Pregenerated sensors for TMOD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058587Ensembl transcript IDs: ENSMUST00000072232.9, ENSMUST00000214171.2, ENSMUST00000215821.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTaGCTCTGCCACTCCTGTAGGAGCTGCATGGGGCAGAGCATAGAT | + |
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Preference number: 1 (lower is better) Translates to: FVLPWAFFLSTVCCV*LCHSCRSCMGQSID Trigger: ATCTATGCTCTGCCCCATGCAGCTCCTACAGGAGTGGCAGAGGCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR GCA 90 bp | CTCTCCACTGTCTGCTGTGTGTGCCTCTGCCACTCCTGTAGGAGCTaGATGGGGCAGAGCATAGATACAGACGAAAGTCCTCTAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LSTVCCVCLCHSCRS*MGQSIDTDESPLAG Trigger: CCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCCCATGCAGCTCCTACAGGAGTGGCAGAGGCACACACAGCAGACAGTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 90 bp | GGGCAGAGCATAGATACAGACGAAAGTCCTCTAGCAGGGCATCGGTaGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTC | + |
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Preference number: 1 (lower is better) Translates to: GQSIDTDESPLAGHR*AASPNPTVQIKPSF Trigger: GAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCACCGATGCCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR TCA 90 bp | GTCTCATTACGGATGGTTGTGAGCCACTATGTGGTTGTTGGGATTTaGACTCAGGACCTCCAGAAGAGCAGTCAGGACTCTTACCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: VSLRMVVSHYVVVGI*TQDLQKSSQDSYPL Trigger: TAGAGGGTAAGAGTCCTGACTGCTCTTCTGGAGGTCCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGTAATGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 90 bp | GCATCAGGTCTCATTACGGATGGTTGTGAGCCACTATGTGGTTGTTaGGATTTGAACTCAGGACCTCCAGAAGAGCAGTCAGGACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASGLITDGCEPLCGC*DLNSGPPEEQSGLL Trigger: TAAGAGTCCTGACTGCTCTTCTGGAGGTCCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGTAATGAGACCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 90 bp | AGTCTTTTCTTCAGTTGTATAATACTTCACAGGCCAGCACTGGCATaGTTTAAGCAACCGTCGACTTGTTCGTGCTTCCCTGGGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SLFFSCIILHRPALA*FKQPSTCSCFPGPS Trigger: AGAAGGCCCAGGGAAGCACGAACAAGTCGACGGTTGCTTAAACCATGCCAGTGCTGGCCTGTGAAGTATTATACAACTGAAGAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 90 bp | AAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTaGGGGTATTGCCAAACCTCAAACCACACTACAGGAGCTACAGAC | + |
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Preference number: 1 (lower is better) Translates to: KSTGSQSNSKEQEQK*GYCQTSNHTTGATD Trigger: GTCTGTAGCTCCTGTAGTGTGGTTTGAGGTTTGGCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR TCA 90 bp | TTCATTGGTGAAAACGTGCCACTTAAGGATCACAAACATCCTCCTTaGAATGACCAACAGTCTGCTAATATGTTTAACACAAAATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: FIGENVPLKDHKHPP*NDQQSANMFNTKCL Trigger: TAAACATTTTGTGTTAAACATATTAGCAGACTGTTGGTCATTTCAAGGAGGATGTTTGTGATCCTTAAGTGGCACGTTTTCACCAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR TCA 90 bp | CGTCGACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGACACTGCTCATCCGTaGGATGGCCACCTTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: RRLVRASLGLLPLHCLLCDTAHP*DGHLAN Trigger: ATTTGCAAGGTGGCCATCTCACGGATGAGCAGTGTC...ACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CCA 90 bp | CGTCGACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTAAACCTGCACACAGATaGCTGTTGTGTCCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RRLVRASLGLLPLHCLLCKPAHR*LLCPLQ Trigger: CTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTT...ACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CCA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTAGCAGGGCATCGGTaGGCAGCCTCACCCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: RIAPLVKDTAHFIGENVPLAGHR*AASPNP Trigger: GGGGTTGGGTGAGGCTGCCCACCGATGCCCTGCTAG...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCGACTCATTAGATGTGTaGAGAAACCTGCACACAGAT | + |
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Preference number: 2 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCDSLDV*RNLHTD Trigger: ATCTGTGTGCAGGTTTCTGCACACATCTAATGAGTC...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGTGCTGTGTGTGCCTCTaGCACTCCTGTAGGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: APLVKDTAHFIGENVPLKCCVCL*HSCRSC Trigger: GCAGCTCCTACAGGAGTGGCAGAGGCACACACAGCA...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACCGTCGACTTGTTCGTaGTTCCCTGGGCCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RIAPLVKDTAHFIGENVPPSTCS*FPGPSS Trigger: GGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACGG...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATTGCTGCAGCAGAGGAGGATaGAGCAGAGGAGGACGCAGC | + |
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Preference number: 2 (lower is better) Translates to: STGSQSNSKEQEQKWGYCCSRGG*SRGGRS Trigger: GCTGCGTCCTCCTCTGCTGCATCCTCCTCTGCTGCA...GCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACGTCTTTGTGATTGGCTaGAACACGGTGGAGGGGATT | + |
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Preference number: 2 (lower is better) Translates to: VGSLTQPHCTDQTLILTNVFVIG*NTVEGI Trigger: AATCCCCTCCACCGTGTTCCAGCCAATCACAAAGAC...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CAA 90 bp | GGTCTCATTACGGATGGTTGTGAGCCACTATGTGGTTGTTGGGATTaGAACTCAGGACCTCCAGAAGAGCAGTCAGGACTCTTACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GLITDGCEPLCGCWD*NSGPPEEQSGLLPS Trigger: AGAGGGTAAGAGTCCTGACTGCTCTTCTGGAGGTCCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGTAATGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR TCA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCTACATACACGACTTCTaGAACTTTCCACAACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCYIHDF*NFPQLH Trigger: ATGCAGTTGTGGAAAGTTTCAGAAGTCGTGTATGTA...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCAGGCTGTTGTGTCCCCTaGAGGCCTACTTTGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: RIAPLVKDTAHFIGENVPGCCVP*RPTLAY Trigger: ATAAGCCAAAGTAGGCCTGCAGGGGACACAACAGCC...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACGCCAAGAGCCTTTTATaGGGAAAAGAACCTCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: VGSLTQPHCTDQTLILTNAKSLL*GKEPLY Trigger: GTAGAGAGGTTCTTTTCCCCATAAAAGGCTCTTGGC...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGTTGTTCGTGCTTCCCTaGGCCTTCTTCCTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: APLVKDTAHFIGENVPLKLFVLP*AFFLST Trigger: AGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAA...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | AAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATAAGAGTAGAGGAGGATaGAGCAGAGGAGGACGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KSTGSQSNSKEQEQKWGYKSRGG*SRGGRS Trigger: GCTGCGTCCTCCTCTGCTGCATCCTCCTCTACTCTT...ATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACAGATATAATGGATTCTaGGCCACCTTTCAAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: VGSLTQPHCTDQTLILTNRYNGF*ATFQNS Trigger: GGAATTTTGAAAGGTGGCTCAGAATCCATTATATCT...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATACCAGCCCCGTGCAGCTaGGACTCATTAGATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TYNYTFNKVCSGTELRTIPAPCS*DSLDVC Trigger: GCACACATCTAATGAGTCTCAGCTGCACGGGGCTGG...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR TCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGCACAAACATCCTCCTTaGAATGACCAACAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: APLVKDTAHFIGENVPLKHKHPP*NDQQSA Trigger: AGCAGACTGTTGGTCATTTCAAGGAGGATGTTTGTG...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGAATTTTTACATCTGCTaGCACCAACACGAGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: APLVKDTAHFIGENVPLKNFYIC*HQHEPL Trigger: CAGAGGCTCGTGTTGGTGGCAGCAGATGTAAAAATT...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCAGGTAATTTTTACATCTaGTGCCACCAACACGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RIAPLVKDTAHFIGENVPGNFYI*CHQHEP Trigger: AGGCTCGTGTTGGTGGCAGCAGATGTAAAAATTACC...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAACGCATATAGAATCACAAAAGTCCACAGGTAGCCAAAGCAATTCTAAATGCAGCAGAAGAGGATaGAGCAGAGGAGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PRTHIESQKSTGSQSNSKCSRRG*SRGGCS Trigger: GCTGCATCCTCCTCTGCTGCATCCTCTTCTGCTGCA...TTTAGAATTGCTTTGGCTACCTGTGGACTTTTGTGATTCTATATGCGTTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAACGCATATAGAATCACAAAAGTCCACAGGTAGCCAAAGCAATTCTAAACAGGAGCTACAGACTTaGAACCGAGTAGAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: PRTHIESQKSTGSQSNSKQELQT*NRVEDW Trigger: CCAGTCCTCTACTCGGTTCCAAGTCTGTAGCTCCTG...TTTAGAATTGCTTTGGCTACCTGTGGACTTTTGTGATTCTATATGCGTTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR CAA 90 bp | TGCACCTATGGAATCACATATAGCGCTCCTCATCAGACAACAAGTTaGTTCTTTCCTTTTCCTGACATAGGTTCTCACATATGTAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: CTYGITYSAPHQTTS*FFPFPDIGSHICSP Trigger: TGGGCTACATATGTGAGAACCTATGTCAGGAAAAGGAAAGAACAAACTTGTTGTCTGATGAGGAGCGCTATATGTGATTCCATAGGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAACGCATATAGAATCACAAAAGTCCACAGGTAGCCAAAGCAATTCTAAACAAAAGTGGGGGTATTaGCAAACCTCAAACCACACT | + |
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Preference number: 2 (lower is better) Translates to: PRTHIESQKSTGSQSNSKQKWGY*QTSNHT Trigger: AGTGTGGTTTGAGGTTTGGCAATACCCCCACTTTTG...TTTAGAATTGCTTTGGCTACCTGTGGACTTTTGTGATTCTATATGCGTTCTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR GCA 72 bp | CCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTaGCTCTGCCACTCCTGTAGGAGCTGCATGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PWAFFLSTVCCV*LCHSCRSCMGQ Trigger: CTGCCCCATGCAGCTCCTACAGGAGTGGCAGAGGCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR GCA 72 bp | TTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTaGTGTGTGTGCCTCTGCCACTCCTGTAGGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: FVLPWAFFLSTV*CVCLCHSCRSC Trigger: GCAGCTCCTACAGGAGTGGCAGAGGCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR GCA 72 bp | GCACTGGCATGGTTTAAGCAACCGTCGACTTGTTCGTaGTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: ALAWFKQPSTCS*FPGPSSSPLSA Trigger: AGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACGGTTGCTTAAACCATGCCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CAA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCAGCACACAGATGGCTGTaGTGTCCCCTGCAGGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: RIAPLVKDTAHFIGENVPAHRWL*CPLQAY Trigger: GTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGC...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR TCA 72 bp | GACTATAGGAGACATACACACCCAGCCCCGTGCAGCTaGGACTCATTAGATGTGTGCAGAAACCTGCACACA | + |
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Preference number: 3 (lower is better) Translates to: DYRRHTHPAPCS*DSLDVCRNLHT Trigger: TGTGTGCAGGTTTCTGCACACATCTAATGAGTCTCAGCTGCACGGGGCTGGGTGTGTATGTCTCCTATAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR TCA 72 bp | AGCTCACGTCAGTTCCTGACGGACACTGCTCATCCGTaGGATGGCCACCTTGCAAATTTCAGGTTTGAACTC | + |
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Preference number: 3 (lower is better) Translates to: SSRQFLTDTAHP*DGHLANFRFEL Trigger: GAGTTCAAACCTGAAATTTGCAAGGTGGCCATCTCACGGATGAGCAGTGTCCGTCAGGAACTGACGTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGCATCAGGTCTCATTACGGATGGTTGTaGGCCACTATGTGGTTGTTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGIRSHYGWL*ATMWLLGFELR Trigger: CCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGTAATGAGACCTGATGCCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 72 bp | AGACTCATTAGATGTGTGCAGAAACCTGCACACAGATaGCTGTTGTGTCCCCTGCAGGCCTACTTTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: RLIRCVQKPAHR*LLCPLQAYFGL Trigger: TAAGCCAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACACATCTAATGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR CCA 72 bp | CTCATTACGGATGGTTGTGAGCCACTATGTGGTTGTTaGGATTTGAACTCAGGACCTCCAGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LITDGCEPLCGC*DLNSGPPEEQS Trigger: TGACTGCTCTTCTGGAGGTCCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGTAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGACAGGAGCTACAGACTaGGAACCGAGTAGAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: QKSTGSQSNSKEQEQKWGTGATD*EPSRGL Trigger: CAGTCCTCTACTCGGTTCCAAGTCTGTAGCTCCTGT...CCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR CCA 72 bp | TTCAGTTGTATAATACTTCACAGGCCAGCACTGGCATaGTTTAAGCAACCGTCGACTTGTTCGTGCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FSCIILHRPALA*FKQPSTCSCFP Trigger: AGGGAAGCACGAACAAGTCGACGGTTGCTTAAACCATGCCAGTGCTGGCCTGTGAAGTATTATACAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR-3UTR CAA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACTTGCAAATTTCAGGTTaGAACTCTCCTACATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: VGSLTQPHCTDQTLILTNLQISG*NSPTSN Trigger: GTTAGATGTAGGAGAGTTCAAACCTGAAATTTGCAA...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR GCA 72 bp | AGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATTaGCAAACCTCAAACCACACTACAGGAGCTACAGAC | + |
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Preference number: 3 (lower is better) Translates to: SNSKEQEQKWGY*QTSNHTTGATD Trigger: GTCTGTAGCTCCTGTAGTGTGGTTTGAGGTTTGGCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR CCA 72 bp | GGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTaGGGGTATTGCCAAACCTCAAACCACACTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: GSQSNSKEQEQK*GYCQTSNHTTG Trigger: TCCTGTAGTGTGGTTTGAGGTTTGGCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
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| 3UTR TCA 72 bp | CAGGCCTACTTTGGCTTATGTAGATATAATGGATTCTaGGCCACCTTTCAAAATTCCGACATTTTATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: QAYFGLCRYNGF*ATFQNSDILFP Trigger: GGGAAATAAAATGTCGGAATTTTGAAAGGTGGCTCAGAATCCATTATATCTACATAAGCCAAAGTAGGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| 3UTR TCA 72 bp | GAAAACGTGCCACTTAAGGATCACAAACATCCTCCTTaGAATGACCAACAGTCTGCTAATATGTTTAACACA | + |
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Preference number: 3 (lower is better) Translates to: ENVPLKDHKHPP*NDQQSANMFNT Trigger: TGTGTTAAACATATTAGCAGACTGTTGGTCATTTCAAGGAGGATGTTTGTGATCCTTAAGTGGCACGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS-3UTR TCA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCTCCCGTGGCAGACTTTaGTGTCTGGTTCTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCSRGRL*CLVLLP Trigger: CGGCAGAAGAACCAGACATCAAAGTCTGCCACGGGA...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR TCA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCCAGCTGTTTCAGCTCTaGTTCGGACAGCTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCQLFQL*FGQLAK Trigger: CTTGGCAAGCTGTCCGAATCAGAGCTGAAACAGCTG...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGCTTCTGCCGAAACCCTaGAGGCAGAAGGGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLLLPKP*RQKGIL Trigger: GAGAATGCCCTTCTGCCTGCAGGGTTTCGGCAGAAG...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR TCA 90 bp | CGTCGACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGCACAGCTCTGTGTCTaGAGCACTTGTCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVRASLGLLPLHCLLCAQLCV*STCQSF Trigger: GAAGCTTTGACAAGTGCTTCAGACACAGAGCTGTGC...ACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACGATGTCTGGTTCTTCTaGCGAAACCCTGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSLTQPHCTDQTLILTNDVWFF*RNPAGR Trigger: TCTGCCTGCAGGGTTTCGGCAGAAGAACCAGACATC...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGCACTTTCAGCATATCTaGAAAAGCAACAGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLHFQHI*KSNSHG Trigger: CCCGTGGCTGTTGCTTTTGCAGATATGCTGAAAGTG...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | CGTCGACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTTTCACATGCGTGTTaGCTTCCAAAGTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRLVRASLGLLPLHCLLCVSHAC*LPKSLQ Trigger: TTGCAAAGACTTTGGAAGCCAACACGCATGTGAAAC...ACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTCGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACTATGTGGTTGTTGGGATTaGAACTCAGGACCTCCAGAAGAGCAGTCAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPLCGCWD*NSGPPEEQSGL Trigger: GAGTCCTGACTGCTCTTCTGGAGGTCCTGAGTTCAAATCCCAACAACCACATAGTGGCTCACAACCATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGTCTGCAATCAGATTGTaGATCCCAAGAATAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLSAIRL*IPRIAA Trigger: TGCAGCTATTCTTGGGATGCACAATCTGATTGCAGA...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGCTGAAATGTTTCACATaGGTGTTGGCTTCCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLLKCFT*VLASKV Trigger: GACTTTGGAAGCCAACACGCATGTGAAACATTTCAG...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGCTTCAATTCGCCTCTTaGGCACTAAGTCATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLLQFAS*ALSHCS Trigger: AGAACAATGACTTAGTGCGCAAGAGGCGAATTGAAG...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR TCA 90 bp | TCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATTGCTCCCGTGGCAGACTTTaGTGTCTGGTTCTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: STGSQSNSKEQEQKWGYCSRGRL*CLVLLP Trigger: CGGCAGAAGAACCAGACATCAAAGTCTGCCACGGGA...GCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACTCTGATTGTCAATCTTaGGCTCCATCAGGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSLTQPHCTDQTLILTNSDCQS*APSGSH Trigger: ATGAGACCCTGATGGAGCTCAAGATTGACAATCAGA...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACAACGTTGGTTGGATTTaGTGGCTCATCAAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSLTQPHCTDQTLILTNNVGWI*WLIKHW Trigger: CCAGTGTTTGATGAGCCACCAAATCCAACCAACGTT...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| 3UTR CAA 72 bp | ATTAGATGTGTGCAGAAACCTGCACACAGATGGCTGTaGTGTCCCCTGCAGGCCTACTTTGGCTTATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRCVQKPAHRWL*CPLQAYFGLCR Trigger: TCTACATAAGCCAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACACATCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGCAGCTGTTTCAGCTCTaGTTCGGACAGCTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKSTGSQSNSKEQEQKWGQLFQL*FGQLAK Trigger: CTTGGCAAGCTGTCCGAATCAGAGCTGAAACAGCTG...CCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGCCCAACTGCTGTCTCTaGTTGTCAATCTTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APLVKDTAHFIGENVPLKPNCCL*LSILSS Trigger: GGAGCTCAAGATTGACAATCAGAGACAGCAGTTGGG...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATCTTCTGCCGAAACCCTaGAGGCAGAAGGGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGSQSNSKEQEQKWGYLLPKP*RQKGIL Trigger: GAGAATGCCCTTCTGCCTGCAGGGTTTCGGCAGAAG...ATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGGAAAACGCTCTTGGTTaGCACCGTTACTACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: APLVKDTAHFIGENVPLKENALG*HRYYFP Trigger: TGGGAAGTAGTAACGGTGTCAACCAAGAGCGTTTTC...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCATATCAAAGGGTCCCGTaGCAGACTTTGATGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIAPLVKDTAHFIGENVPYQRVP*QTLMSG Trigger: ACCAGACATCAAAGTCTGCCACGGGACCCTTTGATA...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | TCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATTGCAAGAGCTGGCAAACCTaGGAGTCTACCTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGSQSNSKEQEQKWGYCKSWQT*ESTFLL Trigger: GAGAAGAAAGGTAGACTCCCAGGTTTGCCAGCTCTT...GCAATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGGTCAATAAGAAGAGCTaGCAAACCTGGGAGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QKSTGSQSNSKEQEQKWGVNKKS*QTWEST Trigger: GGTAGACTCCCAGGTTTGCCAGCTCTTCTTATTGAC...CCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTTTTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGAACGCATATAGAATCACAAAAGTCCACAGGTAGCCAAAGCAATTCTAAAGATGTCTGGTTCTTCTaGCGAAACCCTGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRTHIESQKSTGSQSNSKDVWFF*RNPAGR Trigger: TCTGCCTGCAGGGTTTCGGCAGAAGAACCAGACATC...TTTAGAATTGCTTTGGCTACCTGTGGACTTTTGTGATTCTATATGCGTTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATGCAGACTTTGATGTCTaGTTCTTCTGCCGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGSQSNSKEQEQKWGYADFDV*FFCRNP Trigger: AGGGTTTCGGCAGAAGAACCAGACATCAAAGTCTGC...ATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGCTCTTCAACGTTGGTTaGATTTGGTGGCTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: APLVKDTAHFIGENVPLKLFNVG*IWWLIK Trigger: TTTGATGAGCCACCAAATCCAACCAACGTTGAAGAG...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| 3UTR CAA 72 bp | CTCATCCGTGAGATGGCCACCTTGCAAATTTCAGGTTaGAACTCTCCTACATCTAACAGCGCCTTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIREMATLQISG*NSPTSNSAFLF Trigger: AAAAAGAAAGGCGCTGTTAGATGTAGGAGAGTTCAAACCTGAAATTTGCAAGGTGGCCATCTCACGGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATATCTTCTGTAAGAGTCTaGGCTGGCTTCTGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTISSVRV*AGFCLG Trigger: CCCCAAACAGAAGCCAGCGCAGACTCTTACAGAAGA...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | GAATCACAAAAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTATCAAAGGGTCCCGTaGCAGACTTTGATGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESQKSTGSQSNSKEQEQKYQRVP*QTLMSG Trigger: ACCAGACATCAAAGTCTGCCACGGGACCCTTTGATA...CTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTTTTGTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| 3UTR CAA 72 bp | TTCACACTCTCGTTACTGATGAAGTCTTTTCTTCAGTaGTATAATACTTCACAGGCCAGCACTGGCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSLLMKSFLQ*YNTSQASTGMV Trigger: AACCATGCCAGTGCTGGCCTGTGAAGTATTATACAACTGAAGAAAAGACTTCATCAGTAACGAGAGTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR GCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATAACAGAACGGTGTGTCTaGAATCAGATTGTGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTITERCV*NQIVHP Trigger: GGGATGCACAATCTGATTGCAGACACACCGTTCTGT...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATAGCAGACTTTGATGTCTaGTTCTTCTGCCGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTIADFDV*FFCRNP Trigger: AGGGTTTCGGCAGAAGAACCAGACATCAAAGTCTGC...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATATGTAAGAGTCTGCGCTaGCTTCTGTTTGGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTICKSLR*LLFGDK Trigger: TTTATCCCCAAACAGAAGCCAGCGCAGACTCTTACA...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| 3UTR CAA 72 bp | GGAATCACATATAGCGCTCCTCATCAGACAACAAGTTaGTTCTTTCCTTTTCCTGACATAGGTTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: GITYSAPHQTTS*FFPFPDIGSHI Trigger: TATGTGAGAACCTATGTCAGGAAAAGGAAAGAACAAACTTGTTGTCTGATGAGGAGCGCTATATGTGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATAAACTCTCTTCAACGTTaGTTGGATTTGGTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTINSLQR*LDLVAH Trigger: ATGAGCCACCAAATCCAACCAACGTTGAAGAGAGTT...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATATGGCTCATCAAACACTaGAAGAATCTTTTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTIWLIKH*KNLFPF Trigger: AAAGGGGAAAAGATTCTTCCAGTGTTTGATGAGCCA...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CCA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATATTTCCTCAAGCATCTTaGCCATTTCTAATTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TYNYTFNKVCSGTELRTIFPQAS*PFLILL Trigger: CAGTAGAATTAGAAATGGCCAAGATGCTTGAGGAAA...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCGTCCCGTGGCAGACTTaGATGTCTGGTTCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCVPWQT*MSGSSA Trigger: GGCAGAAGAACCAGACATCAAAGTCTGCCACGGGAC...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS CCA 90 bp | GCTTCTCTAGGTAAGAAAGGAGCCGTTCTCTATCAAAGGGTCCCGTaGCAGACTTTGATGTCTGGTTCTTCTGCCGAAACCCTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLGKKGAVLYQRVP*QTLMSGSSAETLQA Trigger: TGCCTGCAGGGTTTCGGCAGAAGAACCAGACATCAAAGTCTGCCACGGGACCCTTTGATAGAGAACGGCTCCTTTCTTACCTAGAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072232.9 ENSMUST00000214171.2 ENSMUST00000215821.2 |
||
| CDS-3UTR CAA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCTGTTTCACATGCGTGTaGGCTTCCAAAGTCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCCFTCV*ASKVFA Trigger: TGCAAAGACTTTGGAAGCCAACACGCATGTGAAACA...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAGCCTCACCCAACCCCACTGTACAGATCAAACCCTCATTCTAACTAACGGAAAACGCTCTTGGTaGACACCGTTACTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSLTQPHCTDQTLILTNGKRSW*TPLLLP Trigger: GGGAAGTAGTAACGGTGTCAACCAAGAGCGTTTTCC...GTTAGTTAGAATGAGGGTTTGATCTGTACAGTGGGGTTGGGTGAGGCTGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGCAGAAACCTGCACACAGATGGCTGTTGTGTCCCCTGCAGGCCTACTTTGAAACTCTCTTCAACGTaGGTTGGATTTGGTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCRNLHTDGCCVPCRPTLKLSST*VGFGGS Trigger: TGAGCCACCAAATCCAACCAACGTTGAAGAGAGTTT...CAAAGTAGGCCTGCAGGGGACACAACAGCCATCTGTGTGCAGGTTTCTGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS GCA 90 bp | GTTGACACCGTTACTACTTCCCAGCACATCACAGAACGGTGTGTCTaGAATCAGATTGTGCATCCCAAGAATAGCTGCAAGGTCGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VDTVTTSQHITERCV*NQIVHPKNSCKVAQ Trigger: CTGTGCGACCTTGCAGCTATTCTTGGGATGCACAATCTGATTGCAGACACACCGTTCTGTGATGTGCTGGGAAGTAGTAACGGTGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | GACTTGTTCGTGCTTCCCTGGGCCTTCTTCCTCTCCACTGTCTGCTGTGTGTGCTTTTCCTCAAGCATCTaGGCCATTTCTAATTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: DLFVLPWAFFLSTVCCVCFSSSI*AISNST Trigger: AGTAGAATTAGAAATGGCCAAGATGCTTGAGGAAAA...GCACACACAGCAGACAGTGGAGAGGAAGAAGGCCCAGGGAAGCACGAACAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCCACAGGTAGCCAAAGCAATTCTAAAGAGCAAGAACAAAAGTGGGGGTATGTCCCGTGGCAGACTTaGATGTCTGGTTCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSTGSQSNSKEQEQKWGYVPWQT*MSGSSA Trigger: GGCAGAAGAACCAGACATCAAAGTCTGCCACGGGAC...ATACCCCCACTTTTGTTCTTGCTCTTTAGAATTGCTTTGGCTACCTGTGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215821.2 |
||
| CDS-3UTR CAA 90 bp | GCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCACTTAAGGTGTCTGCAATCAGATaGTGCATCCCAAGAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APLVKDTAHFIGENVPLKVSAIR*CIPRIA Trigger: AGCTATTCTTGGGATGCACAATCTGATTGCAGACAC...CTTAAGTGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
||
| CDS-3UTR CAA 90 bp | AGGATTGCACCCCTTGTAAAGGACACAGCTCATTTCATTGGTGAAAACGTGCCATCTCTTCAACGTTGGTaGGATTTGGTGGCTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: RIAPLVKDTAHFIGENVPSLQRW*DLVAHQ Trigger: TTGATGAGCCACCAAATCCAACCAACGTTGAAGAGA...TGGCACGTTTTCACCAATGAAATGAGCTGTGTCCTTTACAAGGGGTGCAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS-3UTR CAA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATATCCCCTTTAACCACATaGGGAAAACGCTCTTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: TYNYTFNKVCSGTELRTISPLTT*GKRSWL Trigger: CAACCAAGAGCGTTTTCCCAATGTGGTTAAAGGGGA...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS-3UTR CAA 90 bp | ACTTATAACTATACGTTTAACAAGGTATGCAGTGGGACAGAGCTAAGGACTATACAACGTTGGTTGGATTaGGTGGCTCATCAAACACTG | + |
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Preference number: 5 (lower is better) Translates to: TYNYTFNKVCSGTELRTIQRWLD*VAHQTL Trigger: CAGTGTTTGATGAGCCACCAAATCCAACCAACGTTG...TATAGTCCTTAGCTCTGTCCCACTGCATACCTTGTTAAACGTATAGTTATAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS CAA 72 bp | CTCTTGCGCACTAAGTCATTGTTCTTCGTTATCGCGTaGGCTGCCCTGGTTCGGGGTCCCTGCTGCGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LLRTKSLFFVIA*AALVRGPCCVN Trigger: GTTCACGCAGCAGGGACCCCGAACCAGGGCAGCCAACGCGATAACGAAGAACAATGACTTAGTGCGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS CAA 72 bp | GGAGCCGTTCTCTATCAAAGGGTCCCGTGGCAGACTTaGATGTCTGGTTCTTCTGCCGAAACCCTGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GAVLYQRVPWQT*MSGSSAETLQA Trigger: TGCCTGCAGGGTTTCGGCAGAAGAACCAGACATCAAAGTCTGCCACGGGACCCTTTGATAGAGAACGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072232.9 ENSMUST00000214171.2 ENSMUST00000215821.2 |
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| CDS CAA 72 bp | CCCAGCACATCACAGAACGGTGTGTCTGCAATCAGATaGTGCATCCCAAGAATAGCTGCAAGGTCGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PSTSQNGVSAIR*CIPRIAARSHS Trigger: GCTGTGCGACCTTGCAGCTATTCTTGGGATGCACAATCTGATTGCAGACACACCGTTCTGTGATGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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| CDS CCA 72 bp | GGTAAGAAAGGAGCCGTTCTCTATCAAAGGGTCCCGTaGCAGACTTTGATGTCTGGTTCTTCTGCCGAAACC | + |
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Preference number: 6 (lower is better) Translates to: GKKGAVLYQRVP*QTLMSGSSAET Trigger: GGTTTCGGCAGAAGAACCAGACATCAAAGTCTGCCACGGGACCCTTTGATAGAGAACGGCTCCTTTCTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072232.9 ENSMUST00000214171.2 ENSMUST00000215821.2 |
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| CDS GCA 72 bp | GTTACTACTTCCCAGCACATCACAGAACGGTGTGTCTaGAATCAGATTGTGCATCCCAAGAATAGCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VTTSQHITERCV*NQIVHPKNSCK Trigger: CTTGCAGCTATTCTTGGGATGCACAATCTGATTGCAGACACACCGTTCTGTGATGTGCTGGGAAGTAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072232.9 |
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