Pregenerated sensors for TMOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028328Ensembl transcript IDs: ENSMUST00000107773.3
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGGCTGGCTGTCCCTGCAGCTTGGTGCCACTCCTGGGCCCGTGTaGAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCTC | + |
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Preference number: 1 (lower is better) Translates to: WGWLSLQLGATPGPV*SLSGHSVLRPRCHL Trigger: GAGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGGAGTGGCACCAAGCTGCAGGGACAGCCAGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 90 bp | CAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGGGGCTaGCTGTCCCTGCAGCTTGGTGCCACTCCTGGGCCCGTGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: QNAAAVVFQGEAEWG*LSLQLGATPGPVCS Trigger: GCTGCACACGGGCCCAGGAGTGGCACCAAGCTGCAGGGACAGCCAGCCCCACTCAGCTTCTCCTTGAAACACAACTGCAGCTGCATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 90 bp | GTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTaGGGCTGGCTGTCCCTGCAGCTTGGTGCCACTCCTGGGCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: VMQNAAAVVFQGEAE*GWLSLQLGATPGPV Trigger: CACGGGCCCAGGAGTGGCACCAAGCTGCAGGGACAGCCAGCCCCACTCAGCTTCTCCTTGAAACACAACTGCAGCTGCATTCTGCATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR GCA 90 bp | CCACCTCTAGTTACCCTGTACTGTCCATACTGTTACAGTTCGGTGTaGAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGCTATGCTCAACA | + |
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Preference number: 1 (lower is better) Translates to: PPLVTLYCPYCYSSV*RLSLKSEAPWLCST Trigger: TGTTGAGCATAGCCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGGACAGTACAGGGTAACTAGAGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR GCA 90 bp | CCGTGTGTTGTTTGGCCAGGATCTCCTAATTCCTTACCATTAAGATaGTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTGTAGGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: PCVVWPGSPNSLPLR*CTLLSSRGFVCRQE Trigger: CTCTTGCCTACAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGGCCAAACAACACACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 90 bp | CTAAATACCACAGGCATGGTGGACTGGAAATTCACCCAATGGTGTTaGTCTCACATAAGCCATTGCCCACTGTGGTATAGGAAGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: LNTTGMVDWKFTQWC*SHISHCPLWYRKMF Trigger: AAACATCTTCCTATACCACAGTGGGCAATGGCTTATGTGAGATCAACACCATTGGGTGAATTTCCAGTCCACCATGCCTGTGGTATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 90 bp | ATGAAGTTGGAATTCAATAAAGAAGAAATGATTTCTGACTGCAGATaGGTACCCCGCAGGTGTTCCCACAGCACTCAGAAGGATGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: MKLEFNKEEMISDCR*VPRRCSHSTQKDVC Trigger: ACAGACATCCTTCTGAGTGCTGTGGGAACACCTGCGGGGTACTCATCTGCAGTCAGAAATCATTTCTTCTTTATTGAATTCCAACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 90 bp | TGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTaGCTATGCTCAACAGCTTTTGAGCCTTATCATTACTATAATATT | + |
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Preference number: 1 (lower is better) Translates to: CYSSVCRLSLKSEAP*LCSTAFEPYHYYNI Trigger: AATATTATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACACTAGGTGGGAAGAGTaGTCTGTGCTGGTGCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHTRWEE*SVLVRP Trigger: GGGACGCACCAGCACAGAGCACTCTTCCCACCTAGT...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCTCAAGAGTGCTCTGTGCTaGTGCGTCCCATGTTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: GPVCSLSGHSVLRPRCHLKSALC*CVPCCK Trigger: CTTACAACATGGGACGCACCAGCACAGAGCACTCTT...GAGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACGTTTCAAGTGGGGGTTaGCAGATCATGATTATGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHVSSGG*QIMIMC Trigger: ACACATAATCATGATCTGTCAACCCCCACTTGAAAC...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACTGTTACAGTTCGGTGTaGAGGCTTTCTCTTAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHCYSSV*RLSLKS Trigger: TGACTTAAGAGAAAGCCTGCACACCGAACTGTAACA...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAAAGATTGTTTCACCACGCTTCCAAACTAGGTGGGAAGAGTGCTCTGTGCCCGCCAGGGGGCTCCTaGGCCGTCTCTGCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: NKRLFHHASKLGGKSALCPPGGS*AVSASV Trigger: GACACTGGCAGAGACGGCCCAGGAGCCCCCTGGCGG...GCACAGAGCACTCTTCCCACCTAGTTTGGAAGCGTGGTGAAACAATCTTTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTCGCCAGCATTCGTCCTaGGCTCCACTGGGGCACACG | + |
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Preference number: 2 (lower is better) Translates to: SPNSLPLRCCTLLSSRGFRQHSS*APLGHT Trigger: CGTGTGCCCCAGTGGAGCCCAGGACGAATGCTGGCG...AAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCATACTGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTCAGAAGGATGTCTGTTaGCTGGTGTGGTGGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VHTVTVRCAGFLLSQKPPQKDVC*LVWWVL Trigger: CAAAACCCACCACACCAGGCAACAGACATCCTTCTG...AGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGACGCTTCCAAACTAGGTaGGAAGAGTGCTCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PGSPNSLPLRCCTLLSSRRFQTR*EECSVL Trigger: CAGCACAGAGCACTCTTCCCACCTAGTTTGGAAGCG...TCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR TCA 90 bp | CCATACTGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGAATCCTGTGTCTTTCTaGCTCTTAGAAAATTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PYCYSSVCRLSLKSEAPWNPVSF*LLENSV Trigger: CACAGAATTTTCTAAGAGTCAGAAAGACACAGGATT...CCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTATACCACAGGCATGGTaGACTGGAAATTCACCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SPNSLPLRCCTLLSSRGFIPQAW*TGNSPN Trigger: ATTGGGTGAATTTCCAGTCCACCATGCCTGTGGTAT...AAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTTCTCACATAAGCCATTaGCCACTGTGGTATAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FNWHCGLLKGTRTVYLNISHISH*PLWYRK Trigger: CTTCCTATACCACAGTGGGCAATGGCTTATGTGAGA...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 72 bp | CACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTaGGCCGTCTCTGCCAGTGTCACACTGTCTGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HLGPKAGPPGGS*AVSASVTLSAA Trigger: TGCTGCAGACAGTGTGACACTGGCAGAGACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 72 bp | CTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTaGGGCCCCGATGCCACCTCTAGTTACCCTGTACTG | + |
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Preference number: 3 (lower is better) Translates to: LGPCAASVDTQC*GPDATSSYPVL Trigger: CAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 72 bp | AATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTaGGGCTGGCTGTCCCTGCAGCTTGGTGCCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: NAAAVVFQGEAE*GWLSLQLGATP Trigger: AGGAGTGGCACCAAGCTGCAGGGACAGCCAGCCCCACTCAGCTTCTCCTTGAAACACAACTGCAGCTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCTCACAAGAACAGTGTATTaGAACATTTTTACTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GPVCSLSGHSVLRPRCHLTRTVY*NIFTGS Trigger: GGAGCCAGTAAAAATGTTCAAATACACTGTTCTTGT...GAGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR GCA 72 bp | GTTACCCTGTACTGTCCATACTGTTACAGTTCGGTGTaGAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: VTLYCPYCYSSV*RLSLKSEAPWL Trigger: TAGCCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGGACAGTACAGGGTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 72 bp | ACAGGCATGGTGGACTGGAAATTCACCCAATGGTGTTaGTCTCACATAAGCCATTGCCCACTGTGGTATAGG | + |
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Preference number: 3 (lower is better) Translates to: TGMVDWKFTQWC*SHISHCPLWYR Trigger: CCTATACCACAGTGGGCAATGGCTTATGTGAGATCAACACCATTGGGTGAATTTCCAGTCCACCATGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR CCA 72 bp | TCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTaGCTATGCTCAACAGCTTTTGAGCCTTATCATTAC | + |
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Preference number: 3 (lower is better) Translates to: SVCRLSLKSEAP*LCSTAFEPYHY Trigger: GTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGATCAGAAGGATGTCTGTaGCCTGGTGTGGTGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PGSPNSLPLRCCTLLSSRSEGCL*PGVVGF Trigger: AAAACCCACCACACCAGGCAACAGACATCCTTCTGA...TCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR GCA 72 bp | GTTTGGCCAGGATCTCCTAATTCCTTACCATTAAGATaGTGTACTCTGCTGTCCTCTAGAGGCTTTGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: VWPGSPNSLPLR*CTLLSSRGFVC Trigger: ACAAACAAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGGCCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR GCA 72 bp | TGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGCTATaGTCAACAGCTTTTGAGCCTTATCATTACTATAAT | + |
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Preference number: 3 (lower is better) Translates to: CRLSLKSEAPWL*STAFEPYHYYN Trigger: ATTATAGTAATGATAAGGCTCAAAAGCTGTTGAGCATAGCCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CAA 90 bp | GGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCAGAGCTCTGTGTGATTaGATTTGTCTCATAAATGAC | + |
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Preference number: 3 (lower is better) Translates to: GSPNSLPLRCCTLLSSRGRALCD*ICLIND Trigger: GTCATTTATGAGACAAATCAAATCACACAGAGCTCT...GCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 72 bp | GACCAAATGGCTTTAATATTATTTTGCAGTTTCCAGTaGTGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DQMALILFCSFQ*CRMQLQLCFKE Trigger: CTCCTTGAAACACAACTGCAGCTGCATTCTGCATCACTGGAAACTGCAAAATAATATTAAAGCCATTTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTCTGGTGTGGTGGGTTTaGAAACTTGAAAATTCACCA | + |
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Preference number: 3 (lower is better) Translates to: FNWHCGLLKGTRTVYLNILVWWV*KLENSP Trigger: TGGTGAATTTTCAAGTTTCAAAACCCACCACACCAG...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 72 bp | TTGATGTCAAAGTTTCAAGTGGGGGTTGACAGATCATaGTTATGTGTTCTTTTTACTGAGTTGCTACGATCA | + |
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Preference number: 3 (lower is better) Translates to: LMSKFQVGVDRS*LCVLFTELLRS Trigger: TGATCGTAGCAACTCAGTAAAAAGAACACATAATCATGATCTGTCAACCCCCACTTGAAACTTTGACATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| 3UTR TCA 72 bp | TTTATCTTACCTGGCAAAAGGAATCCTGTGTCTTTCTaGCTCTTAGAAAATTCTGTGGCTTGTCTTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: FILPGKRNPVSF*LLENSVACLSF Trigger: GAATGAAAGACAAGCCACAGAATTTTCTAAGAGTCAGAAAGACACAGGATTCCTTTTGCCAGGTAAGATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | GGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACCTCACGCCACAGGGTCATTaGTGCGGGTCCCCACGATGC | + |
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Preference number: 4 (lower is better) Translates to: GPVCSLSGHSVLRPRCHLTPQGH*CGSPRC Trigger: GCATCGTGGGGACCCGCAGCAATGACCCTGTGGCGT...GAGGTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | CAGGGGGCTCCTGGGCCGTCTCTGCCAGTGTCACACTGTCTGCAGCAAGGCCCGAGGCCCCGTCAGGTCTaGGAGCCTCCTCTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QGAPGPSLPVSHCLQQGPRPRQV*EPPLPH Trigger: GTGAGGAAGAGGAGGCTCGCAGACCTGACGGGGCCT...CGGGCCTTGCTGCAGACAGTGTGACACTGGCAGAGACGGCCCAGGAGCCCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR TCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACGGGTCCCCACGATGCTaGACTTCTTCACATAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHGSPRC*TSSHRS Trigger: ACTCCTATGTGAAGAAGTTCAGCATCGTGGGGACCC...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACGGATCCATTGGCTTCTaGTTGGGGACCCAGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHGSIGF*LGTQTF Trigger: AAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGATCC...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | CCTGGGCCCGTGTGCAGCCTCAGTGGACACTCAGTGCTGAGGCCCCGATGCCACTCACGATGGAGCTGCTaGCCAAGGCTTGGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: PGPVCSLSGHSVLRPRCHSRWSC*PRLGST Trigger: AGTACTACCAAGCCTTGGGCAGCAGCTCCATCGTGA...GTGGCATCGGGGCCTCAGCACTGAGTGTCCACTGAGGCTGCACACGGGCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGTCCAGTTCCTAGGGGTGCCTTGGTGGTCTaGTCCTTCTGCCTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGLHWGTRIIGRTRPVPRGALVV*SFCLRP Trigger: AGGCCTGAGGCAGAAGGATCAGACCACCAAGGCACC...CCTAGGAACTGGACGTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGTCCAGTTCCTAGGCTTCTGCCTCAGGCCTaGAGGGAGCAGTGCATTATC | + |
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Preference number: 4 (lower is better) Translates to: PGLHWGTRIIGRTRPVPRLLPQA*REQCII Trigger: GATAATGCACTGCTCCCTGCAGGCCTGAGGCAGAAG...CCTAGGAACTGGACGTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGTCCAGTTCCTAGGCATGCCCAGGATAGCTaGGATGTCACACAGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGLHWGTRIIGRTRPVPRHAQDS*DVTQFC Trigger: GCAGAACTGTGTGACATCGCAGCTATCCTGGGCATG...CCTAGGAACTGGACGTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGTCCAGTTCCTAGGCTTCTGCATATGCCTTaGGGGTGGGTATGGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: PGLHWGTRIIGRTRPVPRLLHMP*GWVWEY Trigger: ATATTCCCATACCCACCCTCAAGGCATATGCAGAAG...CCTAGGAACTGGACGTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | ACACTCAGTGCTGAGGCCCCGATGCCACCTCTAGTTACCCTGTACTGTCCATACAAAGGGGCCTGTGGGTaGCTTGGTGGTCTGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLSAEAPMPPLVTLYCPYKGACG*LGGLIL Trigger: AAGGATCAGACCACCAAGGCACCCACAGGCCCCTTT...GTATGGACAGTACAGGGTAACTAGAGGTGGCATCGGGGCCTCAGCACTGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | ACGCCAGCATTCGTCCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACCCATTTCCACTTTGTTaGCCAAAGGTTGGCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TPAFVLGSTGAHASSVEHPFPLC*PKVGSG Trigger: ACCAGAGCCAACCTTTGGGCAACAAAGTGGAAATGG...GTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGGACGAATGCTGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR GCA 90 bp | ACGCCAGCATTCGTCCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACTTAAATTCCTTCGCTTaGTTTTCCAAGTGGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TPAFVLGSTGAHASSVEHLNSFA*FSKWSK Trigger: TTTGGACCACTTGGAAAAGCAAGCGAAGGAATTTAA...GTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGGACGAATGCTGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR CCA 90 bp | GGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCGGCCTCCTCCAGTTCTaGCTCCAGTGTCACACTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSPNSLPLRCCTLLSSRGGLLQF*LQCHTL Trigger: GAGAGTGTGACACTGGAGCCAGAACTGGAGGAGGCC...GCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS-3UTR CCA 90 bp | GGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCCTGTGGGTGCCTTGGTaGTCTGATCCTTCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSLPLRCCTLLSSRGLWVPW*SDPSAS Trigger: TGAGGCAGAAGGATCAGACCACCAAGGCACCCACAG...GCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAACCAGAGAAGTGTTGTaGGGGAGAGCTTCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSPNSLPLRCCTLLSSRTREVL*GRASTR Trigger: CCTGGTGGAAGCTCTCCCCCACAACACTTCTCTGGT...TCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTACTGCTGGTTGCTCATaGGTGTGTGCATGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPNSLPLRCCTLLSSRGFTAGCS*VCACPG Trigger: TCCTGGGCATGCACACACTCATGAGCAACCAGCAGT...AAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CCA 90 bp | TTTGATCCTGGAATCAATTTGGCAGCTTTAATCTTGATGTCAAAGTTTCAAGTGGGCCTGTGGGTGCCTTaGTGGTCTGATCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FDPGINLAALILMSKFQVGLWVP*WSDPSA Trigger: GGCAGAAGGATCAGACCACCAAGGCACCCACAGGCC...CACTTGAAACTTTGACATCAAGATTAAAGCTGCCAAATTGATTCCAGGATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CCA 90 bp | AATAATTACCAGACTGAACTTCTGTGCCTAAAGAAAAACTTCACATTAGCCATGCGTTGTTGCTCATCATaGCGTTGGATGCCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NNYQTELLCLKKNFTLAMRCCSS*RWMPAA Trigger: GGCTGCGGGCATCCAACGCCATGATGAGCAACAACG...CATGGCTAATGTGAAGTTTTTCTTTAGGCACAGAAGTTCAGTCTGGTAATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR GCA 90 bp | AATAATTACCAGACTGAACTTCTGTGCCTAAAGAAAAACTTCACATTAGCCATGCAGGGCTTCTGCATATaGCTTGAGGGTGGGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNYQTELLCLKKNFTLAMQGFCI*LEGGYG Trigger: CCCATACCCACCCTCAAGGCATATGCAGAAGCCCTG...CATGGCTAATGTGAAGTTTTTCTTTAGGCACAGAAGTTCAGTCTGGTAATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR GCA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTTTGCTCATGAGTGTGTaGATGCCCAGGATAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FNWHCGLLKGTRTVYLNILLMSV*MPRIAA Trigger: CGCAGCTATCCTGGGCATGCACACACTCATGAGCAA...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| 3UTR CAA 72 bp | GGGTTTGATCCTGGAATCAATTTGGCAGCTTTAATCTaGATGTCAAAGTTTCAAGTGGGGGTTGACAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GFDPGINLAALI*MSKFQVGVDRS Trigger: TGATCTGTCAACCCCCACTTGAAACTTTGACATCAAGATTAAAGCTGCCAAATTGATTCCAGGATCAAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CCA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTGCTTGCTTTTCCAAGTaGTCCAAAAGCTCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNWHCGLLKGTRTVYLNIACFSK*SKSSSL Trigger: AAGAGAGGAGCTTTTGGACCACTTGGAAAAGCAAGC...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR TCA 90 bp | TTTGATCCTGGAATCAATTTGGCAGCTTTAATCTTGATGTCAAAGTTTCAAGTGTTCCTCTACGTCTGTTaGATTTGGTTCTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDPGINLAALILMSKFQVFLYVC*IWFFIR Trigger: CCTGATGAAGAACCAAATTCAACAGACGTAGAGGAA...CACTTGAAACTTTGACATCAAGATTAAAGCTGCCAAATTGATTCCAGGATCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTAAGTGCACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTGGGCCGTAACGCCACAGGGTCATaGCTGCGGGTCCCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: VVSAPRPQSRAARGLLGRNATGS*LRVPTM Trigger: CATCGTGGGGACCCGCAGCAATGACCCTGTGGCGTT...ACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTGCACTTACAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTAAGTGCACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTGGGCCGTTCGACCAGAGAAGTGTaGTGGGGGAGAGCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VVSAPRPQSRAARGLLGRSTREV*WGRAST Trigger: GGTGGAAGCTCTCCCCCACAACACTTCTCTGGTCGA...ACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTGCACTTACAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTGCACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTGGGCCGTCTCTGCCTTGTATTGTGTGGGTTaGATCACACTGTTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VHLGPKAGPPGGSWAVSALYCVG*ITLLSP Trigger: GGGGCTCAACAGTGTGATCAAACCCACACAATACAA...GGCAGAGACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTGCACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTGGGCCGTCTCTGCCTCTAGTTCTGGGTCATaGTTCTTTATTCGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLGPKAGPPGGSWAVSASSSGS*FFIRSS Trigger: GCTGGAGCGAATAAAGAACAATGACCCAGAACTAGA...GGCAGAGACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTAAGTGCACCTAGGCCCCAAAGCAGGGCCGCCAGGGGGCTCCTGGGCCGTATCTCCATTTCCACTTaGTTGCCCAAAGGTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSAPRPQSRAARGLLGRISIST*LPKGWL Trigger: GAGCCAACCTTTGGGCAACAAAGTGGAAATGGAGAT...ACGGCCCAGGAGCCCCCTGGCGGCCCTGCTTTGGGGCCTAGGTGCACTTACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS GCA 90 bp | CTAGACACCGCTGCGGCACTTGGGGATAATAGGCCCCGTCAGGTCTaGGAGCCTCCTCTTCCTCACAAGGTCGTTGTTGCTCATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDTAAALGDNRPRQV*EPPLPHKVVVAHHG Trigger: GCCATGATGAGCAACAACGACCTTGTGAGGAAGAGGAGGCTCGCAGACCTGACGGGGCCTATTATCCCCAAGTGCCGCAGCGGTGTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGTCCAGTTCCTAGGTCCATTGGCTTCTGCTaGGGGACCCAGACCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLHWGTRIIGRTRPVPRSIGFC*GTQTFP Trigger: AGGAAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGA...CCTAGGAACTGGACGTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CCA 90 bp | GGTTGGCTCTGGTTATCGATTTTCAGCTCGACCAGAGAAGTGTTGTaGGGGAGAGCTTCCACCAGGCGCAGGATCCCAGCTCCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWLWLSIFSSTREVL*GRASTRRRIPAPEM Trigger: CATCTCTGGAGCTGGGATCCTGCGCCTGGTGGAAGCTCTCCCCCACAACACTTCTCTGGTCGAGCTGAAAATCGATAACCAGAGCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | ACGCCAGCATTCGTCCTGGGCTCCACTGGGGCACACGCATCATCGGTAGAACACGGAATATTCCGGATGTaGTTAAGATTAACCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPAFVLGSTGAHASSVEHGIFRM*LRLTSS Trigger: AGAAGAGGTTAATCTTAACAACATCCGGAATATTCC...GTGTTCTACCGATGATGCGTGTGCCCCAGTGGAGCCCAGGACGAATGCTGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | CCATACTGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGGCTTCTGCATATGCCTaGAGGGTGGGTATGGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: PYCYSSVCRLSLKSEAPWASAYA*RVGMGI Trigger: TATTCCCATACCCACCCTCAAGGCATATGCAGAAGC...CCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGACTGTTGAGCCCCTCCTaGTTCACGATGGAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGSPNSLPLRCCTLLSSRLLSPS*FTMELL Trigger: CAGCAGCTCCATCGTGAACAAGGAGGGGCTCAACAG...TCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GTCCATACTGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTAGGCACAGGCTTGTATaGTGTGGGTTTGATCACACT | + |
|
Preference number: 5 (lower is better) Translates to: VHTVTVRCAGFLLSQKPPRHRLV*CGFDHT Trigger: AGTGTGATCAAACCCACACAATACAAGCCTGTGCCT...AGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | CCATACTGTTACAGTTCGGTGTGCAGGCTTTCTCTTAAGTCAGAAGCCCCCTGGAGGGTCTTCAGCACCTaGTTCACTTTCAGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PYCYSSVCRLSLKSEAPWRVFST*FTFSIS Trigger: TGAAATGCTGAAAGTGAACAAGGTGCTGAAGACCCT...CCAGGGGGCTTCTGACTTAAGAGAAAGCCTGCACACCGAACTGTAACAGTATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS GCA 90 bp | CACGATGCTGAACTTCTTCACATAGGAGTTCTCTTTCAGGGCTTCTaGATATGCCTTGAGGGTGGGTATGGGAATATTCCGGATGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HDAELLHIGVLFQGF*ICLEGGYGNIPDVV Trigger: AACAACATCCGGAATATTCCCATACCCACCCTCAAGGCATATGCAGAAGCCCTGAAAGAGAACTCCTATGTGAAGAAGTTCAGCATCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTGGTTTGATCACACTGTaGAGCCCCTCCTTGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SPNSLPLRCCTLLSSRGFGLITL*SPSLFT Trigger: CGTGAACAAGGAGGGGCTCAACAGTGTGATCAAACC...AAAGCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCCTTAAATTCCTTCGCTaGCTTTTCCAAGTGGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSPNSLPLRCCTLLSSRGLKFLR*LFQVVQ Trigger: TTGGACCACTTGGAAAAGCAAGCGAAGGAATTTAAG...GCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | AATAATTACCAGACTGAACTTCTGTGCCTAAAGAAAAACTTCACATTAGCCATGGCTGCTGCCCAAGGCTaGGTAGTACTGCTGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNYQTELLCLKKNFTLAMAAAQG*VVLLVA Trigger: AGCAACCAGCAGTACTACCAAGCCTTGGGCAGCAGC...CATGGCTAATGTGAAGTTTTTCTTTAGGCACAGAAGTTCAGTCTGGTAATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | GGATCTCCTAATTCCTTACCATTAAGATGCTGTACTCTGCTGTCCTCTAGAGGCTTTCCTCTACGTCTGTaGAATTTGGTTCTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPNSLPLRCCTLLSSRGFPLRL*NLVLHQ Trigger: CTGATGAAGAACCAAATTCAACAGACGTAGAGGAAA...GCCTCTAGAGGACAGCAGAGTACAGCATCTTAATGGTAAGGAATTAGGAGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | AATAATTACCAGACTGAACTTCTGTGCCTAAAGAAAAACTTCACATTAGCCATGTCATCAGGCACAGGCTaGTATTGTGTGGGTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: NNYQTELLCLKKNFTLAMSSGTG*YCVGLI Trigger: GATCAAACCCACACAATACAAGCCTGTGCCTGATGA...CATGGCTAATGTGAAGTTTTTCTTTAGGCACAGAAGTTCAGTCTGGTAATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTCTACGTCTGTTGAATTaGGTTCTTCATCAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FNWHCGLLKGTRTVYLNILRLLN*VLHQAQ Trigger: CTGTGCCTGATGAAGAACCAAATTCAACAGACGTAG...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTGTATTTGAACATTTTTGTTGCCCAAAGGTaGGCTCTGGTTATCGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FNWHCGLLKGTRTVYLNIFVAQR*ALVIDF Trigger: AAAATCGATAACCAGAGCCAACCTTTGGGCAACAAA...AATGTTCAAATACACTGTTCTTGTGCCTTTTAATAGACCACAGTGCCAGTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CCA 72 bp | GCCTCCTCTTCCTCACAAGGTCGTTGTTGCTCATCATaGCGTTGGATGCCCGCAGCCGGGGCCCCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSQGRCCSS*RWMPAAGAPAG Trigger: CCCAGCAGGGGCCCCGGCTGCGGGCATCCAACGCCATGATGAGCAACAACGACCTTGTGAGGAAGAGGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS GCA 72 bp | GGTCTGCGAGCCTCCTCTTCCTCACAAGGTCGTTGTTaGTCATCATGGCGTTGGATGCCCGCAGCCGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLRASSSSQGRC*SSWRWMPAAGA Trigger: GGCCCCGGCTGCGGGCATCCAACGCCATGATGAGCAACAACGACCTTGTGAGGAAGAGGAGGCTCGCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS GCA 72 bp | GCTGCGGCACTTGGGGATAATAGGCCCCGTCAGGTCTaGGAGCCTCCTCTTCCTCACAAGGTCGTTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAALGDNRPRQV*EPPLPHKVVVA Trigger: AGCAACAACGACCTTGTGAGGAAGAGGAGGCTCGCAGACCTGACGGGGCCTATTATCCCCAAGTGCCGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 90 bp | CCTCCAGTTCTGGCTCCAGTGTCACACTCTCCAGCACGGGATCCATaGGCTTCTGCTTGGGGACCCAGACCTTTCCTCGTTTCTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPVLAPVSHSPARDP*ASAWGPRPFLVSPL Trigger: CAGGGGAGAAACGAGGAAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGATCCCGTGCTGGAGAGTGTGACACTGGAGCCAGAACTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 72 bp | GTCACACTCTCCAGCACGGGATCCATTGGCTTCTGCTaGGGGACCCAGACCTTTCCTCGTTTCTCCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VTLSSTGSIGFC*GTQTFPRFSPV Trigger: CACAGGGGAGAAACGAGGAAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGATCCCGTGCTGGAGAGTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS GCA 72 bp | AGTGTCACACTCTCCAGCACGGGATCCATTGGCTTCTaGTTGGGGACCCAGACCTTTCCTCGTTTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVTLSSTGSIGF*LGTQTFPRFSP Trigger: AGGGGAGAAACGAGGAAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGATCCCGTGCTGGAGAGTGTGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CCA 72 bp | TCACACTCTCCAGCACGGGATCCATTGGCTTCTGCTTaGGGACCCAGACCTTTCCTCGTTTCTCCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SHSPARDPLASA*GPRPFLVSPLC Trigger: ACACAGGGGAGAAACGAGGAAAGGTCTGGGTCCCCAAGCAGAAGCCAATGGATCCCGTGCTGGAGAGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 90 bp | ACTGTTGAGCCCCTCCTTGTTCACGATGGAGCTGCTGCCCAAGGCTaGGTAGTACTGCTGGTTGCTCATGAGTGTGTGCATGCCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TVEPLLVHDGAAAQG*VVLLVAHECVHAQD Trigger: ATCCTGGGCATGCACACACTCATGAGCAACCAGCAGTACTACCAAGCCTTGGGCAGCAGCTCCATCGTGAACAAGGAGGGGCTCAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 90 bp | AAAGGTTGGCTCTGGTTATCGATTTTCAGCTCGACCAGAGAAGTGTaGTGGGGGAGAGCTTCCACCAGGCGCAGGATCCCAGCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KGWLWLSIFSSTREV*WGRASTRRRIPAPE Trigger: CTCTGGAGCTGGGATCCTGCGCCTGGTGGAAGCTCTCCCCCACAACACTTCTCTGGTCGAGCTGAAAATCGATAACCAGAGCCAACCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CCA 72 bp | TGGTTATCGATTTTCAGCTCGACCAGAGAAGTGTTGTaGGGGAGAGCTTCCACCAGGCGCAGGATCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WLSIFSSTREVL*GRASTRRRIPA Trigger: AGCTGGGATCCTGCGCCTGGTGGAAGCTCTCCCCCACAACACTTCTCTGGTCGAGCTGAAAATCGATAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 72 bp | CCCCTCCTTGTTCACGATGGAGCTGCTGCCCAAGGCTaGGTAGTACTGCTGGTTGCTCATGAGTGTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLVHDGAAAQG*VVLLVAHECVH Trigger: ATGCACACACTCATGAGCAACCAGCAGTACTACCAAGCCTTGGGCAGCAGCTCCATCGTGAACAAGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 72 bp | CTCTGGTTATCGATTTTCAGCTCGACCAGAGAAGTGTaGTGGGGGAGAGCTTCCACCAGGCGCAGGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWLSIFSSTREV*WGRASTRRRIP Trigger: TGGGATCCTGCGCCTGGTGGAAGCTCTCCCCCACAACACTTCTCTGGTCGAGCTGAAAATCGATAACCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 90 bp | GTTTCCTCTACGTCTGTTGAATTTGGTTCTTCATCAGGCACAGGCTaGTATTGTGTGGGTTTGATCACACTGTTGAGCCCCTCCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSSTSVEFGSSSGTG*YCVGLITLLSPSLF Trigger: GAACAAGGAGGGGCTCAACAGTGTGATCAAACCCACACAATACAAGCCTGTGCCTGATGAAGAACCAAATTCAACAGACGTAGAGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 90 bp | CTGGGTCATTGTTCTTTATTCGCTCCAGCGTTTCCTCTACGTCTGTaGAATTTGGTTCTTCATCAGGCACAGGCTTGTATTGTGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGHCSLFAPAFPLRL*NLVLHQAQACIVWV Trigger: AACCCACACAATACAAGCCTGTGCCTGATGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAGCGAATAAAGAACAATGACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CCA 72 bp | TTCACGATCTCCATTTCCACTTTGTTGCCCAAAGGTTaGCTCTGGTTATCGATTTTCAGCTCGACCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FTISISTLLPKG*LWLSIFSSTRE Trigger: TTCTCTGGTCGAGCTGAAAATCGATAACCAGAGCCAACCTTTGGGCAACAAAGTGGAAATGGAGATCGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
||
| CDS CAA 72 bp | GGGAACCAGATCTTCTCGGTCCTTAAATTCCTTCGCTaGCTTTTCCAAGTGGTCCAAAAGCTCCTCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GNQIFSVLKFLR*LFQVVQKLLSF Trigger: AAAAGAGAGGAGCTTTTGGACCACTTGGAAAAGCAAGCGAAGGAATTTAAGGACCGAGAAGATCTGGTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS CAA 72 bp | TGTTCTTTATTCGCTCCAGCGTTTCCTCTACGTCTGTaGAATTTGGTTCTTCATCAGGCACAGGCTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: CSLFAPAFPLRL*NLVLHQAQACI Trigger: AATACAAGCCTGTGCCTGATGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAGCGAATAAAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS CAA 72 bp | TATGCCTTGAGGGTGGGTATGGGAATATTCCGGATGTaGTTAAGATTAACCTCTTCTAGTTCTGGGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: YALRVGMGIFRM*LRLTSSSSGSL Trigger: CAATGACCCAGAACTAGAAGAGGTTAATCTTAACAACATCCGGAATATTCCCATACCCACCCTCAAGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS CAA 72 bp | ATGTTGTTAAGATTAACCTCTTCTAGTTCTGGGTCATaGTTCTTTATTCGCTCCAGCGTTTCCTCTACGTCT | + |
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Preference number: 6 (lower is better) Translates to: MLLRLTSSSSGS*FFIRSSVSSTS Trigger: AGACGTAGAGGAAACGCTGGAGCGAATAAAGAACAATGACCCAGAACTAGAAGAGGTTAATCTTAACAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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| CDS CAA 90 bp | ATATTCCGGATGTTGTTAAGATTAACCTCTTCTAGTTCTGGGTCATaGTTCTTTATTCGCTCCAGCGTTTCCTCTACGTCTGTTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: IFRMLLRLTSSSSGS*FFIRSSVSSTSVEF Trigger: AAATTCAACAGACGTAGAGGAAACGCTGGAGCGAATAAAGAACAATGACCCAGAACTAGAAGAGGTTAATCTTAACAACATCCGGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107773.3 |
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