Pregenerated sensors for TMEM97 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037278Ensembl transcript IDs: ENSMUST00000103242.5
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCACCTTCCTTCCCTGTAACCCATTTCTGGCTTGGACTCATGTaGGGCTATAATATATTTTTCTCCCAGAGGTGGAGGTGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EAPSFPVTHFWLGLM*GYNIFFSQRWRCGQ Trigger: CTGCCCACACCTCCACCTCTGGGAGAAAAATATATTATAGCCTCACATGAGTCCAAGCCAGAAATGGGTTACAGGGAAGGAAGGTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR GCA 90 bp | TTTATTTGGACCAGACACATAAGTAACAACCACAGCAACATGGCTTaGAAGCAGAGCCAGCACTGTCTAGCACCCACCGGGTTTTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: FIWTRHISNNHSNMA*KQSQHCLAPTGFCF Trigger: GAAACAAAACCCGGTGGGTGCTAGACAGTGCTGGCTCTGCTTGCAAGCCATGTTGCTGTGGTTGTTACTTATGTGTCTGGTCCAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR GCA 90 bp | TGTGGGCAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTaGTCATTTGTTGACTATCAAGGTCGAGGTGAGGACTTGGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CGQETMLKSAKETKY*SFVDYQGRGEDLVR Trigger: CCTGACCAAGTCCTCACCTCGACCTTGATAGTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTGCCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR TCA 90 bp | ACTATCAAGGTCGAGGTGAGGACTTGGTCAGGTGTGTGCATTCCAGGTCAGGAGACCCCTGCTGAAAGGTaGAGGCCTGGCACGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TIKVEVRTWSGVCIPGQETPAER*RPGTSP Trigger: GGGAGACGTGCCAGGCCTTCACCTTTCAGCAGGGGT...CTCCTGACCTGGAATGCACACACCTGACCAAGTCCTCACCTCGACCTTGATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGGCTATCTGTTCAAGATAGAAATGGAGGCACCTTCCTTCCCTGTAACAAGGCAACTGTGCTGTaGGGTCTTCCCCACCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSRLSVQDRNGGTFLPCNKATVL*GLPHQA Trigger: AGCCTGGTGGGGAAGACCCCACAGCACAGTTGCCTT...GTTACAGGGAAGGAAGGTGCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR CAA 90 bp | ACAAAATACTGCTCATTTGTTGACTATCAAGGTCGAGGTGAGGACTaGGTCAGGTGTGTGCATTCCAGGTCAGGAGCTAACCGGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: TKYCSFVDYQGRGED*VRCVHSRSGANRLP Trigger: GGGAAGCCGGTTAGCTCCTGACCTGGAATGCACACACCTGACCAAGTCCTCACCTCGACCTTGATAGTCAACAAATGAGCAGTATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGGCTATCTGTTCAAGATAGAAATGGAGGCACCTTCCTTCCCTGTAACGCTGTGGTAGCGCTTTaGCACCATTTTGCTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: QSRLSVQDRNGGTFLPCNAVVAL*HHFAVT Trigger: AGTTACAGCAAAATGGTGCCAAAGCGCTACCACAGC...GTTACAGGGAAGGAAGGTGCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTATTTGGACCAGACACATAAGTAACAACCACAGCAACATGGCTTGCAAGCCAGAGGTGGAGGTGTaGGCAGGAAACCATGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: AFIWTRHISNNHSNMACKPEVEV*AGNHVK Trigger: TTTAACATGGTTTCCTGCCCACACCTCCACCTCTGG...CTTGCAAGCCATGTTGCTGTGGTTGTTACTTATGTGTCTGGTCCAAATAAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCAGGCTATCTGTTCAAGATAGAAATGGAGGCACCTTCCTTCCCTGTAACTGGCTTGGACTCATGTaGGGCTATAATATATTTTTC | + |
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Preference number: 2 (lower is better) Translates to: QSRLSVQDRNGGTFLPCNWLGLM*GYNIFF Trigger: GAAAAATATATTATAGCCTCACATGAGTCCAAGCCA...GTTACAGGGAAGGAAGGTGCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTGCTCATTTGTTGACCTGCTGAAACATGTTTaGGGCAGTTTTCCTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QETMLKSAKETKYCSFVDLLKHV*GSFPVL Trigger: CAACACAGGAAAACTGCCCCAAACATGTTTCAGCAG...GTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTGCTCATTTGTTGACTGTTTCAAATGCTGCTaGAACATGTTTGGGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QETMLKSAKETKYCSFVDCFKCC*NMFGAV Trigger: AACTGCCCCAAACATGTTTCAGCAGCATTTGAAACA...GTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTGCTCATTTGTTGACCTTGTTTGTATGCACTaGTGTTGGTGTTTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: QETMLKSAKETKYCSFVDLVCMH*CWCFKC Trigger: GCATTTGAAACACCAACAGCAGTGCATACAAACAAG...GTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR GCA 72 bp | ACAAGCCTGCGTACTAGGAAGCCCAGTGGGGTGAGGTaGCAGAGTAGGGACATGAGAGCCGTTCATAGAACC | + |
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Preference number: 3 (lower is better) Translates to: TSLRTRKPSGVR*QSRDMRAVHRT Trigger: GGTTCTATGAACGGCTCTCATGTCCCTACTCTGGCACCTCACCCCACTGGGCTTCCTAGTACGCAGGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR TCA 72 bp | TGGCACCATTTTGCTGTAACTTGGTCACACCCCTGCTaGAAGGTGAAGGCCTGGCACGTCTCCCACCACTGT | + |
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Preference number: 3 (lower is better) Translates to: WHHFAVTWSHPC*KVKAWHVSHHC Trigger: ACAGTGGTGGGAGACGTGCCAGGCCTTCACCTTTCAGCAGGGGTGTGACCAAGTTACAGCAAAATGGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGACATGAGAGCCGTTCATAGAACCAGCACCAGAATAACCCAGAGCAGGCTAGGCAGTTTTCCTGTGTaGTCCAAAAGGCAACTGTGC | + |
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Preference number: 3 (lower is better) Translates to: RDMRAVHRTSTRITQSRLGSFPV*SKRQLC Trigger: GCACAGTTGCCTTTTGGACAACACAGGAAAACTGCC...TAGCCTGCTCTGGGTTATTCTGGTGCTGGTTCTATGAACGGCTCTCATGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR GCA 72 bp | AGGCCTGGCACGTCTCCCACCACTGTCTTGTTTGTATaGACTGCTGTTGGTGTTTCAAATGCTGCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RPGTSPTTVLFV*TAVGVSNAAET Trigger: TGTTTCAGCAGCATTTGAAACACCAACAGCAGTGCATACAAACAAGACAGTGGTGGGAGACGTGCCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTATTTGGACCAGACACATAAGTAACAACCACAGCAACATGGCTTGCAAGCCATTTTGCTGTAACTaGGTCACACCCCTGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: AFIWTRHISNNHSNMACKPFCCN*VTPLLK Trigger: TTTCAGCAGGGGTGTGACCAAGTTACAGCAAAATGG...CTTGCAAGCCATGTTGCTGTGGTTGTTACTTATGTGTCTGGTCCAAATAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR TCA 72 bp | TCCTTCCCTGTAACCCATTTCTGGCTTGGACTCATGTaGGGCTATAATATATTTTTCTCCCAGAGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SFPVTHFWLGLM*GYNIFFSQRWR Trigger: CCTCCACCTCTGGGAGAAAAATATATTATAGCCTCACATGAGTCCAAGCCAGAAATGGGTTACAGGGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CAA 90 bp | AAGAGACAAAATACTGCTCATTTGTTGACTATCAAGGTCGAGGTGAGGACTTGGGCTGCTGAAACATGTTaGGGGCAGTTTTCCTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: KRQNTAHLLTIKVEVRTWAAETC*GQFSCV Trigger: AACACAGGAAAACTGCCCCAAACATGTTTCAGCAGC...CCAAGTCCTCACCTCGACCTTGATAGTCAACAAATGAGCAGTATTTTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTGCTCATTTGTTGACTTGTATGCACTGCTGTaGGTGTTTCAAATGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QETMLKSAKETKYCSFVDLYALL*VFQMLL Trigger: CAGCAGCATTTGAAACACCAACAGCAGTGCATACAA...GTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR GCA 72 bp | GAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTaGTCATTTGTTGACTATCAAGGTCGAGGTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ETMLKSAKETKY*SFVDYQGRGED Trigger: GTCCTCACCTCGACCTTGATAGTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR TCA 90 bp | CCAGGTCAGGAGCTAACCGGCTTCCCACCTGGCCTTTTTAGCAGTGCTGTGGTAACCGGCAGCTTCCTTTaGAGAAGGCATATGCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: PGQELTGFPPGLFSSAVVTGSFL*RRHMPQ Trigger: TTGCGGCATATGCCTTCTTCAAAGGAAGCTGCCGGT...TACCACAGCACTGCTAAAAAGGCCAGGTGGGAAGCCGGTTAGCTCCTGACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR TCA 90 bp | AGTAGGGACATGAGAGCCGTTCATAGAACCAGCACCAGAATAACCCAGAGCAGGAGAGCAGGAAGGACTTaGACCACACTGGGGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRDMRAVHRTSTRITQSRRAGRT*TTLGAP Trigger: AGGAGCCCCCAGTGTGGTTCAAGTCCTTCCTGCTCT...CCTGCTCTGGGTTATTCTGGTGCTGGTTCTATGAACGGCTCTCATGTCCCTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR CAA 72 bp | TGCTGTGGTAGCGCTTTGGCACCATTTTGCTGTAACTaGGTCACACCCCTGCTGAAAGGTGAAGGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CCGSALAPFCCN*VTPLLKGEGLA Trigger: TGCCAGGCCTTCACCTTTCAGCAGGGGTGTGACCAAGTTACAGCAAAATGGTGCCAAAGCGCTACCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| 3UTR CAA 72 bp | GGTGAAGGCCTGGCACGTCTCCCACCACTGTCTTGTTaGTATGCACTGCTGTTGGTGTTTCAAATGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GEGLARLPPLSC*YALLLVFQMLL Trigger: CAGCAGCATTTGAAACACCAACAGCAGTGCATACAAACAAGACAGTGGTGGGAGACGTGCCAGGCCTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGGCTATCTGTTCAAGATAGAAATGGAGGCACCTTCCTTCCCTGTAACACCGCAACAGGTTGCTaGACTCCTGCGGGTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: QSRLSVQDRNGGTFLPCNTATGC*TPAGIV Trigger: AACTATACCCGCAGGAGTTCAGCAACCTGTTGCGGT...GTTACAGGGAAGGAAGGTGCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR GCA 90 bp | TATCAAGGTCGAGGTGAGGACTTGGTCAGGTGTGTGCATTCCAGGTCAGGAGCTCGTTATGGTGTGAGCTaGATAGATGATTGCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: YQGRGEDLVRCVHSRSGARYGVS*IDDCRD Trigger: ATCCCTGCAATCATCTATGCAGCTCACACCATAACG...AGCTCCTGACCTGGAATGCACACACCTGACCAAGTCCTCACCTCGACCTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGGCTATCTGTTCAAGATAGAAATGGAGGCACCTTCCTTCCCTGTAACGCATCAGAGGGTCTTTaGACTCCTTTGAGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: QSRLSVQDRNGGTFLPCNASEGL*TPLSTT Trigger: GGTGGTACTCAAAGGAGTTCAAAGACCCTCTGATGC...GTTACAGGGAAGGAAGGTGCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR CAA 90 bp | CGTACTAGGAAGCCCAGTGGGGTGAGGTGCCAGAGTAGGGACATGAGAGCCGTTCAGAGCAGGAAGGACTaGAACCACACTGGGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RTRKPSGVRCQSRDMRAVQSRKD*NHTGGS Trigger: GGAGCCCCCAGTGTGGTTCAAGTCCTTCCTGCTCTG...AACGGCTCTCATGTCCCTACTCTGGCACCTCACCCCACTGGGCTTCCTAGTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGGAGCTAACCGGCTTCCCACCTGGCCTTTTTAGCAGTGCTGTGGTAGAAACTCTCGGGTCTTaGTCCCTTGAAAGCAACGGC | + |
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Preference number: 5 (lower is better) Translates to: PGQELTGFPPGLFSSAVVETLGS*SLESNG Trigger: GCCGTTGCTTTCAAGGGACAAAGACCCGAGAGTTTC...TACCACAGCACTGCTAAAAAGGCCAGGTGGGAAGCCGGTTAGCTCCTGACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS GCA 90 bp | ACAAGCTCACAGAGCAGGAAGGACTTGAACCACACTGGGGGCTCCTaGATCAGAGGGTCTTTGAACTCCTTTGAGTACCACCGCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: TSSQSRKDLNHTGGS*IRGSLNSFEYHRNR Trigger: CCTGTTGCGGTGGTACTCAAAGGAGTTCAAAGACCCTCTGATGCAGGAGCCCCCAGTGTGGTTCAAGTCCTTCCTGCTCTGTGAGCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS-3UTR CAA 90 bp | CAGGAAACCATGTTAAAAAGTGCTAAAGAGACAAAATACTGCTCATTTGTTGACCACCGGCAGCTTCCTTaGAAGAAGGCATATGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: QETMLKSAKETKYCSFVDHRQLP*KKAYAA Trigger: TGCGGCATATGCCTTCTTCAAAGGAAGCTGCCGGTG...GTCAACAAATGAGCAGTATTTTGTCTCTTTAGCACTTTTTAACATGGTTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS CAA 72 bp | GGGTCTTTGAACTCCTTTGAGTACCACCGCAACAGGTaGCTGAACTCCTGCGGGTATAGTTCGGGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSLNSFEYHRNR*LNSCGYSSGGS Trigger: GCTGCCGCCCGAACTATACCCGCAGGAGTTCAGCAACCTGTTGCGGTGGTACTCAAAGGAGTTCAAAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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| CDS CAA 90 bp | AGGAAGGACTTGAACCACACTGGGGGCTCCTGCATCAGAGGGTCTTaGAACTCCTTTGAGTACCACCGCAACAGGTTGCTGAACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RKDLNHTGGSCIRGS*NSFEYHRNRLLNSC Trigger: GCAGGAGTTCAGCAACCTGTTGCGGTGGTACTCAAAGGAGTTCAAAGACCCTCTGATGCAGGAGCCCCCAGTGTGGTTCAAGTCCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103242.5 |
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