Pregenerated sensors for TMIGD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074344Ensembl transcript IDs: ENSMUST00000010279.10, ENSMUST00000198080.5, ENSMUST00000199977.2, ENSMUST00000200482.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACTTCAAATCCTTGCCAAAGTTATGGAGACCATAGACGGGCCTTaGCTTGCTTGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: ELQILAKVMETIDGP*LACGFLLMLLPVTS Trigger: AGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGGATTTGAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR GCA 90 bp | TCAAATCCTTGCCAAAGTTATGGAGACCATAGACGGGCCTTGGCTTaGTTGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTCTCTATT | + |
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Preference number: 1 (lower is better) Translates to: SNPCQSYGDHRRALA*LWVSTDAFASNFSI Trigger: AATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGGATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR TCA 90 bp | CCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACAAGTaGCTGATTATAAAGATGATCCCCAAACTGGTAATCAGTATACAA | + |
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Preference number: 1 (lower is better) Translates to: PVTSLFLWLRLPLDK*LIIKMIPKLVISIQ Trigger: TTGTATACTGATTACCAGTTTGGGGATCATCTTTATAATCAGTCACTTGTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CAA 90 bp | ACCATAGACGGGCCTTGGCTTGCTTGTGGGTTTCTACTGATGCTTTaGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TIDGPWLACGFLLML*PVTSLFLWLRLPLD Trigger: GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CAA 90 bp | AGAACTTCAAATCCTTGCCAAAGTTATGGAGACCATAGACGGGCCTaGGCTTGCTTGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: RTSNPCQSYGDHRRA*ACLWVSTDAFASNF Trigger: GAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGGATTTGAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGACACGTGGAAAGAACTTCAAATCCTTGCCAAAGTTATGGAGACCATAGACCTTCCTCTGGACAAGTaGCTGATTATAAAGATGATC | + |
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Preference number: 2 (lower is better) Translates to: QDTWKELQILAKVMETIDLPLDK*LIIKMI Trigger: GATCATCTTTATAATCAGTCACTTGTCCAGAGGAAG...GTCTATGGTCTCCATAACTTTGGCAAGGATTTGAAGTTCTTTCCACGTGTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CAA 90 bp | TTGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTCTCTATTTCTTaGGCTTCGCCTTCCTCTGGACAAGTGACTGATTATAAAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: LWVSTDAFASNFSIS*ASPSSGQVTDYKDD Trigger: ATCATCTTTATAATCAGTCACTTGTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CCA 72 bp | ATCCTTGCCAAAGTTATGGAGACCATAGACGGGCCTTaGCTTGCTTGTGGGTTTCTACTGATGCTTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: ILAKVMETIDGP*LACGFLLMLLP Trigger: TGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CCA 72 bp | AGTTATGGAGACCATAGACGGGCCTTGGCTTGCTTGTaGGTTTCTACTGATGCTTTTGCCAGTAACTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SYGDHRRALACL*VSTDAFASNFS Trigger: AGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR TCA 72 bp | TCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTaGGTCAGGACACGTGGAAAGAACTTCAAATCCTTG | + |
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Preference number: 3 (lower is better) Translates to: SSVTHVQFKPFP*VRTRGKNFKSL Trigger: CAAGGATTTGAAGTTCTTTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199977.2 |
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| 3UTR TCA 72 bp | TCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACAAGTaGCTGATTATAAAGATGATCCCCAAACTGGTAATC | + |
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Preference number: 3 (lower is better) Translates to: SLFLWLRLPLDK*LIIKMIPKLVI Trigger: GATTACCAGTTTGGGGATCATCTTTATAATCAGTCACTTGTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR CCA 90 bp | CGGGCCTTGGCTTGCTTGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTCTCTCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: RALACLWVSTDAFASNFSLAKSR*IPHQYQ Trigger: CTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAG...AGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: IFSHTCSVQAIPLSQDTWLAKSR*IPHQYQ Trigger: CTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAG...CCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGTGTTGCACGAGTCCCTaGAGTAGCCACGGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVCCTSP*SSHGTS Trigger: ACTGGTGCCGTGGCTACTTCAGGGACTCGTGCAACA...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGTTGCACGAGTCCCTaGAGTAGCCACGGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTCCTSP*SSHGTS Trigger: ACTGGTGCCGTGGCTACTTCAGGGACTCGTGCAACA...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | CTGATGCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACTGTTGCACGAGTCCCTaGAGTAGCCACGGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: LMLLPVTSLFLWLRLPLDCCTSP*SSHGTS Trigger: ACTGGTGCCGTGGCTACTTCAGGGACTCGTGCAACA...GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR TCA 90 bp | CCTTGCCAAAGTTATGGAGACCATAGACGGGCCTTGGCTTGCTTGTGGGTTTCTGAATGGACATTCAGATaGAAAGCCATTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCQSYGDHRRALACLWVSEWTFR*KAIGPV Trigger: GACCGGGCCAATGGCTTTTCATCTGAATGTCCATTC...AGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR CCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVLAKSR*IPHQYQ Trigger: CTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAG...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAACACGGCACCAGTACTTaGTGTGGTCCTTGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LQSHMFSSSHSLESGHVEHGTST*CGPCSR Trigger: CCTACTACAAGGACCACACCAAGTACTGGTGCCGTG...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACTGTTGCACGAGTCCCTaGAGTAGCCACGGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDCCTSP*SSHGTS Trigger: ACTGGTGCCGTGGCTACTTCAGGGACTCGTGCAACA...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDLAKSR*IPHQYQ Trigger: CTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAG...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | TCTTTGGCTTCGCCTTCCTCTGGACAAGTGACTGATTATAAAGATGATCCCCAACACGGCACCAGTACTTaGTGTGGTCCTTGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SLASPSSGQVTDYKDDPQHGTST*CGPCSR Trigger: CCTACTACAAGGACCACACCAAGTACTGGTGCCGTG...TTGGGGATCATCTTTATAATCAGTCACTTGTCCAGAGGAAGGCGAAGCCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR TCA 90 bp | ATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGCTCCAGCTCAACACCTaGTTTCACCTTTTCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: IFSHTCSVQAIPLSQDTWLQLNT*FHLFIH Trigger: ATGGATGAAAAGGTGAAATCAGGTGTTGAGCTGGAG...CCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR GCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGATCATAGACACAGACTaGAGAAGCTGTCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVIIDTD*RSCLQL Trigger: GAGCTGGAGACAGCTTCTGCAGTCTGTGTCTATGAT...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAAGAACTTCAAATCACGGCACCAGTACTTaGTGTGGTCCTTGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: MFSSSHSLESGHVERTSNHGTST*CGPCSR Trigger: CCTACTACAAGGACCACACCAAGTACTGGTGCCGTG...ATTTGAAGTTCTTTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | TCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAAGAACTTCAAATCCTTAATCCATGTCATCTCTaGCCAAGTCCCGCTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: SVQAIPLSQDTWKELQILNPCHL*PSPAGY Trigger: GTATCCAGCGGGACTTGGCCAGAGATGACATGGATT...AAGGATTTGAAGTTCTTTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | TTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACAAGTGACTAATCCATGTCATCTCTaGCCAAGTCCCGCTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: FASNFSISLASPSSGQVTNPCHL*PSPAGY Trigger: GTATCCAGCGGGACTTGGCCAGAGATGACATGGATT...AGTCACTTGTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAACAGATGAAAAGCCATTaGCCCGGTCTTCTCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: LQSHMFSSSHSLESGHVEQMKSH*PGLLYC Trigger: ACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTG...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAACTTCTCTATTTCTTTaGCTTCGCCTTCCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LQSHMFSSSHSLESGHVETSLFL*LRLPLD Trigger: GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGT...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGACTTCTCTATTTCTTTaGCTTCGCCTTCCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: IFSHTCSVQAIPLSQDTWTSLFL*LRLPLD Trigger: GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGT...CCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAGCCTTGGCTTGCTTGTaGGTTTCTACTGATGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LQSHMFSSSHSLESGHVEALACL*VSTDAF Trigger: AAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGC...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| 3UTR CAA 72 bp | GGGCCTTGGCTTGCTTGTGGGTTTCTACTGATGCTTTaGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPWLACGFLLML*PVTSLFLWLRL Trigger: AAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| 3UTR CAA 72 bp | CAAAGTTATGGAGACCATAGACGGGCCTTGGCTTGCTaGTGGGTTTCTACTGATGCTTTTGCCAGTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: QSYGDHRRALAC*WVSTDAFASNF Trigger: GAAGTTACTGGCAAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR TCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGTCACCTTTTCATCCATaGCCATGGCATCGGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVSPFHP*PWHRKR Trigger: TCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGA...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTCACCTTTTCATCCATaGCCATGGCATCGGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTSPFHP*PWHRKR Trigger: TCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGA...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACAATCCATGTCATCTCTaGCCAAGTCCCGCTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDNPCHL*PSPAGY Trigger: GTATCCAGCGGGACTTGGCCAGAGATGACATGGATT...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGAATCCATGTCATCTCTaGCCAAGTCCCGCTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQNPCHL*PSPAGY Trigger: GTATCCAGCGGGACTTGGCCAGAGATGACATGGATT...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGCAGATGAAAAGCCATTaGCCCGGTCTTCTCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTQMKSH*PGLLYC Trigger: ACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTG...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CCA 90 bp | CTGATGCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACCAGATGAAAAGCCATTaGCCCGGTCTTCTCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: LMLLPVTSLFLWLRLPLDQMKSH*PGLLYC Trigger: ACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTG...GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR CCA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGGCCTTGGCTTGCTTGTaGGTTTCTACTGATGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTALACL*VSTDAF Trigger: AAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGC...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR GCA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGATCATAGACACAGACTaGAGAAGCTGTCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQIIDTD*RSCLQL Trigger: GAGCTGGAGACAGCTTCTGCAGTCTGTGTCTATGAT...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTACTGATGCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCATCATAGACACAGACTaGAGAAGCTGTCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VSTDAFASNFSISLASPSIIDTD*RSCLQL Trigger: GAGCTGGAGACAGCTTCTGCAGTCTGTGTCTATGAT...GGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS-3UTR TCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACTCACCTTTTCATCCATaGCCATGGCATCGGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDSPFHP*PWHRKR Trigger: TCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGA...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR TCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGCTTCCTCTGGACAAGTaGCTGATTATAAAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVLPLDK*LIIKMI Trigger: GATCATCTTTATAATCAGTCACTTGTCCAGAGGAAG...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGCAGATGAAAAGCCATTaGCCCGGTCTTCTCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQQMKSH*PGLLYC Trigger: ACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTG...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACTTCTCTATTTCTTTaGCTTCGCCTTCCTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDTSLFL*LRLPLD Trigger: GTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGT...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACGCCTTGGCTTGCTTGTaGGTTTCTACTGATGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDALACL*VSTDAF Trigger: AAAAGCATCAGTAGAAACCCACAAGCAAGCCAAGGC...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTACTGATGCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTTCACCTTTTCATCCATaGCCATGGCATCGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLMLLPVTSLFLWLRLPSPFHP*PWHRKR Trigger: TCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGA...AGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
||
| CDS-3UTR CCA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGATAGTGATAATGAGTTaGTTTCCTGTATCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQSHMFSSSHSLESGHVIVIMS*FPVSFR Trigger: CCTGAAGGATACAGGAAACCAACTCATTATCACTAT...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGCTTCCTCTGGACAAGTaGCTGATTATAAAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQLPLDK*LIIKMI Trigger: GATCATCTTTATAATCAGTCACTTGTCCAGAGGAAG...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACATAGTGATAATGAGTTaGTTTCCTGTATCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDIVIMS*FPVSFR Trigger: CCTGAAGGATACAGGAAACCAACTCATTATCACTAT...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CCA 90 bp | ACAATCAGCTGTGTAAAATCCATGTCATCTCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAGCCTGTGTCCTCCTTGACCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TISCVKSMSSLAKSR*IPHQYQPVSSLTRQ Trigger: CTGCCTGGTCAAGGAGGACACAGGCTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAGAGATGACATGGATTTTACACAGCTGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCAAAGTTATGGAGACCATAGACGGGCCTTGGCTTGCTTGTGGGTTTCTCAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCQSYGDHRRALACLWVSQPVSS*TRQDIV Trigger: CACTATATCCTGCCTGGTCAAGGAGGACACAGGCTG...AGAAACCCACAAGCAAGCCAAGGCCCGTCTATGGTCTCCATAACTTTGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAATTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSHMFSSSHSLESGHVEFRATR*VLLGVK Trigger: CTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAA...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAACAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSHMFSSSHSLESGHVEQPVSS*TRQDIV Trigger: CACTATATCCTGCCTGGTCAAGGAGGACACAGGCTG...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGGGAGCCCTCTGCCTTTaGGACAGCTTTGGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTGALCL*DSFGSP Trigger: AGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCC...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAACGGGCCTTGGCTTGCTaGTGGGTTTCTACTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQSHMFSSSHSLESGHVERALAC*WVSTDA Trigger: AGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCG...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CCA 90 bp | AGTATACAAATGATCAGAATGGACATTCGGGAGCCCTCTGCCTTTTaGACAGCTTTGGAAGCCCTACAGCTCCGGGTCCTATTGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQMIRMDIREPSAF*TALEALQLRVLLPE Trigger: TTCAGGCAATAGGACCCGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCATTCTGATCATTTGTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EIFSHTCSVQAIPLSQDTFRATR*VLLGVK Trigger: CTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAA...CGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGACAAGTGTTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFASNFSISLASPSSGQVFRATR*VLLGVK Trigger: CTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAA...CACTTGTCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
||
| CDS-3UTR CAA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGCAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLQSHMFSSSHSLESGHVQPVSS*TRQDIV Trigger: CACTATATCCTGCCTGGTCAAGGAGGACACAGGCTG...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAAGAACTTCAAATCCTTGGAGCCCTCTGCCTTTaGGACAGCTTTGGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVQAIPLSQDTWKELQILGALCL*DSFGSP Trigger: AGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCC...AAGGATTTGAAGTTCTTTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGCGGGCCTTGGCTTGCTaGTGGGTTTCTACTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLQSHMFSSSHSLESGHVRALAC*WVSTDA Trigger: AGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCG...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS TCA 90 bp | GGCATCATAGACACAGACTGCAGAAGCTGTCTCCAGCTCAACACCTaGTTTCACCTTTTCATCCATGACCATGGCATCGGAAAAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIIDTDCRSCLQLNT*FHLFIHDHGIGKES Trigger: GCTCTCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGAAATCAGGTGTTGAGCTGGAGACAGCTTCTGCAGTCTGTGTCTATGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS GCA 90 bp | GGTAATCAGTATACAAATGATCAGAATGGACATTCGGGAGCCCTCTaGCTTTTGGACAGCTTTGGAAGCCCTACAGCTCCGGGTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: GNQYTNDQNGHSGAL*LLDSFGSPTAPGPI Trigger: AATAGGACCCGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCATTCTGATCATTTGTATACTGATTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGAAGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQSHMFSSSHSLESGHVEARSSL*SVTISC Trigger: ACAGCTGATTGTGACTGACAATAGAGAAGACCGGGC...TTCCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGGAGCCCTCTGCCTTTaGGACAGCTTTGGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQGALCL*DSFGSP Trigger: AGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCC...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACTTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDFRATR*VLLGVK Trigger: CTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAA...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGCAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VKEIFSHTCSVQAIPLSQQPVSS*TRQDIV Trigger: CACTATATCCTGCCTGGTCAAGGAGGACACAGGCTG...CTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | AATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLQSHMFSSSHSLESGHVARSSL*SVTISC Trigger: ACAGCTGATTGTGACTGACAATAGAGAAGACCGGGC...CACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACCGGGCCTTGGCTTGCTaGTGGGTTTCTACTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEIFSHTCSVQAIPLSQDRALAC*WVSTDA Trigger: AGCATCAGTAGAAACCCACAAGCAAGCCAAGGCCCG...GTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS-3UTR CAA 90 bp | ACTGATGCTTTTGCCAGTAACTTCTCTATTTCTTTGGCTTCGCCTTCCTCTGGAGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TDAFASNFSISLASPSSGARSSL*SVTISC Trigger: ACAGCTGATTGTGACTGACAATAGAGAAGACCGGGC...TCCAGAGGAAGGCGAAGCCAAAGAAATAGAGAAGTTACTGGCAAAAGCATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
||
| CDS-3UTR CAA 90 bp | ATCTTCAGTCACACATGTTCAGTTCAAGCCATTCCCTTGAGTCAGGACACGTGGTATAGTGATAATGAGTaGGTTTCCTGTATCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFSHTCSVQAIPLSQDTWYSDNE*VSCILQ Trigger: CTGAAGGATACAGGAAACCAACTCATTATCACTATA...CCACGTGTCCTGACTCAAGGGAATGGCTTGAACTGAACATGTGTGACTGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CCA 72 bp | TGGACATTCGGGAGCCCTCTGCCTTTTGGACAGCTTTaGAAGCCCTACAGCTCCGGGTCCTATTGCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WTFGSPLPFGQL*KPYSSGSYCLK Trigger: CTTCAGGCAATAGGACCCGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CAA 72 bp | ATGGACATTCGGGAGCCCTCTGCCTTTTGGACAGCTTaGGAAGCCCTACAGCTCCGGGTCCTATTGCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MDIREPSAFWTA*EALQLRVLLPE Trigger: TTCAGGCAATAGGACCCGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CAA 72 bp | AATGATCAGAATGGACATTCGGGAGCCCTCTGCCTTTaGGACAGCTTTGGAAGCCCTACAGCTCCGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NDQNGHSGALCL*DSFGSPTAPGP Trigger: AGGACCCGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCATTCTGATCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CCA 72 bp | TGTGTAAAATCCATGTCATCTCTGGCCAAGTCCCGCTaGATACCACACCAGTACCAGCCTGTGTCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CVKSMSSLAKSR*IPHQYQPVSSL Trigger: CAAGGAGGACACAGGCTGGTACTGGTGTGGTATCCAGCGGGACTTGGCCAGAGATGACATGGATTTTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS CAA 90 bp | GCCAAGTCCCGCTGGATACCACACCAGTACCAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTGATAATGAGTTGGTTTCCTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: AKSRWIPHQYQPVSS*TRQDIVIMSWFPVS Trigger: GGATACAGGAAACCAACTCATTATCACTATATCCTGCCTGGTCAAGGAGGACACAGGCTGGTACTGGTGTGGTATCCAGCGGGACTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS TCA 72 bp | GACACAGACTGCAGAAGCTGTCTCCAGCTCAACACCTaGTTTCACCTTTTCATCCATGACCATGGCATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTDCRSCLQLNT*FHLFIHDHGIG Trigger: TCCGATGCCATGGTCATGGATGAAAAGGTGAAATCAGGTGTTGAGCTGGAGACAGCTTCTGCAGTCTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS GCA 72 bp | TATACAAATGATCAGAATGGACATTCGGGAGCCCTCTaGCTTTTGGACAGCTTTGGAAGCCCTACAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: YTNDQNGHSGAL*LLDSFGSPTAP Trigger: CGGAGCTGTAGGGCTTCCAAAGCTGTCCAAAAGGCAGAGGGCTCCCGAATGTCCATTCTGATCATTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CCA 72 bp | GGGTCCTATTGCCTGAAGGGTCAGATGAAAAGCCATTaGCCCGGTCTTCTCTATTGTCAGTCACAATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSYCLKGQMKSH*PGLLYCQSQSA Trigger: AGCTGATTGTGACTGACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTGACCCTTCAGGCAATAGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS CAA 72 bp | CGCTGGATACCACACCAGTACCAGCCTGTGTCCTCCTaGACCAGGCAGGATATAGTGATAATGAGTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RWIPHQYQPVSS*TRQDIVIMSWF Trigger: AAACCAACTCATTATCACTATATCCTGCCTGGTCAAGGAGGACACAGGCTGGTACTGGTGTGGTATCCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS CAA 72 bp | ATGAGTTGGTTTCCTGTATCCTTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAGGCAATAATGTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MSWFPVSFRATR*VLLGVKAIMLH Trigger: GTGCAACATTATTGCCTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAAGGATACAGGAAACCAACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS CAA 90 bp | ATAGTGATAATGAGTTGGTTTCCTGTATCCTTCAGGGCCACACGGTaGGTGCTATTAGGGGTGAAGGCAATAATGTTGCACGAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVIMSWFPVSFRATR*VLLGVKAIMLHESL Trigger: CAGGGACTCGTGCAACATTATTGCCTTCACCCCTAATAGCACCAACCGTGTGGCCCTGAAGGATACAGGAAACCAACTCATTATCACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
||
| CDS CAA 90 bp | TTGCCTGAAGGGTCAGATGAAAAGCCATTGGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGTGTAAAATCCATGTCATCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPEGSDEKPLARSSL*SVTISCVKSMSSLA Trigger: GGCCAGAGATGACATGGATTTTACACAGCTGATTGTGACTGACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTGACCCTTCAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
||
| CDS TCA 72 bp | TCTCCAGCTCAACACCTGATTTCACCTTTTCATCCATaGCCATGGCATCGGAAAAGAGAGCCAAGGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPAQHLISPFHP*PWHRKREPRRE Trigger: TTCTCTCCTTGGCTCTCTTTTCCGATGCCATGGTCATGGATGAAAAGGTGAAATCAGGTGTTGAGCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 ENSMUST00000200482.5 |
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| CDS CAA 90 bp | CAGAATGGACATTCAGATGAAAAGCCATTGGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGTGTAAAATCCATGTCATCTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QNGHSDEKPLARSSL*SVTISCVKSMSSLA Trigger: GGCCAGAGATGACATGGATTTTACACAGCTGATTGTGACTGACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTGAATGTCCATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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| CDS CAA 72 bp | GGGTCAGATGAAAAGCCATTGGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGTGTAAAATCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: GSDEKPLARSSL*SVTISCVKSMS Trigger: TGACATGGATTTTACACAGCTGATTGTGACTGACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010279.10 ENSMUST00000198080.5 ENSMUST00000199977.2 |
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| CDS CAA 72 bp | CATTCAGATGAAAAGCCATTGGCCCGGTCTTCTCTATaGTCAGTCACAATCAGCTGTGTAAAATCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: HSDEKPLARSSL*SVTISCVKSMS Trigger: TGACATGGATTTTACACAGCTGATTGTGACTGACAATAGAGAAGACCGGGCCAATGGCTTTTCATCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200482.5 |
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