Pregenerated sensors for TMEM9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031021Ensembl transcript IDs: ENSMUST00000033333.13, ENSMUST00000118571.2, ENSMUST00000128043.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGTGAGGAGCCCCCAGGCATTTCAGATCCAACTGGTCATGAAATaGAGCCACAGGCTAACCAGAATCTTAGGTAATGTAGTCAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: FVRSPQAFQIQLVMK*SHRLTRILGNVVSA Trigger: TGCACTGACTACATTACCTAAGATTCTGGTTAGCCTGTGGCTGCATTTCATGACCAGTTGGATCTGAAATGCCTGGGGGCTCCTCACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR TCA 90 bp | AGTAGAGGGTCTGAAGTATTCATAAGTCTGTCTGGAAAAGACACTTaGGAAGCTACTCAAGCACTCCCAAGGCATCCTTCCTTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SRGSEVFISLSGKDT*EATQALPRHPSFSL Trigger: GAGAGAGAAGGAAGGATGCCTTGGGAGTGCTTGAGTAGCTTCTCAAGTGTCTTTTCCAGACAGACTTATGAATACTTCAGACCCTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CCA 90 bp | AAAAACACACCTGGAAGTTATCTTGAACACCAAGTTAGAACTGTGTaGCAAGAAAGAGAGAGCTTGTTCCAGGCACGGGGCTTCAAGATA | + |
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Preference number: 1 (lower is better) Translates to: KNTPGSYLEHQVRTV*QERESLFQARGFKI Trigger: TATCTTGAAGCCCCGTGCCTGGAACAAGCTCTCTCTTTCTTGCCACACAGTTCTAACTTGGTGTTCAAGATAACTTCCAGGTGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR TCA 90 bp | GTCTTTATTCTAAATGTTCAAGTCCTTAGAGCTACTAGAAGAAGATaGGGAAGACCACACACACTGAGACTGTGTTTAGGTATCAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: VFILNVQVLRATRRR*GRPHTLRLCLGISV Trigger: TACACTGATACCTAAACACAGTCTCAGTGTGTGTGGTCTTCCTCATCTTCTTCTAGTAGCTCTAAGGACTTGAACATTTAGAATAAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAGTCAAGTGGGGAGGCCAGCACGCTGACAAGCCAGCTACACTGGGACATGGTTTGCTTCCAGTTTaGAGTCTTCCTCCATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: AKVKWGGQHADKPATLGHGLLPV*SLPPSS Trigger: GCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACC...ATGTCCCAGTGTAGCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATCCTTCCTTCTCTCTCCCACCACAAGAAAGAGAAGCAAAAACACACCTGGGGTTTGCTTCCAGTTTaGAGTCTTCCTCCATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GILPSLSHHKKEKQKHTWGLLPV*SLPPSS Trigger: GCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACC...CCAGGTGTGTTTTTGCTTCTCTTTCTTGTGGTGGGAGAGAGAAGGAAGGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACACTTGAGAAGCTACTCAAGCACTCCCAAGGCATCCTTCCTTCTCTCTCCTTCTTCCCAGTTGTCTaGGTGTTCTTCCTAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: KTLEKLLKHSQGILPSLSFFPVV*VFFLVT Trigger: GGTGACTAGGAAGAACACGCAGACAACTGGGAAGAA...GGAGAGAGAAGGAAGGATGCCTTGGGAGTGCTTGAGTAGCTTCTCAAGTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGGCAATCTGAACTCTAGTCCTTGTTCAAAGCTGCCCACATCAGTTCAACAACTGGTCATGAAATaGAGCCACAGGCTAACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ERGNLNSSPCSKLPTSVQQLVMK*SHRLTR Trigger: TCTGGTTAGCCTGTGGCTGCATTTCATGACCAGTTG...TTGAACTGATGTGGGCAGCTTTGAACAAGGACTAGAGTTCAGATTGCCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CAA 90 bp | TATCTTGAACACCAAGTTAGAACTGTGTGGCAAGAAAGAGAGAGCTaGTTCCAGGCACGGGGCTTCAAGATAACTCACAGGCAGCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: YLEHQVRTVWQERES*FQARGFKITHRQLN Trigger: ATTAAGCTGCCTGTGAGTTATCTTGAAGCCCCGTGCCTGGAACAAGCTCTCTCTTTCTTGCCACACAGTTCTAACTTGGTGTTCAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAGACTTCTCAGAGAGAGGCAATCTGAACTCTAGTCCTTGTTCAAAGCTGCAACTGGTCATGAAATaGAGCCACAGGCTAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLDFSERGNLNSSPCSKLQLVMK*SHRLTR Trigger: TCTGGTTAGCCTGTGGCTGCATTTCATGACCAGTTG...CAGCTTTGAACAAGGACTAGAGTTCAGATTGCCTCTCTCTGAGAAGTCTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGCCTCTCAGCAAGACAGAAAAGGCTGATCAGTATTTGTACGTCAATCATGCTACTAGAAGAAGATaGGGAAGACCACACACACTG | + |
|
Preference number: 2 (lower is better) Translates to: ELPLSKTEKADQYLYVNHATRRR*GRPHTL Trigger: CAGTGTGTGTGGTCTTCCTCATCTTCTTCTAGTAGC...ATGATTGACGTACAAATACTGATCAGCCTTTTCTGTCTTGCTGAGAGGCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGACTGTGTTTAGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTATTCTTCCCAGTTGTCTaGGTGTTCTTCCTAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: TETVFRYQCKLADGQSVLFFPVV*VFFLVT Trigger: GGTGACTAGGAAGAACACGCAGACAACTGGGAAGAA...TAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCTAAACACAGTCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR TCA 90 bp | GATCAGTATTTGTACGTCAATCATCCAGGGAGGCTTGGGCTTAAGAGAAAATGTTCTGGAAAAGACACTTaGGAAGCTACTCAAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: DQYLYVNHPGRLGLKRKCSGKDT*EATQAL Trigger: GAGTGCTTGAGTAGCTTCTCAAGTGTCTTTTCCAGA...ACATTTTCTCTTAAGCCCAAGCCTCCCTGGATGATTGACGTACAAATACTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGGCAATCTGAACTCTAGTCCTTGTTCAAAGCTGCCCACATCAGTTCAACAAGACAGAAAAGGCTaGTCAGTATTTGTACGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ERGNLNSSPCSKLPTSVQQDRKG*SVFVRQ Trigger: TTGACGTACAAATACTGATCAGCCTTTTCTGTCTTG...TTGAACTGATGTGGGCAGCTTTGAACAAGGACTAGAGTTCAGATTGCCTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAACCAGAATCTTAGGTAATGTAGTCAGTGCAAAAGTCAAGTGGGGAGGCATTCATAAGTCTGTCTaGAAAAGACACTTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RLTRILGNVVSAKVKWGGIHKSV*KRHLRS Trigger: GCTTCTCAAGTGTCTTTTCCAGACAGACTTATGAAT...GCCTCCCCACTTGACTTTTGCACTGACTACATTACCTAAGATTCTGGTTAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTAGAACATGTTGCGTCAATTCATAAGTCTGTCTaGAAAAGACACTTGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RYQCKLADGQSVLEHVASIHKSV*KRHLRS Trigger: GCTTCTCAAGTGTCTTTTCCAGACAGACTTATGAAT...TGACGCAACATGTTCTAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR TCA 72 bp | AGTCAGTGCAAAAGTCAAGTGGGGAGGCCAGCACGCTaGCAAGCCAGCTACACTGGGACATTAACAAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SQCKSQVGRPAR*QASYTGTLTSV Trigger: CACACTTGTTAATGTCCCAGTGTAGCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTGCACTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CCA 72 bp | CCTGGAAGTTATCTTGAACACCAAGTTAGAACTGTGTaGCAAGAAAGAGAGAGCTTGTTCCAGGCACGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PGSYLEHQVRTV*QERESLFQARG Trigger: GCCCCGTGCCTGGAACAAGCTCTCTCTTTCTTGCCACACAGTTCTAACTTGGTGTTCAAGATAACTTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CCA 72 bp | AGAATCTTAGGTAATGTAGTCAGTGCAAAAGTCAAGTaGGGAGGCCAGCACGCTGACAAGCCAGCTACACTG | + |
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Preference number: 3 (lower is better) Translates to: RILGNVVSAKVK*GGQHADKPATL Trigger: CAGTGTAGCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTGCACTGACTACATTACCTAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR GCA 72 bp | AGCCCCCAGGCATTTCAGATCCAACTGGTCATGAAATaGAGCCACAGGCTAACCAGAATCTTAGGTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SPQAFQIQLVMK*SHRLTRILGNV Trigger: TACATTACCTAAGATTCTGGTTAGCCTGTGGCTGCATTTCATGACCAGTTGGATCTGAAATGCCTGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAACCAGAATCTTAGGTAATGTAGTCAGTGCAAAAGTCAAGTGGGGAGGCGAAAAGACTTACTGGTaGACTTGGAACTGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLTRILGNVVSAKVKWGGEKTYW*TWNCVL Trigger: CAGCACACAGTTCCAAGTCAACCAGTAAGTCTTTTC...GCCTCCCCACTTGACTTTTGCACTGACTACATTACCTAAGATTCTGGTTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR TCA 72 bp | CAGACATCACAGTGCATGAAACAAATCTTCATTTTGTaGGGAGCCCCCAGGCATTTCAGATCCAACTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: QTSQCMKQIFIL*GAPRHFRSNWS Trigger: TGACCAGTTGGATCTGAAATGCCTGGGGGCTCCTCACAAAATGAAGATTTGTTTCATGCACTGTGATGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGTGCAAAAGTCAAGTGGGGAGGCCAGCACGCTGACAAGCCAGCTACAGACTTTCGCTGCTCCTaGACCTGGAGCTTCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VVSAKVKWGGQHADKPATDFRCS*TWSFQR Trigger: GCGCTGGAAGCTCCAGGTCCAGGAGCAGCGAAAGTC...TGTAGCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTGCACTGACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | AGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTAGAACATGTTGCGTCAGCGGCGCCTGTCAGCTaGGCGAGCAGCAGCACCGAC | + |
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Preference number: 4 (lower is better) Translates to: RYQCKLADGQSVLEHVASAAPVS*ASSSTD Trigger: GTCGGTGCTGCTGCTCGCGCAGCTGACAGGCGCCGC...TGACGCAACATGTTCTAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS-3UTR TCA 90 bp | GAACTGCCTCTCAGCAAGACAGAAAAGGCTGATCAGTATTTGTACGTCAATCATCCAGGCAGGACATGCTaGGCCCCGAGCCCAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: ELPLSKTEKADQYLYVNHPGRTC*APSPAA Trigger: TGCGGCTGGGCTCGGGGCTCAGCATGTCCTGCCTGG...ATGATTGACGTACAAATACTGATCAGCCTTTTCTGTCTTGCTGAGAGGCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS-3UTR CCA 90 bp | CATTTTGTGAGGAGCCCCCAGGCATTTCAGATCCAACTGGTCATGAAATGCAGCCGGGCCAGCACATCATaGGCATTTGCAAAAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HFVRSPQAFQIQLVMKCSRASTS*AFAKGW Trigger: CCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCG...GCTGCATTTCATGACCAGTTGGATCTGAAATGCCTGGGGGCTCCTCACAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CCA 90 bp | AGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTAGAACATGTTGCGTCAGACTTTCGCTGCTCCTaGACCTGGAGCTTCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RYQCKLADGQSVLEHVASDFRCS*TWSFQR Trigger: GCGCTGGAAGCTCCAGGTCCAGGAGCAGCGAAAGTC...TGACGCAACATGTTCTAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CCA 90 bp | GGGGTTTGCTTCCAGTTTGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAAACCGGGCCAGCACATCATaGGCATTTGCAAAAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GVCFQFGVFLHPARICKNRASTS*AFAKGW Trigger: CCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCG...GTTTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | CAAAAGTCAAGTGGGGAGGCCAGCACGCTGACAAGCCAGCTACACTGGGACATTTTCTCTCTTCGTATTTaGATTCACAGCGTAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: QKSSGEASTLTSQLHWDIFSLRI*IHSVDS Trigger: ACTGTCTACGCTGTGAATGCAAATACGAAGAGAGAA...AATGTCCCAGTGTAGCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | GGGGTTTGCTTCCAGTTTGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAAACAAGACAGACTTTCGCTaGTCCTGGACCTGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GVCFQFGVFLHPARICKNKTDFR*SWTWSF Trigger: GAAGCTCCAGGTCCAGGAGCAGCGAAAGTCTGTCTT...GTTTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | GAACTGCCTCTCAGCAAGACAGAAAAGGCTGATCAGTATTTGTACGTCAATCATACGTCATCATCGCTCTaGAACAGCTGGGAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ELPLSKTEKADQYLYVNHTSSSL*NSWECP Trigger: TGGACACTCCCAGCTGTTGCAGAGCGATGATGACGT...ATGATTGACGTACAAATACTGATCAGCCTTTTCTGTCTTGCTGAGAGGCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGTTTGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAAACAAACATGAAGACAGACTTTCGCTaGTCCTGGACCTGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASSLESSSIQQGFVKTNMKTDFR*SWTWSF Trigger: GAAGCTCCAGGTCCAGGAGCAGCGAAAGTCTGTCTT...CATGTTTGTTTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAAACTGGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | GAACTGCCTCTCAGCAAGACAGAAAAGGCTGATCAGTATTTGTACGTCAATCATCACATCATGGGCATTTaGAAAAGGCTGGTGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: ELPLSKTEKADQYLYVNHHIMGI*KRLVIP Trigger: GGGGATCACCAGCCTTTTGCAAATGCCCATGATGTG...ATGATTGACGTACAAATACTGATCAGCCTTTTCTGTCTTGCTGAGAGGCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CAA 72 bp | AACAGGAAAATACCAAGCATGGGGTTTGCTTCCAGTTaGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: NRKIPSMGFASS*ESSSIQQGFVK Trigger: TTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACCCCATGCTTGGTATTTTCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | AGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTAGAACATGTTGCGTCATATAGGGAGGGCAGATaGATTTACATCTCACATCTT | + |
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Preference number: 4 (lower is better) Translates to: RYQCKLADGQSVLEHVASYREGR*IYISHL Trigger: AAGATGTGAGATGTAAATGCATCTGCCCTCCCTATA...TGACGCAACATGTTCTAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS-3UTR TCA 90 bp | TTGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAAACAAACATGGCATTAAAAATGGGCTCCACGACATaGAGGCAATCACAATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LESSSIQQGFVKTNMALKMGSTT*RQSQSF Trigger: GAAAGATTGTGATTGCCTTCATGTCGTGGAGCCCAT...TTTTAATGCCATGTTTGTTTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS-3UTR GCA 90 bp | ACTGAGACTGTGTTTAGGTATCAGTGTAAACTAGCAGATGGCCAGTCTGTTCTATTCTCTCTTCGTATTTaGATTCACAGCGTAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: TETVFRYQCKLADGQSVLFSLRI*IHSVDS Trigger: ACTGTCTACGCTGTGAATGCAAATACGAAGAGAGAA...TAGAACAGACTGGCCATCTGCTAGTTTACACTGATACCTAAACACAGTCTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR GCA 90 bp | TCTATTAATATATTAACAGGAAAATACCAAGCATGGGGTTTGCTTCCAGTTTGGCACATCATGGGCATTTaGAAAAGGCTGGTGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SINILTGKYQAWGLLPVWHIMGI*KRLVIP Trigger: GGGGATCACCAGCCTTTTGCAAATGCCCATGATGTG...CCAAACTGGAAGCAAACCCCATGCTTGGTATTTTCCTGTTAATATATTAATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CAA 72 bp | ATTAATATATTAACAGGAAAATACCAAGCATGGGGTTaGCTTCCAGTTTGGAGTCTTCCTCCATCCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: INILTGKYQAWG*LPVWSLPPSSK Trigger: CTTGCTGGATGGAGGAAGACTCCAAACTGGAAGCAAACCCCATGCTTGGTATTTTCCTGTTAATATATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| 3UTR CAA 72 bp | CTGATCAGTATTTGTACGTCAATCATCCAGGGAGGCTaGGGCTTAAGAGAAAATGTCTTTATTCTAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: LISICTSIIQGG*GLRENVFILNV Trigger: AACATTTAGAATAAAGACATTTTCTCTTAAGCCCAAGCCTCCCTGGATGATTGACGTACAAATACTGATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS TCA 90 bp | CTGCGAGAGCGGGCCAGCACATCATGGGCATTTGCAAAAGGCTGGTaGTCCCCAACGTCATCATCGCTCTGCAACAGCTGGGAGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRERASTSWAFAKGW*SPTSSSLCNSWECP Trigger: TGGACACTCCCAGCTGTTGCAGAGCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS GCA 90 bp | CATTTACATCTCACATCTTCAAAATTCTTGGCGGCGCCTGTCAGCTaGGCGAGCAGCAGCACCGACAGCGCCAGGCAGGACATGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: HLHLTSSKFLAAPVS*ASSSTDSARQDMLS Trigger: GCTCAGCATGTCCTGCCTGGCGCTGTCGGTGCTGCTGCTCGCGCAGCTGACAGGCGCCGCCAAGAATTTTGAAGATGTGAGATGTAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS CCA 90 bp | GGAGCTTCCAGCGCTGCTGAGCGTACTCCACCTTGTTTAGAACATTaGCTCGGCTGCGAGAGCGGGCCAGCACATCATGGGCATTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: GASSAAERTPPCLEH*LGCESGPAHHGHLQ Trigger: TTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAGCCGAGCCAATGTTCTAAACAAGGTGGAGTACGCTCAGCAGCGCTGGAAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS GCA 90 bp | AACATTGGCTCGGCTGCGAGAGCGGGCCAGCACATCATGGGCATTTaGAAAAGGCTGGTGATCCCCAACGTCATCATCGCTCTGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: NIGSAARAGQHIMGI*KRLVIPNVIIALQQ Trigger: CTGTTGCAGAGCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAGCCGAGCCAATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS GCA 90 bp | AGCGCTGCTGAGCGTACTCCACCTTGTTTAGAACATTGGCTCGGCTaGGAGAGCGGGCCAGCACATCATGGGCATTTGCAAAAGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SAAERTPPCLEHWLG*ESGPAHHGHLQKAG Trigger: ACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAGCCGAGCCAATGTTCTAAACAAGGTGGAGTACGCTCAGCAGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CAA 90 bp | TGTGAGGAGCCCCCAGGCATTTCAGATCCAACTGGTCATGAAATGCAGCCACAGCTTCTCTCTTCGTATTaGCATTCACAGCGTAGACAG | + |
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Preference number: 5 (lower is better) Translates to: CEEPPGISDPTGHEMQPQLLSSY*HSQRRQ Trigger: CTGTCTACGCTGTGAATGCAAATACGAAGAGAGAAG...CTGTGGCTGCATTTCATGACCAGTTGGATCTGAAATGCCTGGGGGCTCCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CAA 90 bp | GCAAGAAAGAGAGAGCTTGTTCCAGGCACGGGGCTTCAAGATAACTCACAGGCACTTCTCTCTTCGTATTaGCATTCACAGCGTAGACAG | + |
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Preference number: 5 (lower is better) Translates to: ARKRELVPGTGLQDNSQALLSSY*HSQRRQ Trigger: CTGTCTACGCTGTGAATGCAAATACGAAGAGAGAAG...TGCCTGTGAGTTATCTTGAAGCCCCGTGCCTGGAACAAGCTCTCTCTTTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS GCA 90 bp | TCTTATTATAAATGTGCCCAGGATTCTCTTTATAGGGAGGGCAGATaGATTTACATCTCACATCTTCAAAATTCTTGGCGGCGCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SYYKCAQDSLYREGR*IYISHLQNSWRRLS Trigger: TGACAGGCGCCGCCAAGAATTTTGAAGATGTGAGATGTAAATGCATCTGCCCTCCCTATAAAGAGAATCCTGGGCACATTTATAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS-3UTR CAA 90 bp | AGGCTAACCAGAATCTTAGGTAATGTAGTCAGTGCAAAAGTCAAGTGGGGAGGCATTATAATGGTAACCTaGATTGTGACAGAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RLTRILGNVVSAKVKWGGIIMVT*IVTELL Trigger: GAGAAGCTCTGTCACAATCAAGGTTACCATTATAAT...GCCTCCCCACTTGACTTTTGCACTGACTACATTACCTAAGATTCTGGTTAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CAA 90 bp | TCTATTAATATATTAACAGGAAAATACCAAGCATGGGGTTTGCTTCCAGTTTGGGCACATCATGGGCATTaGCAAAAGGCTGGTGATCCC | + |
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Preference number: 5 (lower is better) Translates to: SINILTGKYQAWGLLPVWAHHGH*QKAGDP Trigger: GGGATCACCAGCCTTTTGCAAATGCCCATGATGTGC...CCAAACTGGAAGCAAACCCCATGCTTGGTATTTTCCTGTTAATATATTAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGTCTTCCTCCATCCAGCAAGGATTTGTAAAAACAAACATGGCATTAAAAATTATAATGGTAACCTaGATTGTGACAGAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LESSSIQQGFVKTNMALKIIMVT*IVTELL Trigger: GAGAAGCTCTGTCACAATCAAGGTTACCATTATAAT...TTTTAATGCCATGTTTGTTTTTACAAATCCTTGCTGGATGGAGGAAGACTCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS TCA 72 bp | CGAGCAGCAGCACCGACAGCGCCAGGCAGGACATGCTaGGCCCCGAGCCCAGCCGCAGCAGGTTTCCGCACC | + |
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Preference number: 6 (lower is better) Translates to: RAAAPTAPGRTC*APSPAAAGFRT Trigger: GGTGCGGAAACCTGCTGCGGCTGGGCTCGGGGCTCAGCATGTCCTGCCTGGCGCTGTCGGTGCTGCTGCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000128043.2 |
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| CDS CAA 72 bp | CTCGGCTGCGAGAGCGGGCCAGCACATCATGGGCATTaGCAAAAGGCTGGTGATCCCCAACGTCATCATCGC | + |
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Preference number: 6 (lower is better) Translates to: LGCESGPAHHGH*QKAGDPQRHHR Trigger: GCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAGCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS CAA 90 bp | GAACATTGGCTCGGCTGCGAGAGCGGGCCAGCACATCATGGGCATTaGCAAAAGGCTGGTGATCCCCAACGTCATCATCGCTCTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: EHWLGCESGPAHHGH*QKAGDPQRHHRSAT Trigger: TGTTGCAGAGCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTCGCAGCCGAGCCAATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS TCA 72 bp | CGGGCCAGCACATCATGGGCATTTGCAAAAGGCTGGTaGTCCCCAACGTCATCATCGCTCTGCAACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RASTSWAFAKGW*SPTSSSLCNSW Trigger: CCAGCTGTTGCAGAGCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS CCA 72 bp | GACAGTATGCTTCTACATCAGGTCCCCGTACAGGCATaGGCTCCACGACATGAAGGCAATCACAATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DSMLLHQVPVQA*APRHEGNHNLS Trigger: AGAAAGATTGTGATTGCCTTCATGTCGTGGAGCCCATGCCTGTACGGGGACCTGATGTAGAAGCATACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000128043.2 |
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| CDS GCA 72 bp | AAATGTGCCCAGGATTCTCTTTATAGGGAGGGCAGATaGATTTACATCTCACATCTTCAAAATTCTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: KCAQDSLYREGR*IYISHLQNSWR Trigger: CCGCCAAGAATTTTGAAGATGTGAGATGTAAATGCATCTGCCCTCCCTATAAAGAGAATCCTGGGCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033333.13 |
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| CDS CAA 90 bp | ATTATAATGGTAACCTTGATTGTGACAGAGCTTCTCTCTTCGTATTaGCATTCACAGCGTAGACAGTATGCTTCTACATCAGGTCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: IIMVTLIVTELLSSY*HSQRRQYASTSGPR Trigger: ACGGGGACCTGATGTAGAAGCATACTGTCTACGCTGTGAATGCAAATACGAAGAGAGAAGCTCTGTCACAATCAAGGTTACCATTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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| CDS CAA 72 bp | GTAACCTTGATTGTGACAGAGCTTCTCTCTTCGTATTaGCATTCACAGCGTAGACAGTATGCTTCTACATCA | + |
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Preference number: 6 (lower is better) Translates to: VTLIVTELLSSY*HSQRRQYASTS Trigger: TGATGTAGAAGCATACTGTCTACGCTGTGAATGCAAATACGAAGAGAGAAGCTCTGTCACAATCAAGGTTAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033333.13 ENSMUST00000118571.2 |
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