTaGCCGTTTCTCATACTGAACCTCATTCACATTTGT | + |
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Preference number: 3 (lower is better) Translates to: HEQTLRTGSTTA*PFLILNLIHIC Trigger: ACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGCAGTTGTGCTTCCTGTACGCAGCGTTTGTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR TCA 72 bp | AGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTaGACTCAGTCACGTGCACGCCAAGTGCATGCATCC | + |
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Preference number: 3 (lower is better) Translates to: RFKLLLHFLKWL*TQSRARQVHAS Trigger: GGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| 3UTR TCA 72 bp | GTACAGGAAGCACAACTGCGTGGCCGTTTCTCATACTaGACCTCATTCACATTTGTAACATTTTTACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: VQEAQLRGRFSY*TSFTFVTFLLS Trigger: GCTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGCAGTTGTGCTTCCTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| 3UTR TCA 72 bp | AGCGTACTTAATGGTTTTAATGAAGTAGGACTTCCATaGTATGACAGATACTCTAGCGAGTGGTATGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SVLNGFNEVGLP*YDRYSSEWYGK Trigger: CTTACCATACCACTCGCTAGAGTATCTGTCATATCATGGAAGTCCTACTTCATTAAAACCATTAAGTACGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| 3UTR GCA 72 bp | CCTTACAACCATACAAATGAAAACAGGGTGATACATTaGTTCATACAGACACAGACATTAGGGTATAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: PYNHTNENRVIH*FIQTQTLGYSK Trigger: TTTACTATACCCTAATGTCTGTGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR TCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGTGCCACACAGGAGCCTaGGTCCCCGCCCCTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LNSVTCTPSACILPHTEQCHTGA*VPAPCW Trigger: CCAGCAAGGGGCGGGGACTCAGGCTCCTGTGTGGCA...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR GCA 90 bp | ACATGCCCTGGAAGACCAGACCTACATGTTCTGGTCTCAGTGGCAGAAGTGTACGCACGTACACGTCCTTaGGCTGCTCGCCGGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: TCPGRPDLHVLVSVAEVYARTRP*AARRPG Trigger: TCCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGC...GTACACTTCTGCCACTGAGACCAGAACATGTAGGTCTGGTCTTCCAGGGCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| CDS-3UTR GCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGCCTGCAGTTCAGTCCTaGCCAAAGGAGGACGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHEPAVQS*PKEDGW Trigger: CCACCCGTCCTCCTTTGGGCAGGACTGAACTGCAGG...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGGTCCCCGCCCCTTGCTaGCTTCTCACTGAGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHEVPAPC*LLTESW Trigger: CCAAGACTCAGTGAGAAGCCAGCAAGGGGCGGGGAC...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR TCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGTCAGCACGCAATGGCTaGGCTCTACTCTTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHESARNG*ALLFPP Trigger: TGGAGGGAAGAGTAGAGCTCAGCCATTGCGTGCTGA...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGACAAGTCTCCCTAGGTaGGTCTCTCTTAGTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LNSVTCTPSACILPHTEQTSLPR*VSLSGL Trigger: CAAACCACTAAGAGAGACCCACCTAGGGAGACTTGT...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGCTGCCGACCCCACCCTaGACTAACAGAGAATTGACA | + |
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Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHELPTPP*TNRELT Trigger: TGTCAATTCTCTGTTAGTCCAGGGTGGGGTCGGCAG...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGATCATGCTGTGGTGGTaGCTTAGACACTTCTACTCC | + |
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Preference number: 4 (lower is better) Translates to: LNSVTCTPSACILPHTEQIMLWW*LRHFYS Trigger: GGAGTAGAAGTGTCTAAGCCACCACCACAGCATGAT...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGCTGAGTAGCTGCTCGTaGGGTGGCTTCAGAAATAAA | + |
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Preference number: 4 (lower is better) Translates to: LNSVTCTPSACILPHTEQLSSCS*GGFRNK Trigger: TTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAG...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR TCA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGGCCGGTTGCGCGCCGTaGGGTGCTGCAGGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: AWPFLILNLIHICNIFTQAGCAP*GAAGRA Trigger: AGCTCTACCTGCAGCACCTCACGGCGCGCAACCGGC...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGCAGGGTCTTTCCCTTCTATACATGCACACGCTTGTCTGCGAGCCAATTCTGTTCAGAATCCTaGGTGCCTGCTGTGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: QSSRVFPFYTCTRLSASQFCSES*VPAVHH Trigger: GTGATGCACAGCAGGCACTCAGGATTCTGAACAGAA...TTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR GCA 90 bp | GCACTACCACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ALPHDRSHTRAYCCTFHELERPA*STFDWS Trigger: AGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAG...TTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTGGTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR TCA 90 bp | CTACATGTTCTGGTCTCAGTGGCAGAAGTGTACTTAAAATGTCTACGAAATATCGCCGGTTGCGCGCCGTaGGGTGCTGCAGGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LHVLVSVAEVYLKCLRNIAGCAP*GAAGRA Trigger: AGCTCTACCTGCAGCACCTCACGGCGCGCAACCGGC...GATATTTCGTAGACATTTTAAGTACACTTCTGCCACTGAGACCAGAACATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| CDS-3UTR TCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGTGCAATCTGCAATGCTaGTGCTGCAGCTTCGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHECNLQC*CCSFVR Trigger: TCTTACGAAGCTGCAGCATCAGCATTGCAGATTGCA...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGCAGGGTCTTTCCCTTCTATACATGCACACGCTTGTCTGCGAGCCAAACTTTCTTAGCTGCCTaGAGTTCAGTCCTGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSRVFPFYTCTRLSASQTFLAA*SSVLPK Trigger: TTTGGGCAGGACTGAACTGCAGGCAGCTAAGAAAGT...TTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGTTGTACTTTCTTAGCTaGCTGCAGTTCAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHELYFLS*LQFSPA Trigger: GGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAA...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTGAACTCAGTCACAGCCGAGCACCGGCGTaGGCTCGCGCTCCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDLNSYYTFLSGSELSHSRAPA*ARAPRR Trigger: GCGACGAGGAGCGCGAGCCCACGCCGGTGCTCGGCT...GTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGCAGGGTCTTTCCCTTCTATACATGCACACGCTTGTCTGCGAGCCAACCAAAGGAGGACGGGTaGAGATTTCAGGGAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSRVFPFYTCTRLSASQPKEDG*RFQGKK Trigger: TTTCTTTCCCTGAAATCTCCACCCGTCCTCCTTTGG...TTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGAATTGCCTGAGCAAGTaGTGGAGAAATGACCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHENCLSK*WRNDLR Trigger: TCGCAGGTCATTTCTCCACCACTTGCTCAGGCAATT...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACGCCGGTTGCGCGCCGTaGGGTGCTGCAGGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNAGCAP*GAAGRA Trigger: AGCTCTACCTGCAGCACCTCACGGCGCGCAACCGGC...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR TCA 90 bp | CTGAACTCAGTCACGTGCACGCCAAGTGCATGCATCCTCCCACACACAGAGCAGTGCATCACTAGGATCTaGATTAATAATCTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSVTCTPSACILPHTEQCITRI*INNLCS Trigger: GCTGCACAGATTATTAATTCAGATCCTAGTGATGCA...CTGCTCTGTGTGTGGGAGGATGCATGCACTTGGCGTGCACGTGACTGAGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACGCACGTACACGTCCTTaGGCTGCTCGCCGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNARTRP*AARRPG Trigger: TCCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGC...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACAGGAAACTGGATATCTaGACGCCACCGAGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYRKLDI*TPPRAA Trigger: AGCTGCCCTCGGTGGCGTGCAGATATCCAGTTTCCT...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCGGAGCGTCACGTTGTTaGCGACCAACTCGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMTGVTQELIAVPSMNKRGASRC*RPTRSS Trigger: TGAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCC...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR TCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTGCCGGTTGCGCGCCGTaGGGTGCTGCAGGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLAGCAP*GAAGRA Trigger: AGCTCTACCTGCAGCACCTCACGGCGCGCAACCGGC...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAGCCGGTTGCGCGCCGTaGGGTGCTGCAGGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTAGCAP*GAAGRA Trigger: AGCTCTACCTGCAGCACCTCACGGCGCGCAACCGGC...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGACGCTGAGAAGATGGTaGAGAACTTTTCTCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: GRADWNHRSCETRHTTHETLRRW*RTFLYT Trigger: TGTGTAGAGAAAAGTTCTTCACCATCTTCTCAGCGT...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TTACCTTACAACCATACAAATGAAAACAGGGTGATACATTGCTTCATACAGACAGCACGTACACGTCCTTaGGCTGCTCGCCGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPYNHTNENRVIHCFIQTARTRP*AARRPG Trigger: TCCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGC...TGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAGCACGTACACGTCCTTaGGCTGCTCGCCGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTARTRP*AARRPG Trigger: TCCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGC...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACCTCGATTCAGTTCCCTaGTCCCTCAGCTTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYLDSVP*SLSFNS Trigger: GCTGTTGAAGCTGAGGGAGCAGGGAACTGAATCGAG...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACGTGTGGGCTGCAATCTaGAATGCTGATGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYVWAAI*NADAAA Trigger: AGCTGCAGCATCAGCATTGCAGATTGCAGCCCACAC...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCTCAGTCCTTCTCTaGTTCAGTGTGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMTGVTQELIAVPSMNKRCSVLL*FSVTGV Trigger: GACGCCAGTCACACTGAAGCAGAGAAGGACTGAGCA...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGCTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWPFLILNLIHICNIFTQLERPA*STFDWS Trigger: AGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAG...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| 3UTR CAA 72 bp | AGGAAGGAAGATGGCTGTCACGGTAGGGTGGGAAAGTaGGGTAAAACATGCCCATGTGGCTCATCTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGCHGRVGK*GKTCPCGSSQK Trigger: TTTTTGAGATGAGCCACATGGGCATGTTTTACCCAACTTTCCCACCCTACCGTGACAGCCATCTTCCTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR TCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCTTGCTGGCTTCTCACTaGGTCTTGGGACTTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YMYILKTSNRAVAMDCAALLASH*VLGLFG Trigger: CCCGAAAAGTCCCAAGACTCAGTGAGAAGCCAGCAA...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACAGCTGCCTATCAATTTaGTGCCACTCCTCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYSCLSI*CHSSST Trigger: GGTGGAAGAGGAGTGGCAGCAAATTGATAGGCAGCT...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | CTACATGTTCTGGTCTCAGTGGCAGAAGTGTACTTAAAATGTCTACGAAATATCCTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHVLVSVAEVYLKCLRNILERPA*STFDWS Trigger: AGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAG...GATATTTCGTAGACATTTTAAGTACACTTCTGCCACTGAGACCAGAACATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR CCA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTATCAGTTTTCTTTGTaGCTTTCCTGCCGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HMTGVTQELIAVPSMNKRYQFSL*LSCRRR Trigger: GCGCCGTCGGCAGGAAAGCCACAAAGAAAACTGATA...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCCAGCAGAGACCAACCTaGCAGCAAATTCACGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YMYILKTSNRAVAMDCAAQQRPT*QQIHAE Trigger: CTCAGCGTGAATTTGCTGCCAGGTTGGTCTCTGCTG...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | GCACTACCACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACTGCCTTGTGTTTTCTaGAGAGGAAGAGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPHDRSHTRAYCCTFHELPCVF*RGRDCW Trigger: CCAACAGTCTCTTCCTCTGCAGAAAACACAAGGCAG...TTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTGGTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACGACCTCTCCGACTCCTaGAGTACTTCTCTTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYDLSDS*STSLSL Trigger: TAGTGAAAGAGAAGTACTGCAGGAGTCGGAGAGGTC...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCTATCAGTTTTCTTTGTaGCTTTCCTGCCGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YMYILKTSNRAVAMDCAAYQFSL*LSCRRR Trigger: GCGCCGTCGGCAGGAAAGCCACAAAGAAAACTGATA...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCCTGCCTTGTGTTTTCTaGAGAGGAAGAGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YMYILKTSNRAVAMDCAALPCVF*RGRDCW Trigger: CCAACAGTCTCTTCCTCTGCAGAAAACACAAGGCAG...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTGTGGAAAGCCAAGCGTACTTAATGGTTTTAATGAAGTAGGACTTCCACTGCCTTGTGTTTTCTaGAGAGGAAGAGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPCGKPSVLNGFNEVGLPLPCVF*RGRDCW Trigger: CCAACAGTCTCTTCCTCTGCAGAAAACACAAGGCAG...TGGAAGTCCTACTTCATTAAAACCATTAAGTACGCTTGGCTTTCCACAGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR GCA 90 bp | AGCGAGGGTTCCACTGATATTCTAGTTGCTGAATTCCTTGTATATCTAAAATGTAAGTCCCAGGCAAACTaGCGACCCCACCCTGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: SEGSTDILVAEFLVYLKCKSQAN*RPHPGL Trigger: TAGTCCAGGGTGGGGTCGGCAGTTTGCCTGGGACTT...ACATTTTAGATATACAAGGAATTCAGCAACTAGAATATCAGTGGAACCCTCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGTGCTCAGTCCTTCTCTaGTTCAGTGTGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWPFLILNLIHICNIFTQCSVLL*FSVTGV Trigger: GACGCCAGTCACACTGAAGCAGAGAAGGACTGAGCA...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACACTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTLERPA*STFDWS Trigger: AGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAG...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACTCTCATATAGCTTCCTaGTTGTTCCCACAATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYSHIAS*LFPQWD Trigger: GTCCCATTGTGGGAACAACCAGGAAGCTATATGAGA...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACTTTCTACATCCAGTGTaGGCACAGAATCAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIVPETVFHSISTARIPYFLHPV*AQNQKS Trigger: GGACTTCTGATTCTGTGCCCACACTGGATGTAGAAA...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| 3UTR CAA 72 bp | GAAGATGAGGTATACCAGAACTCCACTTACCATCCCTaGCTGTGTTCCTCAAGTGTGGTCCATGTACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDEVYQNSTYHP*LCSSSVVHVLV Trigger: TACAAGTACATGGACCACACTTGAGGAACACAGCAAGGGATGGTAAGTGGAGTTCTGGTATACCTCATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | GACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCGTTATACGAAAATGCTGTaGAGTTTCCACCCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRSHTRAYCCTFHEQTLRYTKML*SFHPFP Trigger: AGGAAAAGGGTGGAAACTTCACAGCATTTTCGTATA...ACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR TCA 90 bp | GACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCGTCCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: DRSHTRAYCCTFHEQTLRPYLTS*SRSSSL Trigger: TAATGAAGAACTTCTGGATCAGCTTGTAAGATATGG...ACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCACCAGAGGGAGTAGATaGAAGTTCAGAAAAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YMYILKTSNRAVAMDCAATRGSR*KFRKRN Trigger: GTTCCTTTTTCTGAACTTGCATCTACTCCCTCTGGT...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTGCTCAGTCCTTCTCTaGTTCAGTGTGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNCSVLL*FSVTGV Trigger: GACGCCAGTCACACTGAAGCAGAGAAGGACTGAGCA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTGGAGCGTCACGTTGTTaGCGACCAACTCGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLGASRC*RPTRSS Trigger: TGAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCC...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | CGGCCTTACATATATGTGAAGTCTGATTTATACCCCCACACTTTTAAATATCAAGGAGCGTCACGTTGTTaGCGACCAACTCGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPYIYVKSDLYPHTFKYQGASRC*RPTRSS Trigger: TGAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCC...TTGATATTTAAAAGTGTGGGGGTATAAATCAGACTTCACATATATGTAAGGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR CCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAGGAGCGTCACGTTGTTaGCGACCAACTCGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTGASRC*RPTRSS Trigger: TGAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCC...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTGAACTCAGTCACCTCCTCAGCACGCAATaGCTGAGCTCTACTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDLNSYYTFLSGSELSHLLSTQ*LSSTLP Trigger: GGGAAGAGTAGAGCTCAGCCATTGCGTGCTGAGGAG...GTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTGCTACGAAGGCCGTGTaGGCTGCAATCTGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLATKAV*AAICNA Trigger: AGCATTGCAGATTGCAGCCCACACGGCCTTCGTAGC...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGTTCCAGTCAACCTATTaGCCACCTGATTGTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWPFLILNLIHICNIFTQFQSTY*PPDCAQ Trigger: CTGAGCACAATCAGGTGGCCAATAGGTTGACTGGAA...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099355.12 |
||
| CDS-3UTR GCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACATGCTCAGTCCTTCTCTaGTTCAGTGTGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTCSVLL*FSVTGV Trigger: GACGCCAGTCACACTGAAGCAGAGAAGGACTGAGCA...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTATCAGTTTTCTTTGTaGCTTTCCTGCCGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNYQFSL*LSCRRR Trigger: GCGCCGTCGGCAGGAAAGCCACAAAGAAAACTGATA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR TCA 90 bp | GGTCCCTGTGGAAAGCCAAGCGTACTTAATGGTTTTAATGAAGTAGGACTTCCACCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GPCGKPSVLNGFNEVGLPPYLTS*SRSSSL Trigger: TAATGAAGAACTTCTGGATCAGCTTGTAAGATATGG...TGGAAGTCCTACTTCATTAAAACCATTAAGTACGCTTGGCTTTCCACAGGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACCTGCCTTGTGTTTTCTaGAGAGGAAGAGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNLPCVF*RGRDCW Trigger: CCAACAGTCTCTTCCTCTGCAGAAAACACAAGGCAG...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | CCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGCAGAGACTGCCTTGTGTTTTCTaGAGAGGAAGAGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLILNLIHICNIFTQQRLPCVF*RGRDCW Trigger: CCAACAGTCTCTTCCTCTGCAGAAAACACAAGGCAG...TCTCTGCTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR GCA 90 bp | AGCGAGGGTTCCACTGATATTCTAGTTGCTGAATTCCTTGTATATCTAAAATGTTGCCTATCAATTTGCTaGCACTCCTCTTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SEGSTDILVAEFLVYLKCCLSIC*HSSSTT Trigger: AGTGGTGGAAGAGGAGTGGCAGCAAATTGATAGGCA...ACATTTTAGATATACAAGGAATTCAGCAACTAGAATATCAGTGGAACCCTCGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTGAACTCAGTCACGTTCAGAATCCTGAGTaGCTGCTGTGCATCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDLNSYYTFLSGSELSHVQNPE*LLCITR Trigger: CCTAGTGATGCACAGCAGGCACTCAGGATTCTGAAC...GTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACATATCAGTTTTCTTTGTaGCTTTCCTGCCGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTYQFSL*LSCRRR Trigger: GCGCCGTCGGCAGGAAAGCCACAAAGAAAACTGATA...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTCAAAACTGTGTGCTGGTCTAAATATTCATATTCGGCTTCCTCCTTTGTCTCATATAGCTTCCTaGTTGTTCCCACAATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKLCAGLNIHIRLPPLSHIAS*LFPQWD Trigger: GTCCCATTGTGGGAACAACCAGGAAGCTATATGAGA...CAAAGGAGGAAGCCGAATATGAATATTTAGACCAGCACACAGTTTTGACTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR CCA 90 bp | AATGTTAAGTCAAAACTGTGTGCTGGTCTAAATATTCATATTCGGCTTCCTCCTTTCCACCCTTTTCCTTaGAGTTCTTCTCGACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVKSKLCAGLNIHIRLPPFHPFP*SSSRPS Trigger: AGAGGGTCGAGAAGAACTCCAAGGAAAAGGGTGGAA...AGGAGGAAGCCGAATATGAATATTTAGACCAGCACACAGTTTTGACTTAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR TCA 90 bp | AGCGAGGGTTCCACTGATATTCTAGTTGCTGAATTCCTTGTATATCTAAAATGTATAATCTGTGCAGCCTaGCTTATGTCAGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEGSTDILVAEFLVYLKCIICAA*LMSACR Trigger: TCTGCAAGCTGACATAAGTCAGGCTGCACAGATTAT...ACATTTTAGATATACAAGGAATTCAGCAACTAGAATATCAGTGGAACCCTCGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTCTCATATAGCTTCCTaGTTGTTCCCACAATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNSHIAS*LFPQWD Trigger: GTCCCATTGTGGGAACAACCAGGAAGCTATATGAGA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTTCCAGTCAACCTATTaGCCACTAAGGATTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNFQSTY*PLRIRC Trigger: GCAACGAATCCTTAGTGGCCAATAGGTTGACTGGAA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 |
||
| CDS-3UTR TCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTGCAGCAAATTCACGCTaGGAAGATGGTGAAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLAANSR*EDGEEL Trigger: AAGTTCTTCACCATCTTCTCAGCGTGAATTTGCTGC...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR GCA 90 bp | TTACCTTACAACCATACAAATGAAAACAGGGTGATACATTGCTTCATACAGACAGACATAATCTCGAATTaGCTGAGCAAGTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPYNHTNENRVIHCFIQTDIISN*LSKWWR Trigger: TCTCCACCACTTGCTCAGGCAATTCGAGATTATGTC...TGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACATCTCATATAGCTTCCTaGTTGTTCCCACAATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTSHIAS*LFPQWD Trigger: GTCCCATTGTGGGAACAACCAGGAAGCTATATGAGA...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACATTCCAGTCAACCTATTaGCCACTAAGGATTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTFQSTY*PLRIRC Trigger: GCAACGAATCCTTAGTGGCCAATAGGTTGACTGGAA...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 |
||
| 3UTR CAA 72 bp | TGTGGTCCATGTACTTGTATAACTAGGAATTGTTTGTaGGCTACCTCCTCTATCAGACATAAAACTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: CGPCTCITRNCL*ATSSIRHKTVH Trigger: GTGTACAGTTTTATGTCTGATAGAGGAGGTAGCCAACAAACAATTCCTAGTTATACAAGTACATGGACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTATACGAAAATGCTGTaGAGTTTCCACCTGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNYTKML*SFHLIV Trigger: CACAATCAGGTGGAAACTTCACAGCATTTTCGTATA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092219.14 |
||
| CDS-3UTR CCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTTTTATCATGCTGTGGTaGTGGCTTAGACACTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLFIMLW*WLRHFY Trigger: GTAGAAGTGTCTAAGCCACCACCACAGCATGATAAA...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CCA 90 bp | TTACCTTACAACCATACAAATGAAAACAGGGTGATACATTGCTTCATACAGACATTTAGGATAGATTCGTaGAGAGGAAAAGACGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPYNHTNENRVIHCFIQTFRIDS*RGKDGS Trigger: AGAGCCGTCTTTTCCTCTCCACGAATCTATCCTAAA...TGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| 3UTR CAA 72 bp | AAGTGTGGTCCATGTACTTGTATAACTAGGAATTGTTaGTTGGCTACCTCCTCTATCAGACATAAAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KCGPCTCITRNC*LATSSIRHKTV Trigger: TACAGTTTTATGTCTGATAGAGGAGGTAGCCAACAAACAATTCCTAGTTATACAAGTACATGGACCACACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | CCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGCAGAGACCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PFLILNLIHICNIFTQQRPYLTS*SRSSSL Trigger: TAATGAAGAACTTCTGGATCAGCTTGTAAGATATGG...TCTCTGCTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTGAACTCAGTCACGGACTAACAGAGAATTaGCATAATCTCGAATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLDLNSYYTFLSGSELSHGLTEN*HNLELP Trigger: AGGCAATTCGAGATTATGTCAATTCTCTGTTAGTCC...GTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | TTACCTTACAACCATACAAATGAAAACAGGGTGATACATTGCTTCATACAGACAAAAGTAGTCAGAGAATaGGAGACAACACTTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPYNHTNENRVIHCFIQTKVVRE*ETTLLA Trigger: TGCCAAAAGTGTTGTCTCTCATTCTCTGACTACTTT...TGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTCCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLPYLTS*SRSSSL Trigger: TAATGAAGAACTTCTGGATCAGCTTGTAAGATATGG...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR TCA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACACCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTPYLTS*SRSSSL Trigger: TAATGAAGAACTTCTGGATCAGCTTGTAAGATATGG...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CCA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTGAGAGACAACACTTTTaGCAAAAGAAGACCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETKVLERFTNSLSQSFCLERQHF*QKKTYV Trigger: AACATAGGTCTTCTTTTGCCAAAAGTGTTGTCTCTC...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| 3UTR CAA 72 bp | TTTGTAGTGTCTTGTTTATCTAACAAAATAGCCATGTaGAGTGAAGATGAGGTATACCAGAACTCCACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FVVSCLSNKIAM*SEDEVYQNSTY Trigger: GTAAGTGGAGTTCTGGTATACCTCATCTTCACTCAACATGGCTATTTTGTTAGATAAACAAGACACTACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| 3UTR CAA 72 bp | CTACCTCCTCTATCAGACATAAAACTGTACACTGCCTaGTCTATTCGATTATTAAAAATGTGCATAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPLSDIKLYTA*SIRLLKMCINV Trigger: CACATTTATGCACATTTTTAATAATCGAATAGACAAGGCAGTGTACAGTTTTATGTCTGATAGAGGAGGTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | GAACGACTCTTCCATCCTGAAGTCACTGAGCTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCTGCGGCAGCTAGCACTGATTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ERLFHPEVTELERPA*STFDWSAAASTDSR Trigger: ACGGGAATCAGTGCTAGCTGCCGCAGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAGCTCAGTGACTTCAGGATGGAAGAGTCGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGCAGGGTCTTTCCCTTCTATACATGCACACGCTTGTCTGCGAGCCAAGGGAGCGTCACGTTGTaGGCGACCAACTCGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSRVFPFYTCTRLSASQGSVTL*ATNSLF Trigger: GAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCCC...TTGGCTCGCAGACAAGCGTGTGCATGTATAGAAGGGAAAGACCCTGCTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 90 bp | CTGCCCCTTCCCGGGCAAGGCCGTATCAGTACAAGTCTCCCTAGGTaGGTCTCTCTTAGTGGTTTGTACTTTCTTAGCTGCCTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPGQGRISTSLPR*VSLSGLYFLSCLQF Trigger: GAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGAGACTTGTACTGATACGGCCTTGCCCGGGAAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | TCCCTAGGTGGGTCTCTCTTAGTGGTTTGTACTTTCTTAGCTGCCTaGAGTTCAGTCCTGCCCAAAGGAGGACGGGTGGAGATTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGGSLLVVCTFLAA*SSVLPKGGRVEISG Trigger: CCCTGAAATCTCCACCCGTCCTCCTTTGGGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | GTACTGATAATATCCGTGCTGCCTCGATGGAGGAAACTGGATATCTaGACGCCACCGAGGGCAGCTGCCTATCAATTTGCTGCCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLIISVLPRWRKLDI*TPPRAAAYQFAATP Trigger: AGGAGTGGCAGCAAATTGATAGGCAGCTGCCCTCGGTGGCGTGCAGATATCCAGTTTCCTCCATCGAGGCAGCACGGATATTATCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | AGTCTCCCTAGGTGGGTCTCTCTTAGTGGTTTGTACTTTCTTAGCTaGCTGCAGTTCAGTCCTGCCCAAAGGAGGACGGGTGGAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRWVSLSGLYFLS*LQFSPAQRRTGGDF Trigger: GAAATCTCCACCCGTCCTCCTTTGGGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | ACTGGATATCTGCACGCCACCGAGGGCAGCTGCCTATCAATTTGCTaGCACTCCTCTTCCACCACTTTTAGGATAGATTCGTGGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGYLHATEGSCLSIC*HSSSTTFRIDSWRG Trigger: TCCTCTCCACGAATCTATCCTAAAAGTGGTGGAAGAGGAGTGGCAGCAAATTGATAGGCAGCTGCCCTCGGTGGCGTGCAGATATCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | GAAACTGGATATCTGCACGCCACCGAGGGCAGCTGCCTATCAATTTaGTGCCACTCCTCTTCCACCACTTTTAGGATAGATTCGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETGYLHATEGSCLSI*CHSSSTTFRIDSWR Trigger: TCTCCACGAATCTATCCTAAAAGTGGTGGAAGAGGAGTGGCAGCAAATTGATAGGCAGCTGCCCTCGGTGGCGTGCAGATATCCAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTGCACGTACACGTCCTaGCGCTGCTCGCCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNCTYTS*RCSPAG Trigger: CCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGCA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | CCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGCAGAGATGCACGTACACGTCCTaGCGCTGCTCGCCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFLILNLIHICNIFTQQRCTYTS*RCSPAG Trigger: CCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGCA...TCTCTGCTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGCAGACTGGAATCACAGGAGCTGTGAGACTCGACATACTACACACGAGCAGGGATTCAGAATCTaGATAGCTGGACTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRADWNHRSCETRHTTHEQGFRI*IAGLAK Trigger: CTTAGCCAGTCCAGCTATCAAGATTCTGAATCCCTG...CTCGTGTGTAGTATGTCGAGTCTCACAGCTCCTGTGATTCCAGTCTGCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 90 bp | TTTCATCATCCACTTTTGGTACTGATAATATCCGTGCTGCCTCGATaGAGGAAACTGGATATCTGCACGCCACCGAGGGCAGCTGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FHHPLLVLIISVLPR*RKLDICTPPRAAAY Trigger: ATAGGCAGCTGCCCTCGGTGGCGTGCAGATATCCAGTTTCCTCCATCGAGGCAGCACGGATATTATCAGTACCAAAAGTGGATGATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | TTACCTTACAACCATACAAATGAAAACAGGGTGATACATTGCTTCATACAGACATGCACGTACACGTCCTaGCGCTGCTCGCCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPYNHTNENRVIHCFIQTCTYTS*RCSPAG Trigger: CCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGCA...TGTCTGTATGAAGCAATGTATCACCCTGTTTTCATTTGTATGGTTGTAAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACATGCACGTACACGTCCTaGCGCTGCTCGCCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTCTYTS*RCSPAG Trigger: CCCGGCCGGCGAGCAGCGCAAGGACGTGTACGTGCA...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS TCA 90 bp | AGAGCTAAGTCCAAATGTTTATCACAAGACTCAGTGGAGGACGCCTaGGTAGCTGCTCGTGGGGTGGCTTCAGAAATAAACCCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RAKSKCLSQDSVEDA*VAARGVASEINPRI Trigger: AATCCTGGGGTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGTGATAAACATTTGGACTTAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS TCA 90 bp | GCCTGCTGTGCATCACTAGGATCTGAATTAATAATCTGTGCAGCCTaGCTTATGTCAGCTTGCAGAGACTTAGCTACGAAGGCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACCASLGSELIICAA*LMSACRDLATKAVW Trigger: CCACACGGCCTTCGTAGCTAAGTCTCTGCAAGCTGACATAAGTCAGGCTGCACAGATTATTAATTCAGATCCTAGTGATGCACAGCAGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 90 bp | GTCCAAATGTTTATCACAAGACTCAGTGGAGGACGCCTGAGTAGCTaGTCGTGGGGTGGCTTCAGAAATAAACCCCAGGATTTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: VQMFITRLSGGRLSS*SWGGFRNKPQDFII Trigger: GATGATGAAATCCTGGGGTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGTGATAAACATTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGGGGAGCGTCACGTTGTaGGCGACCAACTCGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AWPFLILNLIHICNIFTQGSVTL*ATNSLF Trigger: GAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCCC...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | GACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCGTGCTTATCAGTTTTCTTaGTGGCTTTCCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: DRSHTRAYCCTFHEQTLRAYQFS*WLSCRR Trigger: CCGTCGGCAGGAAAGCCACAAAGAAAACTGATAAGC...ACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | GACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCTGCGTCATATAGCTTCCTGGTaGTTCCCACAATGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRSHTRAYCCTFHEQTLRHIASW*FPQWDQ Trigger: CTGGTCCCATTGTGGGAACAACCAGGAAGCTATATG...ACGCAGCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS CCA 90 bp | ATGTTTATCACAAGACTCAGTGGAGGACGCCTGAGTAGCTGCTCGTaGGGTGGCTTCAGAAATAAACCCCAGGATTTCATCATCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MFITRLSGGRLSSCS*GGFRNKPQDFIIHF Trigger: AAAGTGGATGATGAAATCCTGGGGTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGTGATAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | TTGATTGTGCCTGAGACTGTTTTCCACAGCATCTCGACAGCTAGGATTCCTTACAACTCGCTCTTCAACTaGTCTTTGGTCAGGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LIVPETVFHSISTARIPYNSLFN*SLVRTE Trigger: TTCGGTCCTGACCAAAGACAAGTTGAAGAGCGAGTT...GTAAGGAATCCTAGCTGTCGAGATGCTGTGGAAAACAGTCTCAGGCACAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | GCACTACCACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAAAACTCGCTCTTCAACTaGTCTTTGGTCAGGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALPHDRSHTRAYCCTFHENSLFN*SLVRTE Trigger: TTCGGTCCTGACCAAAGACAAGTTGAAGAGCGAGTT...TTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTGGTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | CACATGACAGGAGTCACACAAGAGCTTATTGCTGTACCTTCCATGAACAAACGCAACTCGCTCTTCAACTaGTCTTTGGTCAGGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HMTGVTQELIAVPSMNKRNSLFN*SLVRTE Trigger: TTCGGTCCTGACCAAAGACAAGTTGAAGAGCGAGTT...GCGTTTGTTCATGGAAGGTACAGCAATAAGCTCTTGTGTGACTCCTGTCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS-3UTR CAA 90 bp | AATGTTAAGTCAAAACTGTGTGCTGGTCTAAATATTCATATTCGGCTTCCTCCTGGGAGCGTCACGTTGTaGGCGACCAACTCGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVKSKLCAGLNIHIRLPPGSVTL*ATNSLF Trigger: GAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCCC...AGGAGGAAGCCGAATATGAATATTTAGACCAGCACACAGTTTTGACTTAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR CAA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCGCTTATCAGTTTTCTTaGTGGCTTTCCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: YMYILKTSNRAVAMDCAAAYQFS*WLSCRR Trigger: CCGTCGGCAGGAAAGCCACAAAGAAAACTGATAAGC...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS TCA 90 bp | GGTTCTGTTCAGAATCCTGAGTGCCTGCTGTGCATCACTAGGATCTaGATTAATAATCTGTGCAGCCTGACTTATGTCAGCTTGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSVQNPECLLCITRI*INNLCSLTYVSLQR Trigger: TCTCTGCAAGCTGACATAAGTCAGGCTGCACAGATTATTAATTCAGATCCTAGTGATGCACAGCAGGCACTCAGGATTCTGAACAGAACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 90 bp | TGGTTTCTCTTATCAGTGAAGGAGAAGCTGCAGCAGAGACCAACCTaGCAGCAAATTCACGCTGAGAAGATGGTGAAGAACTTTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: WFLLSVKEKLQQRPT*QQIHAEKMVKNFSL Trigger: TAGAGAAAAGTTCTTCACCATCTTCTCAGCGTGAATTTGCTGCCAGGTTGGTCTCTGCTGCAGCTTCTCCTTCACTGATAAGAGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAGGGAGCGTCACGTTGTaGGCGACCAACTCGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTGSVTL*ATNSLF Trigger: GAAGAGCGAGTTGGTCGCCAACAACGTGACGCTCCC...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | GTTAAGTCAAAACTGTGTGCTGGTCTAAATATTCATATTCGGCTTCCTCCTTTGGCTTATCAGTTTTCTTaGTGGCTTTCCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: VKSKLCAGLNIHIRLPPLAYQFS*WLSCRR Trigger: CCGTCGGCAGGAAAGCCACAAAGAAAACTGATAAGC...CAAAGGAGGAAGCCGAATATGAATATTTAGACCAGCACACAGTTTTGACTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
||
| CDS-3UTR CAA 90 bp | ACCCTCACACATTTACCTAAAGAATATTTTGCTAACAATCTGGATGGATGGGACCATATAGCTTCCTGGTaGTTCCCACAATGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLTHLPKEYFANNLDGWDHIASW*FPQWDQ Trigger: CTGGTCCCATTGTGGGAACAACCAGGAAGCTATATG...GTCCCATCCATCCAGATTGTTAGCAAAATATTCTTTAGGTAAATGTGTGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| CDS-3UTR CAA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCTTCTTTCCTTCATCATaGTCGCTGTATCTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YMYILKTSNRAVAMDCAAFFPSS*SLYLSE Trigger: CTCTGACAGATACAGCGACAATGATGAAGGAAAGAA...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS CCA 90 bp | TGTTCCACCTTTAAAGGGGGCAACAGTCAATTTATTCTTAGAAGCTaGACTAATCTTACAATCCTTCAACCACAGATAACGCCGACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSTFKGGNSQFILRS*TNLTILQPQITPTH Trigger: ATGGGTCGGCGTTATCTGTGGTTGAAGGATTGTAAGATTAGTCCAGCTTCTAAGAATAAATTGACTGTTGCCCCCTTTAAAGGTGGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CAA 90 bp | CTACATGTTCTGGTCTCAGTGGCAGAAGTGTACTTAAAATGTCTACGAAATATCAACTCGCTCTTCAACTaGTCTTTGGTCAGGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHVLVSVAEVYLKCLRNINSLFN*SLVRTE Trigger: TTCGGTCCTGACCAAAGACAAGTTGAAGAGCGAGTT...GATATTTCGTAGACATTTTAAGTACACTTCTGCCACTGAGACCAGAACATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| CDS-3UTR CAA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACGCTTATCAGTTTTCTTaGTGGCTTTCCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNAYQFS*WLSCRR Trigger: CCGTCGGCAGGAAAGCCACAAAGAAAACTGATAAGC...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACCATATAGCTTCCTGGTaGTTCCCACAATGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNHIASW*FPQWDQ Trigger: CTGGTCCCATTGTGGGAACAACCAGGAAGCTATATG...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | CCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGCAGAGACATATAGCTTCCTGGTaGTTCCCACAATGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFLILNLIHICNIFTQQRHIASW*FPQWDQ Trigger: CTGGTCCCATTGTGGGAACAACCAGGAAGCTATATG...TCTCTGCTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072239.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | GAGACTAAAGTCTTAGAAAGGTTCACAAATTCTCTAAGTCAAAGTTTCTGCCTTCAGCTGCCTATCAATTaGCTGCCACTCCTCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETKVLERFTNSLSQSFCLQLPIN*LPLLFH Trigger: GTGGAAGAGGAGTGGCAGCAAATTGATAGGCAGCTG...AAGGCAGAAACTTTGACTTAGAGAATTTGTGAACCTTTCTAAGACTTTAGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS-3UTR CAA 90 bp | GCGTGGCCGTTTCTCATACTGAACCTCATTCACATTTGTAACATTTTTACTCAGTTTCCAGTCAACCTATaGGCCACTAAGGATTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWPFLILNLIHICNIFTQFPVNL*ATKDSL Trigger: CAACGAATCCTTAGTGGCCAATAGGTTGACTGGAAA...CTGAGTAAAAATGTTACAAATGTGAATGAGGTTCAGTATGAGAAACGGCCACGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072239.14 |
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| CDS-3UTR CAA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAGCTTATCAGTTTTCTTaGTGGCTTTCCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTAYQFS*WLSCRR Trigger: CCGTCGGCAGGAAAGCCACAAAGAAAACTGATAAGC...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | TCTCTAGATTTAAACTCTTATTACACTTTCTTAAGTGGCTCTGAACTCAGTCACCATATAGCTTCCTGGTaGTTCCCACAATGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLDLNSYYTFLSGSELSHHIASW*FPQWDQ Trigger: CTGGTCCCATTGTGGGAACAACCAGGAAGCTATATG...GTGACTGAGTTCAGAGCCACTTAAGAAAGTGTAATAAGAGTTTAAATCTAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | TACATGTACATTTTAAAGACAAGTAACAGGGCTGTAGCGATGGACTGTGCAGCCTTTCATCATCCACTTTaGGTACTGATAATATCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: YMYILKTSNRAVAMDCAAFHHPL*VLIISV Trigger: CACGGATATTATCAGTACCAAAAGTGGATGATGAAA...GGCTGCACAGTCCATCGCTACAGCCCTGTTACTTGTCTTTAAAATGTACATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS-3UTR CAA 90 bp | ACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACAAGTGGACAAACTCGCTCTTCAACTaGTCTTTGGTCAGGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: TNFTEVKSQFSSSVNKWTNSLFN*SLVRTE Trigger: TTCGGTCCTGACCAAAGACAAGTTGAAGAGCGAGTT...TGTCCACTTGTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS-3UTR CAA 90 bp | CAATGCAGCACTAACTTTACTGAGGTGAAATCACAATTTAGTTCTTCAGTCAACTTTCCAGTCAACCTATaGGCCACTAAGGATTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCSTNFTEVKSQFSSSVNFPVNL*ATKDSL Trigger: CAACGAATCCTTAGTGGCCAATAGGTTGACTGGAAA...GTTGACTGAAGAACTAAATTGTGATTTCACCTCAGTAAAGTTAGTGCTGCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 |
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| CDS-3UTR CAA 90 bp | AGCGAGGGTTCCACTGATATTCTAGTTGCTGAATTCCTTGTATATCTAAAATGTCGCTTTTTAATAACTTaGTGTACTTCCCCTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEGSTDILVAEFLVYLKCRFLIT*CTSPPN Trigger: ATTTGGAGGGGAAGTACACAAAGTTATTAAAAAGCG...ACATTTTAGATATACAAGGAATTCAGCAACTAGAATATCAGTGGAACCCTCGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 72 bp | TTCCATCCTGAAGTCACTGAGCTCGAGCGGCCGGCCTaGAGCACCTTTGATTGGTCTGCGGCAGCTAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: FHPEVTELERPA*STFDWSAAAST Trigger: AGTGCTAGCTGCCGCAGACCAATCAAAGGTGCTGCAGGCCGGCCGCTCGAGCTCAGTGACTTCAGGATGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
||
| CDS GCA 72 bp | GGGTCTCTCTTAGTGGTTTGTACTTTCTTAGCTGCCTaGAGTTCAGTCCTGCCCAAAGGAGGACGGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSLLVVCTFLAA*SSVLPKGGRVE Trigger: CTCCACCCGTCCTCCTTTGGGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 72 bp | ATATCCGTGCTGCCTCGATGGAGGAAACTGGATATCTaGACGCCACCGAGGGCAGCTGCCTATCAATTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISVLPRWRKLDI*TPPRAAAYQFA Trigger: AGCAAATTGATAGGCAGCTGCCCTCGGTGGCGTGCAGATATCCAGTTTCCTCCATCGAGGCAGCACGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 72 bp | ATGTCAGCTTGCAGAGACTTAGCTACGAAGGCCGTGTaGGCTGCAATCTGCAATGCTGATGCTGCAGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: MSACRDLATKAV*AAICNADAAAS Trigger: CGAAGCTGCAGCATCAGCATTGCAGATTGCAGCCCACACGGCCTTCGTAGCTAAGTCTCTGCAAGCTGACAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 72 bp | CCCGGGCAAGGCCGTATCAGTACAAGTCTCCCTAGGTaGGTCTCTCTTAGTGGTTTGTACTTTCTTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGQGRISTSLPR*VSLSGLYFLSC Trigger: GCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGAGACTTGTACTGATACGGCCTTGCCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 72 bp | CCACTTTTGGTACTGATAATATCCGTGCTGCCTCGATaGAGGAAACTGGATATCTGCACGCCACCGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLLVLIISVLPR*RKLDICTPPRA Trigger: TGCCCTCGGTGGCGTGCAGATATCCAGTTTCCTCCATCGAGGCAGCACGGATATTATCAGTACCAAAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 72 bp | ACAAGACTCAGTGGAGGACGCCTGAGTAGCTGCTCGTaGGGTGGCTTCAGAAATAAACCCCAGGATTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TRLSGGRLSSCS*GGFRNKPQDFI Trigger: GATGAAATCCTGGGGTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CAA 90 bp | GGCCGTATCAGTACAAGTCTCCCTAGGTGGGTCTCTCTTAGTGGTTaGTACTTTCTTAGCTGCCTGCAGTTCAGTCCTGCCCAAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRISTSLPRWVSLSG*YFLSCLQFSPAQRR Trigger: CCTCCTTTGGGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGAGACTTGTACTGATACGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS TCA 72 bp | GCAAACTGCCGACCCCACCCTGGACTAACAGAGAATTaGCATAATCTCGAATTGCCTGAGCAAGTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ANCRPHPGLTEN*HNLELPEQVVE Trigger: CTCCACCACTTGCTCAGGCAATTCGAGATTATGTCAATTCTCTGTTAGTCCAGGGTGGGGTCGGCAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS GCA 72 bp | TTTATCACAAGACTCAGTGGAGGACGCCTGAGTAGCTaGTCGTGGGGTGGCTTCAGAAATAAACCCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FITRLSGGRLSS*SWGGFRNKPQD Trigger: ATCCTGGGGTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGTGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
||
| CDS CCA 72 bp | AGAATTGACATAATCTCGAATTGCCTGAGCAAGTGGTaGAGAAATGACCTGCGACCTCTCCGACTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RIDIISNCLSKW*RNDLRPLRLLQ Trigger: CTGCAGGAGTCGGAGAGGTCGCAGGTCATTTCTCCACCACTTGCTCAGGCAATTCGAGATTATGTCAATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS CCA 72 bp | CAGAGAATTGACATAATCTCGAATTGCCTGAGCAAGTaGTGGAGAAATGACCTGCGACCTCTCCGACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QRIDIISNCLSK*WRNDLRPLRLL Trigger: CAGGAGTCGGAGAGGTCGCAGGTCATTTCTCCACCACTTGCTCAGGCAATTCGAGATTATGTCAATTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS CAA 72 bp | AGTACAAGTCTCCCTAGGTGGGTCTCTCTTAGTGGTTaGTACTTTCTTAGCTGCCTGCAGTTCAGTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: STSLPRWVSLSG*YFLSCLQFSPA Trigger: GGCAGGACTGAACTGCAGGCAGCTAAGAAAGTACAAACCACTAAGAGAGACCCACCTAGGGAGACTTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS TCA 72 bp | TCCAAATGTTTATCACAAGACTCAGTGGAGGACGCCTaGGTAGCTGCTCGTGGGGTGGCTTCAGAAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: SKCLSQDSVEDA*VAARGVASEIN Trigger: GTTTATTTCTGAAGCCACCCCACGAGCAGCTACTCAGGCGTCCTCCACTGAGTCTTGTGATAAACATTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS GCA 72 bp | GTTGGAAGAGGAGTAGAGGATCTCGATTCAGTTCCCTaGTCCCTCAGCTTCAACAGCTTCTTCTCATATAGC | + |
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Preference number: 6 (lower is better) Translates to: VGRGVEDLDSVP*SLSFNSFFSYS Trigger: GCTATATGAGAAGAAGCTGTTGAAGCTGAGGGAGCAGGGAACTGAATCGAGATCCTCTACTCCTCTTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020123.7 ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS CCA 72 bp | TTATCAGTGAAGGAGAAGCTGCAGCAGAGACCAACCTaGCAGCAAATTCACGCTGAGAAGATGGTGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LSVKEKLQQRPT*QQIHAEKMVKN Trigger: GTTCTTCACCATCTTCTCAGCGTGAATTTGCTGCCAGGTTGGTCTCTGCTGCAGCTTCTCCTTCACTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS TCA 72 bp | CAGAATCCTGAGTGCCTGCTGTGCATCACTAGGATCTaGATTAATAATCTGTGCAGCCTGACTTATGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QNPECLLCITRI*INNLCSLTYVS Trigger: GCTGACATAAGTCAGGCTGCACAGATTATTAATTCAGATCCTAGTGATGCACAGCAGGCACTCAGGATTCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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| CDS TCA 72 bp | ACAATGGGACCAGGATTCACTCCATATCTTACAAGCTaGTCCAGAAGTTCTTCATTAGAGAGCTCTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: TMGPGFTPYLTS*SRSSSLESSVT Trigger: TGTGACAGAGCTCTCTAATGAAGAACTTCTGGATCAGCTTGTAAGATATGGAGTGAATCCTGGTCCCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020123.7 ENSMUST00000072239.14 ENSMUST00000092219.14 ENSMUST00000099355.12 ENSMUST00000105293.11 |
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| CDS TCA 72 bp | GCATCACTAGGATCTGAATTAATAATCTGTGCAGCCTaGCTTATGTCAGCTTGCAGAGACTTAGCTACGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASLGSELIICAA*LMSACRDLATK Trigger: CTTCGTAGCTAAGTCTCTGCAAGCTGACATAAGTCAGGCTGCACAGATTATTAATTCAGATCCTAGTGATGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020123.7 |
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