Pregenerated sensors for TMIGD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020839Ensembl transcript IDs: ENSMUST00000072633.4, ENSMUST00000102495.8, ENSMUST00000142166.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTaGCATCTTAGAAACATCATTGTTCTATATTGGTCTCTGCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: DDTEHKRQFASLLAP*HLRNIIVLYWSLLR Trigger: TCGAAGCAGAGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR TCA 90 bp | TCATTGTTCTATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTaGTTTAGAGCATCCAAATGTCAGTTAATCTCCCATGTAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SLFYIGLCFESHLLH*FRASKCQLISHVEN Trigger: GTTTTCTACATGGGAGATTAACTGACATTTGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATATAGAACAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATTCGAGTCTCACCTACTaGACTGATTTAGAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: DSLHLYWLPGILETSLFYSSLTY*TDLEHP Trigger: TGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGA...ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTCTCTGCAACATACTTCAGGAGTaGCCTTACCAAAATCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LYWLPGILETSLFYIGLCNILQE*PYQNLS Trigger: AGAAAGATTTTGGTAAGGTCACTCCTGAAGTATGTT...GCAGAGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAATTTATTCCACTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCTCGAGTCTCACCTACTaGACTGATTTAGAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: TKFIPLEGMSYILRLGVPSSLTY*TDLEHP Trigger: TGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGA...GGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAGTGGAATAAATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATTTATTCCACTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCCTTCTTCACAACCTCTaGCAATTTGACAGGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TKFIPLEGMSYILRLGVPLLHNL*QFDRSE Trigger: TTCACTCCTGTCAAATTGTCAGAGGTTGTGAAGAAG...GGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAGTGGAATAAATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAAAACATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATCTTCTTCACAACCTCTaGCAATTTGACAGGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: SQNINEMTLNTRDSLHLYLLHNL*QFDRSE Trigger: TTCACTCCTGTCAAATTGTCAGAGGTTGTGAAGAAG...ATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAATGTTTTGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATAAAATCTTTCTATTCTaGACCCTTGCCCATTACACA | + |
|
Preference number: 2 (lower is better) Translates to: DSLHLYWLPGILETSLFYKIFLF*TLAHYT Trigger: TGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTT...ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATAACATACTTCAGGAGTaGCCTTACCAAAATCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QFASLLAPWHLRNIIVLYNILQE*PYQNLS Trigger: AGAAAGATTTTGGTAAGGTCACTCCTGAAGTATGTT...ATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR CAA 90 bp | ACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAATTCTATTCTGAACCCTaGCCCATTACACAGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: TLNTRDSLHLYWLPGILEFYSEP*PITQIH Trigger: ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAA...TTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR TCA 72 bp | TATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTaGTTTAGAGCATCCAAATGTCAGTTAATCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YIGLCFESHLLH*FRASKCQLISH Trigger: ATGGGAGATTAACTGACATTTGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTTTCTATTCTGAACCCTaGCCCATTACACAGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: INEMTLNTRDSLHLYWLPFYSEP*PITQIH Trigger: ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAA...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTCATCATTGTTCTATATaGGTCTCTGCTTCGAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: INEMTLNTRDSLHLYWLPHHCSI*VSASSL Trigger: GAGACTCGAAGCAGAGACCAATATAGAACAATGATG...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR CCA 72 bp | GAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTaGCATCTTAGAAACATCATTGTTCTATATTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EHKRQFASLLAP*HLRNIIVLYWS Trigger: AGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR CCA 72 bp | ATGACACTGAACACAAGAGACAGTTTGCATCTTTATTaGCTCCCTGGCATCTTAGAAACATCATTGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: MTLNTRDSLHLY*LPGILETSLFY Trigger: ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | GACATTATACAAATCGAGATGGTCTTGATGCAAAACTCTTCCCGTGTTAGGTGGCTGGCATGCTTGCAGTaGCCCGGTGATCTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: DIIQIEMVLMQNSSRVRWLACLQ*PGDLPH Trigger: GTGTGGAAGATCACCGGGCCACTGCAAGCATGCCAG...CCACCTAACACGGGAAGAGTTTTGCATCAAGACCATCTCGATTTGTATAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | GAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCTCCTCGGTGTGGTTTTaGACAGCACATTCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EHKRQFASLLAPWHLRNISSVWF*TAHSRD Trigger: ATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGA...GATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATTTATTCCACTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCCTGGCATGCTTGCAGTaGCCCGGTGATCTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: TKFIPLEGMSYILRLGVPLACLQ*PGDLPH Trigger: GTGTGGAAGATCACCGGGCCACTGCAAGCATGCCAG...GGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAGTGGAATAAATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | ATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTGATTTAGAGCATCCAAATCATTGTCACTTTCGTTaGTGGGAGAGACACAAACAG | + |
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Preference number: 4 (lower is better) Translates to: ILVSASSLTYCTDLEHPNHCHFR*WERHKQ Trigger: CTGTTTGTGTCTCTCCCATCAACGAAAGTGACAATG...ATTTGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | GTGACCTTACCAAAATCTTTCTATTCTGAACCCTTGCCCATTACACAGATCCATCACATCATTTGCGCTTaGGGGTTGGATTTCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLPKSFYSEPLPITQIHHIICA*GLDFTL Trigger: CAACGTGAAATCCAACCCTCAAGCGCAAATGATGTG...ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTTGGTAAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR GCA 90 bp | GTGACCTTACCAAAATCTTTCTATTCTGAACCCTTGCCCATTACACAGATCCATCGGTTTGGAAGCCATTaGCACTTAGAAGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VTLPKSFYSEPLPITQIHRFGSH*HLEEEE Trigger: TTCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCG...ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTTGGTAAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | TGTTCTATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTGATTTAGAGCATTTTTCAGAGATGAGCTaGCAATACAGCTGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CSILVSASSLTYCTDLEHFSEMS*QYSCRS Trigger: GGACCTACAGCTGTATTGCCAGCTCATCTCTGAAAA...ATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATATAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | TACAGACGACATTATACAAATCGAGATGGTCTTGATGCAAAACTCTTCCCGTGTGCAGGTGGAAGTCCATaGTCTCCATTTTCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: YRRHYTNRDGLDAKLFPCAGGSP*SPFSEM Trigger: CATCTCTGAAAATGGAGACCATGGACTTCCACCTGC...ACACGGGAAGAGTTTTGCATCAAGACCATCTCGATTTGTATAATGTCGTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | GACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATTCCTCGGTGTGGTTTTaGACAGCACATTCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: DSLHLYWLPGILETSLFYSSVWF*TAHSRD Trigger: ATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGA...ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | GACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATTTGGTGATGGACAACTaGAAAGACTCCCTTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DSLHLYWLPGILETSLFYLVMDN*KDSLVW Trigger: CCAGACAAGGGAGTCTTTTCAGTTGTCCATCACCAA...ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTTTGGTGATGGACAACTaGAAAGACTCCCTTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: INEMTLNTRDSLHLYWLPLVMDN*KDSLVW Trigger: CCAGACAAGGGAGTCTTTTCAGTTGTCCATCACCAA...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR GCA 90 bp | CTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCTCCTTTAGTCCCAAAAGCACATTCCAGAGATaGTTGGACACCATGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LEGMSYILRLGVPSFSPKSTFQR*LDTMLS Trigger: ACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCT...TTTGGGACTAAAGGAGGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR GCA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTCGGTTTGGAAGCCATTaGCACTTAGAAGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: INEMTLNTRDSLHLYWLPRFGSH*HLEEEE Trigger: TTCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCG...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | TACAGACGACATTATACAAATCGAGATGGTCTTGATGCAAAACTCTTCCCGTGTTTTTCCTCCACGGTTTaGAAGCCATTGCCACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: YRRHYTNRDGLDAKLFPCFSSTV*KPLPLR Trigger: TCTAAGTGGCAATGGCTTCCAAACCGTGGAGGAAAA...ACACGGGAAGAGTTTTGCATCAAGACCATCTCGATTTGTATAATGTCGTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | GTGACCTTACCAAAATCTTTCTATTCTGAACCCTTGCCCATTACACAGATCCATTTTTCCTCCACGGTTTaGAAGCCATTGCCACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: VTLPKSFYSEPLPITQIHFSSTV*KPLPLR Trigger: TCTAAGTGGCAATGGCTTCCAAACCGTGGAGGAAAA...ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTTGGTAAGGTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | GAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCTCCTTTAGTCCCAAAACATTTTCAGAGATGAGCTaGCAATACAGCTGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGMSYILRLGVPSFSPKTFSEMS*QYSCRS Trigger: GGACCTACAGCTGTATTGCCAGCTCATCTCTGAAAA...TGTTTTGGGACTAAAGGAGGGAACACCTAATCTCAGAATGTAAGACATTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR CAA 72 bp | CATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATaGTTCTATATTGGTCTCTGCTTCGAGTCTCACCTA | + |
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Preference number: 4 (lower is better) Translates to: HLYWLPGILETS*FYIGLCFESHL Trigger: TAGGTGAGACTCGAAGCAGAGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR TCA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTCATTGTCACTTTCGTTaGTGGGAGAGACACAAACAG | + |
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Preference number: 4 (lower is better) Translates to: INEMTLNTRDSLHLYWLPHCHFR*WERHKQ Trigger: CTGTTTGTGTCTCTCCCATCAACGAAAGTGACAATG...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATGCAGGTGGAAGTCCATaGTCTCCATTTTCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: QFASLLAPWHLRNIIVLYAGGSP*SPFSEM Trigger: CATCTCTGAAAATGGAGACCATGGACTTCCACCTGC...ATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR GCA 90 bp | CAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATAGCACATTCCAGAGATaGTTGGACACCATGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QFASLLAPWHLRNIIVLYSTFQR*LDTMLS Trigger: ACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCT...ATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTTTGCGCTTGAGGGTTaGATTTCACGTTGCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: QFASLLAPWHLRNIIVLYFALEG*ISRCKP Trigger: TGGTTTGCAACGTGAAATCCAACCCTCAAGCGCAAA...ATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTTCTTTAACAAGCAGGTaGAAGTCCATGGTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: INEMTLNTRDSLHLYWLPSLTSR*KSMVSI Trigger: AATGGAGACCATGGACTTCCACCTGCTTGTTAAAGA...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR CAA 72 bp | GATGACACTGAACACAAGAGACAGTTTGCATCTTTATaGGCTCCCTGGCATCTTAGAAACATCATTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: DDTEHKRQFASL*APWHLRNIIVL Trigger: TAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CCA 90 bp | TTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTTCTTTAACAAGCAGGTaGAAGTCCATGGTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LHLYWLPGILETSLFYIGSLTSR*KSMVSI Trigger: AATGGAGACCATGGACTTCCACCTGCTTGTTAAAGA...ACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| 3UTR CAA 72 bp | AACATTAATGAGATGACACTGAACACAAGAGACAGTTaGCATCTTTATTGGCTCCCTGGCATCTTAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: NINEMTLNTRDS*HLYWLPGILET Trigger: TGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR GCA 90 bp | ACAAAATTTATTCCACTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCGGTTGGATTTCACGTTaGAAACCAAACTTACATCGC | + |
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Preference number: 4 (lower is better) Translates to: TKFIPLEGMSYILRLGVPGWISR*KPNLHR Trigger: GCGATGTAAGTTTGGTTTGCAACGTGAAATCCAACC...GGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAGTGGAATAAATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS TCA 90 bp | AGAGGAGGAAAGGTAACGTTCAGCACTACTGTAACGGACACCGTCTaGTCGCGCTGTAGCTTGCAGGTAAAGCGGACTCCATTGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: RGGKVTFSTTVTDTV*SRCSLQVKRTPLSL Trigger: AAGTGACAATGGAGTCCGCTTTACCTGCAAGCTACAGCGCGATCAGACGGTGTCCGTTACAGTAGTGCTGAACGTTACCTTTCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CCA 90 bp | ATGGGCTCTGCCGGCATGACAAAAACTTTGTCTTTAACAAGCAGGTaGAAGTCCATGGTCTCCATTTTCAGAGATGAGCTGGCAATACAG | + |
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Preference number: 5 (lower is better) Translates to: MGSAGMTKTLSLTSR*KSMVSIFRDELAIQ Trigger: CTGTATTGCCAGCTCATCTCTGAAAATGGAGACCATGGACTTCCACCTGCTTGTTAAAGACAAAGTTTTTGTCATGCCGGCAGAGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS TCA 90 bp | GTCTTTAACAAGCAGGTGGAAGTCCATGGTCTCCATTTTCAGAGATaGGCTGGCAATACAGCTGTAGGTCCCATTGTCAGATTTCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: VFNKQVEVHGLHFQR*AGNTAVGPIVRFLD Trigger: GTCAAGAAATCTGACAATGGGACCTACAGCTGTATTGCCAGCTCATCTCTGAAAATGGAGACCATGGACTTCCACCTGCTTGTTAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | ATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTGATTTAGAGCATCCAAATACGGTTTGGAAGCCATaGCCACTTAGAAGAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ILVSASSLTYCTDLEHPNTVWKP*PLRRGG Trigger: TCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCGT...ATTTGGATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS CCA 90 bp | CCAAGGCGCTGTTGTTTTTATACCACATCATTTGCGCTTGAGGGTTaGATTTCACGTTGCAAACCAAACTTACATCGCTGTTTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PRRCCFYTTSFALEG*ISRCKPNLHRCFPP Trigger: TGGAGGAAAACAGCGATGTAAGTTTGGTTTGCAACGTGAAATCCAACCCTCAAGCGCAAATGATGTGGTATAAAAACAACAGCGCCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTGATTTAGAGCATCCACATCATTTGCGCTaGAGGGTTGGATTTCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: CSILVSASSLTYCTDLEHPHHLR*RVGFHV Trigger: AACGTGAAATCCAACCCTCAAGCGCAAATGATGTGG...ATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATATAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS GCA 90 bp | AAGTTCTTCATCCTCGGTGTGGTTTTGAACAGCACATTCCAGAGATaGTTGGACACCATGTTGAGTGTCCAGAATATAGTTCTCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KFFILGVVLNSTFQR*LDTMLSVQNIVLSS Trigger: AGAACTGAGAACTATATTCTGGACACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGATGAAGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS-3UTR CAA 90 bp | CTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTCTCTGCCAGTTAAAACAGAGCTaGTTCTCCCCTGTGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LYWLPGILETSLFYIGLCQLKQS*FSPVAK Trigger: CTTTGCCACAGGGGAGAACAAGCTCTGTTTTAACTG...GCAGAGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | TACAGACGACATTATACAAATCGAGATGGTCTTGATGCAAAACTCTTCCCGTGTCAGTTAAAACAGAGCTaGTTCTCCCCTGTGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: YRRHYTNRDGLDAKLFPCQLKQS*FSPVAK Trigger: CTTTGCCACAGGGGAGAACAAGCTCTGTTTTAACTG...ACACGGGAAGAGTTTTGCATCAAGACCATCTCGATTTGTATAATGTCGTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | GTGACCTTACCAAAATCTTTCTATTCTGAACCCTTGCCCATTACACAGATCCATACATTCCAGAGATGCTaGGACACCATGTTGAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: VTLPKSFYSEPLPITQIHTFQRC*DTMLSV Trigger: GACACTCAACATGGTGTCCAAGCATCTCTGGAATGT...ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTTGGTAAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | CTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTCTCTGCCCACATCATTTGCGCTaGAGGGTTGGATTTCACGTT | + |
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Preference number: 5 (lower is better) Translates to: LYWLPGILETSLFYIGLCPHHLR*RVGFHV Trigger: AACGTGAAATCCAACCCTCAAGCGCAAATGATGTGG...GCAGAGACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | GACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATCCTCGGTGTGGTTTaGAACAGCACATTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DSLHLYWLPGILETSLFYILGVV*NSTFQR Trigger: TCTCTGGAATGTGCTGTTCAAAACCACACCGAGGAT...ATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | TTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTACGGTTTGGAAGCCATaGCCACTTAGAAGAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LHLYWLPGILETSLFYIGTVWKP*PLRRGG Trigger: TCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCGT...ACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | TTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCATTGTTCTATATTGGTACATTCCAGAGATGCTaGGACACCATGTTGAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLYWLPGILETSLFYIGTFQRC*DTMLSV Trigger: GACACTCAACATGGTGTCCAAGCATCTCTGGAATGT...ACCAATATAGAACAATGATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTATATTGGTCTCTGCTTCGAGTCTCACCTACTGCACTGATTTAGAGCATTTTATACCACATCATTaGCGCTTGAGGGTTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSILVSASSLTYCTDLEHFIPHH*RLRVGF Trigger: AAATCCAACCCTCAAGCGCAAATGATGTGGTATAAA...ATGCTCTAAATCAGTGCAGTAGGTGAGACTCGAAGCAGAGACCAATATAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | GTGACCTTACCAAAATCTTTCTATTCTGAACCCTTGCCCATTACACAGATCCATCCATTGTCAGATTTCTaGACTTTGGTGATGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: VTLPKSFYSEPLPITQIHPLSDF*TLVMDN Trigger: GTTGTCCATCACCAAAGTCAAGAAATCTGACAATGG...ATGGATCTGTGTAATGGGCAAGGGTTCAGAATAGAAAGATTTTGGTAAGGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | GAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTGGCATCTTAGAAACATCAAAACCAAGGCGCTGTaGTTTTTATACCACATCATT | + |
|
Preference number: 5 (lower is better) Translates to: EHKRQFASLLAPWHLRNIKTKAL*FLYHII Trigger: AATGATGTGGTATAAAAACAACAGCGCCTTGGTTTT...GATGTTTCTAAGATGCCAGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | ATTAATGAGATGACACTGAACACAAGAGACAGTTTGCATCTTTATTGGCTCCCTTTTATACCACATCATTaGCGCTTGAGGGTTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: INEMTLNTRDSLHLYWLPFIPHH*RLRVGF Trigger: AAATCCAACCCTCAAGCGCAAATGATGTGGTATAAA...AGGGAGCCAATAAAGATGCAAACTGTCTCTTGTGTTCAGTGTCATCTCATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | GAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCTCCTTTAGTCCCAAAACAAAAACCAAGGCGCTGTaGTTTTTATACCACATCATT | + |
|
Preference number: 5 (lower is better) Translates to: EGMSYILRLGVPSFSPKTKTKAL*FLYHII Trigger: AATGATGTGGTATAAAAACAACAGCGCCTTGGTTTT...TGTTTTGGGACTAAAGGAGGGAACACCTAATCTCAGAATGTAAGACATTCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS-3UTR CAA 90 bp | ACAAAATTTATTCCACTTGAAGGAATGTCTTACATTCTGAGATTAGGTGTTCCCCCATTGTCAGATTTCTaGACTTTGGTGATGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: TKFIPLEGMSYILRLGVPPLSDF*TLVMDN Trigger: GTTGTCCATCACCAAAGTCAAGAAATCTGACAATGG...GGGAACACCTAATCTCAGAATGTAAGACATTCCTTCAAGTGGAATAAATTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS TCA 72 bp | AAGGTAACGTTCAGCACTACTGTAACGGACACCGTCTaGTCGCGCTGTAGCTTGCAGGTAAAGCGGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KVTFSTTVTDTV*SRCSLQVKRTP Trigger: TGGAGTCCGCTTTACCTGCAAGCTACAGCGCGATCAGACGGTGTCCGTTACAGTAGTGCTGAACGTTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS TCA 72 bp | AAGCAGGTGGAAGTCCATGGTCTCCATTTTCAGAGATaGGCTGGCAATACAGCTGTAGGTCCCATTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KQVEVHGLHFQR*AGNTAVGPIVR Trigger: TCTGACAATGGGACCTACAGCTGTATTGCCAGCTCATCTCTGAAAATGGAGACCATGGACTTCCACCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS CAA 72 bp | CTTACATCGCTGTTTTCCTCCACGGTTTGGAAGCCATaGCCACTTAGAAGAGGAGGAAAGGTAACGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LTSLFSSTVWKP*PLRRGGKVTFS Trigger: GCTGAACGTTACCTTTCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCGTGGAGGAAAACAGCGATGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CAA 90 bp | TCCATCTTCTCTGTACCAGAGAAGTTCTTCATCCTCGGTGTGGTTTaGAACAGCACATTCCAGAGATGCTTGGACACCATGTTGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SIFSVPEKFFILGVV*NSTFQRCLDTMLSV Trigger: GACACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGATGAAGAACTTCTCTGGTACAGAGAAGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS TCA 72 bp | CTGTACCAGAGAAGTTCTTCATCCTCGGTGTGGTTTTaGACAGCACATTCCAGAGATGCTTGGACACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LYQRSSSSSVWF*TAHSRDAWTPC Trigger: ACATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGATGAAGAACTTCTCTGGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CCA 72 bp | GGTGGAAGTCCATGGTCTCCATTTTCAGAGATGAGCTaGCAATACAGCTGTAGGTCCCATTGTCAGATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGSPWSPFSEMS*QYSCRSHCQIS Trigger: AGAAATCTGACAATGGGACCTACAGCTGTATTGCCAGCTCATCTCTGAAAATGGAGACCATGGACTTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS CAA 72 bp | TCTGTACCAGAGAAGTTCTTCATCCTCGGTGTGGTTTaGAACAGCACATTCCAGAGATGCTTGGACACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVPEKFFILGVV*NSTFQRCLDTM Trigger: CATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGATGAAGAACTTCTCTGGTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CAA 90 bp | CAAACCAAACTTACATCGCTGTTTTCCTCCACGGTTTGGAAGCCATaGCCACTTAGAAGAGGAGGAAAGGTAACGTTCAGCACTACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QTKLTSLFSSTVWKP*PLRRGGKVTFSTTV Trigger: TACAGTAGTGCTGAACGTTACCTTTCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCGTGGAGGAAAACAGCGATGTAAGTTTGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS CCA 72 bp | CAAACCAAACTTACATCGCTGTTTTCCTCCACGGTTTaGAAGCCATTGCCACTTAGAAGAGGAGGAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QTKLTSLFSSTV*KPLPLRRGGKV Trigger: TACCTTTCCTCCTCTTCTAAGTGGCAATGGCTTCCAAACCGTGGAGGAAAACAGCGATGTAAGTTTGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS GCA 72 bp | ATCCTCGGTGTGGTTTTGAACAGCACATTCCAGAGATaGTTGGACACCATGTTGAGTGTCCAGAATATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILGVVLNSTFQR*LDTMLSVQNIV Trigger: AACTATATTCTGGACACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAAAACCACACCGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CAA 72 bp | TTGAACAGCACATTCCAGAGATGCTTGGACACCATGTaGAGTGTCCAGAATATAGTTCTCAGTTCTACCATT | + |
|
Preference number: 6 (lower is better) Translates to: LNSTFQRCLDTM*SVQNIVLSSTI Trigger: AATGGTAGAACTGAGAACTATATTCTGGACACTCAACATGGTGTCCAAGCATCTCTGGAATGTGCTGTTCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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| CDS CCA 72 bp | TGTTGTTTTTATACCACATCATTTGCGCTTGAGGGTTaGATTTCACGTTGCAAACCAAACTTACATCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCFYTTSFALEG*ISRCKPNLHRC Trigger: ACAGCGATGTAAGTTTGGTTTGCAACGTGAAATCCAACCCTCAAGCGCAAATGATGTGGTATAAAAACAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 |
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| CDS CAA 90 bp | TCACTTTCGTTGATGGGAGAGACACAAACAGAACTGATGTTGATTTaGTTTCCATTTTTCAGATCTACTATTCCATCTTCTCTGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLMGETQTELMLI*FPFFRSTIPSSLYQ Trigger: CTGGTACAGAGAAGATGGAATAGTAGATCTGAAAAATGGAAACAAAATCAACATCAGTTCTGTTTGTGTCTCTCCCATCAACGAAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072633.4 ENSMUST00000102495.8 ENSMUST00000142166.8 |
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