Pregenerated sensors for TMOD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005628Ensembl transcript IDs: ENSMUST00000005769.13, ENSMUST00000107227.4, ENSMUST00000131597.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGGGTCATGGCGTGGGCTaGCCGAGCTCGTGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLGHGVG*PSSWSL Trigger: CAAGGACCACGAGCTCGGGCAGCCCACGCCATGACC...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTTCCGGGTCATGGCGTaGGCTGCCCGAGCTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLFRVMA*AARARG Trigger: ACCACGAGCTCGGGCAGCCCACGCCATGACCCGGAA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGGTCATGGCGTGGGCTaGCCGAGCTCGTGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISGHGVG*PSSWSL Trigger: CAAGGACCACGAGCTCGGGCAGCCCACGCCATGACC...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTCCGGGTCATGGCGTaGGCTGCCCGAGCTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLFRVMA*AARARG Trigger: ACCACGAGCTCGGGCAGCCCACGCCATGACCCGGAA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCATTGTTCCGGGTCATaGCGTGGGCTGCCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLHCSGS*RGLPEL Trigger: GAGCTCGGGCAGCCCACGCCATGACCCGGAACAATG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCCATTGTTCCGGGTCATaGCGTGGGCTGCCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLHCSGS*RGLPEL Trigger: GAGCTCGGGCAGCCCACGCCATGACCCGGAACAATG...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGGCATCACCAGGCCACTaGCGCTGGTTATCTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLASPGH*RWLSTR Trigger: CCGTGTAGATAACCAGCGCCAGTGGCCTGGTGATGC...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCAGGCTCTGGAGACTaGGGTTCTCACGCAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLSGSGD*GSHATC Trigger: ACATGTTGCGTGAGAACCGCAGTCTCCAGAGCCTGA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTTGTCTCAGGCCAGCTaGCAAGAGCATGTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLLSQAS*QEHVLR Trigger: CCTGAGAACATGCTCTTGCCAGCTGGCCTGAGACAA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCAGCATCTGTAGCATaGGACAGCGCTTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLSASVA*DSASSS Trigger: GCTGGAGGAAGCGCTGTCCCATGCTACAGATGCTGA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGACTGCTCTAGCACAGTaGCCATCTCCATCTCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLTALAQ*PSPSLP Trigger: CGGTAGAGATGGAGATGGCCACTGTGCTAGAGCAGT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGGCTGCCCGAGCTCGTaGTCCTTGTTGTGTAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISGCPSS*SLLCKV Trigger: CACTTTACACAACAAGGACCACGAGCTCGGGCAGCC...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCGGCTGCCCGAGCTCGTaGTCCTTGTTGTGTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLGCPSS*SLLCKV Trigger: CACTTTACACAACAAGGACCACGAGCTCGGGCAGCC...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCATGCCCAGGATGGCTaGAATGTCACACATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLHAQDG*NVTHFS Trigger: GCTGAAATGTGTGACATTGCAGCCATCCTGGGCATG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTCAGGCTCTGGAGACTaGGGTTCTCACGCAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISSGSGD*GSHATC Trigger: ACATGTTGCGTGAGAACCGCAGTCTCCAGAGCCTGA...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCTCAGGCCAGCTaGCAAGAGCATGTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLLSQAS*QEHVLR Trigger: CCTGAGAACATGCTCTTGCCAGCTGGCCTGAGACAA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCAATGTTCAGGCTCTaGAGACTGCGGTTCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLSMFRL*RLRFSR Trigger: GCGTGAGAACCGCAGTCTCCAGAGCCTGAACATTGA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTCAATGTTCAGGCTCTaGAGACTGCGGTTCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISSMFRL*RLRFSR Trigger: GCGTGAGAACCGCAGTCTCCAGAGCCTGAACATTGA...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCACTGCTCTAGCACAGTaGCCATCTCCATCTCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLTALAQ*PSPSLP Trigger: CGGTAGAGATGGAGATGGCCACTGTGCTAGAGCAGT...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR TCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTAGTCATCACGCTCTTTaGCTTCTAGCGCCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISSHHAL*LLAPVA Trigger: AGCAACAGGCGCTAGAAGTCAAAGAGCGTGATGACT...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCATGCCCAGGATGGCTaGAATGTCACACATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISHAQDG*NVTHFS Trigger: GCTGAAATGTGTGACATTGCAGCCATCCTGGGCATG...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCGGACTCTTCTTTGTCTaGTCACGTTGTCTCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLGLFFV*SRCLRP Trigger: TGGCCTGAGACAACGTGACCAGACAAAGAAGAGTCC...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGGACTCTTCTTTGTCTaGTCACGTTGTCTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISGLFFV*SRCLRP Trigger: TGGCCTGAGACAACGTGACCAGACAAAGAAGAGTCC...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR TCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCCTGGATATTATTaGGGTTCACCTCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISCPGYY*GSPPPA Trigger: AGCTGGAGGAGGTGAACCTCAATAATATCCAGGACA...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR TCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGTCCTGGATATTATTaGGGTTCACCTCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLCPGYY*GSPPPA Trigger: AGCTGGAGGAGGTGAACCTCAATAATATCCAGGACA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR TCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTATCTCTTCTTTTGCTaGCGACGCAGCTCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLYLFFC*RRSSLF Trigger: GAACAATGAGCTGCGTCGTCAGCAAAAGAAGAGATA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCATCAGTGTATACATaGCCAGGATGGCTGCAATGT | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLSSVYT*PGWLQC Trigger: ACATTGCAGCCATCCTGGGCATGTATACACTGATGA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR TCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTATCTCTTCTTTTGCTaGCGACGCAGCTCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLYLFFC*RRSSLF Trigger: GAACAATGAGCTGCGTCGTCAGCAAAAGAAGAGATA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCCGTAATCTGTTCCTGTaGTGGGATTTCTCTCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLRNLFL*WDFSLR Trigger: CCTAAGAGAGAAATCCCAGCACAGGAACAGATTACG...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTAGGTTCATCTGGTACTaGCTTATACTTGTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISRFIWY*LILVRL Trigger: CAGCCTGACAAGTATAAGCCAGTACCAGATGAACCT...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCAGGTTCATCTGGTACTaGCTTATACTTGTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLRFIWY*LILVRL Trigger: CAGCCTGACAAGTATAAGCCAGTACCAGATGAACCT...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGAATGTTTGTGGGATTTaGAGGTTCATCTGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLNVCGI*RFIWYW Trigger: CCAGTACCAGATGAACCTCCAAATCCCACAAACATT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCTCCTCAATGTTTGTaGGATTTGGAGGTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLSPQCL*DLEVHL Trigger: CAGATGAACCTCCAAATCCCACAAACATTGAGGAGA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCCTTGTTGTGTAAAGTaGTACCCGAAGCGGACAATA | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISPCCVK*YPKRTI Trigger: TATTGTCCGCTTCGGGTACCACTTTACACAACAAGG...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTATACATGCCCAGGATaGCTGCAATGTCACACATTT | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLYTCPG*LQCHTF Trigger: AAATGTGTGACATTGCAGCCATCCTGGGCATGTATA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTATACATGCCCAGGATaGCTGCAATGTCACACATTT | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISYTCPG*LQCHTF Trigger: AAATGTGTGACATTGCAGCCATCCTGGGCATGTATA...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGTCTCTCCACTGCAGATaGCATCATAATATTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLSLHCR*HHNIAC Trigger: ACAAGCAATATTATGATGCCATCTGCAGTGGAGAGA...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGATTTGGAGGTTCATCTaGTACTGGCTTATACTTGTC | + |
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Preference number: 4 (lower is better) Translates to: YRKGERDEDLCVPGSHLLIWRFI*YWLILV Trigger: GACAAGTATAAGCCAGTACCAGATGAACCTCCAAAT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTCTCCTCAATGTTTGTaGGATTTGGAGGTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FTGKEREMRICASQALISSPQCL*DLEVHL Trigger: CAGATGAACCTCCAAATCCCACAAACATTGAGGAGA...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR GCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGCAGATCTCTCCACTaGAGATGGCATCATAATATT | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLCRSLH*RWHHNI Trigger: AATATTATGATGCCATCTGCAGTGGAGAGATCTGCA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCCGGACATAGGTATTaGTTTTCATTGCTTCACACA | + |
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Preference number: 4 (lower is better) Translates to: IYRKGERDEDLCVPGSHLSGHRY*FSLLHT Trigger: TGTGTGAAGCAATGAAAACCAATACCTATGTCCGGA...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CCA 90 bp | GTCATGGCGTGGGCTGCCCGAGCTCGTGGTCCTTGTTGTGTAAAGTaGTACCCGAAGCGGACAATAGACGGACACTGCTCTAGCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: VMAWAARARGPCCVK*YPKRTIDGHCSSTV Trigger: CACTGTGCTAGAGCAGTGTCCGTCTATTGTCCGCTTCGGGTACCACTTTACACAACAAGGACCACGAGCTCGGGCAGCCCACGCCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS GCA 90 bp | CCTTGTTGTGTAAAGTGGTACCCGAAGCGGACAATAGACGGACACTaGTCTAGCACAGTGGCCATCTCCATCTCTACCGCATCACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PCCVKWYPKRTIDGH*SSTVAISISTASPG Trigger: GCCTGGTGATGCGGTAGAGATGGAGATGGCCACTGTGCTAGAGCAGTGTCCGTCTATTGTCCGCTTCGGGTACCACTTTACACAACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCCACCGCATTGGCGATaGGGTCACCACTCTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLPPHWR*GHHSLW Trigger: CCACAAAGAGTGGTGACCCAATCGCCAATGCGGTGG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCTTTGTCTGGTCACGTaGTCTCAGGCCAGCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLLCLVT*SQASWQ Trigger: TTGCCAGCTGGCCTGAGACAACGTGACCAGACAAAG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCCGAGCTCGTGGTCCTaGTTGTGTAAAGTGGTACCC | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLPSSWS*LCKVVP Trigger: GGGTACCACTTTACACAACAAGGACCACGAGCTCGG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCTTTGTCTGGTCACGTaGTCTCAGGCCAGCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FTGKEREMRICASQALISLCLVT*SQASWQ Trigger: TTGCCAGCTGGCCTGAGACAACGTGACCAGACAAAG...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGACCTCCTCCAGCTCTTaGTCATTACTCCGTACCCTC | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLTSSSS*SLLRTL Trigger: GAGGGTACGGAGTAATGACAAAGAGCTGGAGGAGGT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTCCGAGCTCGTGGTCCTaGTTGTGTAAAGTGGTACCC | + |
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Preference number: 5 (lower is better) Translates to: FTGKEREMRICASQALISPSSWS*LCKVVP Trigger: GGGTACCACTTTACACAACAAGGACCACGAGCTCGG...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS TCA 90 bp | CCACCGCATTGGCGATTGGGTCACCACTCTTTGTGGCCACCAGACTaGAGCTCCGGACATAGGTATTGGTTTTCATTGCTTCACACAAGT | + |
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Preference number: 5 (lower is better) Translates to: PPHWRLGHHSLWPPD*SSGHRYWFSLLHTS Trigger: ACTTGTGTGAAGCAATGAAAACCAATACCTATGTCCGGAGCTTCAGTCTGGTGGCCACAAAGAGTGGTGACCCAATCGCCAATGCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS GCA 90 bp | AAGTCATCACGCTCTTTGACTTCTAGCGCCTGTTGCTCCAGGTACTaGAATAGGGCATCTCTGTCCAGTGGCCCTGTTGGACTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KSSRSLTSSACCSRY*NRASLSSGPVGLFF Trigger: AAAGAAGAGTCCAACAGGGCCACTGGACAGAGATGCCCTATTGCAGTACCTGGAGCAACAGGCGCTAGAAGTCAAAGAGCGTGATGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGCTAATGCCTTCTGTGTaGCAGATCTCTCCACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLLMPSV*QISPLQ Trigger: CTGCAGTGGAGAGATCTGCAACACAGAAGGCATTAG...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGGGTACTGGCTTATACTaGTCAGGCTGTACCACACTG | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLGTGLY*SGCTTL Trigger: CAGTGTGGTACAGCCTGACAAGTATAAGCCAGTACC...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCAAGTCATCACGCTCTTaGACTTCTAGCGCCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: IYRKGERDEDLCVPGSHLKSSRS*TSSACC Trigger: GCAACAGGCGCTAGAAGTCAAAGAGCGTGATGACTT...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGATGTCCTGGATATTATaGAGGTTCACCTCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLMSWIL*RFTSSS Trigger: GCTGGAGGAGGTGAACCTCAATAATATCCAGGACAT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGGCATCTCCTCAATGTTaGTGGGATTTGGAGGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLASPQC*WDLEVH Trigger: ATGAACCTCCAAATCCCACAAACATTGAGGAGATGC...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTATGTCCTGGATATTATaGAGGTTCACCTCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: FTGKEREMRICASQALISMSWIL*RFTSSS Trigger: GCTGGAGGAGGTGAACCTCAATAATATCCAGGACAT...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCCAATGTTTGTGGGATTaGGAGGTTCATCTGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: IYRKGERDEDLCVPGSHLQCLWD*EVHLVL Trigger: CAGTACCAGATGAACCTCCAAATCCCACAAACATTG...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTGATGGCATCATAATATaGCTTGTTGCTCATCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: FTGKEREMRICASQALISDGIII*LVAHQC Trigger: ACACTGATGAGCAACAAGCAATATTATGATGCCATC...AGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | ATTTACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCGATGGCATCATAATATaGCTTGTTGCTCATCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: IYRKGERDEDLCVPGSHLDGIII*LVAHQC Trigger: ACACTGATGAGCAACAAGCAATATTATGATGCCATC...GAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAAAGGAGAGAGAGATGAGGATCTGTGCGTCCCAGGCTCTCATCTCTTGAGGTATTGGTTTTCATaGCTTCACACAAGTCACTTA | + |
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Preference number: 5 (lower is better) Translates to: YRKGERDEDLCVPGSHLLRYWFS*LHTSHL Trigger: TAAGTGACTTGTGTGAAGCAATGAAAACCAATACCT...CAAGAGATGAGAGCCTGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CCA 72 bp | TCTTTTGCTGACGACGCAGCTCATTGTTCCGGGTCATaGCGTGGGCTGCCCGAGCTCGTGGTCCTTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SFADDAAHCSGS*RGLPELVVLVV Trigger: CACAACAAGGACCACGAGCTCGGGCAGCCCACGCCATGACCCGGAACAATGAGCTGCGTCGTCAGCAAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CCA 72 bp | TGGGCTGCCCGAGCTCGTGGTCCTTGTTGTGTAAAGTaGTACCCGAAGCGGACAATAGACGGACACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WAARARGPCCVK*YPKRTIDGHCS Trigger: AGAGCAGTGTCCGTCTATTGTCCGCTTCGGGTACCACTTTACACAACAAGGACCACGAGCTCGGGCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CAA 72 bp | GGGCATCTCTGTCCAGTGGCCCTGTTGGACTCTTCTTaGTCTGGTCACGTTGTCTCAGGCCAGCTGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GHLCPVALLDSS*SGHVVSGQLAR Trigger: TCTTGCCAGCTGGCCTGAGACAACGTGACCAGACAAAGAAGAGTCCAACAGGGCCACTGGACAGAGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS GCA 72 bp | CGCTCTTTGACTTCTAGCGCCTGTTGCTCCAGGTACTaGAATAGGGCATCTCTGTCCAGTGGCCCTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSLTSSACCSRY*NRASLSSGPVG Trigger: TCCAACAGGGCCACTGGACAGAGATGCCCTATTGCAGTACCTGGAGCAACAGGCGCTAGAAGTCAAAGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS GCA 72 bp | GTAAAGTGGTACCCGAAGCGGACAATAGACGGACACTaGTCTAGCACAGTGGCCATCTCCATCTCTACCGCA | + |
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Preference number: 6 (lower is better) Translates to: VKWYPKRTIDGH*SSTVAISISTA Trigger: TGCGGTAGAGATGGAGATGGCCACTGTGCTAGAGCAGTGTCCGTCTATTGTCCGCTTCGGGTACCACTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CAA 90 bp | ACTGCAATAGGGCATCTCTGTCCAGTGGCCCTGTTGGACTCTTCTTaGTCTGGTCACGTTGTCTCAGGCCAGCTGGCAAGAGCATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: TAIGHLCPVALLDSS*SGHVVSGQLARACS Trigger: AGAACATGCTCTTGCCAGCTGGCCTGAGACAACGTGACCAGACAAAGAAGAGTCCAACAGGGCCACTGGACAGAGATGCCCTATTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS TCA 72 bp | TCTCGCCAGTGTAGGGCACCAAGTCATCACGCTCTTTaGCTTCTAGCGCCTGTTGCTCCAGGTACTGCAATA | + |
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Preference number: 6 (lower is better) Translates to: SRQCRAPSHHAL*LLAPVAPGTAI Trigger: TATTGCAGTACCTGGAGCAACAGGCGCTAGAAGTCAAAGAGCGTGATGACTTGGTGCCCTACACTGGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS CAA 90 bp | ATCTCTGTCCAGTGGCCCTGTTGGACTCTTCTTTGTCTGGTCACGTaGTCTCAGGCCAGCTGGCAAGAGCATGTTCTCAGGATCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: ISVQWPCWTLLCLVT*SQASWQEHVLRIHF Trigger: GAAATGGATCCTGAGAACATGCTCTTGCCAGCTGGCCTGAGACAACGTGACCAGACAAAGAAGAGTCCAACAGGGCCACTGGACAGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS GCA 72 bp | ACCAAGTCATCACGCTCTTTGACTTCTAGCGCCTGTTaGTCCAGGTACTGCAATAGGGCATCTCTGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TKSSRSLTSSAC*SRYCNRASLSS Trigger: ACTGGACAGAGATGCCCTATTGCAGTACCTGGAGCAACAGGCGCTAGAAGTCAAAGAGCGTGATGACTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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| CDS TCA 72 bp | TGGCGATTGGGTCACCACTCTTTGTGGCCACCAGACTaGAGCTCCGGACATAGGTATTGGTTTTCATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: WRLGHHSLWPPD*SSGHRYWFSLL Trigger: AAGCAATGAAAACCAATACCTATGTCCGGAGCTTCAGTCTGGTGGCCACAAAGAGTGGTGACCCAATCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS CAA 90 bp | ATTGGGATGTCCTGGATATTATTGAGGTTCACCTCCTCCAGCTCTTaGTCATTACTCCGTACCCTCTTTAGCATCTCCTCAATGTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IGMSWILLRFTSSSS*SLLRTLFSISSMFV Trigger: CACAAACATTGAGGAGATGCTAAAGAGGGTACGGAGTAATGACAAAGAGCTGGAGGAGGTGAACCTCAATAATATCCAGGACATCCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 |
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| CDS GCA 72 bp | CATCATAATATTGCTTGTTGCTCATCAGTGTATACATaGCCAGGATGGCTGCAATGTCACACATTTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HHNIACCSSVYT*PGWLQCHTFQH Trigger: ATGCTGAAATGTGTGACATTGCAGCCATCCTGGGCATGTATACACTGATGAGCAACAAGCAATATTATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005769.13 ENSMUST00000107227.4 ENSMUST00000131597.8 |
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